Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0006377

Physical Location & Seq

Genomic Coordinates Reverse (-)

5710433 .. 5714707

Gene Structure 4275 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1083600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2604 bp

ATGGAGGTTGTGAAAACTGCAGAAGTAACGCCTCCTCCAGAATCTTCTTCGTCCTCCAACCGTAATCAACAATCCGCCGGGGATGCTCCTGCAAATTCAGAAAAGCATGACAGAGTTGAAAGTAACAGTCCTTTGCCAACGATGGACAACCCTAGATTAGAAACTACACTAAGTTCTTCTGATGGGAGACCCTCTCTGGAACAAAATCAACCACTTCCAACAGATAATCCGGCTTCTAGCTCATCAGCGATGGAAAATGGTAAATTGCCAGCTGCAGAACATGCTTCAAATAGCACATCTCCAGAACAAAGTCAACTTCTTCCAACAGATACCCCACCCTCAATCGCTACAGTCACAGAGAAAGATACGGAGGATAGTTCGGTGGAAGGTCTGGGTCCCAAAAGTGTCGATAATGTTTCAAATAGTGCATCTCAGGAACAAAATCAACTTCATCCAACAGATACTCCAGCGTCAGCCTCAGTAAGTACGGTCAATAAAACAGAGACAGATGTTCAGGGTACCACGGCAGTAGATTCTGGTCCTAAAAATGCTGACAAGGTAGTGCAACCCACAACACGTTCTCTACCCAATATAAAAGTTTCCCGAATTGCTGTTAAACAAGCTGAAGCCATTTATTCTCCTAAGAGTGCTAAGCTGGCATATGTGAACAATGTAGTCTCATCACCCAATGCAAAGTTTGCTAGCTTCTCTGCAAGAAAATCAGTCGTCACTGATTCCCCTAAGAGTGCTAAGAACAGAGGCCTTATTGATACAACTGCACCTTTTGAATCAGTTAAAGAAGCTGTTTCCAAATTTGGAGGAATTGTTGATTGGAAAGCCCATAGAATCCAAACCGTGGAGAGACGCAAGATTGTGGAGCAAGAACTTGAGAAAGCACAGGAGGAGATTCCTGAGTATAGGAAACAATCAGAGGGTGCCGAAAATGCAAAGGTTCAAGTATTGAAGGAGCTGGATAGCACTAAGAGACTCGTAGAAGAATTGAAGCTCAACCTGGAGAGAGCACAAACAGAAGAACAACAGGCAAAACAAGACTCCGAACTTGCCAAACTAAGGGTGGAAGAGATGGAGCAAGGTATAGCTGACGAGGCTAGTGTTGCAGCCAAGGCACAGCTTGAGGTTGCTAAGGCGAGGCATACAGCTGCGGTGACAGAGCTGAAATCCGTTAAAGAGGAGCTGGAAGCGCTGTACAAGGAATATGCTTCTTTAGTCACTGAGAAAGATACAGCCATTAAAAAAGCTGAAGAGGCCATTTCTGCATCCAAGGAAGTGGAGAAAACAGTGGAAGAACTGACGATTGAGCTAATTGCCACAAAGGAGTCATTAGAGGCTGCGCATGCCGCTCATTTGGAAGCTGAGGAACAAAGGATTGGAGCAGTCATGGCCAAGGAACAAGATTCGCTTCATTGGGAGAAGGAGTTAAAGCAGGCAGAAGAGGAGCTTCAGAAACTTAACCACCAAATTATGTCGGCTGAGGATCTCAAGTCAAAACTCAACACAGCCTCAGCCTTACTACTTGATTTGAAATCTGAATTAGCTGCATATATGGAATCAAGATTAAAGGTGGAAAATGGAGGAGTCTTGAAAGATGGGCTACAGGAACCAGAGAAGAAAACTCATACCGATATACAAGCAGCAGTTGCTTCTGCAAAGAAGGAGCTGGAGGAAGTGAAGCTCAACATAGAGAAAGCAGTTGCTGAAGTAAATATCTTGAAGGTGGCTGCCACATCATTAAAATCGGAACTTGAAAGTGAGAAGTCAGCTCTTGCCACCATTAGGCAGAGAGAAGGAATGGCATCAGTGGCTGTTGCGTCTCTTGAAGCTGACCTGGAGAAGACTAGGTCGGAAATAGCTCTAGTTCAGATGAAGGAGAAAGAAGCCAGAGAGAAGATGATTGAGCTGCCCAAAGAATTACAGCAAGCAGCACAAGAGGCTGACCAGGCAAAGGTACTTTCTGAAATGGCTGGTGAAGAGCTGCGCAAGGCAAGGGAAGGAGCAGAGCAAGCAAAGGCTGGAGCAAGTACTGTGGAAAGTAGATTACTCGCGGCGCAAAAGGAAATAGAGGCTGCTAGGGCCTCCGAGAAGTTGGCGTTAGCAGCAATTAAAGCTTTGCAAGAGAGTGAACAAGCCAGAAGCACCAATGATACTGATTCACCCGCTGGGGTAACTCTTTCTGTAGCAGAGTATTATGAGCTCAGCAAACGGGCCCATGATGCAGAAGAACAGGCGAACGCGAGAGTTGTAGCTGCAAGTTCCCAAATCGAGGAGTTGAGAAAGTGGAGGGCCGAACATGAGCAACGGCGAAAGCTTGGTGAACCTGCTCAGGCAGCAACAACTGCCACTAAAAGCCCGAGGGCCAGTTTTGAGGCAAGGAAAGAATCCAAGGACTTTGACCGCGCACCTGATTCTGCCGCATCTGAGCAATATTCATCAAGCCCCAAGTATGGACTTGGAAGCCCCATGGAAGCTGGTCCATCACCCCCAGAAGTAAAGCAGGGAAAGAAGAAAAAGAAGTCGTTCTTCCCACGGATATTTATGTTCTTGGCCAGAAGAAGGGCGCATCAAAACAAGTTAAATAACTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006996 GO:0008150 GO:0009657 GO:0009658 GO:0009902 GO:0009903 GO:0009904 GO:0009987 GO:0016020 GO:0016043 GO:0019750 GO:0044424 GO:0044444 GO:0044464 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051644 GO:0051649 GO:0051656 GO:0051667 GO:0071840 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WEMBL

Protein Analysis

868

Amino Acids

94.46

Weight (kDa)

5.4

Isoelectric Point (pI)

53.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WEMBL	PF05701	253 - 765	3e-228	Weak chloroplast movement under blue light

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0006377)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G26570 AT2G26570
fragaria_vesca	FvH4_2g34472 FvH4_2g34472 FvH4_2g34472 FvH4_2g34472 FvH4_2g34472 FvH4_2g34472 FvH4_2g34472
malus_domestica	MD08G1102100.v1.1 MD15G1083600.v1.1
prunus_persica	Prupe.1G436100_v2.0.a1 Prupe.1G436100_v2.0.a1 Prupe.1G436100_v2.0.a1
pyrus_communis	pycom15g07820
rosa_chinensis	RchiOBHm_Chr6g0307881
rosa_laevigata	RLG00000010691
rosa_multiflora	Rmu_sc0009398.1_g000001
rosa_roxburghii	Rroxscaffold_7G00160800
rosa_rugosa	Rorug06G0361400 Rorug06G0361400 Rorug06G0361400
rosa_samantha	Rh6AG470400 Rh6BG481400 Rh6CG486700 Rh6DG472900
rosa_wichuraiana	Rw6G041070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	2 cut(s)	1353, 1997
Acc36I	ACCTGC	1 cut(s)	2344
Acc65I	GGTACC	1 cut(s)	518
AccB1I	GGYRCC	2 cut(s)	518, 935
AccB7I	CCANNNNNTGG	1 cut(s)	856
AccBSI	CCGCTC	1 cut(s)	1361
AccII	CGCG	3 cut(s)	2063, 2252, 2415
AciI	CCGC	7 cut(s)	75, 1163, 1359, 2063, 2175, 2413, 2430
AclWI	GGATC	1 cut(s)	1503
AcoI	YGGCCR	2 cut(s)	1401, 2562
AcsI	RAATTY	2 cut(s)	94, 812
AcuI	CTGAAG	4 cut(s)	645, 1281, 1445, 1737
AfaI	GTAC	5 cut(s)	487, 520, 1208, 1968, 2041
AfeI	AGCGCT	1 cut(s)	1203
AfiI	CCNNNNNNNGG	7 cut(s)	856, 1071, 1794, 1963, 2281, 2462, 2571
AflIII	ACRYGT	1 cut(s)	575
AjnI	CCWGG	3 cut(s)	1011, 1845, 1956
AjuI	GAANNNNNNNTTGG	4 cut(s)	814, 846, 1371, 1403
Alw21I	GWGCWC	2 cut(s)	1024, 2214
Alw26I	GTCTC	6 cut(s)	181, 497, 682, 856, 979, 1836
AlwI	GGATC	1 cut(s)	1503
AlwNI	CAGNNNCTG	2 cut(s)	1715, 1823
Ama87I	CYCGRG	1 cut(s)	2368
Aor51HI	AGCGCT	1 cut(s)	1203
AoxI	GGCC	8 cut(s)	760, 1266, 1401, 2091, 2223, 2301, 2373, 2562
ApaI	GGGCCC	1 cut(s)	2227
ApoI	RAATTY	2 cut(s)	94, 812
Asp700I	GAANNNNTTC	1 cut(s)	2534
Asp718I	GGTACC	1 cut(s)	518
AspLEI	GCGC	6 cut(s)	1204, 1354, 1998, 2068, 2417, 2578
AspS9I	GGNCC	8 cut(s)	395, 539, 2091, 2223, 2224, 2301, 2373, 2489
AsuC2I	CCSGG	1 cut(s)	79
AsuHPI	GGTGA	6 cut(s)	675, 1177, 1997, 2163, 2342, 2487
AsuNHI	GCTAGC	1 cut(s)	701
AvaI	CYCGRG	1 cut(s)	2368
AvaII	GGWCC	3 cut(s)	395, 539, 2489
BaeGI	GKGCMC	1 cut(s)	2227
BalI	TGGCCA	2 cut(s)	1403, 2564
BanI	GGYRCC	2 cut(s)	518, 935
BanII	GRGCYC	2 cut(s)	2214, 2227
BbsI	GAAGAC	1 cut(s)	1859
Bbv12I	GWGCWC	2 cut(s)	1024, 2214
BbvCI	CCTCAGC	3 cut(s)	1374, 1491, 1522
BccI	CCATC	6 cut(s)	136, 176, 244, 1078, 1601, 2500
BceAI	ACGGC	2 cut(s)	540, 2333
BciT130I	CCWGG	3 cut(s)	1013, 1847, 1958
BcnI	CCSGG	1 cut(s)	79
BcoDI	GTCTC	6 cut(s)	181, 497, 682, 856, 979, 1836
BfaI	CTAG	7 cut(s)	153, 237, 702, 1110, 1857, 1874, 2088
BfmI	CTRYAG	5 cut(s)	18, 273, 348, 1613, 2193
BfoI	RGCGCY	1 cut(s)	1205
BfuAI	ACCTGC	1 cut(s)	2344
BlpI	GCTNAGC	2 cut(s)	651, 2213
BmcAI	AGTACT	1 cut(s)	2041
Bme1390I	CCNGG	4 cut(s)	79, 1013, 1847, 1958
Bme18I	GGWCC	3 cut(s)	395, 539, 2489
BmeT110I	CYCGRG	1 cut(s)	2368
BmgT120I	GGNCC	8 cut(s)	395, 539, 2091, 2223, 2224, 2301, 2373, 2489
BmiI	GGNNCC	6 cut(s)	396, 397, 520, 937, 1620, 2225
BmrFI	CCNGG	4 cut(s)	79, 1013, 1847, 1958
BmsI	GCATC	7 cut(s)	73, 437, 1286, 1823, 2221, 2441, 2587
BmtI	GCTAGC	1 cut(s)	705
BpiI	GAAGAC	1 cut(s)	1859
BplI	GAGNNNNNCTC	2 cut(s)	178, 210
BpmI	CTGGAG	7 cut(s)	21, 285, 450, 1034, 1700, 1868, 2052
Bpu10I	CCTNAGC	5 cut(s)	1143, 1374, 1491, 1522, 2340
Bpu1102I	GCTNAGC	2 cut(s)	651, 2213
BpuEI	CTTGAG	3 cut(s)	908, 1154, 1484
BpuMI	CCSGG	1 cut(s)	79
BsaI	GGTCTC	1 cut(s)	181
BsaXI	ACNNNNNCTCC	8 cut(s)	19, 49, 448, 478, 810, 840, 1421, 1451
Bsc4I	CCNNNNNNNGG	7 cut(s)	856, 1071, 1794, 1963, 2281, 2462, 2571
Bse1I	ACTGG	1 cut(s)	2376
BseBI	CCWGG	3 cut(s)	1013, 1847, 1958
BseGI	GGATG	3 cut(s)	88, 451, 1277
BseLI	CCNNNNNNNGG	7 cut(s)	856, 1071, 1794, 1963, 2281, 2462, 2571
BseNI	ACTGG	1 cut(s)	2376
BseRI	GAGGAG	6 cut(s)	24, 917, 1205, 1469, 1608, 2297
BseSI	GKGCMC	1 cut(s)	2227
BseYI	CCCAGC	1 cut(s)	2177
BsgI	GTGCAG	1 cut(s)	762
Bsh1236I	CGCG	3 cut(s)	2063, 2252, 2415
BshFI	GGCC	8 cut(s)	762, 1268, 1403, 2093, 2225, 2303, 2375, 2564
BshNI	GGYRCC	2 cut(s)	518, 935
BsiHKAI	GWGCWC	2 cut(s)	1024, 2214
BsiHKCI	CYCGRG	1 cut(s)	2368
BsiSI	CCGG	2 cut(s)	78, 230
BslFI	GGGAC	1 cut(s)	381
BslI	CCNNNNNNNGG	7 cut(s)	856, 1071, 1794, 1963, 2281, 2462, 2571
BsmAI	GTCTC	6 cut(s)	181, 497, 682, 856, 979, 1836
BsmBI	CGTCTC	2 cut(s)	856, 1836
BsmFI	GGGAC	1 cut(s)	381
BsnI	GGCC	8 cut(s)	762, 1268, 1403, 2093, 2225, 2303, 2375, 2564
Bso31I	GGTCTC	1 cut(s)	181
BsoBI	CYCGRG	1 cut(s)	2368
Bsp120I	GGGCCC	1 cut(s)	2223
Bsp1286I	GDGCHC	3 cut(s)	1024, 2214, 2227
Bsp1407I	TGTACA	1 cut(s)	1206
Bsp143I	GATC	1 cut(s)	1495
Bsp1720I	GCTNAGC	2 cut(s)	651, 2213
Bsp19I	CCATGG	1 cut(s)	2478
BspACI	CCGC	7 cut(s)	75, 1163, 1359, 2063, 2175, 2413, 2430
BspANI	GGCC	8 cut(s)	762, 1268, 1403, 2093, 2225, 2303, 2375, 2564
BspFNI	CGCG	3 cut(s)	2063, 2252, 2415
BspLI	GGNNCC	6 cut(s)	396, 397, 520, 937, 1620, 2225
BspMAI	CTGCAG	2 cut(s)	22, 277
BspMI	ACCTGC	1 cut(s)	2344
BspOI	GCTAGC	1 cut(s)	705
BspPI	GGATC	1 cut(s)	1503
BspQI	GCTCTTC	1 cut(s)	1983
BspT107I	GGYRCC	2 cut(s)	518, 935
BspTNI	GGTCTC	1 cut(s)	181
BsrBI	CCGCTC	1 cut(s)	1361
BsrGI	TGTACA	1 cut(s)	1206
BsrI	ACTGG	1 cut(s)	2376
BssMI	GATC	1 cut(s)	1495
BssT1I	CCWWGG	5 cut(s)	1122, 1281, 1404, 2400, 2478
Bst2UI	CCWGG	3 cut(s)	1013, 1847, 1958
Bst4CI	ACNGT	7 cut(s)	62, 128, 352, 490, 856, 1300, 2044
Bst6I	CTCTTC	4 cut(s)	1074, 1257, 1446, 1983
BstAPI	GCANNNNNTGC	4 cut(s)	281, 698, 1658, 2354
BstAUI	TGTACA	1 cut(s)	1206
BstC8I	GCNNGC	7 cut(s)	270, 657, 703, 1356, 1446, 1938, 2022
BstDSI	CCRYGG	4 cut(s)	522, 855, 2478, 2543
BstF5I	GGATG	3 cut(s)	88, 451, 1277
BstFNI	CGCG	3 cut(s)	2063, 2252, 2415
BstH2I	RGCGCY	1 cut(s)	1205
BstHHI	GCGC	6 cut(s)	1204, 1354, 1998, 2068, 2417, 2578
BstKTI	GATC	1 cut(s)	1498
BstMAI	GTCTC	6 cut(s)	181, 497, 682, 856, 979, 1836
BstMBI	GATC	1 cut(s)	1495
BstNI	CCWGG	3 cut(s)	1013, 1847, 1958
BstNSI	RCATGY	2 cut(s)	284, 1358
BstSCI	CCNGG	4 cut(s)	77, 1011, 1845, 1956
BstSFI	CTRYAG	5 cut(s)	18, 273, 348, 1613, 2193
BstSLI	GKGCMC	1 cut(s)	2227
BstUI	CGCG	3 cut(s)	2063, 2252, 2415
BstV2I	GAAGAC	1 cut(s)	1859
BstX2I	RGATCY	1 cut(s)	1495
BstXI	CCANNNNNNTGG	1 cut(s)	1288
BstYI	RGATCY	1 cut(s)	1495
BsuRI	GGCC	8 cut(s)	762, 1268, 1403, 2093, 2225, 2303, 2375, 2564
BtgI	CCRYGG	4 cut(s)	522, 855, 2478, 2543
BtgZI	GCGATG	1 cut(s)	263
BtsCI	GGATG	3 cut(s)	88, 451, 1277
BtsIMutI	CAGTG	4 cut(s)	729, 1230, 1305, 1824
BveI	ACCTGC	1 cut(s)	2344
Cac8I	GCNNGC	7 cut(s)	270, 657, 703, 1356, 1446, 1938, 2022
CaiI	CAGNNNCTG	2 cut(s)	1715, 1823
CfoI	GCGC	6 cut(s)	1204, 1354, 1998, 2068, 2417, 2578
Cfr13I	GGNCC	8 cut(s)	395, 539, 2091, 2223, 2224, 2301, 2373, 2489
CseI	GACGC	3 cut(s)	459, 873, 1818
Csp6I	GTAC	5 cut(s)	486, 519, 1207, 1967, 2040
CspCI	CAANNNNNGTGG	2 cut(s)	2025, 2060
CviAII	CATG	7 cut(s)	107, 281, 1355, 1399, 2228, 2309, 2479
CviQI	GTAC	5 cut(s)	486, 519, 1207, 1967, 2040
DpnI	GATC	1 cut(s)	1497
DpnII	GATC	1 cut(s)	1495
EaeI	YGGCCR	2 cut(s)	1401, 2562
Eam1104I	CTCTTC	4 cut(s)	1074, 1257, 1446, 1983
EarI	CTCTTC	4 cut(s)	1074, 1257, 1446, 1983
EciI	GGCGGA	1 cut(s)	64
Ecl136II	GAGCTC	1 cut(s)	2212
Eco130I	CCWWGG	5 cut(s)	1122, 1281, 1404, 2400, 2478
Eco147I	AGGCCT	1 cut(s)	762
Eco24I	GRGCYC	2 cut(s)	2214, 2227
Eco31I	GGTCTC	1 cut(s)	181
Eco47I	GGWCC	3 cut(s)	395, 539, 2489
Eco47III	AGCGCT	1 cut(s)	1203
Eco53kI	GAGCTC	1 cut(s)	2212
Eco57I	CTGAAG	4 cut(s)	645, 1281, 1445, 1737
Eco88I	CYCGRG	1 cut(s)	2368
EcoICRI	GAGCTC	1 cut(s)	2212
EcoO109I	RGGNCCY	2 cut(s)	395, 2091
EcoRII	CCWGG	3 cut(s)	1011, 1845, 1956
EcoT14I	CCWWGG	5 cut(s)	1122, 1281, 1404, 2400, 2478
EcoT38I	GRGCYC	2 cut(s)	2214, 2227
ErhI	CCWWGG	5 cut(s)	1122, 1281, 1404, 2400, 2478
Esp3I	CGTCTC	2 cut(s)	856, 1836
FaeI	CATG	7 cut(s)	110, 284, 1358, 1402, 2231, 2312, 2482
FalI	AAGNNNNNCTT	6 cut(s)	1404, 1436, 1443, 1475, 2522, 2554
FaqI	GGGAC	1 cut(s)	381
FatI	CATG	7 cut(s)	106, 280, 1354, 1398, 2227, 2308, 2478
FauI	CCCGC	1 cut(s)	2182
FauNDI	CATATG	1 cut(s)	661
FokI	GGATG	3 cut(s)	95, 438, 1264
FriOI	GRGCYC	2 cut(s)	2214, 2227
FspBI	CTAG	7 cut(s)	153, 237, 702, 1110, 1857, 1874, 2088
FspI	TGCGCA	2 cut(s)	1353, 1997
GlaI	GCGC	6 cut(s)	1203, 1353, 1997, 2067, 2416, 2577
GsaI	CCCAGC	1 cut(s)	2181
GsuI	CTGGAG	7 cut(s)	21, 285, 450, 1034, 1700, 1868, 2052
HaeII	RGCGCY	1 cut(s)	1205
HaeIII	GGCC	8 cut(s)	762, 1268, 1403, 2093, 2225, 2303, 2375, 2564
HapII	CCGG	2 cut(s)	78, 230
HgaI	GACGC	3 cut(s)	459, 873, 1818
HhaI	GCGC	6 cut(s)	1204, 1354, 1998, 2068, 2417, 2578
Hin1II	CATG	7 cut(s)	110, 284, 1358, 1402, 2231, 2312, 2482
Hin6I	GCGC	6 cut(s)	1202, 1352, 1996, 2066, 2415, 2576
HinP1I	GCGC	6 cut(s)	1202, 1352, 1996, 2066, 2415, 2576
HincII	GTYRAC	1 cut(s)	314
HindII	GTYRAC	1 cut(s)	314
HindIII	AAGCTT	2 cut(s)	2124, 2324
HpaII	CCGG	2 cut(s)	78, 230
HphI	GGTGA	6 cut(s)	675, 1177, 1997, 2163, 2342, 2487
Hpy166II	GTNNAC	4 cut(s)	314, 667, 2141, 2333
Hpy8I	GTNNAC	4 cut(s)	314, 667, 2141, 2333
HpyAV	CCTTC	9 cut(s)	380, 958, 1426, 1666, 1726, 1799, 1879, 2003, 2565
HpyCH4III	ACNGT	7 cut(s)	62, 128, 352, 490, 856, 1300, 2044
HpyCH4IV	ACGT	1 cut(s)	577
HpySE526I	ACGT	1 cut(s)	577
Hsp92II	CATG	7 cut(s)	110, 284, 1358, 1402, 2231, 2312, 2482
HspAI	GCGC	6 cut(s)	1202, 1352, 1996, 2066, 2415, 2576
KflI	GGGWCCC	1 cut(s)	395
KpnI	GGTACC	1 cut(s)	522
Kzo9I	GATC	1 cut(s)	1495
LguI	GCTCTTC	1 cut(s)	1983
LweI	GCATC	7 cut(s)	73, 437, 1286, 1823, 2221, 2441, 2587
MaeI	CTAG	7 cut(s)	153, 237, 702, 1110, 1857, 1874, 2088
MaeII	ACGT	1 cut(s)	577
MaeIII	GTNAC	7 cut(s)	25, 122, 352, 727, 1165, 1228, 2182
MalI	GATC	1 cut(s)	1497
MbiI	CCGCTC	1 cut(s)	1361
MboI	GATC	1 cut(s)	1495
MflI	RGATCY	1 cut(s)	1495
MhlI	GDGCHC	3 cut(s)	1024, 2214, 2227
MlsI	TGGCCA	2 cut(s)	1403, 2564
MluNI	TGGCCA	2 cut(s)	1403, 2564
MlyI	GAGTC	4 cut(s)	981, 1046, 1346, 1605
MmeI	TCCRAC	5 cut(s)	81, 242, 347, 479, 1842
Mox20I	TGGCCA	2 cut(s)	1403, 2564
MroXI	GAANNNNTTC	1 cut(s)	2534
MscI	TGGCCA	2 cut(s)	1403, 2564
Msp20I	TGGCCA	2 cut(s)	1403, 2564
MspA1I	CMGCKG	3 cut(s)	272, 1160, 2177
MspI	CCGG	2 cut(s)	78, 230
MspR9I	CCNGG	4 cut(s)	79, 1013, 1847, 1958
MvaI	CCWGG	3 cut(s)	1013, 1847, 1958
MvnI	CGCG	3 cut(s)	2063, 2252, 2415
NciI	CCSGG	1 cut(s)	79
NcoI	CCATGG	1 cut(s)	2478
NdeI	CATATG	1 cut(s)	661
NdeII	GATC	1 cut(s)	1495
NheI	GCTAGC	1 cut(s)	701
NlaIII	CATG	7 cut(s)	110, 284, 1358, 1402, 2231, 2312, 2482
NlaIV	GGNNCC	6 cut(s)	396, 397, 520, 937, 1620, 2225
NmuCI	GTSAC	4 cut(s)	352, 727, 1165, 1228
NsbI	TGCGCA	2 cut(s)	1353, 1997
NspI	RCATGY	2 cut(s)	284, 1358
PaeI	GCATGC	1 cut(s)	1358
PceI	AGGCCT	1 cut(s)	762
PciSI	GCTCTTC	1 cut(s)	1983
PdmI	GAANNNNTTC	1 cut(s)	2534
PflFI	GACNNNGTC	1 cut(s)	1858
PflMI	CCANNNNNTGG	1 cut(s)	856
PleI	GAGTC	4 cut(s)	981, 1046, 1345, 1604
PpsI	GAGTC	4 cut(s)	981, 1046, 1345, 1604
PpuMI	RGGWCCY	1 cut(s)	395
Psp124BI	GAGCTC	1 cut(s)	2214
Psp5II	RGGWCCY	1 cut(s)	395
Psp6I	CCWGG	3 cut(s)	1011, 1845, 1956
PspFI	CCCAGC	1 cut(s)	2177
PspGI	CCWGG	3 cut(s)	1011, 1845, 1956
PspN4I	GGNNCC	6 cut(s)	396, 397, 520, 937, 1620, 2225
PspOMI	GGGCCC	1 cut(s)	2223
PspPI	GGNCC	8 cut(s)	395, 539, 2091, 2223, 2224, 2301, 2373, 2489
PspPPI	RGGWCCY	1 cut(s)	395
PstI	CTGCAG	2 cut(s)	22, 277
PstNI	CAGNNNCTG	2 cut(s)	1715, 1823
PsuI	RGATCY	1 cut(s)	1495
PsyI	GACNNNGTC	1 cut(s)	1858
PvuII	CAGCTG	2 cut(s)	272, 1160
RsaI	GTAC	5 cut(s)	487, 520, 1208, 1968, 2041
RsaNI	GTAC	5 cut(s)	486, 519, 1207, 1967, 2040
SacI	GAGCTC	1 cut(s)	2214
SapI	GCTCTTC	1 cut(s)	1983
Sau3AI	GATC	1 cut(s)	1495
Sau96I	GGNCC	8 cut(s)	395, 539, 2091, 2223, 2224, 2301, 2373, 2489
ScaI	AGTACT	1 cut(s)	2041
SchI	GAGTC	4 cut(s)	981, 1046, 1346, 1605
ScrFI	CCNGG	4 cut(s)	79, 1013, 1847, 1958
SduI	GDGCHC	3 cut(s)	1024, 2214, 2227
SfaNI	GCATC	7 cut(s)	73, 437, 1286, 1823, 2221, 2441, 2587
SfcI	CTRYAG	5 cut(s)	18, 273, 348, 1613, 2193
SinI	GGWCC	3 cut(s)	395, 539, 2489
SmlI	CTYRAG	3 cut(s)	887, 1133, 1499
SmoI	CTYRAG	3 cut(s)	887, 1133, 1499
SphI	GCATGC	1 cut(s)	1358
SseBI	AGGCCT	1 cut(s)	762
SsiI	CCGC	7 cut(s)	75, 1163, 1359, 2063, 2175, 2413, 2430
SspI	AATATT	1 cut(s)	2444
SspMI	CTAG	7 cut(s)	153, 237, 702, 1110, 1857, 1874, 2088
SstI	GAGCTC	1 cut(s)	2214
StuI	AGGCCT	1 cut(s)	762
StyD4I	CCNGG	4 cut(s)	77, 1011, 1845, 1956
StyI	CCWWGG	5 cut(s)	1122, 1281, 1404, 2400, 2478
TaaI	ACNGT	7 cut(s)	62, 128, 352, 490, 856, 1300, 2044
TaiI	ACGT	1 cut(s)	580
TaqI	TCGA	2 cut(s)	408, 2280
TatI	WGTACW	2 cut(s)	1206, 2039
TauI	GCSGC	3 cut(s)	1361, 2066, 2432
TscAI	CASTG	4 cut(s)	736, 1237, 1305, 1824
TseFI	GTSAC	4 cut(s)	352, 727, 1165, 1228
Tsp45I	GTSAC	4 cut(s)	352, 727, 1165, 1228
TspDTI	ATGAA	4 cut(s)	440, 1412, 1898, 2436
TspGWI	ACGGA	3 cut(s)	383, 1171, 2560
TspRI	CASTG	4 cut(s)	736, 1237, 1305, 1824
Tth111I	GACNNNGTC	1 cut(s)	1858
Van91I	CCANNNNNTGG	1 cut(s)	856
VpaK11BI	GGWCC	3 cut(s)	395, 539, 2489
XapI	RAATTY	2 cut(s)	94, 812
XceI	RCATGY	2 cut(s)	284, 1358
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1072
XmnI	GAANNNNTTC	1 cut(s)	2534
XspI	CTAG	7 cut(s)	153, 237, 702, 1110, 1857, 1874, 2088
ZrmI	AGTACT	1 cut(s)	2041

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.