Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0006377

Physical Location & Seq

Genomic Coordinates Forward (+)

64819589 .. 64823004

Gene Structure 3416 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G041070.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2940 bp

ATGGAGGATGTCAAAGTTGCAGAAAAAATGCTTCCCCCAGAATCCTCTCCATCCAACCACCATGATGATCACTCAGGTAGGGATGCTCCTACAAACCCAGAAAAGCATGACAGAGTTGAAAGTGATAGTCATTTGTTAAAGAACGAGAATTCTAAACCAGAGGCTGCACAAAGTGCTTCTGATGTTCCATCTCCGGCACAAAATCAACTACATCCAACAGATAATCCGTCTTCTACCTCATTAACAATAGAAAATGGTAAATTACCAACTGCAGAACAGGCTTCAAAGATCCCATCTCTAGAGCAAAACCAGCCTCTGCCAACAGATACCACAGCCTCACAGTCGACAGTTACAGTTACTCAGGATACTCTGAAGAAAGATTCTGGTCCTAAAGATGTTGACCCATTATTACAACAAAACCAGCCTCTTCCAACAGATACCACAGCCTCACAGTCGACAGTTACAGTTACTCAGGAAACTCTGAAGAAAGATTCTGGTCCTAAAGATGTCGACCCGTTATTACAACAAAACCAGCCTCTTCCAACAGATACCACAGCCTCACAGTCGACATCGACAGTTACAGTTACTCAGGAAACTCTGAAGAAGGATTCTGGTCCTAAAGATGTTGACCCGTTATTACAACAAAATCAACATCTTCCAACAGATACTCCCGCCTCAACTATTGCAGCCGACAAAACGGAGACAAATATACTGAATACTGTCGCAGATTCTGTTCCTAAGAATGTTGACCTTGTAGTGCCATCCACCGTGCGTTCTCTGCCCAATATAAAGACCTCCAGAACTGCAATTACTAAATCTGAAGCCACCTCATCTCCTAACAGTGCTAAGCTGGCTTATGTGAACAATGCAGTATTATCACCCAATGTAAAGTATGCTAGCTTGTCTGCGAGAAAAGCAGGAGTCAGTGATTCTCCTAATAGTGCTAAGAGCAGAGGCCTTATTGATACAACTGCTCCTTTCGAATCAGTTAAAGAAGCTGTTTCCAAATTTGGAGGAATTGTTGATTGGAAAGCCCATAGAATCCAAACTGTGGAGAGACGCAAACTTGTGGAGCAAGAACTGGAGAAAGCACAGGAGGAGATTCCGGAGTATCAGAGACGATCCGAGATTGCTGAAGATGAGAAAACAAAAGTATTGAAGGAGCTGGACAGCACGAAGAGACTTGTAGAAGAATTGAAGCTTAACCTGGAGAGAGCACAAACAGAAGAGAGTCAGGCAAAACAAGACTCAGAACTTGCCAAACTAAGGGTGGAAGAGATGGAGCAAGGTATTGCTGATGAGGCCAGTGTTGCAGCCAAGGCACAGCTTGAGGTTGCCAAGGCAAGGCATACAGCTGCAGTGACAGAGCTAAAATCTGTTAAAGAGGAGCTGGAAGCACTGCACAAGGAATATGCTTCTTTAGTGACTGAGAAAGACATGGCTATCAAAAATGCCGAAGAGGCCATTGCTGCATCCAAGGAAGTTGAGAAAACAGTTGAAGACCTAACTATTGAACTGATTGCGACAAAGGAGTCATTGGAGTCTGCACATGCTGCCCATTTGGAAGCAGAGGAACAAAGGATTGGAGCAGTCATGGCCAAGGAACAAGATTCTCATCATTGGGAAAAGGAGATAAAGCAGGCAGAGGAGGAGCTTCAGAGACTTAACCAGCAAATTCTGTCAGCTAAGGATCTTAAGTCCAAACTAGACACGGCCTCGGCCTTGCTTCTTGATTTAAAAGCTGAATTAGCTGCTTATATGGAATCAAGATTCAAGGAGGACAGTGATGGAGGACAATCGAAAGATGAGCAAGAAACACCGGAGAGGAAAACTCATACTGATATACAAGCAGCAGTTGCTTCAGCAAAGAAGGAGCTGGAAGAAGTGAAGCTCAACATAGAGAAAGCAATTGCTGAAGTAAATTGCTTAAAGGTGGCTGCCTCGGCATTGAAGTCTGAACTTGAAAGTGAGAAATCAGCTCTTGCCACCATTAGGCAAAGAGAAGGAATGGCATCAGTGGCTGTGGCATCTCTAGAAGCTGAACTGGACAGGACTAGGTCAGAAATAGCTGTAGTTCAGATGAAGGAGAAAGATGCCAGAGAGAAGATGGTGGAGCTACCCAAAGAGTTGCAGCAAGCAGCACAACAGGCTGACCAGGCTAAGGTACTAGCCAAAATGGCTGCTGAAGATCTGCGTAAGGCAAAAGAAGAAGCAGATCAAGCAAAGGCTGGAGCAAGTACTATGGAGAGTAGATTATTAGCAGCACAAAAGGAAATAGAGGCTGCAAGGGCTTCTGAAAGGTTAGCGTTAGCAGCAATCAAAGCATTGCAGGAGAGTGAGCAAGCCCGATCCACCCCCGCTGATGCTGATTCACCGCCTGGAGTAACACTCTCTATAGGGGAGTATTATGAGCTCAGCAAACGTGCCCATGAGGCAGAGGAGCAGGCAAACACGAGAGTTGCCGCTGCAAGTTCCAAAATTGAGGCAGCCAAGGAGTCTGAGCTGAGAAGCTTGGAGAAGTTGGAAGAAGTGAGTAGGGAAATGGCTTCGAGAAAAGAAGCACTCAGGATGGCAATGGAGAAGGCTGAGAAGGCCAAGGAAGGGAAATTGGGTGTTGAACAGGAGCTGAGAAAGTGGAGAGCCGAACACGAGCAACGAAGAAAGCTTGGTGAACCTGGTCAGGCAGCCGTAAACCCCACTAGAAGCCCAAGGGGTAGTTTTGAGGGAGTGAAAGATTCTAAAGGCTTTGACCAGGCACCTGTCTCTGCAGTACGTGACCCTTATGGTTCAATCCCCAACCATGCATCAGGAAATGTCACTGGAAGTGAGCCATCCCCCCAAGAAGTAAAGGGTGGAAAGAAGAAGAAGAAGTCATTTTTCCCACGGATTTTTATGTTTTTGGCCAGAAGAAAGCATGCGAAAAATCAAGCTGCACGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006996 GO:0008150 GO:0009657 GO:0009658 GO:0009902 GO:0009903 GO:0009904 GO:0009987 GO:0016020 GO:0016043 GO:0019750 GO:0044424 GO:0044444 GO:0044464 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051644 GO:0051649 GO:0051656 GO:0051667 GO:0071840 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WEMBL

Protein Analysis

979

Amino Acids

107.03

Weight (kDa)

5.46

Isoelectric Point (pI)

51.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WEMBL	PF05701	318 - 886	1.7e-261	Weak chloroplast movement under blue light

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006377)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G26570 AT2G26570
fragaria_vesca	FvH4_2g34472 FvH4_2g34472 FvH4_2g34472 FvH4_2g34472 FvH4_2g34472 FvH4_2g34472 FvH4_2g34472
malus_domestica	MD08G1102100.v1.1 MD15G1083600.v1.1
prunus_persica	Prupe.1G436100_v2.0.a1 Prupe.1G436100_v2.0.a1 Prupe.1G436100_v2.0.a1
pyrus_communis	pycom15g07820
rosa_chinensis	RchiOBHm_Chr6g0307881
rosa_laevigata	RLG00000010691
rosa_multiflora	Rmu_sc0009398.1_g000001
rosa_roxburghii	Rroxscaffold_7G00160800
rosa_rugosa	Rorug06G0361400 Rorug06G0361400 Rorug06G0361400
rosa_samantha	Rh6AG470400 Rh6BG481400 Rh6CG486700 Rh6DG472900
rosa_wichuraiana	Rw6G041070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1531
AccB1I	GGYRCC	1 cut(s)	2755
AccB7I	CCANNNNNTGG	1 cut(s)	1051
AccI	GTMKAC	4 cut(s)	344, 455, 510, 566
AccIII	TCCGGA	1 cut(s)	1105
AciI	CCGC	4 cut(s)	672, 2358, 2375, 2463
AclWI	GGATC	4 cut(s)	283, 1116, 1698, 2343
AcoI	YGGCCR	2 cut(s)	1596, 2901
AcsI	RAATTY	3 cut(s)	148, 1007, 1674
AcuI	CTGAAG	9 cut(s)	392, 503, 620, 840, 1155, 1640, 1845, 1935, 2205
AdeI	CACNNNGTG	1 cut(s)	173
AfaI	GTAC	3 cut(s)	2166, 2239, 2772
AfiI	CCNNNNNNNGG	6 cut(s)	1051, 1266, 1344, 1992, 2161, 2601
AflII	CTTAAG	1 cut(s)	1694
AjnI	CCWGG	5 cut(s)	1206, 2154, 2377, 2674, 2751
AjuI	GAANNNNNNNTTGG	4 cut(s)	1009, 1041, 1566, 1598
Alw21I	GWGCWC	2 cut(s)	1219, 2415
Alw26I	GTCTC	6 cut(s)	695, 1051, 1111, 1174, 1654, 2767
AlwI	GGATC	4 cut(s)	283, 1116, 1698, 2343
AlwNI	CAGNNNCTG	5 cut(s)	164, 316, 731, 2021, 2626
Aor13HI	TCCGGA	1 cut(s)	1105
AoxI	GGCC	8 cut(s)	955, 1302, 1461, 1596, 1713, 1719, 2592, 2901
ApoI	RAATTY	3 cut(s)	148, 1007, 1674
AspS9I	GGNCC	3 cut(s)	386, 497, 614
AsuHPI	GGTGA	3 cut(s)	870, 2364, 2681
AsuII	TTCGAA	1 cut(s)	981
AsuNHI	GCTAGC	1 cut(s)	896
AvaII	GGWCC	3 cut(s)	386, 497, 614
BaeGI	GKGCMC	1 cut(s)	2428
BalI	TGGCCA	2 cut(s)	1598, 2903
BanI	GGYRCC	1 cut(s)	2755
BanII	GRGCYC	1 cut(s)	2415
BauI	CACGAG	2 cut(s)	2452, 2648
BbsI	GAAGAC	2 cut(s)	222, 1506
Bbv12I	GWGCWC	2 cut(s)	1219, 2415
BccI	CCATC	9 cut(s)	58, 196, 301, 769, 1273, 1781, 2101, 2563, 2839
BceAI	ACGGC	2 cut(s)	1728, 2672
BciT130I	CCWGG	5 cut(s)	1208, 2156, 2379, 2676, 2753
BciVI	GTATCC	1 cut(s)	358
BclI	TGATCA	1 cut(s)	67
BcoDI	GTCTC	6 cut(s)	695, 1051, 1111, 1174, 1654, 2767
BfaI	CTAG	7 cut(s)	299, 897, 1706, 2033, 2055, 2168, 2700
BfmI	CTRYAG	5 cut(s)	270, 1356, 2070, 2394, 2766
BfrI	CTTAAG	1 cut(s)	1694
BfuI	GTATCC	1 cut(s)	358
BglI	GCCNNNNNGGC	3 cut(s)	1460, 2177, 2432
BglII	AGATCT	1 cut(s)	2188
BlpI	GCTNAGC	2 cut(s)	846, 2414
BmcAI	AGTACT	1 cut(s)	2239
Bme1390I	CCNGG	5 cut(s)	1208, 2156, 2379, 2676, 2753
Bme18I	GGWCC	3 cut(s)	386, 497, 614
BmgT120I	GGNCC	3 cut(s)	386, 497, 614
BmiI	GGNNCC	1 cut(s)	2757
BmrFI	CCNGG	5 cut(s)	1208, 2156, 2379, 2676, 2753
BmsI	GCATC	7 cut(s)	73, 1481, 2021, 2036, 2083, 2353, 2813
BmtI	GCTAGC	1 cut(s)	900
BpiI	GAAGAC	2 cut(s)	222, 1506
BplI	GAGNNNNNCTC	4 cut(s)	1816, 1848, 2373, 2405
BpmI	CTGGAG	5 cut(s)	781, 1103, 1229, 2250, 2400
Bpu10I	CCTNAGC	2 cut(s)	1686, 2160
Bpu1102I	GCTNAGC	2 cut(s)	846, 2414
Bpu14I	TTCGAA	1 cut(s)	981
BpuEI	CTTGAG	1 cut(s)	1349
BsaAI	YACGTR	1 cut(s)	2774
BsaBI	GATNNNNATC	1 cut(s)	1614
BsaWI	WCCGGW	2 cut(s)	1105, 1819
BsaXI	ACNNNNNCTCC	8 cut(s)	652, 682, 817, 847, 958, 988, 1005, 1035
Bsc4I	CCNNNNNNNGG	6 cut(s)	1051, 1266, 1344, 1992, 2161, 2601
Bse1I	ACTGG	4 cut(s)	1086, 1305, 2049, 2824
Bse3DI	GCAATG	3 cut(s)	1464, 2324, 2580
Bse8I	GATNNNNATC	1 cut(s)	1614
BseAI	TCCGGA	1 cut(s)	1105
BseBI	CCWGG	5 cut(s)	1208, 2156, 2379, 2676, 2753
BseGI	GGATG	8 cut(s)	13, 50, 88, 211, 761, 1472, 2574, 2831
BseJI	GATNNNNATC	1 cut(s)	1614
BseLI	CCNNNNNNNGG	6 cut(s)	1051, 1266, 1344, 1992, 2161, 2601
BseMI	GCAATG	3 cut(s)	1464, 2324, 2580
BseNI	ACTGG	4 cut(s)	1086, 1305, 2049, 2824
BseRI	GAGGAG	5 cut(s)	1112, 1400, 1661, 1664, 2453
BseSI	GKGCMC	1 cut(s)	2428
BsgI	GTGCAG	4 cut(s)	150, 1385, 1530, 2916
BshFI	GGCC	8 cut(s)	957, 1304, 1463, 1598, 1715, 1721, 2594, 2903
BshNI	GGYRCC	1 cut(s)	2755
BsiHKAI	GWGCWC	2 cut(s)	1219, 2415
BsiSI	CCGG	3 cut(s)	194, 1106, 1820
BslI	CCNNNNNNNGG	6 cut(s)	1051, 1266, 1344, 1992, 2161, 2601
BsmAI	GTCTC	6 cut(s)	695, 1051, 1111, 1174, 1654, 2767
BsmBI	CGTCTC	2 cut(s)	1051, 1111
BsnI	GGCC	8 cut(s)	957, 1304, 1463, 1598, 1715, 1721, 2594, 2903
Bsp119I	TTCGAA	1 cut(s)	981
Bsp1286I	GDGCHC	3 cut(s)	1219, 2415, 2428
Bsp13I	TCCGGA	1 cut(s)	1105
Bsp143I	GATC	7 cut(s)	67, 288, 1121, 1690, 2188, 2215, 2348
Bsp1720I	GCTNAGC	2 cut(s)	846, 2414
BspACI	CCGC	4 cut(s)	672, 2358, 2375, 2463
BspANI	GGCC	8 cut(s)	957, 1304, 1463, 1598, 1715, 1721, 2594, 2903
BspEI	TCCGGA	1 cut(s)	1105
BspLI	GGNNCC	1 cut(s)	2757
BspMAI	CTGCAG	3 cut(s)	274, 1360, 2770
BspOI	GCTAGC	1 cut(s)	900
BspPI	GGATC	4 cut(s)	283, 1116, 1698, 2343
BspT104I	TTCGAA	1 cut(s)	981
BspT107I	GGYRCC	1 cut(s)	2755
BspTI	CTTAAG	1 cut(s)	1694
BsrDI	GCAATG	3 cut(s)	1464, 2324, 2580
BsrI	ACTGG	4 cut(s)	1086, 1305, 2049, 2824
BssMI	GATC	7 cut(s)	67, 288, 1121, 1690, 2188, 2215, 2348
BssSI	CACGAG	2 cut(s)	2452, 2648
BssT1I	CCWWGG	7 cut(s)	1317, 1338, 1476, 1599, 2490, 2595, 2708
Bst2BI	CACGAG	2 cut(s)	2452, 2648
Bst2UI	CCWGG	5 cut(s)	1208, 2156, 2379, 2676, 2753
Bst6I	CTCTTC	6 cut(s)	432, 543, 1172, 1221, 1269, 1452
BstAFI	CTTAAG	1 cut(s)	1694
BstAPI	GCANNNNNTGC	3 cut(s)	173, 1553, 1856
BstBAI	YACGTR	1 cut(s)	2774
BstBI	TTCGAA	1 cut(s)	981
BstC8I	GCNNGC	7 cut(s)	852, 898, 1641, 2136, 2343, 2445, 2916
BstDSI	CCRYGG	1 cut(s)	2882
BstF5I	GGATG	8 cut(s)	13, 50, 88, 211, 761, 1472, 2574, 2831
BstKTI	GATC	7 cut(s)	70, 291, 1124, 1693, 2191, 2218, 2351
BstMAI	GTCTC	6 cut(s)	695, 1051, 1111, 1174, 1654, 2767
BstMBI	GATC	7 cut(s)	67, 288, 1121, 1690, 2188, 2215, 2348
BstNI	CCWGG	5 cut(s)	1208, 2156, 2379, 2676, 2753
BstNSI	RCATGY	2 cut(s)	1553, 2918
BstSCI	CCNGG	5 cut(s)	1206, 2154, 2377, 2674, 2751
BstSFI	CTRYAG	5 cut(s)	270, 1356, 2070, 2394, 2766
BstSLI	GKGCMC	1 cut(s)	2428
BstV2I	GAAGAC	2 cut(s)	222, 1506
BstX2I	RGATCY	3 cut(s)	288, 1690, 2188
BstYI	RGATCY	3 cut(s)	288, 1690, 2188
BsuI	GTATCC	1 cut(s)	358
BsuRI	GGCC	8 cut(s)	957, 1304, 1463, 1598, 1715, 1721, 2594, 2903
BtgI	CCRYGG	1 cut(s)	2882
BtsCI	GGATG	8 cut(s)	13, 50, 88, 211, 761, 1472, 2574, 2831
BtsI	GCAGTG	2 cut(s)	1365, 1397
BtsIMutI	CAGTG	8 cut(s)	847, 931, 1312, 1365, 1397, 1789, 2022, 2817
Cac8I	GCNNGC	7 cut(s)	852, 898, 1641, 2136, 2343, 2445, 2916
CaiI	CAGNNNCTG	5 cut(s)	164, 316, 731, 2021, 2626
Cfr13I	GGNCC	3 cut(s)	386, 497, 614
CseI	GACGC	1 cut(s)	1068
CsiI	ACCWGGT	1 cut(s)	2674
Csp6I	GTAC	3 cut(s)	2165, 2238, 2771
CviAII	CATG	8 cut(s)	62, 107, 1438, 1550, 1594, 2429, 2801, 2915
CviQI	GTAC	3 cut(s)	2165, 2238, 2771
DpnI	GATC	7 cut(s)	69, 290, 1123, 1692, 2190, 2217, 2350
DpnII	GATC	7 cut(s)	67, 288, 1121, 1690, 2188, 2215, 2348
DraI	TTTAAA	1 cut(s)	1737
DraIII	CACNNNGTG	1 cut(s)	173
DrdI	GACNNNNNNGTC	1 cut(s)	1531
DseDI	GACNNNNNNGTC	1 cut(s)	1531
EaeI	YGGCCR	2 cut(s)	1596, 2901
Eam1104I	CTCTTC	6 cut(s)	432, 543, 1172, 1221, 1269, 1452
EarI	CTCTTC	6 cut(s)	432, 543, 1172, 1221, 1269, 1452
Ecl136II	GAGCTC	1 cut(s)	2413
Eco130I	CCWWGG	7 cut(s)	1317, 1338, 1476, 1599, 2490, 2595, 2708
Eco147I	AGGCCT	1 cut(s)	957
Eco24I	GRGCYC	1 cut(s)	2415
Eco47I	GGWCC	3 cut(s)	386, 497, 614
Eco53kI	GAGCTC	1 cut(s)	2413
Eco57I	CTGAAG	9 cut(s)	392, 503, 620, 840, 1155, 1640, 1845, 1935, 2205
EcoICRI	GAGCTC	1 cut(s)	2413
EcoRI	GAATTC	1 cut(s)	148
EcoRII	CCWGG	5 cut(s)	1206, 2154, 2377, 2674, 2751
EcoT14I	CCWWGG	7 cut(s)	1317, 1338, 1476, 1599, 2490, 2595, 2708
EcoT22I	ATGCAT	1 cut(s)	2806
EcoT38I	GRGCYC	1 cut(s)	2415
ErhI	CCWWGG	7 cut(s)	1317, 1338, 1476, 1599, 2490, 2595, 2708
Esp3I	CGTCTC	2 cut(s)	1051, 1111
FaeI	CATG	8 cut(s)	65, 110, 1441, 1553, 1597, 2432, 2804, 2918
FatI	CATG	8 cut(s)	61, 106, 1437, 1549, 1593, 2428, 2800, 2914
FauI	CCCGC	2 cut(s)	679, 2365
FbaI	TGATCA	1 cut(s)	67
FblI	GTMKAC	4 cut(s)	344, 455, 510, 566
FokI	GGATG	8 cut(s)	20, 37, 95, 198, 748, 1459, 2581, 2818
FriOI	GRGCYC	1 cut(s)	2415
FspBI	CTAG	7 cut(s)	299, 897, 1706, 2033, 2055, 2168, 2700
GsuI	CTGGAG	5 cut(s)	781, 1103, 1229, 2250, 2400
HaeIII	GGCC	8 cut(s)	957, 1304, 1463, 1598, 1715, 1721, 2594, 2903
HapII	CCGG	3 cut(s)	194, 1106, 1820
HgaI	GACGC	1 cut(s)	1068
Hin1II	CATG	8 cut(s)	65, 110, 1441, 1553, 1597, 2432, 2804, 2918
HincII	GTYRAC	7 cut(s)	345, 400, 456, 511, 567, 628, 748
HindII	GTYRAC	7 cut(s)	345, 400, 456, 511, 567, 628, 748
HindIII	AAGCTT	3 cut(s)	1199, 2509, 2663
HpaII	CCGG	3 cut(s)	194, 1106, 1820
HphI	GGTGA	3 cut(s)	870, 2364, 2681
HpyAV	CCTTC	8 cut(s)	598, 1153, 1864, 1997, 2077, 2575, 2584, 2594
HpyCH4IV	ACGT	3 cut(s)	2422, 2773, 2935
HpySE526I	ACGT	3 cut(s)	2422, 2773, 2935
Hsp92II	CATG	8 cut(s)	65, 110, 1441, 1553, 1597, 2432, 2804, 2918
Kpn2I	TCCGGA	1 cut(s)	1105
Ksp22I	TGATCA	1 cut(s)	67
Kzo9I	GATC	7 cut(s)	67, 288, 1121, 1690, 2188, 2215, 2348
LweI	GCATC	7 cut(s)	73, 1481, 2021, 2036, 2083, 2353, 2813
MabI	ACCWGGT	1 cut(s)	2674
MaeI	CTAG	7 cut(s)	299, 897, 1706, 2033, 2055, 2168, 2700
MaeII	ACGT	3 cut(s)	2422, 2773, 2935
MalI	GATC	7 cut(s)	69, 290, 1123, 1692, 2190, 2217, 2350
MboI	GATC	7 cut(s)	67, 288, 1121, 1690, 2188, 2215, 2348
MfeI	CAATTG	1 cut(s)	1908
MflI	RGATCY	3 cut(s)	288, 1690, 2188
MhlI	GDGCHC	3 cut(s)	1219, 2415, 2428
MlsI	TGGCCA	2 cut(s)	1598, 2903
MluNI	TGGCCA	2 cut(s)	1598, 2903
MlyI	GAGTC	6 cut(s)	930, 1240, 1241, 1541, 1550, 2504
MmeI	TCCRAC	6 cut(s)	78, 239, 455, 566, 683, 2502
Mox20I	TGGCCA	2 cut(s)	1598, 2903
Mph1103I	ATGCAT	1 cut(s)	2806
MroI	TCCGGA	1 cut(s)	1105
MscI	TGGCCA	2 cut(s)	1598, 2903
MseI	TTAA	9 cut(s)	137, 242, 990, 1203, 1380, 1665, 1695, 1736, 1928
MslI	CAYNNNNRTG	1 cut(s)	63
Msp20I	TGGCCA	2 cut(s)	1598, 2903
MspA1I	CMGCKG	3 cut(s)	1355, 2360, 2465
MspCI	CTTAAG	1 cut(s)	1694
MspI	CCGG	3 cut(s)	194, 1106, 1820
MspR9I	CCNGG	5 cut(s)	1208, 2156, 2379, 2676, 2753
MunI	CAATTG	1 cut(s)	1908
MvaI	CCWGG	5 cut(s)	1208, 2156, 2379, 2676, 2753
NdeII	GATC	7 cut(s)	67, 288, 1121, 1690, 2188, 2215, 2348
NheI	GCTAGC	1 cut(s)	896
NlaIII	CATG	8 cut(s)	65, 110, 1441, 1553, 1597, 2432, 2804, 2918
NlaIV	GGNNCC	1 cut(s)	2757
NmeAIII	GCCGAG	2 cut(s)	1697, 1922
NmuCI	GTSAC	4 cut(s)	1360, 1423, 2774, 2815
NsiI	ATGCAT	1 cut(s)	2806
NspI	RCATGY	2 cut(s)	1553, 2918
NspV	TTCGAA	1 cut(s)	981
PaeI	GCATGC	1 cut(s)	2918
PceI	AGGCCT	1 cut(s)	957
PflFI	GACNNNGTC	1 cut(s)	2056
PflMI	CCANNNNNTGG	1 cut(s)	1051
PleI	GAGTC	6 cut(s)	929, 1239, 1241, 1540, 1549, 2503
PpsI	GAGTC	6 cut(s)	929, 1239, 1241, 1540, 1549, 2503
Ppu21I	YACGTR	1 cut(s)	2774
Psp124BI	GAGCTC	1 cut(s)	2415
Psp6I	CCWGG	5 cut(s)	1206, 2154, 2377, 2674, 2751
PspGI	CCWGG	5 cut(s)	1206, 2154, 2377, 2674, 2751
PspN4I	GGNNCC	1 cut(s)	2757
PspPI	GGNCC	3 cut(s)	386, 497, 614
PsrI	GAACNNNNNNTAC	2 cut(s)	793, 825
PstI	CTGCAG	3 cut(s)	274, 1360, 2770
PstNI	CAGNNNCTG	5 cut(s)	164, 316, 731, 2021, 2626
PsuI	RGATCY	3 cut(s)	288, 1690, 2188
PsyI	GACNNNGTC	1 cut(s)	2056
PvuII	CAGCTG	1 cut(s)	1355
RsaI	GTAC	3 cut(s)	2166, 2239, 2772
RsaNI	GTAC	3 cut(s)	2165, 2238, 2771
RseI	CAYNNNNRTG	1 cut(s)	63
SacI	GAGCTC	1 cut(s)	2415
SalI	GTCGAC	4 cut(s)	343, 454, 509, 565
SaqAI	TTAA	9 cut(s)	137, 242, 990, 1203, 1380, 1665, 1695, 1736, 1928
Sau3AI	GATC	7 cut(s)	67, 288, 1121, 1690, 2188, 2215, 2348
Sau96I	GGNCC	3 cut(s)	386, 497, 614
ScaI	AGTACT	1 cut(s)	2239
SchI	GAGTC	6 cut(s)	930, 1240, 1241, 1541, 1550, 2504
ScrFI	CCNGG	5 cut(s)	1208, 2156, 2379, 2676, 2753
SduI	GDGCHC	3 cut(s)	1219, 2415, 2428
SexAI	ACCWGGT	1 cut(s)	2674
SfaNI	GCATC	7 cut(s)	73, 1481, 2021, 2036, 2083, 2353, 2813
SfcI	CTRYAG	5 cut(s)	270, 1356, 2070, 2394, 2766
SfuI	TTCGAA	1 cut(s)	981
SinI	GGWCC	3 cut(s)	386, 497, 614
SmiMI	CAYNNNNRTG	1 cut(s)	63
SmlI	CTYRAG	2 cut(s)	1328, 1694
SmoI	CTYRAG	2 cut(s)	1328, 1694
SphI	GCATGC	1 cut(s)	2918
SseBI	AGGCCT	1 cut(s)	957
SsiI	CCGC	4 cut(s)	672, 2358, 2375, 2463
SspMI	CTAG	7 cut(s)	299, 897, 1706, 2033, 2055, 2168, 2700
SstI	GAGCTC	1 cut(s)	2415
StuI	AGGCCT	1 cut(s)	957
StyD4I	CCNGG	5 cut(s)	1206, 2154, 2377, 2674, 2751
StyI	CCWWGG	7 cut(s)	1317, 1338, 1476, 1599, 2490, 2595, 2708
TaiI	ACGT	3 cut(s)	2425, 2776, 2938
TaqI	TCGA	8 cut(s)	344, 455, 510, 566, 572, 981, 1799, 2549
TatI	WGTACW	1 cut(s)	2237
TauI	GCSGC	1 cut(s)	2465
Tru1I	TTAA	9 cut(s)	137, 242, 990, 1203, 1380, 1665, 1695, 1736, 1928
Tru9I	TTAA	9 cut(s)	137, 242, 990, 1203, 1380, 1665, 1695, 1736, 1928
TscAI	CASTG	8 cut(s)	847, 931, 1312, 1365, 1404, 1789, 2022, 2824
TseFI	GTSAC	4 cut(s)	1360, 1423, 2774, 2815
Tsp45I	GTSAC	4 cut(s)	1360, 1423, 2774, 2815
TspDTI	ATGAA	1 cut(s)	2096
TspGWI	ACGGA	3 cut(s)	216, 713, 2899
TspRI	CASTG	8 cut(s)	847, 931, 1312, 1365, 1404, 1789, 2022, 2824
Tth111I	GACNNNGTC	1 cut(s)	2056
Van91I	CCANNNNNTGG	1 cut(s)	1051
Vha464I	CTTAAG	1 cut(s)	1694
VpaK11BI	GGWCC	3 cut(s)	386, 497, 614
XapI	RAATTY	3 cut(s)	148, 1007, 1674
XbaI	TCTAGA	2 cut(s)	298, 2032
XceI	RCATGY	2 cut(s)	1553, 2918
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1267, 2104
XmiI	GTMKAC	4 cut(s)	344, 455, 510, 566
XspI	CTAG	7 cut(s)	299, 897, 1706, 2033, 2055, 2168, 2700
ZrmI	AGTACT	1 cut(s)	2239
Zsp2I	ATGCAT	1 cut(s)	2806

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.