Rh6AG470400

Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0006377
Physical Location & Seq
Forward (+)
65354530 .. 65360820
6291 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG470400.1

Sequence Viewer

Length: 3177 bp
ATGGAGTGGCGCGATGGAGGTCAAAAGAGTCATTTTGACTTCGAGTTAGCTCCACGCTCTACCAGGCAAGTCAAGAGTACAGACCTATACAGATACGCTCGTGTTACTCCTTTCCACTTTCTTGGAATGGAGGATGTCAAAGTTGCAGAAAAAATGATTCCCCCAGAATCCTCTCCATCCAACCACCATGATGATCACTCTGGTAGGGATGCTCCTACAAACCCAGAAAAGCATGACAGAGTTGAAAGTGATAGTCATTTGTTAAAGAACGAGAATTCTAAACCAGAGGCTGCACAAAGTGCTTCTGATGTTCCATCTCTGGCACAAAATCAACTACATCCAACAGATAATCCGTCTTCTACCTCGTTAACAATAGAAAATGGTAAATTACCAACTGCAGAACAGGCTTCAAAGATCCCATCTCTAGAGCAAAACCAGCCTCTGCCAACAGATACCACAGCCTCACAGTCGACAGTTACAGTTACTCAGGATACTCTGAAGAAAGATTCTGGTCCTAAAGATGTTGACCCATTATTACAACAAAACCAGCCTCTTCCAACAGATACCACAGCCTCACAGTCGATAGTTACAGTTACTCAGGAAAATCTGAAGAAAGATTCTGGTCCTAAAGATGTCGACCCGTTATTACAACAAAACCAGCCTCTTCCAACAGATACCACAGCCTCACAGTCGACAGTTACAGTTACTCAGGAAACTCTGAAGAAAGATTCTGGTCCTAAAGATGTCGACCCGTTATTACAACAAAACCAGCCTCTTCCAACAGATACCACAACCTCACAGTCGACAGTTACAGTTACTCAGGAAACTCTGAAGAAGGATTCTGGTCCTAAAGATGTTGACCCGTTATTACAACAAAATCAACATCTTCCAACAGATACTCCAGCCTCAACCTCAACTATTGCAGCCGACAAAACGGAGACAAATATACTGAATACTGTTGCAGATTCTGTTCCTAAGAATGTTGACCTTGTAGTGCCATCCACCATGCGTTCTCTGCCCAATATAAAGACCTCCAGAACTGCAATTACTAAATCTGAAGCCACCTCATCTCCTAACAGTGCTAAGCTGGCTTATGTGAACAATGCAGTATTATCACCCAATGTAAAGTATGCTAGCTTGTCTGCGAGAAAAGCAGGAGTCAGTGATTCTCCTAATAGTGCTAAGAGCAGAGGCCTTATTGATACAACTGCTCCTTTCGAATCAGTTAAAGAAGCTGTTTCCAAATTTGGAGGAATTGTTGATTGGAAAGCCCATAGAATCCAAACTGTGGAGAGACGCAAACTTGTGGAGCAAGAACTGGAGAAAGCACAGGAGGAGATTCCGGAGTATCAGAGACGATCCGAGATTGCTGAAGATGAGAAAACAAAAGTATTGAAGGAGCTGGACAGCACGAAGAGACTTGTAGAAGAATTGAAGCTTAACCTGGAGAGAGCACAAACAGAAGAGAGTCAGGCAAAACAAGACTCAGAACTTGCCAAACTAAGGGTGGAAGAGATGGAGCAAGGTATTGCTGATGAGGCCAGTGTTGCAGCCAAGGCACAGCTTGAGGTTGCCAAGGCAAGGCATACAGCTGCAGTGACAGAGCTAAAATCTGTTAAAGAGGAGCTGGAAGCACTGCACAAGGAATATGCTTCTTTAGTGACTGAGAAAGACATGGCTATCAAAAATGCCGAAGAGGCCATTGCTGCATCCAAGGAAGTTGAGAAAACAGTTGAAGACCTAACTATTGAACTGATTGCGACAAAGGAGTCTTTGGAGTCTGCACATGCTGCCCATTTGGAAGCAGAGGAACAAAGGATTGGAGCAGTCATGGCCAAGGAACAAGATTCTCATCATTGGGAAAAGGAGATAAAGCAGGCAGAGGAGGAGCTTCAGAGACTTAACCAGCAAATTCTGTCAGCTAAGGATCTTAAGTCCAAACTAGACACAGCCTCGGCCTTGCTTCTTGATTTAAAAGCTGAATTAGCTGCTTATATGGAATCAAGATTCAAGGAGGACAGTGATGGAGGACAATCGAAAGATGAGCAAGAAACACCGGAGAGGAAAACTCATACTGATATACAAGCAGCAGTTGCTTCAGCAAAGAAGGAGCTGGAAGAAGTGAAGCTCAACATAGAGAAAGCAATTGCTGAAGTAAATTGCTTAAAGGTGGCTGCCTCGGCATTGAAGTCTGAACTTGAAAGTGAGAAATCAGCTCTTGCCACCATTAGGCAAAGAGAAGGAATGGCATCAGTGGCTGTGGCATCTCTAGAAGCTGAACTGGACAGGACTAGGTCAGAAATAGCTGTAGTTCAGATGAAGGAGAAAGATGCCAGAGAGAAGATGGTGGAGCTACCCAAAGAGTTGCAGCAAGCAGCACAACAGGCTGACCAGGCAAAGGTACTAGCCAAAATGGCTGCTGAAGATCTGCGTAAGGCAAAAGAAGAAGCAGATCAAGCAAAGGCTGGAGCAAGTACTATGGAGAGTAGATTATTAGCAGCACAAAAGGAAATAGAGGCTGCAAGGGCTTCTGAAAGGTTAGCGTTAGCAGCAATCAAAGCATTGCAGGAGAGTGAGCAAGCCCGATCCACCCCCGCTGATGCTGATTCACCGCCTGGAGTAACACTCTCTATAGGGGAGTATTATGAGCTCAGCAAACGTGCCCATGAGGCAGAGGAGCAGGCAAACACGAGAGTTGCCGCTGCAAGTTCCAAAATTGAGGCAGCCAAGGAGTCTGAGCTGAGAAGCTTGGAGAAGTTGGAAGAAGTGAGTAGGGAAATGGCTTCGAGAAAAGAAGCACTCAGGATGGCAATGGAGAAGGCTGAGAAGGCCAAGGAAGGGAAATTGGGTGTTGAACAGGAGCTGAGAAAGTGGAGAGCCGAACACGAGCAACGACGAAAGCTTGGTGAACCTGGTCAGGCAGCTGTAAACCCCACTAAAAGCCCAAGGGGTAGTTTTGAGGGAGTGAAAGATTCTAAAGGCTTTGACCAGGCACCTGTCTCTGCAGTACGTGACCCTTATGGTTCAAGCCCCAACCATGCATCAGGAAATGTCACTGGAAGTGAGCCATCCCCCCAAGAAGTAAAGGGTGGAAAGAAGAAGAAGAAGTCATTTTTCCCACGGATTTTTATGTTTTTGGCCAGAAGAAAGCATGCGAAAAATCAAGCTGCACGTTGA

Protein Analysis

1058

Amino Acids

116.06

Weight (kDa)

5.52

Isoelectric Point (pI)

49.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WEMBL PF05701 397 - 965 2e-261 Weak chloroplast movement under blue light
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1768
AccB1I GGYRCC 1 cut(s) 2992
AccB7I CCANNNNNTGG 1 cut(s) 1288
AccI GTMKAC 5 cut(s) 470, 636, 692, 747, 803
AccII CGCG 1 cut(s) 12
AccIII TCCGGA 1 cut(s) 1342
AciI CCGC 3 cut(s) 2595, 2612, 2700
AclWI GGATC 4 cut(s) 409, 1353, 1935, 2580
AcoI YGGCCR 2 cut(s) 1833, 3138
AcsI RAATTY 3 cut(s) 274, 1244, 1911
AdeI CACNNNGTG 1 cut(s) 299
AfaI GTAC 4 cut(s) 79, 2403, 2476, 3009
AfiI CCNNNNNNNGG 6 cut(s) 1288, 1503, 1581, 2229, 2398, 2838
AflII CTTAAG 1 cut(s) 1931
AjnI CCWGG 6 cut(s) 62, 1443, 2391, 2614, 2911, 2988
AjuI GAANNNNNNNTTGG 4 cut(s) 1246, 1278, 1803, 1835
Alw21I GWGCWC 2 cut(s) 1456, 2652
Alw26I GTCTC 6 cut(s) 932, 1288, 1348, 1411, 1891, 3004
AlwI GGATC 4 cut(s) 409, 1353, 1935, 2580
AlwNI CAGNNNCTG 5 cut(s) 290, 442, 968, 2258, 2863
Aor13HI TCCGGA 1 cut(s) 1342
AoxI GGCC 7 cut(s) 1192, 1539, 1698, 1833, 1956, 2829, 3138
ApoI RAATTY 3 cut(s) 274, 1244, 1911
AspLEI GCGC 1 cut(s) 12
AspS9I GGNCC 4 cut(s) 512, 623, 734, 845
AsuHPI GGTGA 3 cut(s) 1107, 2601, 2918
AsuII TTCGAA 1 cut(s) 1218
AsuNHI GCTAGC 1 cut(s) 1133
AvaII GGWCC 4 cut(s) 512, 623, 734, 845
BaeGI GKGCMC 1 cut(s) 2665
BaeI ACNNNNGTAYC 2 cut(s) 85, 118
BalI TGGCCA 2 cut(s) 1835, 3140
BanI GGYRCC 1 cut(s) 2992
BanII GRGCYC 1 cut(s) 2652
BauI CACGAG 3 cut(s) 99, 2689, 2885
BbsI GAAGAC 2 cut(s) 348, 1743
Bbv12I GWGCWC 2 cut(s) 1456, 2652
BciT130I CCWGG 6 cut(s) 64, 1445, 2393, 2616, 2913, 2990
BciVI GTATCC 1 cut(s) 484
BclI TGATCA 1 cut(s) 193
BcoDI GTCTC 6 cut(s) 932, 1288, 1348, 1411, 1891, 3004
BfaI CTAG 6 cut(s) 425, 1134, 1943, 2270, 2292, 2405
BfmI CTRYAG 5 cut(s) 396, 1593, 2307, 2631, 3003
BfrI CTTAAG 1 cut(s) 1931
BfuI GTATCC 1 cut(s) 484
BglI GCCNNNNNGGC 3 cut(s) 1697, 2414, 2669
BglII AGATCT 1 cut(s) 2425
BlpI GCTNAGC 2 cut(s) 1083, 2651
BmcAI AGTACT 1 cut(s) 2476
Bme1390I CCNGG 6 cut(s) 64, 1445, 2393, 2616, 2913, 2990
Bme18I GGWCC 4 cut(s) 512, 623, 734, 845
BmgT120I GGNCC 4 cut(s) 512, 623, 734, 845
BmiI GGNNCC 1 cut(s) 2994
BmrFI CCNGG 6 cut(s) 64, 1445, 2393, 2616, 2913, 2990
BmsI GCATC 7 cut(s) 199, 1718, 2258, 2273, 2320, 2590, 3050
BmtI GCTAGC 1 cut(s) 1137
BpiI GAAGAC 2 cut(s) 348, 1743
BplI GAGNNNNNCTC 4 cut(s) 2053, 2085, 2610, 2642
BpmI CTGGAG 6 cut(s) 885, 1018, 1340, 1466, 2487, 2637
Bpu10I CCTNAGC 1 cut(s) 1923
Bpu1102I GCTNAGC 2 cut(s) 1083, 2651
Bpu14I TTCGAA 1 cut(s) 1218
BpuEI CTTGAG 1 cut(s) 1586
BsaAI YACGTR 1 cut(s) 3011
BsaBI GATNNNNATC 1 cut(s) 1851
BsaWI WCCGGW 2 cut(s) 1342, 2056
BsaXI ACNNNNNCTCC 8 cut(s) 883, 913, 1054, 1084, 1195, 1225, 1242, 1272
Bsc4I CCNNNNNNNGG 6 cut(s) 1288, 1503, 1581, 2229, 2398, 2838
Bse1I ACTGG 4 cut(s) 1323, 1542, 2286, 3061
Bse3DI GCAATG 3 cut(s) 1701, 2561, 2817
Bse8I GATNNNNATC 1 cut(s) 1851
BseAI TCCGGA 1 cut(s) 1342
BseBI CCWGG 6 cut(s) 64, 1445, 2393, 2616, 2913, 2990
BseGI GGATG 8 cut(s) 139, 176, 214, 337, 998, 1709, 2811, 3068
BseJI GATNNNNATC 1 cut(s) 1851
BseLI CCNNNNNNNGG 6 cut(s) 1288, 1503, 1581, 2229, 2398, 2838
BseMI GCAATG 3 cut(s) 1701, 2561, 2817
BseNI ACTGG 4 cut(s) 1323, 1542, 2286, 3061
BseRI GAGGAG 5 cut(s) 1349, 1637, 1898, 1901, 2690
BseSI GKGCMC 1 cut(s) 2665
BsgI GTGCAG 4 cut(s) 276, 1622, 1767, 3153
Bsh1236I CGCG 1 cut(s) 12
BshFI GGCC 7 cut(s) 1194, 1541, 1700, 1835, 1958, 2831, 3140
BshNI GGYRCC 1 cut(s) 2992
BsiHKAI GWGCWC 2 cut(s) 1456, 2652
BsiSI CCGG 2 cut(s) 1343, 2057
BslI CCNNNNNNNGG 6 cut(s) 1288, 1503, 1581, 2229, 2398, 2838
BsmAI GTCTC 6 cut(s) 932, 1288, 1348, 1411, 1891, 3004
BsmBI CGTCTC 2 cut(s) 1288, 1348
BsnI GGCC 7 cut(s) 1194, 1541, 1700, 1835, 1958, 2831, 3140
Bsp119I TTCGAA 1 cut(s) 1218
Bsp1286I GDGCHC 3 cut(s) 1456, 2652, 2665
Bsp13I TCCGGA 1 cut(s) 1342
Bsp143I GATC 7 cut(s) 193, 414, 1358, 1927, 2425, 2452, 2585
Bsp1720I GCTNAGC 2 cut(s) 1083, 2651
BspACI CCGC 3 cut(s) 2595, 2612, 2700
BspANI GGCC 7 cut(s) 1194, 1541, 1700, 1835, 1958, 2831, 3140
BspEI TCCGGA 1 cut(s) 1342
BspFNI CGCG 1 cut(s) 12
BspLI GGNNCC 1 cut(s) 2994
BspMAI CTGCAG 3 cut(s) 400, 1597, 3007
BspOI GCTAGC 1 cut(s) 1137
BspPI GGATC 4 cut(s) 409, 1353, 1935, 2580
BspT104I TTCGAA 1 cut(s) 1218
BspT107I GGYRCC 1 cut(s) 2992
BspTI CTTAAG 1 cut(s) 1931
BsrDI GCAATG 3 cut(s) 1701, 2561, 2817
BsrI ACTGG 4 cut(s) 1323, 1542, 2286, 3061
BssMI GATC 7 cut(s) 193, 414, 1358, 1927, 2425, 2452, 2585
BssSI CACGAG 3 cut(s) 99, 2689, 2885
BssT1I CCWWGG 7 cut(s) 1554, 1575, 1713, 1836, 2727, 2832, 2945
Bst2BI CACGAG 3 cut(s) 99, 2689, 2885
Bst2UI CCWGG 6 cut(s) 64, 1445, 2393, 2616, 2913, 2990
Bst6I CTCTTC 7 cut(s) 558, 669, 780, 1409, 1458, 1506, 1689
BstAFI CTTAAG 1 cut(s) 1931
BstAPI GCANNNNNTGC 3 cut(s) 299, 1790, 2093
BstBAI YACGTR 1 cut(s) 3011
BstBI TTCGAA 1 cut(s) 1218
BstC8I GCNNGC 7 cut(s) 1089, 1135, 1878, 2373, 2580, 2682, 3153
BstDSI CCRYGG 1 cut(s) 3119
BstF5I GGATG 8 cut(s) 139, 176, 214, 337, 998, 1709, 2811, 3068
BstFNI CGCG 1 cut(s) 12
BstHHI GCGC 1 cut(s) 12
BstKTI GATC 7 cut(s) 196, 417, 1361, 1930, 2428, 2455, 2588
BstMAI GTCTC 6 cut(s) 932, 1288, 1348, 1411, 1891, 3004
BstMBI GATC 7 cut(s) 193, 414, 1358, 1927, 2425, 2452, 2585
BstNI CCWGG 6 cut(s) 64, 1445, 2393, 2616, 2913, 2990
BstNSI RCATGY 2 cut(s) 1790, 3155
BstSCI CCNGG 6 cut(s) 62, 1443, 2391, 2614, 2911, 2988
BstSFI CTRYAG 5 cut(s) 396, 1593, 2307, 2631, 3003
BstSLI GKGCMC 1 cut(s) 2665
BstUI CGCG 1 cut(s) 12
BstV2I GAAGAC 2 cut(s) 348, 1743
BstX2I RGATCY 3 cut(s) 414, 1927, 2425
BstXI CCANNNNNNTGG 1 cut(s) 122
BstYI RGATCY 3 cut(s) 414, 1927, 2425
BsuI GTATCC 1 cut(s) 484
BsuRI GGCC 7 cut(s) 1194, 1541, 1700, 1835, 1958, 2831, 3140
BtgI CCRYGG 1 cut(s) 3119
BtgZI GCGATG 1 cut(s) 27
BtsCI GGATG 8 cut(s) 139, 176, 214, 337, 998, 1709, 2811, 3068
BtsI GCAGTG 2 cut(s) 1602, 1634
BtsIMutI CAGTG 8 cut(s) 1084, 1168, 1549, 1602, 1634, 2026, 2259, 3054
Cac8I GCNNGC 7 cut(s) 1089, 1135, 1878, 2373, 2580, 2682, 3153
CaiI CAGNNNCTG 5 cut(s) 290, 442, 968, 2258, 2863
CfoI GCGC 1 cut(s) 12
Cfr13I GGNCC 4 cut(s) 512, 623, 734, 845
CseI GACGC 1 cut(s) 1305
CsiI ACCWGGT 1 cut(s) 2911
Csp6I GTAC 4 cut(s) 78, 2402, 2475, 3008
CviAII CATG 9 cut(s) 188, 233, 1006, 1675, 1787, 1831, 2666, 3038, 3152
CviQI GTAC 4 cut(s) 78, 2402, 2475, 3008
DpnI GATC 7 cut(s) 195, 416, 1360, 1929, 2427, 2454, 2587
DpnII GATC 7 cut(s) 193, 414, 1358, 1927, 2425, 2452, 2585
DraI TTTAAA 1 cut(s) 1974
DraIII CACNNNGTG 1 cut(s) 299
DrdI GACNNNNNNGTC 1 cut(s) 1768
DseDI GACNNNNNNGTC 1 cut(s) 1768
EaeI YGGCCR 2 cut(s) 1833, 3138
Eam1104I CTCTTC 7 cut(s) 558, 669, 780, 1409, 1458, 1506, 1689
EarI CTCTTC 7 cut(s) 558, 669, 780, 1409, 1458, 1506, 1689
Ecl136II GAGCTC 1 cut(s) 2650
Eco130I CCWWGG 7 cut(s) 1554, 1575, 1713, 1836, 2727, 2832, 2945
Eco147I AGGCCT 1 cut(s) 1194
Eco24I GRGCYC 1 cut(s) 2652
Eco47I GGWCC 4 cut(s) 512, 623, 734, 845
Eco53kI GAGCTC 1 cut(s) 2650
EcoICRI GAGCTC 1 cut(s) 2650
EcoRI GAATTC 1 cut(s) 274
EcoRII CCWGG 6 cut(s) 62, 1443, 2391, 2614, 2911, 2988
EcoT14I CCWWGG 7 cut(s) 1554, 1575, 1713, 1836, 2727, 2832, 2945
EcoT22I ATGCAT 1 cut(s) 3043
EcoT38I GRGCYC 1 cut(s) 2652
ErhI CCWWGG 7 cut(s) 1554, 1575, 1713, 1836, 2727, 2832, 2945
Esp3I CGTCTC 2 cut(s) 1288, 1348
FaeI CATG 9 cut(s) 191, 236, 1009, 1678, 1790, 1834, 2669, 3041, 3155
FatI CATG 9 cut(s) 187, 232, 1005, 1674, 1786, 1830, 2665, 3037, 3151
FauI CCCGC 1 cut(s) 2602
FbaI TGATCA 1 cut(s) 193
FblI GTMKAC 5 cut(s) 470, 636, 692, 747, 803
FokI GGATG 8 cut(s) 146, 163, 221, 324, 985, 1696, 2818, 3055
FriOI GRGCYC 1 cut(s) 2652
FspBI CTAG 6 cut(s) 425, 1134, 1943, 2270, 2292, 2405
GlaI GCGC 1 cut(s) 11
GsuI CTGGAG 6 cut(s) 885, 1018, 1340, 1466, 2487, 2637
HaeIII GGCC 7 cut(s) 1194, 1541, 1700, 1835, 1958, 2831, 3140
HapII CCGG 2 cut(s) 1343, 2057
HgaI GACGC 1 cut(s) 1305
HhaI GCGC 1 cut(s) 12
Hin1II CATG 9 cut(s) 191, 236, 1009, 1678, 1790, 1834, 2669, 3041, 3155
Hin6I GCGC 1 cut(s) 10
HinP1I GCGC 1 cut(s) 10
HincII GTYRAC 9 cut(s) 369, 471, 526, 637, 693, 748, 804, 859, 985
HindII GTYRAC 9 cut(s) 369, 471, 526, 637, 693, 748, 804, 859, 985
HindIII AAGCTT 3 cut(s) 1436, 2746, 2900
HpaI GTTAAC 1 cut(s) 369
HpaII CCGG 2 cut(s) 1343, 2057
HphI GGTGA 3 cut(s) 1107, 2601, 2918
Hpy99I CGWCG 1 cut(s) 2898
HpyAV CCTTC 8 cut(s) 829, 1390, 2101, 2234, 2314, 2812, 2821, 2831
HpyCH4IV ACGT 3 cut(s) 2659, 3010, 3172
HpySE526I ACGT 3 cut(s) 2659, 3010, 3172
Hsp92II CATG 9 cut(s) 191, 236, 1009, 1678, 1790, 1834, 2669, 3041, 3155
HspAI GCGC 1 cut(s) 10
Kpn2I TCCGGA 1 cut(s) 1342
Ksp22I TGATCA 1 cut(s) 193
KspAI GTTAAC 1 cut(s) 369
Kzo9I GATC 7 cut(s) 193, 414, 1358, 1927, 2425, 2452, 2585
LweI GCATC 7 cut(s) 199, 1718, 2258, 2273, 2320, 2590, 3050
MabI ACCWGGT 1 cut(s) 2911
MaeI CTAG 6 cut(s) 425, 1134, 1943, 2270, 2292, 2405
MaeII ACGT 3 cut(s) 2659, 3010, 3172
MalI GATC 7 cut(s) 195, 416, 1360, 1929, 2427, 2454, 2587
MboI GATC 7 cut(s) 193, 414, 1358, 1927, 2425, 2452, 2585
MfeI CAATTG 1 cut(s) 2145
MflI RGATCY 3 cut(s) 414, 1927, 2425
MhlI GDGCHC 3 cut(s) 1456, 2652, 2665
MlsI TGGCCA 2 cut(s) 1835, 3140
MluNI TGGCCA 2 cut(s) 1835, 3140
MlyI GAGTC 7 cut(s) 37, 1167, 1477, 1478, 1778, 1787, 2741
MmeI TCCRAC 7 cut(s) 204, 365, 581, 692, 803, 914, 2739
Mox20I TGGCCA 2 cut(s) 1835, 3140
Mph1103I ATGCAT 1 cut(s) 3043
MroI TCCGGA 1 cut(s) 1342
MscI TGGCCA 2 cut(s) 1835, 3140
MseI TTAA 9 cut(s) 263, 368, 1227, 1440, 1617, 1902, 1932, 1973, 2165
MslI CAYNNNNRTG 1 cut(s) 189
Msp20I TGGCCA 2 cut(s) 1835, 3140
MspA1I CMGCKG 4 cut(s) 1592, 2597, 2702, 2924
MspCI CTTAAG 1 cut(s) 1931
MspI CCGG 2 cut(s) 1343, 2057
MspR9I CCNGG 6 cut(s) 64, 1445, 2393, 2616, 2913, 2990
MunI CAATTG 1 cut(s) 2145
MvaI CCWGG 6 cut(s) 64, 1445, 2393, 2616, 2913, 2990
MvnI CGCG 1 cut(s) 12
NdeII GATC 7 cut(s) 193, 414, 1358, 1927, 2425, 2452, 2585
NheI GCTAGC 1 cut(s) 1133
NlaIII CATG 9 cut(s) 191, 236, 1009, 1678, 1790, 1834, 2669, 3041, 3155
NlaIV GGNNCC 1 cut(s) 2994
NmeAIII GCCGAG 2 cut(s) 1934, 2159
NmuCI GTSAC 4 cut(s) 1597, 1660, 3011, 3052
NsiI ATGCAT 1 cut(s) 3043
NspI RCATGY 2 cut(s) 1790, 3155
NspV TTCGAA 1 cut(s) 1218
PaeI GCATGC 1 cut(s) 3155
PceI AGGCCT 1 cut(s) 1194
PflFI GACNNNGTC 1 cut(s) 2293
PflMI CCANNNNNTGG 1 cut(s) 1288
PleI GAGTC 7 cut(s) 36, 1166, 1476, 1478, 1777, 1786, 2740
PpsI GAGTC 7 cut(s) 36, 1166, 1476, 1478, 1777, 1786, 2740
Ppu21I YACGTR 1 cut(s) 3011
Psp124BI GAGCTC 1 cut(s) 2652
Psp6I CCWGG 6 cut(s) 62, 1443, 2391, 2614, 2911, 2988
PspGI CCWGG 6 cut(s) 62, 1443, 2391, 2614, 2911, 2988
PspN4I GGNNCC 1 cut(s) 2994
PspPI GGNCC 4 cut(s) 512, 623, 734, 845
PsrI GAACNNNNNNTAC 2 cut(s) 1030, 1062
PstI CTGCAG 3 cut(s) 400, 1597, 3007
PstNI CAGNNNCTG 5 cut(s) 290, 442, 968, 2258, 2863
PsuI RGATCY 3 cut(s) 414, 1927, 2425
PsyI GACNNNGTC 1 cut(s) 2293
PvuII CAGCTG 2 cut(s) 1592, 2924
RsaI GTAC 4 cut(s) 79, 2403, 2476, 3009
RsaNI GTAC 4 cut(s) 78, 2402, 2475, 3008
RseI CAYNNNNRTG 1 cut(s) 189
SacI GAGCTC 1 cut(s) 2652
SalI GTCGAC 5 cut(s) 469, 635, 691, 746, 802
SaqAI TTAA 9 cut(s) 263, 368, 1227, 1440, 1617, 1902, 1932, 1973, 2165
Sau3AI GATC 7 cut(s) 193, 414, 1358, 1927, 2425, 2452, 2585
Sau96I GGNCC 4 cut(s) 512, 623, 734, 845
ScaI AGTACT 1 cut(s) 2476
SchI GAGTC 7 cut(s) 37, 1167, 1477, 1478, 1778, 1787, 2741
ScrFI CCNGG 6 cut(s) 64, 1445, 2393, 2616, 2913, 2990
SduI GDGCHC 3 cut(s) 1456, 2652, 2665
SexAI ACCWGGT 1 cut(s) 2911
SfaNI GCATC 7 cut(s) 199, 1718, 2258, 2273, 2320, 2590, 3050
SfcI CTRYAG 5 cut(s) 396, 1593, 2307, 2631, 3003
SfuI TTCGAA 1 cut(s) 1218
SinI GGWCC 4 cut(s) 512, 623, 734, 845
SmiMI CAYNNNNRTG 1 cut(s) 189
SmlI CTYRAG 2 cut(s) 1565, 1931
SmoI CTYRAG 2 cut(s) 1565, 1931
SphI GCATGC 1 cut(s) 3155
SseBI AGGCCT 1 cut(s) 1194
SsiI CCGC 3 cut(s) 2595, 2612, 2700
SspMI CTAG 6 cut(s) 425, 1134, 1943, 2270, 2292, 2405
SstI GAGCTC 1 cut(s) 2652
StuI AGGCCT 1 cut(s) 1194
StyD4I CCNGG 6 cut(s) 62, 1443, 2391, 2614, 2911, 2988
StyI CCWWGG 7 cut(s) 1554, 1575, 1713, 1836, 2727, 2832, 2945
TaiI ACGT 3 cut(s) 2662, 3013, 3175
TatI WGTACW 2 cut(s) 77, 2474
TauI GCSGC 1 cut(s) 2702
Tru1I TTAA 9 cut(s) 263, 368, 1227, 1440, 1617, 1902, 1932, 1973, 2165
Tru9I TTAA 9 cut(s) 263, 368, 1227, 1440, 1617, 1902, 1932, 1973, 2165
TscAI CASTG 8 cut(s) 1084, 1168, 1549, 1602, 1641, 2026, 2259, 3061
TseFI GTSAC 4 cut(s) 1597, 1660, 3011, 3052
Tsp45I GTSAC 4 cut(s) 1597, 1660, 3011, 3052
TspDTI ATGAA 1 cut(s) 2333
TspGWI ACGGA 3 cut(s) 342, 950, 3136
TspRI CASTG 8 cut(s) 1084, 1168, 1549, 1602, 1641, 2026, 2259, 3061
Tth111I GACNNNGTC 1 cut(s) 2293
Van91I CCANNNNNTGG 1 cut(s) 1288
Vha464I CTTAAG 1 cut(s) 1931
VpaK11BI GGWCC 4 cut(s) 512, 623, 734, 845
XapI RAATTY 3 cut(s) 274, 1244, 1911
XbaI TCTAGA 2 cut(s) 424, 2269
XceI RCATGY 2 cut(s) 1790, 3155
XcmI CCANNNNNNNNNTGG 2 cut(s) 1504, 2341
XmiI GTMKAC 5 cut(s) 470, 636, 692, 747, 803
XspI CTAG 6 cut(s) 425, 1134, 1943, 2270, 2292, 2405
ZrmI AGTACT 1 cut(s) 2476
Zsp2I ATGCAT 1 cut(s) 3043
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.