Rw7G024600

No description available

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Forward (+)
30358652 .. 30360376
1725 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G024600.1

Sequence Viewer

Length: 156 bp
ATGGCTTCCTTCACCTATAAAAGGAACTCTCCTCCCACTTACTCAACACTCCATTACACACTTTCATGTTTACAACAATGCAAAAATATTATTAGCATCCACATTACAAGTACATGCCACACATGCCATGTTTCTATTAAATTACACTCTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

51

Amino Acids

5.81

Weight (kDa)

9.13

Isoelectric Point (pI)

86.86

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0022699)

Species Orthologous Gene IDs
rosa_chinensis RchiOBHm_Chr3g0496531
rosa_multiflora Rmu_sc0003801.1_g000002
rosa_roxburghii Rroxscaffold_2G00083980
rosa_wichuraiana Rw7G024600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 112
AfiI CCNNNNNNNGG 1 cut(s) 21
AsuHPI GGTGA 1 cut(s) 4
BmsI GCATC 1 cut(s) 105
Bsc4I CCNNNNNNNGG 1 cut(s) 21
BseGI GGATG 1 cut(s) 96
BseLI CCNNNNNNNGG 1 cut(s) 21
BseRI GAGGAG 1 cut(s) 21
BslI CCNNNNNNNGG 1 cut(s) 21
BstENI CCTNNNNNAGG 1 cut(s) 19
BstF5I GGATG 1 cut(s) 96
BstMWI GCNNNNNNNGC 1 cut(s) 123
BstNSI RCATGY 2 cut(s) 117, 126
BtsCI GGATG 1 cut(s) 96
Csp6I GTAC 1 cut(s) 111
CviAII CATG 4 cut(s) 66, 114, 123, 128
CviJI RGCY 1 cut(s) 5
CviKI_1 RGCY 1 cut(s) 5
CviQI GTAC 1 cut(s) 111
EcoNI CCTNNNNNAGG 1 cut(s) 19
FaeI CATG 4 cut(s) 69, 117, 126, 131
FaiI YATR 5 cut(s) 18, 67, 115, 124, 129
FatI CATG 4 cut(s) 65, 113, 122, 127
FokI GGATG 1 cut(s) 83
Hin1II CATG 4 cut(s) 69, 117, 126, 131
HphI GGTGA 1 cut(s) 4
Hpy166II GTNNAC 1 cut(s) 71
Hpy8I GTNNAC 1 cut(s) 71
HpyAV CCTTC 1 cut(s) 19
HpyCH4V TGCA 1 cut(s) 81
HpyF10VI GCNNNNNNNGC 1 cut(s) 123
Hsp92II CATG 4 cut(s) 69, 117, 126, 131
LweI GCATC 1 cut(s) 105
MluCI AATT 2 cut(s) 140, 151
MnlI CCTC 1 cut(s) 42
MseI TTAA 2 cut(s) 138, 154
MslI CAYNNNNRTG 1 cut(s) 64
MwoI GCNNNNNNNGC 1 cut(s) 123
NlaIII CATG 4 cut(s) 69, 117, 126, 131
NspI RCATGY 2 cut(s) 117, 126
RsaI GTAC 1 cut(s) 112
RsaNI GTAC 1 cut(s) 111
RseI CAYNNNNRTG 1 cut(s) 64
SaqAI TTAA 2 cut(s) 138, 154
SetI ASST 1 cut(s) 17
SfaNI GCATC 1 cut(s) 105
SgeI CNNG 5 cut(s) 78, 120, 126, 135, 140
SmiMI CAYNNNNRTG 1 cut(s) 64
Sse9I AATT 2 cut(s) 140, 151
SspI AATATT 1 cut(s) 88
TasI AATT 2 cut(s) 140, 151
TatI WGTACW 1 cut(s) 110
Tru1I TTAA 2 cut(s) 138, 154
Tru9I TTAA 2 cut(s) 138, 154
TspDTI ATGAA 1 cut(s) 54
XagI CCTNNNNNAGG 1 cut(s) 19
XceI RCATGY 2 cut(s) 117, 126
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.