AT1G03390

Transferase family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
841033 .. 842418
1386 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G03390.1

Sequence Viewer

Length: 1386 bp
ATGGCTTCTTGCATCCAAGAACTTCATTTCACTCACCTCCATATCCCAGTCACCATCAACCAGCAATTTCTTGTACATCCATCAAGTCCAACACCTGCAAATCAATCTCCTCACCATAGTCTCTATCTATCAAACCTAGATGATATAATCGGAGCACGAGTTTTCACTCCCTCCGTTTATTTCTATCCATCAACCAATAATCGAGAATCTTTTGTACTGAAACGGCTTCAAGATGCTCTTAGTGAGGTTTTAGTTCCGTATTATCCACTCTCTGGTAGGTTAAGAGAAGTGGAAAATGGGAAACTGGAAGTTTTCTTTGGAGAAGAGCAAGGTGTGTTAATGGTGTCGGCAAATTCATCAATGGATTTAGCTGATCTTGGAGATCTTACAGTTCCAAATCCAGCTTGGTTACCATTAATCTTTCGAAACCCAGGAGAAGAAGCTTACAAGATCCTCGAAATGCCGTTACTTATAGCTCAAGTAACGTTTTTCACCTGTGGTGGATTTAGCCTCGGGATTAGACTTTGCCATTGCATTTGTGATGGTTTTGGAGCTATGCAGTTTCTCGGCTCGTGGGCAGCTACAGCGAAAACCGGAAAATTGATTGCAGATCCTGAGCCGGTTTGGGATAGAGAGACTTTCAAACCAAGAAACCCTCCAATGGTGAAATACCCACATCATGAGTATCTTCCAATTGAAGAAAGATCGAATTTGACGAACTCCTTGTGGGATACAAAGCCATTGCAGAAATGTTACAGGATAAGCAAAGAGTTTCAGTGTCGTGTTAAAAGCATTGCTCAAGGAGAAGATCCAACCTTAGTTTGTAGCACGTTTGATGCAATGGCTGCACACATATGGAGATCATGGGTCAAAGCACTTGATGTGAAGCCACTGGATTACAATCTCAGGCTCACGTTTTCAGTCAACGTAAGAACAAGACTAGAAACCCTAAAGTTAAGAAAAGGTTTTTACGGCAATGTGGTGTGTTTGGCTTGCGCAATGAGCAGTGTCGAGAGTCTTATTAACGATTCTCTTTCTAAGACAACACGTTTGGTTCAGGATGCGAGACTTAGGGTTTCAGAGGATTACTTGCGTTCTATGGTGGATTACGTTGATGTAAAGAGGCCAAAGAGGTTAGAGTTTGGTGGGAAGCTAACGATAACGCAATGGACCCGGTTTGAAATGTATGAGACTGCGGATTTTGGATGGGGTAAACCGGTTTATGCAGGGCCAATTGACTTGAGGCCTACGCCACAGGTTTGCGTGTTGTTGCCACAAGGAGGAGTTGAGTCTGGCAATGACCAAAGCATGGTGGTTTGCCTTTGCTTGCCTCCTACTGCTGTTCATACCTTTACTCGGCTTCTATCTTTAAATGATCATAAATAA

Protein Analysis

461

Amino Acids

52.09

Weight (kDa)

6.86

Isoelectric Point (pI)

45.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 16 - 452 1.4e-72 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0015188)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G03390
fragaria_vesca FvH4_1g04300
malus_domestica MD02G1042700.v1.1 MD15G1181300.v1.1
prunus_persica Prupe.7G234200_v2.0.a1
pyrus_communis pycom15g16360
rosa_chinensis RchiOBHm_Chr2g0089951
rosa_laevigata RLG00000016063
rosa_multiflora Rmu_co8471249.1_g000001
rosa_roxburghii Rroxscaffold_2G00151520
rosa_rugosa Rorug02G0003700
rosa_samantha Rh2AG049100 Rh2BG048000 Rh2CG050100 Rh2DG049200
rosa_wichuraiana Rw2G004110

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 103
Acc16I TGCGCA 1 cut(s) 997
Acc36I ACCTGC 1 cut(s) 103
AccB7I CCANNNNNTGG 2 cut(s) 272, 1309
AciI CCGC 1 cut(s) 1196
AclI AACGTT 1 cut(s) 485
AclWI GGATC 3 cut(s) 445, 605, 803
AcsI RAATTY 2 cut(s) 352, 709
AfaI GTAC 2 cut(s) 75, 216
AfiI CCNNNNNNNGG 5 cut(s) 272, 661, 1280, 1309, 1356
AflIII ACRYGT 1 cut(s) 1046
AgeI ACCGGT 1 cut(s) 1216
AgsI TTSAA 4 cut(s) 230, 643, 698, 1181
AjnI CCWGG 1 cut(s) 430
AjuI GAANNNNNNNTTGG 2 cut(s) 300, 332
AluBI AGCT 7 cut(s) 371, 404, 443, 476, 554, 581, 1153
AluI AGCT 7 cut(s) 371, 404, 443, 476, 554, 581, 1153
Alw21I GWGCWC 1 cut(s) 157
Alw26I GTCTC 4 cut(s) 125, 629, 1060, 1184
AlwI GGATC 3 cut(s) 445, 605, 803
AlwNI CAGNNNCTG 1 cut(s) 614
Ama87I CYCGRG 1 cut(s) 512
AoxI GGCC 3 cut(s) 1124, 1229, 1244
ApeKI GCWGC 2 cut(s) 578, 845
ApoI RAATTY 2 cut(s) 352, 709
ArsI GACNNNNNNTTYG 2 cut(s) 1033, 1065
AseI ATTAAT 1 cut(s) 416
AsiGI ACCGGT 1 cut(s) 1216
AspLEI GCGC 1 cut(s) 998
AspS9I GGNCC 2 cut(s) 1170, 1229
AsuC2I CCSGG 1 cut(s) 1174
AsuHPI GGTGA 5 cut(s) 26, 43, 104, 484, 676
AsuII TTCGAA 1 cut(s) 424
AvaI CYCGRG 1 cut(s) 512
AvaII GGWCC 1 cut(s) 1170
BauI CACGAG 2 cut(s) 156, 571
Bbv12I GWGCWC 1 cut(s) 157
BbvI GCAGC 2 cut(s) 590, 832
BccI CCATC 5 cut(s) 62, 88, 196, 536, 1200
BceAI ACGGC 3 cut(s) 239, 448, 988
BciT130I CCWGG 1 cut(s) 432
BciVI GTATCC 1 cut(s) 724
BclI TGATCA 1 cut(s) 1375
BcnI CCSGG 1 cut(s) 1174
BcoDI GTCTC 4 cut(s) 125, 629, 1060, 1184
BfaI CTAG 2 cut(s) 137, 941
BfmI CTRYAG 1 cut(s) 582
BfuAI ACCTGC 1 cut(s) 103
BfuI GTATCC 1 cut(s) 724
BglII AGATCT 1 cut(s) 382
BisI GCNGC 2 cut(s) 579, 846
BlsI GCNGC 2 cut(s) 580, 847
Bme1390I CCNGG 2 cut(s) 432, 1174
Bme18I GGWCC 1 cut(s) 1170
BmeT110I CYCGRG 1 cut(s) 512
BmgT120I GGNCC 2 cut(s) 1170, 1229
BmiI GGNNCC 1 cut(s) 1172
BmrFI CCNGG 2 cut(s) 432, 1174
BmrI ACTGGG 1 cut(s) 41
BmsI GCATC 4 cut(s) 21, 223, 826, 1051
BmuI ACTGGG 1 cut(s) 41
Bpu10I CCTNAGC 1 cut(s) 615
Bpu14I TTCGAA 1 cut(s) 424
BpuEI CTTGAG 3 cut(s) 462, 783, 1261
BpuMI CCSGG 1 cut(s) 1174
BsaBI GATNNNNATC 1 cut(s) 900
BsaJI CCNNGG 2 cut(s) 430, 511
BsaWI WCCGGW 2 cut(s) 593, 1216
BsaXI ACNNNNNCTCC 2 cut(s) 144, 174
Bsc4I CCNNNNNNNGG 5 cut(s) 272, 661, 1280, 1309, 1356
Bse118I RCCGGY 2 cut(s) 619, 1216
Bse1I ACTGG 3 cut(s) 47, 309, 897
Bse3DI GCAATG 8 cut(s) 529, 740, 792, 846, 982, 1005, 1172, 1303
Bse8I GATNNNNATC 1 cut(s) 900
BseBI CCWGG 1 cut(s) 432
BseDI CCNNGG 2 cut(s) 430, 511
BseGI GGATG 4 cut(s) 12, 76, 1066, 1211
BseJI GATNNNNATC 1 cut(s) 900
BseLI CCNNNNNNNGG 5 cut(s) 272, 661, 1280, 1309, 1356
BseMI GCAATG 8 cut(s) 529, 740, 792, 846, 982, 1005, 1172, 1303
BseMII CTCAG 2 cut(s) 606, 919
BseNI ACTGG 3 cut(s) 47, 309, 897
BseRI GAGGAG 2 cut(s) 99, 1296
BseXI GCAGC 2 cut(s) 590, 832
BsgI GTGCAG 1 cut(s) 831
BshFI GGCC 3 cut(s) 1126, 1231, 1246
BshTI ACCGGT 1 cut(s) 1216
BsiHKAI GWGCWC 1 cut(s) 157
BsiHKCI CYCGRG 1 cut(s) 512
BsiSI CCGG 4 cut(s) 594, 620, 1174, 1217
BslI CCNNNNNNNGG 5 cut(s) 272, 661, 1280, 1309, 1356
BsmAI GTCTC 4 cut(s) 125, 629, 1060, 1184
BsnI GGCC 3 cut(s) 1126, 1231, 1246
BsoBI CYCGRG 1 cut(s) 512
Bsp119I TTCGAA 1 cut(s) 424
Bsp1286I GDGCHC 1 cut(s) 157
Bsp1407I TGTACA 1 cut(s) 73
Bsp143I GATC 8 cut(s) 373, 382, 450, 610, 704, 808, 860, 1375
BspACI CCGC 1 cut(s) 1196
BspANI GGCC 3 cut(s) 1126, 1231, 1246
BspCNI CTCAG 2 cut(s) 607, 918
BspHI TCATGA 1 cut(s) 679
BspLI GGNNCC 1 cut(s) 1172
BspMI ACCTGC 1 cut(s) 103
BspPI GGATC 3 cut(s) 445, 605, 803
BspQI GCTCTTC 1 cut(s) 318
BspT104I TTCGAA 1 cut(s) 424
BsrDI GCAATG 8 cut(s) 529, 740, 792, 846, 982, 1005, 1172, 1303
BsrFI RCCGGY 2 cut(s) 619, 1216
BsrGI TGTACA 1 cut(s) 73
BsrI ACTGG 3 cut(s) 47, 309, 897
BssAI RCCGGY 2 cut(s) 619, 1216
BssECI CCNNGG 2 cut(s) 430, 511
BssMI GATC 8 cut(s) 373, 382, 450, 610, 704, 808, 860, 1375
BssSI CACGAG 2 cut(s) 156, 571
Bst2BI CACGAG 2 cut(s) 156, 571
Bst2UI CCWGG 1 cut(s) 432
Bst4CI ACNGT 1 cut(s) 391
Bst6I CTCTTC 1 cut(s) 318
BstAPI GCANNNNNTGC 1 cut(s) 845
BstAUI TGTACA 1 cut(s) 73
BstBI TTCGAA 1 cut(s) 424
BstC8I GCNNGC 2 cut(s) 994, 1328
BstDEI CTNAG 6 cut(s) 239, 615, 817, 905, 1038, 1070
BstEII GGTNACC 1 cut(s) 408
BstF5I GGATG 4 cut(s) 12, 76, 1066, 1211
BstHHI GCGC 1 cut(s) 998
BstKTI GATC 8 cut(s) 376, 385, 453, 613, 707, 811, 863, 1378
BstMAI GTCTC 4 cut(s) 125, 629, 1060, 1184
BstMBI GATC 8 cut(s) 373, 382, 450, 610, 704, 808, 860, 1375
BstMWI GCNNNNNNNGC 3 cut(s) 584, 845, 1002
BstNI CCWGG 1 cut(s) 432
BstPI GGTNACC 1 cut(s) 408
BstSCI CCNGG 2 cut(s) 430, 1172
BstSFI CTRYAG 1 cut(s) 582
BstV1I GCAGC 2 cut(s) 590, 832
BstX2I RGATCY 4 cut(s) 382, 450, 610, 808
BstYI RGATCY 4 cut(s) 382, 450, 610, 808
BsuI GTATCC 1 cut(s) 724
BsuRI GGCC 3 cut(s) 1126, 1231, 1246
BtsCI GGATG 4 cut(s) 12, 76, 1066, 1211
BtsI GCAGTG 1 cut(s) 1012
BtsIMutI CAGTG 3 cut(s) 782, 890, 1012
BveI ACCTGC 1 cut(s) 103
Cac8I GCNNGC 2 cut(s) 994, 1328
CaiI CAGNNNCTG 1 cut(s) 614
CciI TCATGA 1 cut(s) 679
CfoI GCGC 1 cut(s) 998
Cfr10I RCCGGY 2 cut(s) 619, 1216
Cfr13I GGNCC 2 cut(s) 1170, 1229
Csp6I GTAC 2 cut(s) 74, 215
CspAI ACCGGT 1 cut(s) 1216
CviAII CATG 3 cut(s) 680, 864, 1309
CviQI GTAC 2 cut(s) 74, 215
DdeI CTNAG 6 cut(s) 239, 615, 817, 905, 1038, 1070
DpnI GATC 8 cut(s) 375, 384, 452, 612, 706, 810, 862, 1377
DpnII GATC 8 cut(s) 373, 382, 450, 610, 704, 808, 860, 1375
DraI TTTAAA 1 cut(s) 1371
Eam1104I CTCTTC 1 cut(s) 318
EarI CTCTTC 1 cut(s) 318
Eco147I AGGCCT 1 cut(s) 1246
Eco47I GGWCC 1 cut(s) 1170
Eco88I CYCGRG 1 cut(s) 512
Eco91I GGTNACC 1 cut(s) 408
EcoO65I GGTNACC 1 cut(s) 408
EcoRII CCWGG 1 cut(s) 430
FaeI CATG 3 cut(s) 683, 867, 1312
FalI AAGNNNNNCTT 2 cut(s) 222, 254
FatI CATG 3 cut(s) 679, 863, 1308
FauNDI CATATG 1 cut(s) 854
FbaI TGATCA 1 cut(s) 1375
Fnu4HI GCNGC 2 cut(s) 579, 846
FokI GGATG 3 cut(s) 63, 1073, 1218
Fsp4HI GCNGC 2 cut(s) 579, 846
FspBI CTAG 2 cut(s) 137, 941
FspI TGCGCA 1 cut(s) 997
GlaI GCGC 1 cut(s) 997
GluI GCNGC 2 cut(s) 579, 846
HaeIII GGCC 3 cut(s) 1126, 1231, 1246
HapII CCGG 4 cut(s) 594, 620, 1174, 1217
HhaI GCGC 1 cut(s) 998
Hin1II CATG 3 cut(s) 683, 867, 1312
Hin6I GCGC 1 cut(s) 996
HinP1I GCGC 1 cut(s) 996
HincII GTYRAC 1 cut(s) 925
HindII GTYRAC 1 cut(s) 925
HindIII AAGCTT 1 cut(s) 441
HinfI GANTC 4 cut(s) 206, 1015, 1028, 1289
HpaII CCGG 4 cut(s) 594, 620, 1174, 1217
HphI GGTGA 5 cut(s) 26, 43, 104, 484, 676
Hpy166II GTNNAC 2 cut(s) 925, 1214
Hpy188I TCNGA 2 cut(s) 152, 1081
Hpy188III TCNNGA 7 cut(s) 203, 230, 514, 614, 680, 1012, 1058
Hpy8I GTNNAC 2 cut(s) 925, 1214
HpyCH4III ACNGT 1 cut(s) 391
HpyCH4IV ACGT 6 cut(s) 485, 830, 914, 927, 1048, 1110
HpyCH4V TGCA 9 cut(s) 12, 98, 534, 559, 608, 745, 839, 848, 1226
HpyF10VI GCNNNNNNNGC 3 cut(s) 584, 845, 1002
HpyF3I CTNAG 6 cut(s) 239, 615, 817, 905, 1038, 1070
HpySE526I ACGT 6 cut(s) 485, 830, 914, 927, 1048, 1110
Hsp92II CATG 3 cut(s) 683, 867, 1312
HspAI GCGC 1 cut(s) 996
Ksp22I TGATCA 1 cut(s) 1375
Kzo9I GATC 8 cut(s) 373, 382, 450, 610, 704, 808, 860, 1375
LguI GCTCTTC 1 cut(s) 318
LmnI GCTCC 2 cut(s) 152, 551
Lsp1109I GCAGC 2 cut(s) 590, 832
LweI GCATC 4 cut(s) 21, 223, 826, 1051
MaeI CTAG 2 cut(s) 137, 941
MaeII ACGT 6 cut(s) 485, 830, 914, 927, 1048, 1110
MaeIII GTNAC 5 cut(s) 49, 408, 465, 481, 752
MalI GATC 8 cut(s) 375, 384, 452, 612, 706, 810, 862, 1377
MboI GATC 8 cut(s) 373, 382, 450, 610, 704, 808, 860, 1375
MboII GAAGA 5 cut(s) 335, 449, 680, 710, 818
MfeI CAATTG 2 cut(s) 693, 1233
MflI RGATCY 4 cut(s) 382, 450, 610, 808
MhlI GDGCHC 1 cut(s) 157
MluCI AATT 6 cut(s) 65, 352, 599, 693, 709, 1233
MlyI GAGTC 2 cut(s) 1024, 1298
MmeI TCCRAC 2 cut(s) 113, 836
MseI TTAA 7 cut(s) 281, 338, 416, 786, 956, 1023, 1370
MslI CAYNNNNRTG 1 cut(s) 853
MspI CCGG 4 cut(s) 594, 620, 1174, 1217
MspR9I CCNGG 2 cut(s) 432, 1174
MunI CAATTG 2 cut(s) 693, 1233
MvaI CCWGG 1 cut(s) 432
MwoI GCNNNNNNNGC 3 cut(s) 584, 845, 1002
NciI CCSGG 1 cut(s) 1174
NdeI CATATG 1 cut(s) 854
NdeII GATC 8 cut(s) 373, 382, 450, 610, 704, 808, 860, 1375
NlaIII CATG 3 cut(s) 683, 867, 1312
NlaIV GGNNCC 1 cut(s) 1172
NmeAIII GCCGAG 2 cut(s) 546, 1336
NmuCI GTSAC 1 cut(s) 49
NsbI TGCGCA 1 cut(s) 997
NspV TTCGAA 1 cut(s) 424
PagI TCATGA 1 cut(s) 679
PaqCI CACCTGC 1 cut(s) 103
PceI AGGCCT 1 cut(s) 1246
PciSI GCTCTTC 1 cut(s) 318
PcsI WCGNNNNNNNCGW 1 cut(s) 713
PfeI GAWTC 2 cut(s) 206, 1028
PflMI CCANNNNNTGG 2 cut(s) 272, 1309
PinAI ACCGGT 1 cut(s) 1216
PkrI GCNGC 2 cut(s) 580, 847
PleI GAGTC 2 cut(s) 1023, 1297
PpsI GAGTC 2 cut(s) 1023, 1297
PshBI ATTAAT 1 cut(s) 416
Psp1406I AACGTT 1 cut(s) 485
Psp6I CCWGG 1 cut(s) 430
PspEI GGTNACC 1 cut(s) 408
PspGI CCWGG 1 cut(s) 430
PspN4I GGNNCC 1 cut(s) 1172
PspPI GGNCC 2 cut(s) 1170, 1229
PstNI CAGNNNCTG 1 cut(s) 614
PsuI RGATCY 4 cut(s) 382, 450, 610, 808
RsaI GTAC 2 cut(s) 75, 216
RsaNI GTAC 2 cut(s) 74, 215
RseI CAYNNNNRTG 1 cut(s) 853
SapI GCTCTTC 1 cut(s) 318
SaqAI TTAA 7 cut(s) 281, 338, 416, 786, 956, 1023, 1370
SatI GCNGC 2 cut(s) 579, 846
Sau3AI GATC 8 cut(s) 373, 382, 450, 610, 704, 808, 860, 1375
Sau96I GGNCC 2 cut(s) 1170, 1229
SchI GAGTC 2 cut(s) 1024, 1298
ScrFI CCNGG 2 cut(s) 432, 1174
SduI GDGCHC 1 cut(s) 157
SfaNI GCATC 4 cut(s) 21, 223, 826, 1051
SfcI CTRYAG 1 cut(s) 582
SfuI TTCGAA 1 cut(s) 424
SinI GGWCC 1 cut(s) 1170
SmiMI CAYNNNNRTG 1 cut(s) 853
SmlI CTYRAG 3 cut(s) 477, 798, 1240
SmoI CTYRAG 3 cut(s) 477, 798, 1240
Sse9I AATT 6 cut(s) 65, 352, 599, 693, 709, 1233
SseBI AGGCCT 1 cut(s) 1246
SsiI CCGC 1 cut(s) 1196
SspMI CTAG 2 cut(s) 137, 941
StuI AGGCCT 1 cut(s) 1246
StyD4I CCNGG 2 cut(s) 430, 1172
TaaI ACNGT 1 cut(s) 391
TaiI ACGT 6 cut(s) 488, 833, 917, 930, 1051, 1113
TaqI TCGA 5 cut(s) 202, 424, 456, 707, 1011
TasI AATT 6 cut(s) 65, 352, 599, 693, 709, 1233
TatI WGTACW 2 cut(s) 73, 214
TfiI GAWTC 2 cut(s) 206, 1028
Tru1I TTAA 7 cut(s) 281, 338, 416, 786, 956, 1023, 1370
Tru9I TTAA 7 cut(s) 281, 338, 416, 786, 956, 1023, 1370
TscAI CASTG 3 cut(s) 782, 897, 1012
TseFI GTSAC 1 cut(s) 49
TseI GCWGC 2 cut(s) 578, 845
Tsp45I GTSAC 1 cut(s) 49
TspDTI ATGAA 3 cut(s) 14, 345, 1334
TspGWI ACGGA 2 cut(s) 163, 246
TspRI CASTG 3 cut(s) 782, 897, 1012
Van91I CCANNNNNTGG 2 cut(s) 272, 1309
VpaK11BI GGWCC 1 cut(s) 1170
VspI ATTAAT 1 cut(s) 416
XapI RAATTY 2 cut(s) 352, 709
XcmI CCANNNNNNNNNTGG 1 cut(s) 402
XspI CTAG 2 cut(s) 137, 941
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.