AT1G08030

Sulfotransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0005473
Physical Location & Seq
Reverse (-)
2489409 .. 2493327
3919 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G08030.1

Sequence Viewer

Length: 1503 bp
ATGCAAATGAACTCTGTTTGGAAGCTGTCTCTTGGGTTATTACTTCTTAGCTCAGTTATTGGCTCTTTTGCGGAACTTGATTTTGGCCATTGCGAAACTCTTGTGAAAAAATGGGCTGATTCTTCTTCATCTCGTGAAGAACATGTTAATAAAGACAAACGCTCGCTTAAGGATTTGCTCTTCTTTCTCCACGTTCCGCGAACTGGAGGCAGAACATATTTTCATTGTTTTTTGAGGAAGTTGTATGATAGCTCTGAGGAATGTCCTCGATCTTACGACAAGCTCCACTTCAATCCAAGGAAGGAAAAGTGCAAGTTGTTAGCCACACATGATGATTATAGTTTGATGGCAAAGCTTCCGAGGGAGAGAACTTCGGTGATGACAATAGTTCGGGATCCTATTGCGCGTGTGTTAAGCACTTATGAATTTTCCGTAGAGGTAGCAGCTAGGTTTTTGGTGCATCCCAATTTAACTTCTGCGTCAAGGATGTCTAGCCGCATACGCAAGAGTAATGTAATAAGCACACTAGACATATGGCCATGGAAATACCTAGTTCCATGGATGAGAGAAGACTTGTTTGCTCGGCGAGATGCACGAAAATTGAAGGAGGTAGTGATCATTGAGGACGATAACCCGTATGACATGGAGGAGATGCTTATGCCTTTGCACAAATATCTTGATGCGCCTACTGCTCATGACATCATCCACAATGGAGCGACTTTTCAGATTGCAGGATTGACAAATAACTCCCATTTATCAGAAGCACACGAGGTTCGGCATTGTGTGCAGAAATTCAAAAGCCTTGGTGAGTCTGTTCTCCAAGTTGCCAAGAGGAGGCTAGACAGCATGTTGTATGTTGGACTGACAGAGGAGCACAGGGAATCTGCATCACTTTTTGCCAATGTAGTGGGTTCTCAAGTGCTGTCTCAAGTGGTTCCGTCCAATGCAACTGCGAAAATCAAAGCTCTTAAATCAGAAGCAAGTGTCACAATTTCAGAAACCGGGTCAGATAAGAGTAATATTCAGAATGGTACATCTGAAGTTACATTGAATAAGGCAGAAGCTAAGAGTGGGAATATGACGGTAAAAACCCTTATGGAAGTCTATGAAGGCTGCATCACTCATTTACGAAAGTCCCAAGGAACCAGACGGGTCAACTCTCTGAAGAGAATAACTCCAGCAAATTTTACAAGAGGGACGCGTACAAGAGTTCCTAAAGAGGTCATTCAGCAGATCAAATCGCTTAACAACCTCGATGTGGAGCTCTACAAATATGCAAAAGTAATCTTTGCCAAAGAACATGAATTAGTGTCGAATAAGTTGATCTCAAGTTCTAAGAGAAGCATTGTTGATCTGCCGAGTGAGTTAAAGAGCGTATTGGGAGAAATGGGTGAAGAGAAGCTATGGAAGTTCGTACCAGTGGCATTGATGCTTTTATTGATCGTCCTCTTCTTTCTATTTGTAAACGCTAAAAGGAGAAGAACCTCCAAAGTTAAGATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002376 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0006029 GO:0006521 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008146 GO:0008150 GO:0008152 GO:0008476 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010015 GO:0010033 GO:0010073 GO:0010075 GO:0010082 GO:0010364 GO:0010366 GO:0010468 GO:0010565 GO:0010817 GO:0012505 GO:0015012 GO:0015015 GO:0016740 GO:0016782 GO:0017095 GO:0019222 GO:0019538 GO:0019827 GO:0022622 GO:0030166 GO:0030201 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031335 GO:0031336 GO:0031410 GO:0031982 GO:0031984 GO:0032350 GO:0032351 GO:0032353 GO:0032501 GO:0032502 GO:0033238 GO:0033239 GO:0034483 GO:0034645 GO:0040008 GO:0042221 GO:0042592 GO:0042762 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0045763 GO:0046885 GO:0048364 GO:0048507 GO:0048509 GO:0048519 GO:0048523 GO:0048638 GO:0048731 GO:0048856 GO:0048878 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0050896 GO:0051171 GO:0051172 GO:0051175 GO:0051239 GO:0055065 GO:0055070 GO:0055076 GO:0055080 GO:0060255 GO:0062012 GO:0062014 GO:0065007 GO:0065008 GO:0071704 GO:0080090 GO:0097708 GO:0098727 GO:0098771 GO:0098791 GO:0099402 GO:0140096 GO:1900908 GO:1900909 GO:1900911 GO:1900912 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1905392 GO:2000026 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Sulfotransfer_1 Sulfotransfer_2

Protein Analysis

500

Amino Acids

56.99

Weight (kDa)

9.55

Isoelectric Point (pI)

40.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 3 cut(s) 199, 406, 1201
AciI CCGC 3 cut(s) 71, 197, 496
AclWI GGATC 2 cut(s) 389, 402
AcoI YGGCCR 2 cut(s) 85, 536
AcsI RAATTY 3 cut(s) 425, 791, 1183
AcuI CTGAAG 2 cut(s) 1059, 1184
AfaI GTAC 3 cut(s) 1033, 1204, 1416
AfiI CCNNNNNNNGG 3 cut(s) 203, 834, 1258
AflII CTTAAG 1 cut(s) 167
AflIII ACRYGT 2 cut(s) 142, 1199
AgsI TTSAA 4 cut(s) 292, 604, 796, 1051
AjuI GAANNNNNNNTTGG 2 cut(s) 66, 98
Alw21I GWGCWC 2 cut(s) 876, 1266
Alw26I GTCTC 2 cut(s) 33, 930
AlwI GGATC 2 cut(s) 389, 402
AoxI GGCC 2 cut(s) 85, 536
ApeKI GCWGC 2 cut(s) 443, 1113
ApoI RAATTY 3 cut(s) 425, 791, 1183
AspLEI GCGC 2 cut(s) 406, 685
AsuC2I CCSGG 1 cut(s) 1003
AsuHPI GGTGA 3 cut(s) 388, 818, 1403
BalI TGGCCA 2 cut(s) 87, 538
BamHI GGATCC 1 cut(s) 394
BanII GRGCYC 1 cut(s) 1266
BauI CACGAG 2 cut(s) 132, 767
BbsI GAAGAC 1 cut(s) 576
Bbv12I GWGCWC 2 cut(s) 876, 1266
BbvI GCAGC 2 cut(s) 455, 1100
BccI CCATC 1 cut(s) 340
BclI TGATCA 1 cut(s) 615
BcnI CCSGG 1 cut(s) 1003
BcoDI GTCTC 2 cut(s) 33, 930
BfaI CTAG 5 cut(s) 447, 492, 527, 551, 839
BfrI CTTAAG 1 cut(s) 167
BisI GCNGC 3 cut(s) 444, 496, 1114
BlsI GCNGC 3 cut(s) 445, 497, 1115
Bme1390I CCNGG 1 cut(s) 1003
BmiI GGNNCC 3 cut(s) 396, 936, 1144
BmrFI CCNGG 1 cut(s) 1003
BmsI GCATC 7 cut(s) 469, 580, 642, 670, 896, 1125, 1419
BpiI GAAGAC 1 cut(s) 576
BplI GAGNNNNNCTC 2 cut(s) 1159, 1191
BpmI CTGGAG 2 cut(s) 225, 1161
BpuEI CTTGAG 3 cut(s) 900, 912, 1312
BpuMI CCSGG 1 cut(s) 1003
BsaJI CCNNGG 6 cut(s) 296, 359, 539, 557, 802, 1138
Bsc4I CCNNNNNNNGG 3 cut(s) 203, 834, 1258
Bse1I ACTGG 2 cut(s) 208, 1418
Bse3DI GCAATG 1 cut(s) 88
BseDI CCNNGG 6 cut(s) 296, 359, 539, 557, 802, 1138
BseGI GGATG 4 cut(s) 460, 492, 567, 702
BseLI CCNNNNNNNGG 3 cut(s) 203, 834, 1258
BseMI GCAATG 1 cut(s) 88
BseMII CTCAG 2 cut(s) 66, 246
BseNI ACTGG 2 cut(s) 208, 1418
BseRI GAGGAG 3 cut(s) 662, 847, 884
BseXI GCAGC 2 cut(s) 455, 1100
BsgI GTGCAG 1 cut(s) 806
Bsh1236I CGCG 3 cut(s) 199, 406, 1201
BshFI GGCC 2 cut(s) 87, 538
BsiHKAI GWGCWC 2 cut(s) 876, 1266
BsiSI CCGG 1 cut(s) 1002
BslFI GGGAC 2 cut(s) 1120, 1210
BslI CCNNNNNNNGG 3 cut(s) 203, 834, 1258
BsmAI GTCTC 2 cut(s) 33, 930
BsmFI GGGAC 2 cut(s) 1120, 1210
BsnI GGCC 2 cut(s) 87, 538
Bsp1286I GDGCHC 2 cut(s) 876, 1266
Bsp143I GATC 7 cut(s) 269, 394, 615, 1233, 1323, 1351, 1440
Bsp19I CCATGG 2 cut(s) 539, 557
BspACI CCGC 3 cut(s) 71, 197, 496
BspANI GGCC 2 cut(s) 87, 538
BspCNI CTCAG 2 cut(s) 65, 247
BspFNI CGCG 3 cut(s) 199, 406, 1201
BspHI TCATGA 1 cut(s) 694
BspLI GGNNCC 3 cut(s) 396, 936, 1144
BspPI GGATC 2 cut(s) 389, 402
BspQI GCTCTTC 1 cut(s) 185
BspTI CTTAAG 1 cut(s) 167
BsrDI GCAATG 1 cut(s) 88
BsrI ACTGG 2 cut(s) 208, 1418
BssECI CCNNGG 6 cut(s) 296, 359, 539, 557, 802, 1138
BssMI GATC 7 cut(s) 269, 394, 615, 1233, 1323, 1351, 1440
BssSI CACGAG 2 cut(s) 132, 767
BssT1I CCWWGG 5 cut(s) 296, 539, 557, 802, 1138
Bst2BI CACGAG 2 cut(s) 132, 767
Bst4CI ACNGT 1 cut(s) 1084
Bst6I CTCTTC 4 cut(s) 185, 1160, 1389, 1454
BstAFI CTTAAG 1 cut(s) 167
BstAPI GCANNNNNTGC 1 cut(s) 784
BstC8I GCNNGC 1 cut(s) 164
BstDEI CTNAG 5 cut(s) 47, 52, 255, 1065, 1335
BstDSI CCRYGG 2 cut(s) 539, 557
BstF5I GGATG 4 cut(s) 460, 492, 567, 702
BstFNI CGCG 3 cut(s) 199, 406, 1201
BstHHI GCGC 2 cut(s) 406, 685
BstKTI GATC 7 cut(s) 272, 397, 618, 1236, 1326, 1354, 1443
BstMAI GTCTC 2 cut(s) 33, 930
BstMBI GATC 7 cut(s) 269, 394, 615, 1233, 1323, 1351, 1440
BstMWI GCNNNNNNNGC 3 cut(s) 501, 689, 784
BstNSI RCATGY 2 cut(s) 146, 850
BstSCI CCNGG 1 cut(s) 1001
BstUI CGCG 3 cut(s) 199, 406, 1201
BstV1I GCAGC 2 cut(s) 455, 1100
BstV2I GAAGAC 1 cut(s) 576
BstX2I RGATCY 1 cut(s) 394
BstXI CCANNNNNNTGG 1 cut(s) 907
BstYI RGATCY 1 cut(s) 394
BsuRI GGCC 2 cut(s) 87, 538
BtgI CCRYGG 2 cut(s) 539, 557
BtsCI GGATG 4 cut(s) 460, 492, 567, 702
BtsIMutI CAGTG 1 cut(s) 1425
Cac8I GCNNGC 1 cut(s) 164
CciI TCATGA 1 cut(s) 694
CfoI GCGC 2 cut(s) 406, 685
CseI GACGC 2 cut(s) 468, 1207
Csp6I GTAC 3 cut(s) 1032, 1203, 1415
CviAII CATG 8 cut(s) 143, 329, 540, 558, 643, 695, 847, 1301
CviQI GTAC 3 cut(s) 1032, 1203, 1415
DdeI CTNAG 5 cut(s) 47, 52, 255, 1065, 1335
DpnI GATC 7 cut(s) 271, 396, 617, 1235, 1325, 1353, 1442
DpnII GATC 7 cut(s) 269, 394, 615, 1233, 1323, 1351, 1440
EaeI YGGCCR 2 cut(s) 85, 536
Eam1104I CTCTTC 4 cut(s) 185, 1160, 1389, 1454
EarI CTCTTC 4 cut(s) 185, 1160, 1389, 1454
Ecl136II GAGCTC 1 cut(s) 1264
Eco130I CCWWGG 5 cut(s) 296, 539, 557, 802, 1138
Eco24I GRGCYC 1 cut(s) 1266
Eco53kI GAGCTC 1 cut(s) 1264
Eco57I CTGAAG 2 cut(s) 1059, 1184
EcoICRI GAGCTC 1 cut(s) 1264
EcoT14I CCWWGG 5 cut(s) 296, 539, 557, 802, 1138
EcoT38I GRGCYC 1 cut(s) 1266
ErhI CCWWGG 5 cut(s) 296, 539, 557, 802, 1138
FaeI CATG 8 cut(s) 146, 332, 543, 561, 646, 698, 850, 1304
FalI AAGNNNNNCTT 2 cut(s) 272, 304
FaqI GGGAC 2 cut(s) 1120, 1210
FatI CATG 8 cut(s) 142, 328, 539, 557, 642, 694, 846, 1300
FauNDI CATATG 1 cut(s) 533
FbaI TGATCA 1 cut(s) 615
Fnu4HI GCNGC 3 cut(s) 444, 496, 1114
FokI GGATG 4 cut(s) 447, 499, 574, 689
FriOI GRGCYC 1 cut(s) 1266
Fsp4HI GCNGC 3 cut(s) 444, 496, 1114
FspBI CTAG 5 cut(s) 447, 492, 527, 551, 839
GlaI GCGC 2 cut(s) 405, 684
GluI GCNGC 3 cut(s) 444, 496, 1114
GsuI CTGGAG 2 cut(s) 225, 1161
HaeIII GGCC 2 cut(s) 87, 538
HapII CCGG 1 cut(s) 1002
HgaI GACGC 2 cut(s) 468, 1207
HhaI GCGC 2 cut(s) 406, 685
Hin1II CATG 8 cut(s) 146, 332, 543, 561, 646, 698, 850, 1304
Hin6I GCGC 2 cut(s) 404, 683
HinP1I GCGC 2 cut(s) 404, 683
HincII GTYRAC 1 cut(s) 1156
HindII GTYRAC 1 cut(s) 1156
HindIII AAGCTT 1 cut(s) 353
HinfI GANTC 3 cut(s) 119, 809, 881
HpaII CCGG 1 cut(s) 1002
HphI GGTGA 3 cut(s) 388, 818, 1403
Hpy166II GTNNAC 2 cut(s) 1156, 1465
Hpy188III TCNNGA 4 cut(s) 134, 392, 677, 695
Hpy8I GTNNAC 2 cut(s) 1156, 1465
HpyAV CCTTC 3 cut(s) 295, 598, 1103
HpyCH4III ACNGT 1 cut(s) 1084
HpyCH4IV ACGT 1 cut(s) 192
HpyF10VI GCNNNNNNNGC 3 cut(s) 501, 689, 784
HpyF3I CTNAG 5 cut(s) 47, 52, 255, 1065, 1335
HpySE526I ACGT 1 cut(s) 192
Hsp92II CATG 8 cut(s) 146, 332, 543, 561, 646, 698, 850, 1304
HspAI GCGC 2 cut(s) 404, 683
Ksp22I TGATCA 1 cut(s) 615
Kzo9I GATC 7 cut(s) 269, 394, 615, 1233, 1323, 1351, 1440
LguI GCTCTTC 1 cut(s) 185
LmnI GCTCC 4 cut(s) 288, 713, 871, 1261
LpnPI CCDG 7 cut(s) 189, 717, 862, 1015, 1159, 1191, 1431
Lsp1109I GCAGC 2 cut(s) 455, 1100
LweI GCATC 7 cut(s) 469, 580, 642, 670, 896, 1125, 1419
MaeI CTAG 5 cut(s) 447, 492, 527, 551, 839
MaeII ACGT 1 cut(s) 192
MaeIII GTNAC 2 cut(s) 985, 1042
MalI GATC 7 cut(s) 271, 396, 617, 1235, 1325, 1353, 1442
MboI GATC 7 cut(s) 269, 394, 615, 1233, 1323, 1351, 1440
MboII GAAGA 9 cut(s) 114, 117, 149, 172, 581, 1177, 1406, 1441, 1491
MflI RGATCY 1 cut(s) 394
MhlI GDGCHC 2 cut(s) 876, 1266
MlsI TGGCCA 2 cut(s) 87, 538
MluCI AATT 7 cut(s) 425, 466, 599, 791, 990, 1183, 1304
MluI ACGCGT 1 cut(s) 1199
MluNI TGGCCA 2 cut(s) 87, 538
MlyI GAGTC 1 cut(s) 818
MmeI TCCRAC 1 cut(s) 838
Mox20I TGGCCA 2 cut(s) 87, 538
MscI TGGCCA 2 cut(s) 87, 538
MseI TTAA 8 cut(s) 147, 168, 413, 470, 969, 1245, 1367, 1494
Msp20I TGGCCA 2 cut(s) 87, 538
MspCI CTTAAG 1 cut(s) 167
MspI CCGG 1 cut(s) 1002
MspR9I CCNGG 1 cut(s) 1003
MvnI CGCG 3 cut(s) 199, 406, 1201
MwoI GCNNNNNNNGC 3 cut(s) 501, 689, 784
NciI CCSGG 1 cut(s) 1003
NcoI CCATGG 2 cut(s) 539, 557
NdeI CATATG 1 cut(s) 533
NdeII GATC 7 cut(s) 269, 394, 615, 1233, 1323, 1351, 1440
NlaIII CATG 8 cut(s) 146, 332, 543, 561, 646, 698, 850, 1304
NlaIV GGNNCC 3 cut(s) 396, 936, 1144
NmeAIII GCCGAG 2 cut(s) 562, 1383
NmuCI GTSAC 1 cut(s) 985
NspI RCATGY 2 cut(s) 146, 850
PagI TCATGA 1 cut(s) 694
PciI ACATGT 1 cut(s) 142
PciSI GCTCTTC 1 cut(s) 185
PfeI GAWTC 2 cut(s) 119, 881
PkrI GCNGC 3 cut(s) 445, 497, 1115
PleI GAGTC 1 cut(s) 817
PpsI GAGTC 1 cut(s) 817
PscI ACATGT 1 cut(s) 142
Psp124BI GAGCTC 1 cut(s) 1266
PspN4I GGNNCC 3 cut(s) 396, 936, 1144
PsuI RGATCY 1 cut(s) 394
RsaI GTAC 3 cut(s) 1033, 1204, 1416
RsaNI GTAC 3 cut(s) 1032, 1203, 1415
SacI GAGCTC 1 cut(s) 1266
SapI GCTCTTC 1 cut(s) 185
SaqAI TTAA 8 cut(s) 147, 168, 413, 470, 969, 1245, 1367, 1494
SatI GCNGC 3 cut(s) 444, 496, 1114
Sau3AI GATC 7 cut(s) 269, 394, 615, 1233, 1323, 1351, 1440
SchI GAGTC 1 cut(s) 818
ScrFI CCNGG 1 cut(s) 1003
SduI GDGCHC 2 cut(s) 876, 1266
SfaNI GCATC 7 cut(s) 469, 580, 642, 670, 896, 1125, 1419
SmlI CTYRAG 4 cut(s) 167, 915, 927, 1327
SmoI CTYRAG 4 cut(s) 167, 915, 927, 1327
Sse9I AATT 7 cut(s) 425, 466, 599, 791, 990, 1183, 1304
SsiI CCGC 3 cut(s) 71, 197, 496
SspI AATATT 1 cut(s) 1021
SspMI CTAG 5 cut(s) 447, 492, 527, 551, 839
SstI GAGCTC 1 cut(s) 1266
StyD4I CCNGG 1 cut(s) 1001
StyI CCWWGG 5 cut(s) 296, 539, 557, 802, 1138
TaaI ACNGT 1 cut(s) 1084
TaiI ACGT 1 cut(s) 195
TaqI TCGA 3 cut(s) 268, 1254, 1313
TasI AATT 7 cut(s) 425, 466, 599, 791, 990, 1183, 1304
TauI GCSGC 1 cut(s) 498
TfiI GAWTC 2 cut(s) 119, 881
Tru1I TTAA 8 cut(s) 147, 168, 413, 470, 969, 1245, 1367, 1494
Tru9I TTAA 8 cut(s) 147, 168, 413, 470, 969, 1245, 1367, 1494
TscAI CASTG 1 cut(s) 1425
TseFI GTSAC 1 cut(s) 985
TseI GCWGC 2 cut(s) 443, 1113
Tsp45I GTSAC 1 cut(s) 985
TspDTI ATGAA 6 cut(s) 23, 117, 212, 438, 1122, 1317
TspGWI ACGGA 2 cut(s) 421, 927
TspRI CASTG 1 cut(s) 1425
Vha464I CTTAAG 1 cut(s) 167
XapI RAATTY 3 cut(s) 425, 791, 1183
XceI RCATGY 2 cut(s) 146, 850
XspI CTAG 5 cut(s) 447, 492, 527, 551, 839
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.