Rh5DG410700

Protein-tyrosine sulfotransferase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0005473
Physical Location & Seq
Forward (+)
65194251 .. 65201081
6831 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG410700.1

Sequence Viewer

Length: 1389 bp
ATGGGTTTAGCAGCGGTTGGAGTAGGAAGAGGGTGTATGGATCCTACTCTGAAACTCTCTATCCTGCTGTTGCTACTCGGATTCGCTTATGTATCAGTGAATGCCGCATCTTTTAAGAATGATTATGGGCATTGTGAAAGAGTTGTCAAGGGATGGGCATTCTCTTCGCTTAAACAACAAGTTAAAGAAGATAAGCACACACTGAGGGATTTGCTGTTTTTCCTTCACGTCCCAAGAACAGGGGGGCGCACATATTTTCACTGTTTCTTGAGAAAGTTGTATTATAGCTCTCTGGAATGCCCCCGATCTTATGATAAGCTGCGGTTTGACCCCAGAAAAAAACAGTGCAGGTTGCTGGTTACTCATGATGATTATAGCATGATGTCGAAACTTCCAAGGGAGAGAACTTCAGTAGTGACAATACTTAGGGATCCAGTTGACCGTGTTTTTAGTTCTTATGAATTTTCGGTAGAGGTAGCTGCTAGGTTTTTGGTACATCCCAACTTAACTTCTGCAACACAAATGGCGAGACGTTTGCGGTTGAAGACTAAAGGAGTAAGCACATTGGACATTTGGCCCTGGAAATATTTGGTTCCATGGATGAGGGAAGACCTTTTTGCTCGGAGAGAGGGTCGAAAGCTTAGTGGCACATTTGAAGTTCAGAGCGATGACCCATACAACATGGAGGAAATTGTGATGCCATTACATGAATACATCAATCACCCTATAGCTCAAGATATTGTTCACAATGGTGCAACATTCCAGGTAGCAGGATTGACAAACAACTCCTATCAACCTGATTCACACGAAGTGCGCCATTGTGTGCAGAAGTATAAGCTGCTTGGTGAATATGTTCTTCAAGTTGCAAAGAAGAGGTTGGATGATATGTTATATGTTGGTCTCACTGAGGAGCACAGAGAATCTGCAACAATGTTTGCAAATGTGGTTGGTGCCCAGGTGATTTCACAGCTGAGAGGATCAAATTTTAGTGGGGAGATTAATGCTGCTAACGATAAATCTGAGCAGAGCTACCCAATTTCAGATTCCAAGCCCAGTAATGATGATCTTCAGAGCAGCACTCCAGATGGAAAGGAAAGTGAGATTGCTTCATCTGAAACTGGTGGAGCTGTGAAAGAAAATATGACAGTGGGAGACCTTATGGAAGCTTATGAAGATTGCATTTCTAGTTTACGGGAGGCCCAGACAAGGAGGCGCACCTCATCTTTGAAGAGGATCTCCCCAGCAAACTTTACTAAGGAGGTAGCCCTAAATTCTTTTAATTTTTCTAGACTAGCTACTTCAATTGATGATCTTTTGCAGATTAGTAGTGAGGCTGCAAAGCATTTGTTTCTCTTTTCACCAAAATGTATCCTTTTTGCCATGCACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002376 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0006029 GO:0006521 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008146 GO:0008150 GO:0008152 GO:0008476 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010015 GO:0010033 GO:0010073 GO:0010075 GO:0010082 GO:0010364 GO:0010366 GO:0010468 GO:0010565 GO:0010817 GO:0012505 GO:0015012 GO:0015015 GO:0016740 GO:0016782 GO:0017095 GO:0019222 GO:0019538 GO:0019827 GO:0022622 GO:0030166 GO:0030201 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031335 GO:0031336 GO:0031410 GO:0031982 GO:0031984 GO:0032350 GO:0032351 GO:0032353 GO:0032501 GO:0032502 GO:0033238 GO:0033239 GO:0034483 GO:0034645 GO:0040008 GO:0042221 GO:0042592 GO:0042762 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0045763 GO:0046885 GO:0048364 GO:0048507 GO:0048509 GO:0048519 GO:0048523 GO:0048638 GO:0048731 GO:0048856 GO:0048878 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0050896 GO:0051171 GO:0051172 GO:0051175 GO:0051239 GO:0055065 GO:0055070 GO:0055076 GO:0055080 GO:0060255 GO:0062012 GO:0062014 GO:0065007 GO:0065008 GO:0071704 GO:0080090 GO:0097708 GO:0098727 GO:0098771 GO:0098791 GO:0099402 GO:0140096 GO:1900908 GO:1900909 GO:1900911 GO:1900912 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1905392 GO:2000026 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Sulfotransfer_1 Sulfotransfer_2

Protein Analysis

462

Amino Acids

52.46

Weight (kDa)

8.47

Isoelectric Point (pI)

41.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 339
AccB1I GGYRCC 1 cut(s) 950
AciI CCGC 4 cut(s) 14, 105, 322, 538
AclWI GGATC 6 cut(s) 35, 48, 425, 438, 985, 1241
AcsI RAATTY 3 cut(s) 461, 982, 1270
AcuI CTGAAG 2 cut(s) 393, 1052
AdeI CACNNNGTG 1 cut(s) 811
AfaI GTAC 1 cut(s) 495
AfiI CCNNNNNNNGG 2 cut(s) 239, 1206
AgsI TTSAA 5 cut(s) 544, 656, 860, 1228, 1302
AjiI CACGTC 1 cut(s) 229
AjnI CCWGG 3 cut(s) 578, 762, 954
AjuI GAANNNNNNNTTGG 2 cut(s) 1027, 1059
AleI CACNNNNGTG 1 cut(s) 750
Alw21I GWGCWC 1 cut(s) 915
Alw26I GTCTC 3 cut(s) 523, 905, 1146
AlwI GGATC 6 cut(s) 35, 48, 425, 438, 985, 1241
AoxI GGCC 2 cut(s) 575, 1197
ApeKI GCWGC 7 cut(s) 11, 319, 479, 838, 1004, 1074, 1334
ApoI RAATTY 3 cut(s) 461, 982, 1270
AseI ATTAAT 1 cut(s) 999
Asp700I GAANNNNTTC 1 cut(s) 852
AspLEI GCGC 3 cut(s) 249, 816, 1215
AspS9I GGNCC 2 cut(s) 576, 1198
AsuHPI GGTGA 4 cut(s) 713, 857, 970, 1350
BaeGI GKGCMC 1 cut(s) 955
BamHI GGATCC 2 cut(s) 40, 430
BanI GGYRCC 1 cut(s) 950
BbsI GAAGAC 2 cut(s) 551, 615
Bbv12I GWGCWC 1 cut(s) 915
BbvI GCAGC 7 cut(s) 23, 306, 466, 825, 991, 1086, 1321
BccI CCATC 2 cut(s) 147, 1079
BcgI CGANNNNNNTGC 4 cut(s) 147, 181, 517, 551
BciT130I CCWGG 3 cut(s) 580, 764, 956
BciVI GTATCC 1 cut(s) 1379
BcoDI GTCTC 3 cut(s) 523, 905, 1146
BfaI CTAG 5 cut(s) 483, 1185, 1287, 1292, 1387
BfmI CTRYAG 1 cut(s) 726
BfuAI ACCTGC 1 cut(s) 339
BfuI GTATCC 1 cut(s) 1379
BisI GCNGC 8 cut(s) 12, 105, 320, 480, 839, 1005, 1075, 1335
BlsI GCNGC 8 cut(s) 13, 106, 321, 481, 840, 1006, 1076, 1336
Bme1390I CCNGG 3 cut(s) 580, 764, 956
BmgBI CACGTC 1 cut(s) 229
BmgT120I GGNCC 2 cut(s) 576, 1198
BmiI GGNNCC 4 cut(s) 42, 432, 594, 952
BmrFI CCNGG 3 cut(s) 580, 764, 956
BmrI ACTGGG 1 cut(s) 1047
BmsI GCATC 2 cut(s) 116, 687
BmuI ACTGGG 1 cut(s) 1047
BpiI GAAGAC 2 cut(s) 551, 615
BplI GAGNNNNNCTC 2 cut(s) 1063, 1095
BpmI CTGGAG 1 cut(s) 1065
BpuEI CTTGAG 2 cut(s) 289, 717
BsaI GGTCTC 2 cut(s) 905, 1146
BsaJI CCNNGG 4 cut(s) 395, 578, 596, 954
BsaXI ACNNNNNCTCC 2 cut(s) 616, 646
Bsc4I CCNNNNNNNGG 2 cut(s) 239, 1206
Bse1I ACTGG 3 cut(s) 434, 1053, 1123
BseBI CCWGG 3 cut(s) 580, 764, 956
BseDI CCNNGG 4 cut(s) 395, 578, 596, 954
BseGI GGATG 4 cut(s) 158, 496, 606, 886
BseLI CCNNNNNNNGG 2 cut(s) 239, 1206
BseMII CTCAG 4 cut(s) 194, 897, 962, 1011
BseNI ACTGG 3 cut(s) 434, 1053, 1123
BseRI GAGGAG 1 cut(s) 923
BseSI GKGCMC 1 cut(s) 955
BseXI GCAGC 7 cut(s) 23, 306, 466, 825, 991, 1086, 1321
BseYI CCCAGC 1 cut(s) 1240
BsgI GTGCAG 2 cut(s) 367, 845
BshFI GGCC 2 cut(s) 577, 1199
BshNI GGYRCC 1 cut(s) 950
BsiHKAI GWGCWC 1 cut(s) 915
BslFI GGGAC 1 cut(s) 215
BslI CCNNNNNNNGG 2 cut(s) 239, 1206
BsmAI GTCTC 3 cut(s) 523, 905, 1146
BsmBI CGTCTC 1 cut(s) 523
BsmFI GGGAC 1 cut(s) 215
BsmI GAATGC 3 cut(s) 106, 158, 302
BsnI GGCC 2 cut(s) 577, 1199
Bso31I GGTCTC 2 cut(s) 905, 1146
Bsp1286I GDGCHC 2 cut(s) 915, 955
Bsp143I GATC 7 cut(s) 40, 305, 430, 977, 1063, 1233, 1309
Bsp19I CCATGG 1 cut(s) 596
BspACI CCGC 4 cut(s) 14, 105, 322, 538
BspANI GGCC 2 cut(s) 577, 1199
BspCNI CTCAG 4 cut(s) 195, 898, 963, 1012
BspHI TCATGA 1 cut(s) 364
BspLI GGNNCC 4 cut(s) 42, 432, 594, 952
BspMI ACCTGC 1 cut(s) 339
BspPI GGATC 6 cut(s) 35, 48, 425, 438, 985, 1241
BspT107I GGYRCC 1 cut(s) 950
BspTNI GGTCTC 2 cut(s) 905, 1146
BsrI ACTGG 3 cut(s) 434, 1053, 1123
BssECI CCNNGG 4 cut(s) 395, 578, 596, 954
BssMI GATC 7 cut(s) 40, 305, 430, 977, 1063, 1233, 1309
BssT1I CCWWGG 2 cut(s) 395, 596
Bst2UI CCWGG 3 cut(s) 580, 764, 956
Bst4CI ACNGT 4 cut(s) 263, 345, 443, 1147
Bst6I CTCTTC 4 cut(s) 22, 169, 866, 1223
BstDEI CTNAG 7 cut(s) 203, 425, 641, 906, 971, 1020, 1254
BstDSI CCRYGG 1 cut(s) 596
BstF5I GGATG 4 cut(s) 158, 496, 606, 886
BstHHI GCGC 3 cut(s) 249, 816, 1215
BstKTI GATC 7 cut(s) 43, 308, 433, 980, 1066, 1236, 1312
BstMAI GTCTC 3 cut(s) 523, 905, 1146
BstMBI GATC 7 cut(s) 40, 305, 430, 977, 1063, 1233, 1309
BstNI CCWGG 3 cut(s) 580, 764, 956
BstSCI CCNGG 3 cut(s) 578, 762, 954
BstSFI CTRYAG 1 cut(s) 726
BstSLI GKGCMC 1 cut(s) 955
BstV1I GCAGC 7 cut(s) 23, 306, 466, 825, 991, 1086, 1321
BstV2I GAAGAC 2 cut(s) 551, 615
BstX2I RGATCY 3 cut(s) 40, 430, 1233
BstYI RGATCY 3 cut(s) 40, 430, 1233
BsuI GTATCC 1 cut(s) 1379
BsuRI GGCC 2 cut(s) 577, 1199
BtgI CCRYGG 1 cut(s) 596
BtgZI GCGATG 1 cut(s) 681
BtrI CACGTC 1 cut(s) 229
BtsCI GGATG 4 cut(s) 158, 496, 606, 886
BtsIMutI CAGTG 6 cut(s) 102, 200, 259, 350, 903, 1152
BveI ACCTGC 1 cut(s) 339
CciI TCATGA 1 cut(s) 364
CfoI GCGC 3 cut(s) 249, 816, 1215
Cfr13I GGNCC 2 cut(s) 576, 1198
Csp6I GTAC 1 cut(s) 494
CviAII CATG 6 cut(s) 365, 379, 597, 682, 707, 1381
CviQI GTAC 1 cut(s) 494
DdeI CTNAG 7 cut(s) 203, 425, 641, 906, 971, 1020, 1254
DpnI GATC 7 cut(s) 42, 307, 432, 979, 1065, 1235, 1311
DpnII GATC 7 cut(s) 40, 305, 430, 977, 1063, 1233, 1309
DraIII CACNNNGTG 1 cut(s) 811
Eam1104I CTCTTC 4 cut(s) 22, 169, 866, 1223
EarI CTCTTC 4 cut(s) 22, 169, 866, 1223
Eco130I CCWWGG 2 cut(s) 395, 596
Eco31I GGTCTC 2 cut(s) 905, 1146
Eco57I CTGAAG 2 cut(s) 393, 1052
EcoRII CCWGG 3 cut(s) 578, 762, 954
EcoT14I CCWWGG 2 cut(s) 395, 596
ErhI CCWWGG 2 cut(s) 395, 596
Esp3I CGTCTC 1 cut(s) 523
FaeI CATG 6 cut(s) 368, 382, 600, 685, 710, 1384
FaqI GGGAC 1 cut(s) 215
FatI CATG 6 cut(s) 364, 378, 596, 681, 706, 1380
Fnu4HI GCNGC 8 cut(s) 12, 105, 320, 480, 839, 1005, 1075, 1335
FokI GGATG 4 cut(s) 165, 483, 613, 893
Fsp4HI GCNGC 8 cut(s) 12, 105, 320, 480, 839, 1005, 1075, 1335
FspBI CTAG 5 cut(s) 483, 1185, 1287, 1292, 1387
GlaI GCGC 3 cut(s) 248, 815, 1214
GluI GCNGC 8 cut(s) 12, 105, 320, 480, 839, 1005, 1075, 1335
GsaI CCCAGC 1 cut(s) 1244
GsuI CTGGAG 1 cut(s) 1065
HaeIII GGCC 2 cut(s) 577, 1199
HhaI GCGC 3 cut(s) 249, 816, 1215
Hin1II CATG 6 cut(s) 368, 382, 600, 685, 710, 1384
Hin6I GCGC 3 cut(s) 247, 814, 1213
HinP1I GCGC 3 cut(s) 247, 814, 1213
HincII GTYRAC 1 cut(s) 439
HindII GTYRAC 1 cut(s) 439
HindIII AAGCTT 2 cut(s) 638, 1164
HinfI GANTC 4 cut(s) 81, 800, 920, 1043
HphI GGTGA 4 cut(s) 713, 857, 970, 1350
Hpy166II GTNNAC 3 cut(s) 439, 745, 1190
Hpy188I TCNGA 8 cut(s) 51, 80, 624, 663, 1021, 1042, 1071, 1114
Hpy188III TCNNGA 6 cut(s) 268, 293, 365, 734, 1082, 1287
Hpy8I GTNNAC 3 cut(s) 439, 745, 1190
HpyAV CCTTC 1 cut(s) 233
HpyCH4III ACNGT 4 cut(s) 263, 345, 443, 1147
HpyCH4IV ACGT 2 cut(s) 228, 532
HpyF3I CTNAG 7 cut(s) 203, 425, 641, 906, 971, 1020, 1254
HpySE526I ACGT 2 cut(s) 228, 532
Hsp92II CATG 6 cut(s) 368, 382, 600, 685, 710, 1384
HspAI GCGC 3 cut(s) 247, 814, 1213
Kzo9I GATC 7 cut(s) 40, 305, 430, 977, 1063, 1233, 1309
LmnI GCTCC 2 cut(s) 910, 1124
Lsp1109I GCAGC 7 cut(s) 23, 306, 466, 825, 991, 1086, 1321
LweI GCATC 2 cut(s) 116, 687
MaeI CTAG 5 cut(s) 483, 1185, 1287, 1292, 1387
MaeII ACGT 2 cut(s) 228, 532
MaeIII GTNAC 2 cut(s) 358, 415
MalI GATC 7 cut(s) 42, 307, 432, 979, 1065, 1235, 1311
MboI GATC 7 cut(s) 40, 305, 430, 977, 1063, 1233, 1309
MfeI CAATTG 1 cut(s) 1302
MflI RGATCY 3 cut(s) 40, 430, 1233
MhlI GDGCHC 2 cut(s) 915, 955
MluCI AATT 7 cut(s) 461, 690, 982, 1035, 1270, 1279, 1302
MmeI TCCRAC 1 cut(s) 858
MroXI GAANNNNTTC 1 cut(s) 852
MseI TTAA 6 cut(s) 114, 171, 183, 506, 999, 1278
MslI CAYNNNNRTG 2 cut(s) 750, 1363
MspA1I CMGCKG 2 cut(s) 14, 970
MspR9I CCNGG 3 cut(s) 580, 764, 956
MunI CAATTG 1 cut(s) 1302
Mva1269I GAATGC 3 cut(s) 106, 158, 302
MvaI CCWGG 3 cut(s) 580, 764, 956
NcoI CCATGG 1 cut(s) 596
NdeII GATC 7 cut(s) 40, 305, 430, 977, 1063, 1233, 1309
NlaIII CATG 6 cut(s) 368, 382, 600, 685, 710, 1384
NlaIV GGNNCC 4 cut(s) 42, 432, 594, 952
NmuCI GTSAC 1 cut(s) 415
OliI CACNNNNGTG 1 cut(s) 750
PagI TCATGA 1 cut(s) 364
PctI GAATGC 3 cut(s) 106, 158, 302
PdmI GAANNNNTTC 1 cut(s) 852
PfeI GAWTC 4 cut(s) 81, 800, 920, 1043
PkrI GCNGC 8 cut(s) 13, 106, 321, 481, 840, 1006, 1076, 1336
PshBI ATTAAT 1 cut(s) 999
Psp6I CCWGG 3 cut(s) 578, 762, 954
PspFI CCCAGC 1 cut(s) 1240
PspGI CCWGG 3 cut(s) 578, 762, 954
PspN4I GGNNCC 4 cut(s) 42, 432, 594, 952
PspPI GGNCC 2 cut(s) 576, 1198
PsuI RGATCY 3 cut(s) 40, 430, 1233
PvuII CAGCTG 1 cut(s) 970
RsaI GTAC 1 cut(s) 495
RsaNI GTAC 1 cut(s) 494
RseI CAYNNNNRTG 2 cut(s) 750, 1363
SaqAI TTAA 6 cut(s) 114, 171, 183, 506, 999, 1278
SatI GCNGC 8 cut(s) 12, 105, 320, 480, 839, 1005, 1075, 1335
Sau3AI GATC 7 cut(s) 40, 305, 430, 977, 1063, 1233, 1309
Sau96I GGNCC 2 cut(s) 576, 1198
ScrFI CCNGG 3 cut(s) 580, 764, 956
SduI GDGCHC 2 cut(s) 915, 955
SfaNI GCATC 2 cut(s) 116, 687
SfcI CTRYAG 1 cut(s) 726
SmiMI CAYNNNNRTG 2 cut(s) 750, 1363
SmlI CTYRAG 2 cut(s) 268, 732
SmoI CTYRAG 2 cut(s) 268, 732
Sse9I AATT 7 cut(s) 461, 690, 982, 1035, 1270, 1279, 1302
SsiI CCGC 4 cut(s) 14, 105, 322, 538
SspI AATATT 1 cut(s) 587
SspMI CTAG 5 cut(s) 483, 1185, 1287, 1292, 1387
StyD4I CCNGG 3 cut(s) 578, 762, 954
StyI CCWWGG 2 cut(s) 395, 596
TaaI ACNGT 4 cut(s) 263, 345, 443, 1147
TaiI ACGT 2 cut(s) 231, 535
TaqI TCGA 2 cut(s) 386, 634
TasI AATT 7 cut(s) 461, 690, 982, 1035, 1270, 1279, 1302
TauI GCSGC 1 cut(s) 107
TfiI GAWTC 4 cut(s) 81, 800, 920, 1043
Tru1I TTAA 6 cut(s) 114, 171, 183, 506, 999, 1278
Tru9I TTAA 6 cut(s) 114, 171, 183, 506, 999, 1278
TscAI CASTG 6 cut(s) 102, 207, 266, 350, 910, 1152
TseFI GTSAC 1 cut(s) 415
TseI GCWGC 7 cut(s) 11, 319, 479, 838, 1004, 1074, 1334
Tsp45I GTSAC 1 cut(s) 415
TspDTI ATGAA 4 cut(s) 474, 723, 1098, 1185
TspRI CASTG 6 cut(s) 102, 207, 266, 350, 910, 1152
VspI ATTAAT 1 cut(s) 999
XapI RAATTY 3 cut(s) 461, 982, 1270
XbaI TCTAGA 1 cut(s) 1286
XmnI GAANNNNTTC 1 cut(s) 852
XspI CTAG 5 cut(s) 483, 1185, 1287, 1292, 1387
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.