Rorug05G0317600

Protein-tyrosine sulfotransferase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0005473
Physical Location & Seq
Forward (+)
37777544 .. 37780678
3135 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0317600.1

Sequence Viewer

Length: 516 bp
ATGTCTCGTTCAAATTCTCAACAGATTCCAGAGCAGCGGTGTTCCTTGTTCCATTTAGCGTTCTGCGATTTCCCAATTTGGATGTGGATATCTAAGCCAGAGTATGTAGAATTTGGTCCATCCATTTGTCCACGGTTGTTTGTTTCCGATGCTATTAGGGAGTTTGATATGGCTAGAAAATTGAGACAGTCGTTACCAATCAAACCTATAAAGTATAAACACAGACGTAGCCACATACTGGACTTCAGTTATGTTTTTCCACTCAGTGATAAAGGCCAAAGTAGAGTCTTTGCCTTCTTGTCTGTTTATTATGGAGCTGGGCAACTAGATACAAGATGGTATGGTGAACAATATGCTAGTAGAGGCTGCTGTTGCTGTTCAAGCAGGTGTTTGCATGGACATTTTTGCTATACAAATGAGTATACGGATCTGGCGTCTTTGAAGTTTCTTAGTGTAGAGCGTGGATATCCATATACTGATGATAGTCATGTCTTCCAGAGGGCATTTACACCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002376 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0006029 GO:0006521 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0007275 GO:0008146 GO:0008150 GO:0008152 GO:0008476 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010015 GO:0010033 GO:0010073 GO:0010075 GO:0010082 GO:0010364 GO:0010366 GO:0010468 GO:0010565 GO:0010817 GO:0012505 GO:0015012 GO:0015015 GO:0016740 GO:0016782 GO:0017095 GO:0019222 GO:0019538 GO:0019827 GO:0022622 GO:0030166 GO:0030201 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031335 GO:0031336 GO:0031410 GO:0031982 GO:0031984 GO:0032350 GO:0032351 GO:0032353 GO:0032501 GO:0032502 GO:0033238 GO:0033239 GO:0034483 GO:0034645 GO:0040008 GO:0042221 GO:0042592 GO:0042762 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045087 GO:0045763 GO:0046885 GO:0048364 GO:0048507 GO:0048509 GO:0048519 GO:0048523 GO:0048638 GO:0048731 GO:0048856 GO:0048878 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0050896 GO:0051171 GO:0051172 GO:0051175 GO:0051239 GO:0055065 GO:0055070 GO:0055076 GO:0055080 GO:0060255 GO:0062012 GO:0062014 GO:0065007 GO:0065008 GO:0071704 GO:0080090 GO:0097708 GO:0098727 GO:0098771 GO:0098791 GO:0099402 GO:0140096 GO:1900908 GO:1900909 GO:1900911 GO:1900912 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576 GO:1905392 GO:2000026 GO:2000280
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Sulfotransfer_1 Sulfotransfer_2

Protein Analysis

171

Amino Acids

20.08

Weight (kDa)

8.72

Isoelectric Point (pI)

48.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 375
Acc36I ACCTGC 1 cut(s) 375
AccB7I CCANNNNNTGG 1 cut(s) 238
AccI GTMKAC 1 cut(s) 422
AciI CCGC 1 cut(s) 37
AclWI GGATC 1 cut(s) 435
AcsI RAATTY 2 cut(s) 13, 110
AcuI CTGAAG 1 cut(s) 229
AcyI GRCGYC 1 cut(s) 434
AdeI CACNNNGTG 1 cut(s) 266
AfiI CCNNNNNNNGG 1 cut(s) 238
AgsI TTSAA 3 cut(s) 12, 381, 442
AluBI AGCT 1 cut(s) 317
AluI AGCT 1 cut(s) 317
Alw26I GTCTC 2 cut(s) 9, 178
AlwI GGATC 1 cut(s) 435
AoxI GGCC 1 cut(s) 274
ApeKI GCWGC 2 cut(s) 34, 366
ApoI RAATTY 2 cut(s) 13, 110
AspS9I GGNCC 1 cut(s) 116
AsuHPI GGTGA 1 cut(s) 356
AvaII GGWCC 1 cut(s) 116
BbsI GAAGAC 1 cut(s) 484
BbvI GCAGC 2 cut(s) 46, 353
BccI CCATC 2 cut(s) 127, 330
BcoDI GTCTC 2 cut(s) 9, 178
BfaI CTAG 3 cut(s) 174, 326, 357
BfuAI ACCTGC 1 cut(s) 375
BisI GCNGC 2 cut(s) 35, 367
BlsI GCNGC 2 cut(s) 36, 368
Bme18I GGWCC 1 cut(s) 116
BmgT120I GGNCC 1 cut(s) 116
BmsI GCATC 1 cut(s) 139
BpiI GAAGAC 1 cut(s) 484
BsaHI GRCGYC 1 cut(s) 434
BsaJI CCNNGG 1 cut(s) 131
Bsc4I CCNNNNNNNGG 1 cut(s) 238
Bse1I ACTGG 1 cut(s) 243
BseDI CCNNGG 1 cut(s) 131
BseGI GGATG 2 cut(s) 87, 119
BseLI CCNNNNNNNGG 1 cut(s) 238
BseMII CTCAG 1 cut(s) 277
BseNI ACTGG 1 cut(s) 243
BseXI GCAGC 2 cut(s) 46, 353
BseYI CCCAGC 1 cut(s) 317
BshFI GGCC 1 cut(s) 276
BslI CCNNNNNNNGG 1 cut(s) 238
BsmAI GTCTC 2 cut(s) 9, 178
BsnI GGCC 1 cut(s) 276
Bsp143I GATC 1 cut(s) 427
BspACI CCGC 1 cut(s) 37
BspANI GGCC 1 cut(s) 276
BspCNI CTCAG 1 cut(s) 276
BspMI ACCTGC 1 cut(s) 375
BspPI GGATC 1 cut(s) 435
BsrI ACTGG 1 cut(s) 243
BssECI CCNNGG 1 cut(s) 131
BssMI GATC 1 cut(s) 427
BssNAI GTATAC 1 cut(s) 423
BssNI GRCGYC 1 cut(s) 434
Bst1107I GTATAC 1 cut(s) 423
Bst4CI ACNGT 2 cut(s) 135, 189
BstACI GRCGYC 1 cut(s) 434
BstDEI CTNAG 3 cut(s) 93, 263, 449
BstDSI CCRYGG 1 cut(s) 131
BstF5I GGATG 2 cut(s) 87, 119
BstKTI GATC 1 cut(s) 430
BstMAI GTCTC 2 cut(s) 9, 178
BstMBI GATC 1 cut(s) 427
BstMWI GCNNNNNNNGC 2 cut(s) 372, 381
BstV1I GCAGC 2 cut(s) 46, 353
BstV2I GAAGAC 1 cut(s) 484
BstX2I RGATCY 1 cut(s) 427
BstYI RGATCY 1 cut(s) 427
BstZ17I GTATAC 1 cut(s) 423
BsuRI GGCC 1 cut(s) 276
BtgI CCRYGG 1 cut(s) 131
BtsCI GGATG 2 cut(s) 87, 119
BtsIMutI CAGTG 1 cut(s) 271
BveI ACCTGC 1 cut(s) 375
Cfr13I GGNCC 1 cut(s) 116
CseI GACGC 1 cut(s) 423
CviAII CATG 2 cut(s) 395, 488
CviJI RGCY 6 cut(s) 97, 173, 231, 276, 317, 366
CviKI_1 RGCY 6 cut(s) 97, 173, 231, 276, 317, 366
DdeI CTNAG 3 cut(s) 93, 263, 449
DpnI GATC 1 cut(s) 429
DpnII GATC 1 cut(s) 427
DraIII CACNNNGTG 1 cut(s) 266
Eco32I GATATC 2 cut(s) 90, 467
Eco47I GGWCC 1 cut(s) 116
Eco57I CTGAAG 1 cut(s) 229
EcoRV GATATC 2 cut(s) 90, 467
FaeI CATG 2 cut(s) 398, 491
FatI CATG 2 cut(s) 394, 487
FblI GTMKAC 1 cut(s) 422
Fnu4HI GCNGC 2 cut(s) 35, 367
FokI GGATG 2 cut(s) 94, 106
Fsp4HI GCNGC 2 cut(s) 35, 367
FspBI CTAG 3 cut(s) 174, 326, 357
GluI GCNGC 2 cut(s) 35, 367
GsaI CCCAGC 1 cut(s) 321
HaeIII GGCC 1 cut(s) 276
HgaI GACGC 1 cut(s) 423
Hin1I GRCGYC 1 cut(s) 434
Hin1II CATG 2 cut(s) 398, 491
HinfI GANTC 2 cut(s) 25, 285
HphI GGTGA 1 cut(s) 356
Hpy166II GTNNAC 3 cut(s) 131, 347, 423
Hpy188I TCNGA 1 cut(s) 148
Hpy188III TCNNGA 2 cut(s) 29, 496
Hpy8I GTNNAC 3 cut(s) 131, 347, 423
HpyAV CCTTC 1 cut(s) 304
HpyCH4III ACNGT 2 cut(s) 135, 189
HpyCH4IV ACGT 1 cut(s) 226
HpyCH4V TGCA 1 cut(s) 394
HpyF10VI GCNNNNNNNGC 2 cut(s) 372, 381
HpyF3I CTNAG 3 cut(s) 93, 263, 449
HpySE526I ACGT 1 cut(s) 226
Hsp92I GRCGYC 1 cut(s) 434
Hsp92II CATG 2 cut(s) 398, 491
Kzo9I GATC 1 cut(s) 427
LmnI GCTCC 1 cut(s) 314
LpnPI CCDG 7 cut(s) 42, 111, 224, 303, 370, 416, 509
Lsp1109I GCAGC 2 cut(s) 46, 353
LweI GCATC 1 cut(s) 139
MaeI CTAG 3 cut(s) 174, 326, 357
MaeII ACGT 1 cut(s) 226
MaeIII GTNAC 1 cut(s) 192
MalI GATC 1 cut(s) 429
MboI GATC 1 cut(s) 427
MboII GAAGA 1 cut(s) 484
MflI RGATCY 1 cut(s) 427
MluCI AATT 4 cut(s) 13, 75, 110, 179
MlyI GAGTC 1 cut(s) 294
MnlI CCTC 2 cut(s) 356, 492
MseI TTAA 1 cut(s) 514
MspA1I CMGCKG 1 cut(s) 37
MwoI GCNNNNNNNGC 2 cut(s) 372, 381
NdeII GATC 1 cut(s) 427
NlaIII CATG 2 cut(s) 398, 491
PaqCI CACCTGC 1 cut(s) 375
PcsI WCGNNNNNNNCGW 1 cut(s) 431
PfeI GAWTC 1 cut(s) 25
PflMI CCANNNNNTGG 1 cut(s) 238
PkrI GCNGC 2 cut(s) 36, 368
PleI GAGTC 1 cut(s) 293
PpsI GAGTC 1 cut(s) 293
PspFI CCCAGC 1 cut(s) 317
PspPI GGNCC 1 cut(s) 116
PsuI RGATCY 1 cut(s) 427
SaqAI TTAA 1 cut(s) 514
SatI GCNGC 2 cut(s) 35, 367
Sau3AI GATC 1 cut(s) 427
Sau96I GGNCC 1 cut(s) 116
SchI GAGTC 1 cut(s) 294
SetI ASST 5 cut(s) 208, 229, 319, 389, 514
SfaNI GCATC 1 cut(s) 139
SinI GGWCC 1 cut(s) 116
Sse9I AATT 4 cut(s) 13, 75, 110, 179
SsiI CCGC 1 cut(s) 37
SspMI CTAG 3 cut(s) 174, 326, 357
TaaI ACNGT 2 cut(s) 135, 189
TaiI ACGT 1 cut(s) 229
TasI AATT 4 cut(s) 13, 75, 110, 179
TfiI GAWTC 1 cut(s) 25
Tru1I TTAA 1 cut(s) 514
Tru9I TTAA 1 cut(s) 514
TscAI CASTG 1 cut(s) 271
TseI GCWGC 2 cut(s) 34, 366
TspGWI ACGGA 1 cut(s) 440
TspRI CASTG 1 cut(s) 271
Van91I CCANNNNNTGG 1 cut(s) 238
VpaK11BI GGWCC 1 cut(s) 116
XapI RAATTY 2 cut(s) 13, 110
XcmI CCANNNNNNNNNTGG 1 cut(s) 81
XmiI GTMKAC 1 cut(s) 422
XspI CTAG 3 cut(s) 174, 326, 357
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.