Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0011267

Physical Location & Seq

Genomic Coordinates Reverse (-)

4303280 .. 4305907

Gene Structure 2628 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G12640.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1389 bp

ATGGATATGAGTTCAATGGCTGGTTCAATCGGAGTTTCGGTAGCCGTACTCCGATTCCTCCTCTGTTTCGTTGCCACGATCCCTGTTTCATTCGCTTGTCGAATCGTCCCGAGTAGACTCGGTAAACACTTGTATGCCGCTGCTTCAGGTGCTTTCCTCTCTTACCTCTCCTTTGGCTTCTCCTCCAACCTTCACTTCCTTGTTCCGATGACGATCGGATATGCTTCAATGGCGATTTATAGACCCAAGTGTGGAATCATCACTTTCTTCCTCGGTTTCGCTTATCTTATTGGCTGTCATGTGTTTTATATGAGTGGTGATGCGTGGAAAGAAGGAGGAATCGATTCTACTGGAGCGTTAATGGTGTTGACGCTGAAAGTCATCTCATGTTCAATGAATTACAATGATGGGATGTTGAAGGAGGAAGGTCTACGTGAAGCTCAGAAGAAAAACAGATTGATTCAGATGCCGTCTTTGATTGAGTACTTTGGTTACTGCCTTTGTTGTGGTAGCCATTTTGCTGGTCCTGTTTATGAAATGAAAGATTATCTTGAATGGACCGAAGGGAAAGGGATTTGGGATACTACTGAGAAAAGAAAGAAGCCATCGCCTTATGGAGCTACAATCCGAGCTATTTTGCAAGCTGCGATTTGCATGGCTCTGTATCTCTATTTAGTGCCTCAATATCCGTTAACTCGGTTCACAGAACCAGTGTATCAAGAATGGGGATTCTTGAGAAAATTTAGTTACCAATACATGGCTGGATTCACGGCTCGTTGGAAGTATTACTTCATCTGGTCAATTTCAGAGGCTTCTATTATCATCTCTGGTTTGGGTTTCAGTGGTTGGACTGATGATGCTTCACCAAAGCCCAAATGGGACCGTGCCAAGAACGTAGATATTCTCGGTGTTGAACTAGCTAAGAGCGCGGTTCAGATTCCACTTGTGTGGAACATACAAGTCAGCACGTGGCTCCGTCACTATGTGTATGAGAGACTTGTGCAGAACGGAAAGAAAGCGGGTTTCTTCCAGTTACTAGCTACACAAACCGTCAGCGCGGTTTGGCATGGACTGTATCCTGGATATATGATGTTCTTTGTTCAGTCAGCTTTGATGATCGCAGGCTCACGGGTTATTTACCGGTGGCAACAAGCGATCAGTCCGAAAATGGCAATGCTGAGAAATATAATGGTCTTCATCAACTTCCTTTACACTGTTTTGGTTCTCAACTACTCAGCCGTCGGTTTCATGGTGTTAAGCTTGCACGAAACACTTACCGCCTACGGAAGCGTATATTACATTGGAACAATCATACCTGTTGGATTGATTCTCCTCAGTTACGTTGTGCCTGCAAAACCTTCAAGACCAAAACCGCGTAAAGAAGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005886 GO:0006629 GO:0006643 GO:0006644 GO:0006664 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009247 GO:0009987 GO:0012505 GO:0016020 GO:0016740 GO:0016746 GO:0016747 GO:0019374 GO:0019375 GO:0019637 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0045017 GO:0046467 GO:0046486 GO:0071617 GO:0071704 GO:0071944 GO:0090407 GO:1901135 GO:1901137 GO:1901576 GO:1903509

KEGG Pathways

Metabolic & Signaling

ko00561 ko00564 ko00565 ko01100 ko01110 map00561 map00564 map00565 map01100 map01110

Pfam Domains

Protein Families

MBOAT

Protein Analysis

462

Amino Acids

52.15

Weight (kDa)

9.29

Isoelectric Point (pI)

42.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MBOAT	PF03062	102 - 413	9e-74	MBOAT, membrane-bound O-acyltransferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011267)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12640 AT1G63050
fragaria_vesca	FvH4_5g01510 FvH4_5g01510
malus_domestica	MD04G1067300.v1.1 MD06G1073000.v1.1
prunus_persica	Prupe.5G091400_v2.0.a1 Prupe.5G091400_v2.0.a1 Prupe.5G091400_v2.0.a1 Prupe.5G091400_v2.0.a1
pyrus_communis	pycom04g06040 pycom06g07240
rosa_chinensis	RchiOBHm_Chr7g0199181
rosa_laevigata	RLG00000003808
rosa_multiflora	Rmu_co8406081.1_g000001 Rmu_sc0006266.1_g000067
rosa_roxburghii	Rroxscaffold_3G00256980
rosa_rugosa	Rorug07G0053100
rosa_samantha	Rh7BG180400
rosa_wichuraiana	Rw7G015560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	757
AccI	GTMKAC	2 cut(s)	115, 430
AccII	CGCG	3 cut(s)	929, 1058, 1375
AciI	CCGC	6 cut(s)	138, 929, 1019, 1058, 1278, 1373
AclWI	GGATC	1 cut(s)	73
AcsI	RAATTY	1 cut(s)	740
AcuI	CTGAAG	1 cut(s)	129
AcvI	CACGTG	1 cut(s)	969
AdeI	CACNNNGTG	1 cut(s)	985
AfaI	GTAC	2 cut(s)	48, 485
AfiI	CCNNNNNNNGG	2 cut(s)	251, 757
AgeI	ACCGGT	1 cut(s)	1140
AgsI	TTSAA	8 cut(s)	15, 27, 228, 393, 418, 554, 914, 1362
AjnI	CCWGG	1 cut(s)	1078
AjuI	GAANNNNNNNTTGG	2 cut(s)	179, 211
AleI	CACNNNNGTG	1 cut(s)	946
AluBI	AGCT	8 cut(s)	440, 620, 632, 644, 920, 1040, 1109, 1260
AluI	AGCT	8 cut(s)	440, 620, 632, 644, 920, 1040, 1109, 1260
Alw26I	GTCTC	1 cut(s)	988
AlwI	GGATC	1 cut(s)	73
Ama87I	CYCGRG	1 cut(s)	109
ApeKI	GCWGC	2 cut(s)	140, 644
ApoI	RAATTY	1 cut(s)	740
AsiGI	ACCGGT	1 cut(s)	1140
Asp700I	GAANNNNTTC	1 cut(s)	343
AspLEI	GCGC	2 cut(s)	929, 1058
AspS9I	GGNCC	3 cut(s)	524, 558, 880
AsuHPI	GGTGA	2 cut(s)	329, 855
AvaI	CYCGRG	1 cut(s)	109
AvaII	GGWCC	3 cut(s)	524, 558, 880
BaeI	ACNNNNGTAYC	2 cut(s)	698, 731
BbrPI	CACGTG	1 cut(s)	969
BbsI	GAAGAC	1 cut(s)	1186
BbvI	GCAGC	2 cut(s)	127, 631
BccI	CCATC	2 cut(s)	401, 613
BceAI	ACGGC	4 cut(s)	29, 454, 786, 1223
BciT130I	CCWGG	1 cut(s)	1080
BciVI	GTATCC	2 cut(s)	574, 1086
BcoDI	GTCTC	1 cut(s)	988
BfaI	CTAG	2 cut(s)	917, 1037
BfuI	GTATCC	2 cut(s)	574, 1086
BisI	GCNGC	3 cut(s)	138, 141, 645
BlsI	GCNGC	3 cut(s)	139, 142, 646
BmcAI	AGTACT	1 cut(s)	485
Bme1390I	CCNGG	1 cut(s)	1080
Bme18I	GGWCC	3 cut(s)	524, 558, 880
BmeT110I	CYCGRG	1 cut(s)	109
BmgT120I	GGNCC	3 cut(s)	524, 558, 880
BmiI	GGNNCC	2 cut(s)	881, 974
BmrFI	CCNGG	1 cut(s)	1080
BmsI	GCATC	3 cut(s)	310, 456, 847
BpiI	GAAGAC	1 cut(s)	1186
BpmI	CTGGAG	1 cut(s)	372
BpuEI	CTTGAG	1 cut(s)	754
Bsa29I	ATCGAT	1 cut(s)	342
BsaAI	YACGTR	2 cut(s)	434, 969
BsaBI	GATNNNNATC	1 cut(s)	212
BsaJI	CCNNGG	1 cut(s)	271
BsaWI	WCCGGW	1 cut(s)	1140
BsaXI	ACNNNNNCTCC	2 cut(s)	24, 54
Bsc4I	CCNNNNNNNGG	2 cut(s)	251, 757
Bse118I	RCCGGY	1 cut(s)	1140
Bse1I	ACTGG	3 cut(s)	355, 710, 1030
Bse3DI	GCAATG	1 cut(s)	1179
Bse8I	GATNNNNATC	1 cut(s)	212
BseBI	CCWGG	1 cut(s)	1080
BseCI	ATCGAT	1 cut(s)	342
BseDI	CCNNGG	1 cut(s)	271
BseGI	GGATG	1 cut(s)	417
BseJI	GATNNNNATC	1 cut(s)	212
BseLI	CCNNNNNNNGG	2 cut(s)	251, 757
BseMI	GCAATG	1 cut(s)	1179
BseMII	CTCAG	5 cut(s)	455, 579, 1169, 1248, 1348
BseNI	ACTGG	3 cut(s)	355, 710, 1030
BseRI	GAGGAG	3 cut(s)	50, 172, 1322
BseXI	GCAGC	2 cut(s)	127, 631
BsgI	GTGCAG	1 cut(s)	1022
Bsh1236I	CGCG	3 cut(s)	929, 1058, 1375
Bsh1285I	CGRYCG	1 cut(s)	216
BshTI	ACCGGT	1 cut(s)	1140
BshVI	ATCGAT	1 cut(s)	342
BsiEI	CGRYCG	1 cut(s)	216
BsiHKCI	CYCGRG	1 cut(s)	109
BsiSI	CCGG	1 cut(s)	1141
BslFI	GGGAC	2 cut(s)	92, 893
BslI	CCNNNNNNNGG	2 cut(s)	251, 757
BsmAI	GTCTC	1 cut(s)	988
BsmFI	GGGAC	2 cut(s)	92, 893
BsoBI	CYCGRG	1 cut(s)	109
Bsp143I	GATC	4 cut(s)	78, 213, 1116, 1155
BspACI	CCGC	6 cut(s)	138, 929, 1019, 1058, 1278, 1373
BspCNI	CTCAG	5 cut(s)	454, 580, 1170, 1247, 1347
BspDI	ATCGAT	1 cut(s)	342
BspFNI	CGCG	3 cut(s)	929, 1058, 1375
BspLI	GGNNCC	2 cut(s)	881, 974
BspPI	GGATC	1 cut(s)	73
BsrDI	GCAATG	1 cut(s)	1179
BsrFI	RCCGGY	1 cut(s)	1140
BsrI	ACTGG	3 cut(s)	355, 710, 1030
BssAI	RCCGGY	1 cut(s)	1140
BssECI	CCNNGG	1 cut(s)	271
BssMI	GATC	4 cut(s)	78, 213, 1116, 1155
Bst2UI	CCWGG	1 cut(s)	1080
Bst4CI	ACNGT	4 cut(s)	884, 1051, 1074, 1216
BstBAI	YACGTR	2 cut(s)	434, 969
BstC8I	GCNNGC	4 cut(s)	642, 1123, 1262, 1350
BstDEI	CTNAG	6 cut(s)	441, 588, 921, 1178, 1234, 1334
BstF5I	GGATG	1 cut(s)	417
BstFNI	CGCG	3 cut(s)	929, 1058, 1375
BstHHI	GCGC	2 cut(s)	929, 1058
BstKTI	GATC	4 cut(s)	81, 216, 1119, 1158
BstMAI	GTCTC	1 cut(s)	988
BstMBI	GATC	4 cut(s)	78, 213, 1116, 1155
BstMCI	CGRYCG	1 cut(s)	216
BstMWI	GCNNNNNNNGC	3 cut(s)	149, 230, 926
BstNI	CCWGG	1 cut(s)	1080
BstSCI	CCNGG	1 cut(s)	1078
BstUI	CGCG	3 cut(s)	929, 1058, 1375
BstV1I	GCAGC	2 cut(s)	127, 631
BstV2I	GAAGAC	1 cut(s)	1186
BstXI	CCANNNNNNTGG	2 cut(s)	521, 948
Bsu15I	ATCGAT	1 cut(s)	342
BsuI	GTATCC	2 cut(s)	574, 1086
BsuTUI	ATCGAT	1 cut(s)	342
BtgZI	GCGATG	1 cut(s)	591
BtsCI	GGATG	1 cut(s)	417
BtsIMutI	CAGTG	3 cut(s)	717, 847, 1212
Cac8I	GCNNGC	4 cut(s)	642, 1123, 1262, 1350
CfoI	GCGC	2 cut(s)	929, 1058
Cfr10I	RCCGGY	1 cut(s)	1140
Cfr13I	GGNCC	3 cut(s)	524, 558, 880
ClaI	ATCGAT	1 cut(s)	342
CseI	GACGC	1 cut(s)	379
Csp6I	GTAC	2 cut(s)	47, 484
CspAI	ACCGGT	1 cut(s)	1140
CviAII	CATG	6 cut(s)	299, 387, 655, 757, 1067, 1249
CviQI	GTAC	2 cut(s)	47, 484
DdeI	CTNAG	6 cut(s)	441, 588, 921, 1178, 1234, 1334
DpnI	GATC	4 cut(s)	80, 215, 1118, 1157
DpnII	GATC	4 cut(s)	78, 213, 1116, 1155
DraIII	CACNNNGTG	1 cut(s)	985
Eco47I	GGWCC	3 cut(s)	524, 558, 880
Eco57I	CTGAAG	1 cut(s)	129
Eco72I	CACGTG	1 cut(s)	969
Eco88I	CYCGRG	1 cut(s)	109
EcoRII	CCWGG	1 cut(s)	1078
FaeI	CATG	6 cut(s)	302, 390, 658, 760, 1070, 1252
FalI	AAGNNNNNCTT	4 cut(s)	534, 566, 773, 805
FaqI	GGGAC	2 cut(s)	92, 893
FatI	CATG	6 cut(s)	298, 386, 654, 756, 1066, 1248
FauI	CCCGC	1 cut(s)	1012
FblI	GTMKAC	2 cut(s)	115, 430
Fnu4HI	GCNGC	3 cut(s)	138, 141, 645
FokI	GGATG	1 cut(s)	424
Fsp4HI	GCNGC	3 cut(s)	138, 141, 645
FspBI	CTAG	2 cut(s)	917, 1037
GlaI	GCGC	2 cut(s)	928, 1057
GluI	GCNGC	3 cut(s)	138, 141, 645
GsuI	CTGGAG	1 cut(s)	372
HapII	CCGG	1 cut(s)	1141
HgaI	GACGC	1 cut(s)	379
HhaI	GCGC	2 cut(s)	929, 1058
Hin1II	CATG	6 cut(s)	302, 390, 658, 760, 1070, 1252
Hin6I	GCGC	2 cut(s)	927, 1056
HinP1I	GCGC	2 cut(s)	927, 1056
HincII	GTYRAC	2 cut(s)	369, 693
HindII	GTYRAC	2 cut(s)	369, 693
HindIII	AAGCTT	1 cut(s)	1258
HpaI	GTTAAC	1 cut(s)	693
HpaII	CCGG	1 cut(s)	1141
HphI	GGTGA	2 cut(s)	329, 855
Hpy166II	GTNNAC	6 cut(s)	116, 125, 369, 431, 693, 702
Hpy188III	TCNNGA	5 cut(s)	109, 551, 719, 733, 1362
Hpy8I	GTNNAC	6 cut(s)	116, 125, 369, 431, 693, 702
Hpy99I	CGWCG	1 cut(s)	1244
HpyAV	CCTTC	6 cut(s)	200, 326, 412, 419, 557, 1368
HpyCH4III	ACNGT	4 cut(s)	884, 1051, 1074, 1216
HpyCH4IV	ACGT	4 cut(s)	433, 894, 968, 1341
HpyCH4V	TGCA	5 cut(s)	640, 654, 1003, 1264, 1352
HpyF10VI	GCNNNNNNNGC	3 cut(s)	149, 230, 926
HpyF3I	CTNAG	6 cut(s)	441, 588, 921, 1178, 1234, 1334
HpySE526I	ACGT	4 cut(s)	433, 894, 968, 1341
Hsp92II	CATG	6 cut(s)	302, 390, 658, 760, 1070, 1252
HspAI	GCGC	2 cut(s)	927, 1056
KspAI	GTTAAC	1 cut(s)	693
Kzo9I	GATC	4 cut(s)	78, 213, 1116, 1155
LmnI	GCTCC	3 cut(s)	353, 617, 978
Lsp1109I	GCAGC	2 cut(s)	127, 631
LweI	GCATC	3 cut(s)	310, 456, 847
MaeI	CTAG	2 cut(s)	917, 1037
MaeII	ACGT	4 cut(s)	433, 894, 968, 1341
MaeIII	GTNAC	5 cut(s)	491, 746, 977, 1032, 1337
MalI	GATC	4 cut(s)	80, 215, 1118, 1157
MboI	GATC	4 cut(s)	78, 213, 1116, 1155
MboII	GAAGA	4 cut(s)	259, 457, 1018, 1186
MluCI	AATT	3 cut(s)	397, 740, 801
MlyI	GAGTC	1 cut(s)	111
MmeI	TCCRAC	4 cut(s)	210, 758, 827, 1300
MroXI	GAANNNNTTC	1 cut(s)	343
MseI	TTAA	3 cut(s)	359, 692, 1256
MslI	CAYNNNNRTG	2 cut(s)	132, 946
MspA1I	CMGCKG	1 cut(s)	140
MspI	CCGG	1 cut(s)	1141
MspR9I	CCNGG	1 cut(s)	1080
MvaI	CCWGG	1 cut(s)	1080
MvnI	CGCG	3 cut(s)	929, 1058, 1375
MwoI	GCNNNNNNNGC	3 cut(s)	149, 230, 926
NdeII	GATC	4 cut(s)	78, 213, 1116, 1155
NlaIII	CATG	6 cut(s)	302, 390, 658, 760, 1070, 1252
NlaIV	GGNNCC	2 cut(s)	881, 974
NmuCI	GTSAC	1 cut(s)	977
OliI	CACNNNNGTG	1 cut(s)	946
PdmI	GAANNNNTTC	1 cut(s)	343
PflMI	CCANNNNNTGG	1 cut(s)	757
PfoI	TCCNGGA	1 cut(s)	1078
PinAI	ACCGGT	1 cut(s)	1140
PkrI	GCNGC	3 cut(s)	139, 142, 646
Ple19I	CGATCG	1 cut(s)	216
PleI	GAGTC	1 cut(s)	111
PmaCI	CACGTG	1 cut(s)	969
PmlI	CACGTG	1 cut(s)	969
PpsI	GAGTC	1 cut(s)	111
Ppu21I	YACGTR	2 cut(s)	434, 969
Psp6I	CCWGG	1 cut(s)	1078
PspCI	CACGTG	1 cut(s)	969
PspGI	CCWGG	1 cut(s)	1078
PspN4I	GGNNCC	2 cut(s)	881, 974
PspPI	GGNCC	3 cut(s)	524, 558, 880
PvuI	CGATCG	1 cut(s)	216
RsaI	GTAC	2 cut(s)	48, 485
RsaNI	GTAC	2 cut(s)	47, 484
RseI	CAYNNNNRTG	2 cut(s)	132, 946
SaqAI	TTAA	3 cut(s)	359, 692, 1256
SatI	GCNGC	3 cut(s)	138, 141, 645
Sau3AI	GATC	4 cut(s)	78, 213, 1116, 1155
Sau96I	GGNCC	3 cut(s)	524, 558, 880
ScaI	AGTACT	1 cut(s)	485
SchI	GAGTC	1 cut(s)	111
ScrFI	CCNGG	1 cut(s)	1080
SfaNI	GCATC	3 cut(s)	310, 456, 847
SinI	GGWCC	3 cut(s)	524, 558, 880
SmiMI	CAYNNNNRTG	2 cut(s)	132, 946
SmlI	CTYRAG	1 cut(s)	733
SmoI	CTYRAG	1 cut(s)	733
Sse9I	AATT	3 cut(s)	397, 740, 801
SsiI	CCGC	6 cut(s)	138, 929, 1019, 1058, 1278, 1373
SspMI	CTAG	2 cut(s)	917, 1037
StyD4I	CCNGG	1 cut(s)	1078
TaaI	ACNGT	4 cut(s)	884, 1051, 1074, 1216
TaiI	ACGT	4 cut(s)	436, 897, 971, 1344
TaqI	TCGA	2 cut(s)	100, 342
TaqII	GACCGA	1 cut(s)	575
TasI	AATT	3 cut(s)	397, 740, 801
TatI	WGTACW	1 cut(s)	483
TauI	GCSGC	1 cut(s)	140
Tru1I	TTAA	3 cut(s)	359, 692, 1256
Tru9I	TTAA	3 cut(s)	359, 692, 1256
TscAI	CASTG	3 cut(s)	717, 847, 1219
TseFI	GTSAC	1 cut(s)	977
TseI	GCWGC	2 cut(s)	140, 644
Tsp45I	GTSAC	1 cut(s)	977
TspDTI	ATGAA	7 cut(s)	78, 410, 549, 554, 781, 1186, 1237
TspGWI	ACGGA	4 cut(s)	678, 965, 1023, 1299
TspRI	CASTG	3 cut(s)	717, 847, 1219
Van91I	CCANNNNNTGG	1 cut(s)	757
VpaK11BI	GGWCC	3 cut(s)	524, 558, 880
XapI	RAATTY	1 cut(s)	740
XcmI	CCANNNNNNNNNTGG	2 cut(s)	758, 873
XmiI	GTMKAC	2 cut(s)	115, 430
XmnI	GAANNNNTTC	1 cut(s)	343
XspI	CTAG	2 cut(s)	917, 1037
ZrmI	AGTACT	1 cut(s)	485

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.