AT1G27620

Transferase family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
9608153 .. 9610566
2414 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G27620.1

Sequence Viewer

Length: 1329 bp
ATGCAAGAACTGCCGGATTGTTTGTACGAGGAAAACCAACCAACCTTAATAACTCCTTTATCTCCCACACCAAATCACTCTCTCTACCTTTCAAACCTCGACGACCATCATTTTCTCAGATTCTCTATCAAGTACCTTTACCTTTTCCAAAAATCTATATCCCCTCTCACCCTGAAAGATTCGCTCTCTAGGGTTCTAGTTGATTACTACCCTTTCGCGGGTCGGATAAGAGTCTCCGATGAAGGGAGCAAGCTCGAGGTAGACTGTAATGGAGAAGGCGCAGTTTTCGCAGAAGCTTTCATGGATATAACTTGTCAAGATTTTGTTCAACTTTCTCCCAAACCAAACAAGTCTTGGAGGAAGCTCTTGTTCAAGGTTCAAGCTCAGAGTTTCTTGGATATTCCTCCTCTTGTCATACAGGTGACGTATCTCCGTTGTGGGGGTATGATCCTCTGCACCGCGATCAATCATTGCCTCTGCGACGGCATTGGCACATCGCAGTTCCTACATGCATGGGCCCATGCGACCACTAGCCAAGCTCATCTTCCGACCCGACCATTCCACTCCCGTCACGTATTAGATCCGCGAAACCCTCCACGTGTCACACACTCACATCCCGGTTTCACCCGAACCACCACCGTAGACAAAAGCTCCACCTTCGACATTTCCAAGTATTTACAGTCCCAACCATTGGCTCCTGCCACCTTAACCTTCAACCAATCTCATCTCCTACGCTTAAAGAAAACCTGCGCTCCTTCGCTAAAATGCACCACGTTCGAGGCACTAGCGGCTAACACTTGGCGCTCGTGGGCTCAATCTCTAGATTTACCAATGACCATGCTGGTCAAACTCTTATTCTCAGTCAATATGAGAAAACGACTAACTCCAGAACTTCCCCAAGGGTATTACGGTAATGGATTCGTACTAGCTTGCGCCGAGAGCAAGGTACAAGACCTAGTCAATGGTAATATTTACCACGCTGTAAAATCGATACAAGAGGCAAAATCAAGAATTACCGACGAATATGTAAGATCAACGATAGATTTACTGGAGGATAAAACGGTGAAAACGGACGTCTCGTGCAGTTTGGTCATTTCACAATGGGCGAAATTGGGATTAGAGGAGTTGGACTTGGGAGGAGGAAAGCCAATGTATATGGGTCCTTTGACGAGTGATATCTACTGTTTATTTTTACCCGTGGCGAGCGATAATGATGCCATCAGAGTTCAAATGTCCCTGCCGGAGGAAGTTGTGAAGAGACTAGAGTATTGCATGGTTAAGTTTTTAGACGGAAAAGATAACGAAGATGAGAATTCTCGTGCATGCTAA

Protein Analysis

442

Amino Acids

49.8

Weight (kDa)

6.67

Isoelectric Point (pI)

43.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 15 - 421 7.3e-76 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014544)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G27620
fragaria_vesca FvH4_2g39380
malus_domestica MD08G1026100.v1.1 MD15G1022800.v1.1
prunus_persica Prupe.1G374800_v2.0.a1
pyrus_communis pycom08g02020 pycom15g01910
rosa_chinensis RchiOBHm_Chr6g0301621
rosa_laevigata RLG00000011238
rosa_multiflora Rmu_ssc0000452.1_g000013
rosa_roxburghii Rroxscaffold_7G00166590
rosa_rugosa Rorug06G0307400
rosa_samantha Rh6AG420200 Rh6BG426400 Rh6CG433200 Rh6DG419700
rosa_wichuraiana Rw6G036330

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1077
Acc36I ACCTGC 1 cut(s) 755
AccB7I CCANNNNNTGG 1 cut(s) 691
AccI GTMKAC 2 cut(s) 261, 642
AccII CGCG 3 cut(s) 218, 461, 586
AciI CCGC 4 cut(s) 218, 459, 584, 788
AclWI GGATC 2 cut(s) 442, 575
AcsI RAATTY 1 cut(s) 1312
AcvI CACGTG 1 cut(s) 599
AcyI GRCGYC 1 cut(s) 1074
AfaI GTAC 4 cut(s) 26, 134, 924, 948
AfiI CCNNNNNNNGG 6 cut(s) 217, 218, 243, 439, 691, 1243
AflIII ACRYGT 1 cut(s) 598
AgsI TTSAA 6 cut(s) 93, 329, 373, 380, 715, 1229
AjuI GAANNNNNNNTTGG 2 cut(s) 528, 560
AluBI AGCT 7 cut(s) 253, 296, 364, 383, 539, 651, 929
AluI AGCT 7 cut(s) 253, 296, 364, 383, 539, 651, 929
Alw26I GTCTC 3 cut(s) 238, 1081, 1252
AlwI GGATC 2 cut(s) 442, 575
Ama87I CYCGRG 1 cut(s) 254
AoxI GGCC 1 cut(s) 516
ApaI GGGCCC 1 cut(s) 520
ApoI RAATTY 1 cut(s) 1312
AspLEI GCGC 4 cut(s) 281, 752, 804, 935
AspS9I GGNCC 3 cut(s) 516, 517, 1160
AsuC2I CCSGG 1 cut(s) 618
AsuHPI GGTGA 4 cut(s) 160, 433, 616, 1075
AvaI CYCGRG 1 cut(s) 254
AvaII GGWCC 1 cut(s) 1160
BaeGI GKGCMC 1 cut(s) 520
BanII GRGCYC 2 cut(s) 520, 814
BauI CACGAG 3 cut(s) 805, 1078, 1317
BbrPI CACGTG 1 cut(s) 599
BccI CCATC 2 cut(s) 114, 1226
BceAI ACGGC 1 cut(s) 499
BcgI CGANNNNNNTGC 4 cut(s) 757, 791, 1196, 1230
BcnI CCSGG 1 cut(s) 618
BcoDI GTCTC 3 cut(s) 238, 1081, 1252
BfaI CTAG 8 cut(s) 189, 197, 531, 785, 821, 926, 956, 1262
BfoI RGCGCY 1 cut(s) 805
BfuAI ACCTGC 1 cut(s) 755
BisI GCNGC 1 cut(s) 789
BlsI GCNGC 1 cut(s) 790
Bme1390I CCNGG 1 cut(s) 618
Bme18I GGWCC 1 cut(s) 1160
BmeT110I CYCGRG 1 cut(s) 254
BmgT120I GGNCC 3 cut(s) 516, 517, 1160
BmiI GGNNCC 3 cut(s) 518, 696, 1161
BmrFI CCNGG 1 cut(s) 618
BmsI GCATC 1 cut(s) 1204
BpmI CTGGAG 2 cut(s) 870, 1070
BpuMI CCSGG 1 cut(s) 618
Bsa29I ATCGAT 1 cut(s) 989
BsaAI YACGTR 2 cut(s) 574, 599
BsaHI GRCGYC 1 cut(s) 1074
BsaJI CCNNGG 2 cut(s) 898, 1197
BsaXI ACNNNNNCTCC 4 cut(s) 635, 665, 736, 766
Bsc4I CCNNNNNNNGG 6 cut(s) 217, 218, 243, 439, 691, 1243
Bse1I ACTGG 1 cut(s) 1053
Bse3DI GCAATG 1 cut(s) 469
BseCI ATCGAT 1 cut(s) 989
BseDI CCNNGG 2 cut(s) 898, 1197
BseGI GGATG 1 cut(s) 613
BseLI CCNNNNNNNGG 6 cut(s) 217, 218, 243, 439, 691, 1243
BseMI GCAATG 1 cut(s) 469
BseMII CTCAG 3 cut(s) 130, 398, 873
BseNI ACTGG 1 cut(s) 1053
BseRI GAGGAG 3 cut(s) 396, 1136, 1152
BseSI GKGCMC 1 cut(s) 520
BsgI GTGCAG 2 cut(s) 439, 1102
Bsh1236I CGCG 3 cut(s) 218, 461, 586
BshFI GGCC 1 cut(s) 518
BshVI ATCGAT 1 cut(s) 989
BsiHKCI CYCGRG 1 cut(s) 254
BsiSI CCGG 3 cut(s) 14, 618, 1241
BslFI GGGAC 2 cut(s) 667, 1219
BslI CCNNNNNNNGG 6 cut(s) 217, 218, 243, 439, 691, 1243
BsmAI GTCTC 3 cut(s) 238, 1081, 1252
BsmBI CGTCTC 1 cut(s) 1081
BsmFI GGGAC 2 cut(s) 667, 1219
BsnI GGCC 1 cut(s) 518
BsoBI CYCGRG 1 cut(s) 254
Bsp120I GGGCCC 1 cut(s) 516
Bsp1286I GDGCHC 2 cut(s) 520, 814
Bsp143I GATC 4 cut(s) 447, 462, 580, 1031
BspACI CCGC 4 cut(s) 218, 459, 584, 788
BspANI GGCC 1 cut(s) 518
BspCNI CTCAG 3 cut(s) 129, 397, 872
BspDI ATCGAT 1 cut(s) 989
BspFNI CGCG 3 cut(s) 218, 461, 586
BspLI GGNNCC 3 cut(s) 518, 696, 1161
BspMI ACCTGC 1 cut(s) 755
BspPI GGATC 2 cut(s) 442, 575
BsrDI GCAATG 1 cut(s) 469
BsrI ACTGG 1 cut(s) 1053
BssECI CCNNGG 2 cut(s) 898, 1197
BssMI GATC 4 cut(s) 447, 462, 580, 1031
BssNI GRCGYC 1 cut(s) 1074
BssSI CACGAG 3 cut(s) 805, 1078, 1317
BssT1I CCWWGG 1 cut(s) 898
Bst2BI CACGAG 3 cut(s) 805, 1078, 1317
Bst4CI ACNGT 6 cut(s) 266, 640, 681, 911, 1063, 1184
Bst6I CTCTTC 1 cut(s) 1250
BstACI GRCGYC 1 cut(s) 1074
BstAPI GCANNNNNTGC 1 cut(s) 10
BstBAI YACGTR 2 cut(s) 574, 599
BstC8I GCNNGC 4 cut(s) 251, 931, 1204, 1324
BstDEI CTNAG 3 cut(s) 116, 384, 859
BstDSI CCRYGG 1 cut(s) 1197
BstENI CCTNNNNNAGG 1 cut(s) 1241
BstF5I GGATG 1 cut(s) 613
BstFNI CGCG 3 cut(s) 218, 461, 586
BstH2I RGCGCY 1 cut(s) 805
BstHHI GCGC 4 cut(s) 281, 752, 804, 935
BstKTI GATC 4 cut(s) 450, 465, 583, 1034
BstMAI GTCTC 3 cut(s) 238, 1081, 1252
BstMBI GATC 4 cut(s) 447, 462, 580, 1031
BstMWI GCNNNNNNNGC 4 cut(s) 10, 287, 788, 939
BstNSI RCATGY 2 cut(s) 512, 1326
BstSCI CCNGG 1 cut(s) 616
BstSLI GKGCMC 1 cut(s) 520
BstUI CGCG 3 cut(s) 218, 461, 586
BstX2I RGATCY 1 cut(s) 580
BstYI RGATCY 1 cut(s) 580
Bsu15I ATCGAT 1 cut(s) 989
BsuRI GGCC 1 cut(s) 518
BsuTUI ATCGAT 1 cut(s) 989
BtgI CCRYGG 1 cut(s) 1197
BtgZI GCGATG 1 cut(s) 480
BtsCI GGATG 1 cut(s) 613
BveI ACCTGC 1 cut(s) 755
Cac8I GCNNGC 4 cut(s) 251, 931, 1204, 1324
CfoI GCGC 4 cut(s) 281, 752, 804, 935
Cfr13I GGNCC 3 cut(s) 516, 517, 1160
ClaI ATCGAT 1 cut(s) 989
Csp6I GTAC 4 cut(s) 25, 133, 923, 947
CviAII CATG 7 cut(s) 301, 509, 513, 521, 838, 1273, 1323
CviQI GTAC 4 cut(s) 25, 133, 923, 947
DdeI CTNAG 3 cut(s) 116, 384, 859
DpnI GATC 4 cut(s) 449, 464, 582, 1033
DpnII GATC 4 cut(s) 447, 462, 580, 1031
Eam1104I CTCTTC 1 cut(s) 1250
EarI CTCTTC 1 cut(s) 1250
Eco130I CCWWGG 1 cut(s) 898
Eco24I GRGCYC 2 cut(s) 520, 814
Eco32I GATATC 1 cut(s) 1177
Eco47I GGWCC 1 cut(s) 1160
Eco72I CACGTG 1 cut(s) 599
Eco88I CYCGRG 1 cut(s) 254
EcoNI CCTNNNNNAGG 1 cut(s) 1241
EcoO109I RGGNCCY 1 cut(s) 1160
EcoRI GAATTC 1 cut(s) 1312
EcoRV GATATC 1 cut(s) 1177
EcoT14I CCWWGG 1 cut(s) 898
EcoT22I ATGCAT 1 cut(s) 514
EcoT38I GRGCYC 2 cut(s) 520, 814
ErhI CCWWGG 1 cut(s) 898
Esp3I CGTCTC 1 cut(s) 1081
FaeI CATG 7 cut(s) 304, 512, 516, 524, 841, 1276, 1326
FalI AAGNNNNNCTT 2 cut(s) 528, 560
FaqI GGGAC 2 cut(s) 667, 1219
FatI CATG 7 cut(s) 300, 508, 512, 520, 837, 1272, 1322
FauI CCCGC 1 cut(s) 211
FblI GTMKAC 2 cut(s) 261, 642
Fnu4HI GCNGC 1 cut(s) 789
FokI GGATG 1 cut(s) 600
FriOI GRGCYC 2 cut(s) 520, 814
Fsp4HI GCNGC 1 cut(s) 789
FspBI CTAG 8 cut(s) 189, 197, 531, 785, 821, 926, 956, 1262
GlaI GCGC 4 cut(s) 280, 751, 803, 934
GluI GCNGC 1 cut(s) 789
GsuI CTGGAG 2 cut(s) 870, 1070
HaeII RGCGCY 1 cut(s) 805
HaeIII GGCC 1 cut(s) 518
HapII CCGG 3 cut(s) 14, 618, 1241
HhaI GCGC 4 cut(s) 281, 752, 804, 935
Hin1I GRCGYC 1 cut(s) 1074
Hin1II CATG 7 cut(s) 304, 512, 516, 524, 841, 1276, 1326
Hin6I GCGC 4 cut(s) 279, 750, 802, 933
HinP1I GCGC 4 cut(s) 279, 750, 802, 933
HindIII AAGCTT 1 cut(s) 294
HinfI GANTC 4 cut(s) 120, 179, 231, 918
HpaII CCGG 3 cut(s) 14, 618, 1241
HphI GGTGA 4 cut(s) 160, 433, 616, 1075
Hpy166II GTNNAC 2 cut(s) 262, 643
Hpy188I TCNGA 6 cut(s) 119, 225, 238, 387, 549, 1223
Hpy188III TCNNGA 4 cut(s) 317, 821, 887, 1008
Hpy8I GTNNAC 2 cut(s) 262, 643
Hpy99I CGWCG 3 cut(s) 104, 485, 1022
HpyAV CCTTC 5 cut(s) 236, 269, 667, 721, 765
HpyCH4III ACNGT 6 cut(s) 266, 640, 681, 911, 1063, 1184
HpyCH4IV ACGT 5 cut(s) 425, 573, 598, 773, 1074
HpyCH4V TGCA 7 cut(s) 4, 456, 512, 768, 1083, 1272, 1322
HpyF10VI GCNNNNNNNGC 4 cut(s) 10, 287, 788, 939
HpyF3I CTNAG 3 cut(s) 116, 384, 859
HpySE526I ACGT 5 cut(s) 425, 573, 598, 773, 1074
Hsp92I GRCGYC 1 cut(s) 1074
Hsp92II CATG 7 cut(s) 304, 512, 516, 524, 841, 1276, 1326
HspAI GCGC 4 cut(s) 279, 750, 802, 933
Kzo9I GATC 4 cut(s) 447, 462, 580, 1031
LmnI GCTCC 4 cut(s) 246, 656, 700, 757
LweI GCATC 1 cut(s) 1204
MaeI CTAG 8 cut(s) 189, 197, 531, 785, 821, 926, 956, 1262
MaeII ACGT 5 cut(s) 425, 573, 598, 773, 1074
MaeIII GTNAC 3 cut(s) 421, 569, 601
MalI GATC 4 cut(s) 449, 464, 582, 1033
MboI GATC 4 cut(s) 447, 462, 580, 1031
MboII GAAGA 3 cut(s) 536, 1267, 1316
MflI RGATCY 1 cut(s) 580
MhlI GDGCHC 2 cut(s) 520, 814
MluCI AATT 3 cut(s) 1011, 1109, 1312
MlyI GAGTC 1 cut(s) 240
MmeI TCCRAC 3 cut(s) 203, 572, 1107
Mph1103I ATGCAT 1 cut(s) 514
MseI TTAA 4 cut(s) 47, 707, 737, 1278
MslI CAYNNNNRTG 1 cut(s) 419
MspI CCGG 3 cut(s) 14, 618, 1241
MspR9I CCNGG 1 cut(s) 618
MvnI CGCG 3 cut(s) 218, 461, 586
MwoI GCNNNNNNNGC 4 cut(s) 10, 287, 788, 939
NciI CCSGG 1 cut(s) 618
NdeII GATC 4 cut(s) 447, 462, 580, 1031
NlaIII CATG 7 cut(s) 304, 512, 516, 524, 841, 1276, 1326
NlaIV GGNNCC 3 cut(s) 518, 696, 1161
NmeAIII GCCGAG 1 cut(s) 961
NmuCI GTSAC 3 cut(s) 421, 569, 601
NsiI ATGCAT 1 cut(s) 514
NspI RCATGY 2 cut(s) 512, 1326
PaeI GCATGC 1 cut(s) 1326
PaeR7I CTCGAG 1 cut(s) 254
PcsI WCGNNNNNNNCGW 1 cut(s) 1076
PfeI GAWTC 3 cut(s) 120, 179, 918
PflFI GACNNNGTC 1 cut(s) 956
PflMI CCANNNNNTGG 1 cut(s) 691
PkrI GCNGC 1 cut(s) 790
PleI GAGTC 1 cut(s) 239
PmaCI CACGTG 1 cut(s) 599
PmlI CACGTG 1 cut(s) 599
PpsI GAGTC 1 cut(s) 239
Ppu21I YACGTR 2 cut(s) 574, 599
PpuMI RGGWCCY 1 cut(s) 1160
Psp5II RGGWCCY 1 cut(s) 1160
PspCI CACGTG 1 cut(s) 599
PspN4I GGNNCC 3 cut(s) 518, 696, 1161
PspOMI GGGCCC 1 cut(s) 516
PspPI GGNCC 3 cut(s) 516, 517, 1160
PspPPI RGGWCCY 1 cut(s) 1160
PspXI VCTCGAGB 1 cut(s) 254
PsuI RGATCY 1 cut(s) 580
PsyI GACNNNGTC 1 cut(s) 956
RsaI GTAC 4 cut(s) 26, 134, 924, 948
RsaNI GTAC 4 cut(s) 25, 133, 923, 947
RseI CAYNNNNRTG 1 cut(s) 419
SaqAI TTAA 4 cut(s) 47, 707, 737, 1278
SatI GCNGC 1 cut(s) 789
Sau3AI GATC 4 cut(s) 447, 462, 580, 1031
Sau96I GGNCC 3 cut(s) 516, 517, 1160
SchI GAGTC 1 cut(s) 240
ScrFI CCNGG 1 cut(s) 618
SduI GDGCHC 2 cut(s) 520, 814
SfaNI GCATC 1 cut(s) 1204
Sfr274I CTCGAG 1 cut(s) 254
SinI GGWCC 1 cut(s) 1160
SlaI CTCGAG 1 cut(s) 254
SmiMI CAYNNNNRTG 1 cut(s) 419
SmlI CTYRAG 1 cut(s) 254
SmoI CTYRAG 1 cut(s) 254
SphI GCATGC 1 cut(s) 1326
Sse9I AATT 3 cut(s) 1011, 1109, 1312
SsiI CCGC 4 cut(s) 218, 459, 584, 788
SspI AATATT 1 cut(s) 970
SspMI CTAG 8 cut(s) 189, 197, 531, 785, 821, 926, 956, 1262
StyD4I CCNGG 1 cut(s) 616
StyI CCWWGG 1 cut(s) 898
TaaI ACNGT 6 cut(s) 266, 640, 681, 911, 1063, 1184
TaiI ACGT 5 cut(s) 428, 576, 601, 776, 1077
TaqI TCGA 5 cut(s) 99, 255, 660, 777, 989
TasI AATT 3 cut(s) 1011, 1109, 1312
TauI GCSGC 1 cut(s) 791
TfiI GAWTC 3 cut(s) 120, 179, 918
Tru1I TTAA 4 cut(s) 47, 707, 737, 1278
Tru9I TTAA 4 cut(s) 47, 707, 737, 1278
TseFI GTSAC 3 cut(s) 421, 569, 601
Tsp45I GTSAC 3 cut(s) 421, 569, 601
TspDTI ATGAA 2 cut(s) 255, 289
TspGWI ACGGA 3 cut(s) 422, 1085, 1305
Tth111I GACNNNGTC 1 cut(s) 956
Van91I CCANNNNNTGG 1 cut(s) 691
VpaK11BI GGWCC 1 cut(s) 1160
XagI CCTNNNNNAGG 1 cut(s) 1241
XapI RAATTY 1 cut(s) 1312
XbaI TCTAGA 1 cut(s) 820
XceI RCATGY 2 cut(s) 512, 1326
XcmI CCANNNNNNNNNTGG 1 cut(s) 351
XhoI CTCGAG 1 cut(s) 254
XmiI GTMKAC 2 cut(s) 261, 642
XspI CTAG 8 cut(s) 189, 197, 531, 785, 821, 926, 956, 1262
ZraI GACGTC 1 cut(s) 1075
Zsp2I ATGCAT 1 cut(s) 514
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.