Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0014544

Physical Location & Seq

Genomic Coordinates Reverse (-)

64786794 .. 64789197

Gene Structure 2404 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG426400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1380 bp

ATGTTAACAGCTCCATATGAACTGCCGGATTGTTTATATGCAACACAACCAACACTAATCCGCCCAAACACGCCAACTCCCAAGCATTGCCTCCCTCTCTCCAATCTCGATGACCAGAAGTTTCTCCGATTCTCGATCAAATATCTCTACCTCTTCAAAACTTCTGTCAACTTAGACGCCATGAAATATGCCCTCTCTAAACTCCTGGTCCTCTACTACCCATTGGCCGGGAGGTTGAGGACCAGCCCCGACCATGATCAGAAGCTCGAGGTCGACTGCAATGGAGAGGGTGCTGTCTTTGCTGAGGCCTTCATGGATATCACTGCTGACCAGTTTCTTCAGCTTTCCGAGAAGCCAAACAGGTCTTGGAAGAAACTCTTGTACAAGGTCGAAGGAGCTCTCACTTTCTTGGATGTTCCTCCTCTTGTTGTTCAGGTCACGAATCTCCGCTTTGGTGGTATGATCCTCTGCACCGCAATCAATCACTGCTTATGCGACGGCATTGGCACGTCACAGTTTTTACAAGCCTGGGCCCACCTAACAGTCAAACCAGATCTTGCTCCACCAATCTTACCCGTCCATTCTCGCCACGTGCTGAAATCCCGTACTCCTCCAAAGGTAACCTTCCCTCACCCCCAGTTTACCATGAATAGGGACAACAGCCACGTGGACGTCCTGAGATTCCTCCAATCTCAGCCGCTCGTCCCCACATCCTTAACCTTCACCCACTCTCATATCCTTCACCTCAAGCGCCAGTGCGTACCCTCGCTAAAATGCACAGCTTTCGAAGCCCTAGCCTCGCACACGTGGCGCTCCTGGGTTAGGTCCTTGGATCTGTCACCCTCCCTCAACATAAAGCTCCTCTTCTCGGTTAACGTCCGGCGAAGGCTAAATCCGGAAATTCCACCAGCTTATTACGGTAACGGCTTCGTGCTAGGATGCGCACAAACCACCGTGGAGGACCTGGTCTCTGCTAACCTGCACCACGGCGTGAAGTTGGTCCAACAAGCCAAGGCAGAGCTTAGTGACGATTACGTGAGGTCTATGGTTGATTTATTGGAGGACAAAACGGTAAAAACGGATCTGTCGACGAGTTTGGTTATATCACAGTGGGCTAAGCTAGGGTTAGAGGAGTTGGATTTTGGAGATGGAAAGGCGCTGCACATGGGTCCGGTAACAAGTGATGTTTACTGCCTGTTTTTACCGGTTATCGGAGATTCAGGTGCGGTGAGAGTGCTGGTGTCGGTGCCGGAGAGAGTGGCGGAGAAATTTGGATATTGCATGACTGAGTTTTTGGACAAAGAGGTGATCAACAATGGAGATGAACATCATGCTATTAATGGTTATCATGCAGCAGACAATGGAATTATGGAATATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005975 GO:0005976 GO:0006725 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009664 GO:0009698 GO:0009699 GO:0009832 GO:0009987 GO:0010345 GO:0010383 GO:0010393 GO:0016043 GO:0016051 GO:0016740 GO:0016746 GO:0016747 GO:0017144 GO:0019438 GO:0019748 GO:0033692 GO:0034637 GO:0034645 GO:0042546 GO:0043170 GO:0044036 GO:0044038 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044550 GO:0045229 GO:0045488 GO:0045489 GO:0050734 GO:0052325 GO:0052546 GO:0070589 GO:0070592 GO:0071554 GO:0071555 GO:0071669 GO:0071704 GO:0071840 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Transferase

Protein Analysis

459

Amino Acids

51.45

Weight (kDa)

6.65

Isoelectric Point (pI)

37.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Transferase	PF02458	16 - 424	2.8e-68	Transferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014544)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27620
fragaria_vesca	FvH4_2g39380
malus_domestica	MD08G1026100.v1.1 MD15G1022800.v1.1
prunus_persica	Prupe.1G374800_v2.0.a1
pyrus_communis	pycom08g02020 pycom15g01910
rosa_chinensis	RchiOBHm_Chr6g0301621
rosa_laevigata	RLG00000011238
rosa_multiflora	Rmu_ssc0000452.1_g000013
rosa_roxburghii	Rroxscaffold_7G00166590
rosa_rugosa	Rorug06G0307400
rosa_samantha	Rh6AG420200 Rh6BG426400 Rh6CG433200 Rh6DG419700
rosa_wichuraiana	Rw6G036330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	675
Acc16I	TGCGCA	1 cut(s)	943
Acc36I	ACCTGC	1 cut(s)	987
AccB1I	GGYRCC	1 cut(s)	1246
AccBSI	CCGCTC	1 cut(s)	700
AccI	GTMKAC	2 cut(s)	273, 1088
AccIII	TCCGGA	1 cut(s)	895
AciI	CCGC	6 cut(s)	61, 448, 474, 698, 1226, 1262
AclWI	GGATC	3 cut(s)	457, 840, 1089
AcoI	YGGCCR	1 cut(s)	225
AcsI	RAATTY	2 cut(s)	900, 1268
AcuI	CTGAAG	1 cut(s)	323
AcvI	CACGTG	3 cut(s)	592, 667, 807
AcyI	GRCGYC	2 cut(s)	177, 672
AdeI	CACNNNGTG	1 cut(s)	991
AfaI	GTAC	3 cut(s)	383, 607, 762
AfiI	CCNNNNNNNGG	5 cut(s)	227, 651, 822, 868, 1211
AflIII	ACRYGT	1 cut(s)	804
AgeI	ACCGGT	1 cut(s)	1204
AgsI	TTSAA	1 cut(s)	157
AjiI	CACGTC	1 cut(s)	510
AjnI	CCWGG	4 cut(s)	204, 527, 815, 963
AluBI	AGCT	9 cut(s)	11, 265, 343, 398, 782, 859, 911, 1021, 1120
AluI	AGCT	9 cut(s)	11, 265, 343, 398, 782, 859, 911, 1021, 1120
Alw21I	GWGCWC	1 cut(s)	400
Alw26I	GTCTC	1 cut(s)	973
AlwI	GGATC	3 cut(s)	457, 840, 1089
Ama87I	CYCGRG	1 cut(s)	266
Aor13HI	TCCGGA	1 cut(s)	895
AoxI	GGCC	3 cut(s)	225, 306, 531
ApaI	GGGCCC	1 cut(s)	535
ApeKI	GCWGC	2 cut(s)	1159, 1352
ApoI	RAATTY	2 cut(s)	900, 1268
ArsI	GACNNNNNNTTYG	4 cut(s)	150, 182, 1276, 1308
AseI	ATTAAT	1 cut(s)	1338
AsiGI	ACCGGT	1 cut(s)	1204
AspLEI	GCGC	4 cut(s)	753, 813, 944, 1159
AspS9I	GGNCC	8 cut(s)	208, 240, 531, 532, 825, 961, 1000, 1169
AsuC2I	CCSGG	1 cut(s)	229
AsuHPI	GGTGA	6 cut(s)	623, 715, 734, 831, 1240, 1318
AsuII	TTCGAA	1 cut(s)	786
AvaI	CYCGRG	1 cut(s)	266
AvaII	GGWCC	6 cut(s)	208, 240, 825, 961, 1000, 1169
BaeGI	GKGCMC	1 cut(s)	535
BanI	GGYRCC	1 cut(s)	1246
BanII	GRGCYC	2 cut(s)	400, 535
BbrPI	CACGTG	3 cut(s)	592, 667, 807
Bbv12I	GWGCWC	1 cut(s)	400
BbvCI	CCTCAGC	1 cut(s)	303
BbvI	GCAGC	2 cut(s)	1146, 1364
BccI	CCATC	1 cut(s)	1142
BceAI	ACGGC	3 cut(s)	514, 940, 1003
BcgI	CGANNNNNNTGC	2 cut(s)	766, 800
BciT130I	CCWGG	4 cut(s)	206, 529, 817, 965
BclI	TGATCA	2 cut(s)	256, 1308
BcnI	CCSGG	1 cut(s)	229
BcoDI	GTCTC	1 cut(s)	973
BfaI	CTAG	3 cut(s)	794, 935, 1121
BfoI	RGCGCY	3 cut(s)	754, 814, 1160
BfuAI	ACCTGC	1 cut(s)	987
BglII	AGATCT	1 cut(s)	553
BisI	GCNGC	3 cut(s)	698, 1160, 1353
BlpI	GCTNAGC	1 cut(s)	1116
BlsI	GCNGC	3 cut(s)	699, 1161, 1354
Bme1390I	CCNGG	5 cut(s)	206, 229, 529, 817, 965
Bme18I	GGWCC	6 cut(s)	208, 240, 825, 961, 1000, 1169
BmeT110I	CYCGRG	1 cut(s)	266
BmgBI	CACGTC	1 cut(s)	510
BmgT120I	GGNCC	8 cut(s)	208, 240, 531, 532, 825, 961, 1000, 1169
BmiI	GGNNCC	3 cut(s)	533, 1170, 1248
BmrFI	CCNGG	5 cut(s)	206, 229, 529, 817, 965
BmrI	ACTGGG	1 cut(s)	631
BmsI	GCATC	1 cut(s)	929
BmuI	ACTGGG	1 cut(s)	631
Bpu10I	CCTNAGC	1 cut(s)	303
Bpu1102I	GCTNAGC	1 cut(s)	1116
Bpu14I	TTCGAA	1 cut(s)	786
BpuEI	CTTGAG	1 cut(s)	731
BpuMI	CCSGG	1 cut(s)	229
BsaAI	YACGTR	4 cut(s)	592, 667, 807, 1036
BsaBI	GATNNNNATC	1 cut(s)	1326
BsaHI	GRCGYC	2 cut(s)	177, 672
BsaI	GGTCTC	1 cut(s)	973
BsaJI	CCNNGG	6 cut(s)	528, 816, 828, 954, 985, 1011
BsaWI	WCCGGW	3 cut(s)	895, 1171, 1204
BsaXI	ACNNNNNCTCC	2 cut(s)	61, 91
Bsc4I	CCNNNNNNNGG	5 cut(s)	227, 651, 822, 868, 1211
Bse118I	RCCGGY	1 cut(s)	1204
Bse1I	ACTGG	3 cut(s)	331, 637, 754
Bse3DI	GCAATG	2 cut(s)	85, 286
Bse8I	GATNNNNATC	1 cut(s)	1326
BseAI	TCCGGA	1 cut(s)	895
BseBI	CCWGG	4 cut(s)	206, 529, 817, 965
BseDI	CCNNGG	6 cut(s)	528, 816, 828, 954, 985, 1011
BseGI	GGATG	3 cut(s)	418, 710, 944
BseJI	GATNNNNATC	1 cut(s)	1326
BseLI	CCNNNNNNNGG	5 cut(s)	227, 651, 822, 868, 1211
BseMI	GCAATG	2 cut(s)	85, 286
BseMII	CTCAG	4 cut(s)	294, 668, 707, 1278
BseNI	ACTGG	3 cut(s)	331, 637, 754
BseRI	GAGGAG	4 cut(s)	411, 600, 851, 1145
BseSI	GKGCMC	1 cut(s)	535
BseXI	GCAGC	2 cut(s)	1146, 1364
BsgI	GTGCAG	3 cut(s)	454, 965, 1145
BshFI	GGCC	3 cut(s)	227, 308, 533
BshNI	GGYRCC	1 cut(s)	1246
BshTI	ACCGGT	1 cut(s)	1204
BsiHKAI	GWGCWC	1 cut(s)	400
BsiHKCI	CYCGRG	1 cut(s)	266
BsiSI	CCGG	7 cut(s)	26, 228, 880, 896, 1172, 1205, 1250
BslFI	GGGAC	2 cut(s)	668, 689
BslI	CCNNNNNNNGG	5 cut(s)	227, 651, 822, 868, 1211
BsmAI	GTCTC	1 cut(s)	973
BsmFI	GGGAC	2 cut(s)	668, 689
BsnI	GGCC	3 cut(s)	227, 308, 533
Bso31I	GGTCTC	1 cut(s)	973
BsoBI	CYCGRG	1 cut(s)	266
Bsp119I	TTCGAA	1 cut(s)	786
Bsp120I	GGGCCC	1 cut(s)	531
Bsp1286I	GDGCHC	2 cut(s)	400, 535
Bsp13I	TCCGGA	1 cut(s)	895
Bsp1407I	TGTACA	1 cut(s)	381
Bsp143I	GATC	7 cut(s)	135, 256, 462, 553, 832, 1081, 1308
Bsp1720I	GCTNAGC	1 cut(s)	1116
BspACI	CCGC	6 cut(s)	61, 448, 474, 698, 1226, 1262
BspANI	GGCC	3 cut(s)	227, 308, 533
BspCNI	CTCAG	4 cut(s)	295, 669, 706, 1279
BspEI	TCCGGA	1 cut(s)	895
BspLI	GGNNCC	3 cut(s)	533, 1170, 1248
BspMI	ACCTGC	1 cut(s)	987
BspPI	GGATC	3 cut(s)	457, 840, 1089
BspT104I	TTCGAA	1 cut(s)	786
BspT107I	GGYRCC	1 cut(s)	1246
BspTNI	GGTCTC	1 cut(s)	973
BsrBI	CCGCTC	1 cut(s)	700
BsrDI	GCAATG	2 cut(s)	85, 286
BsrFI	RCCGGY	1 cut(s)	1204
BsrGI	TGTACA	1 cut(s)	381
BsrI	ACTGG	3 cut(s)	331, 637, 754
BssAI	RCCGGY	1 cut(s)	1204
BssECI	CCNNGG	6 cut(s)	528, 816, 828, 954, 985, 1011
BssMI	GATC	7 cut(s)	135, 256, 462, 553, 832, 1081, 1308
BssNI	GRCGYC	2 cut(s)	177, 672
BssT1I	CCWWGG	2 cut(s)	828, 1011
Bst2UI	CCWGG	4 cut(s)	206, 529, 817, 965
Bst4CI	ACNGT	6 cut(s)	516, 544, 920, 955, 1072, 1110
Bst6I	CTCTTC	2 cut(s)	158, 869
BstACI	GRCGYC	2 cut(s)	177, 672
BstAUI	TGTACA	1 cut(s)	381
BstBAI	YACGTR	4 cut(s)	592, 667, 807, 1036
BstBI	TTCGAA	1 cut(s)	786
BstDEI	CTNAG	7 cut(s)	172, 303, 677, 693, 1022, 1116, 1287
BstDSI	CCRYGG	2 cut(s)	954, 985
BstEII	GGTNACC	1 cut(s)	619
BstENI	CCTNNNNNAGG	1 cut(s)	820
BstF5I	GGATG	3 cut(s)	418, 710, 944
BstH2I	RGCGCY	3 cut(s)	754, 814, 1160
BstHHI	GCGC	4 cut(s)	753, 813, 944, 1159
BstKTI	GATC	7 cut(s)	138, 259, 465, 556, 835, 1084, 1311
BstMAI	GTCTC	1 cut(s)	973
BstMBI	GATC	7 cut(s)	135, 256, 462, 553, 832, 1081, 1308
BstMWI	GCNNNNNNNGC	3 cut(s)	299, 788, 808
BstNI	CCWGG	4 cut(s)	206, 529, 817, 965
BstPI	GGTNACC	1 cut(s)	619
BstSCI	CCNGG	5 cut(s)	204, 227, 527, 815, 963
BstSLI	GKGCMC	1 cut(s)	535
BstV1I	GCAGC	2 cut(s)	1146, 1364
BstX2I	RGATCY	3 cut(s)	553, 832, 1081
BstYI	RGATCY	3 cut(s)	553, 832, 1081
BsuRI	GGCC	3 cut(s)	227, 308, 533
BtgI	CCRYGG	2 cut(s)	954, 985
BtrI	CACGTC	1 cut(s)	510
BtsCI	GGATG	3 cut(s)	418, 710, 944
BtsI	GCAGTG	2 cut(s)	321, 484
BtsIMutI	CAGTG	4 cut(s)	321, 484, 761, 1115
BveI	ACCTGC	1 cut(s)	987
CfoI	GCGC	4 cut(s)	753, 813, 944, 1159
Cfr10I	RCCGGY	1 cut(s)	1204
Cfr13I	GGNCC	8 cut(s)	208, 240, 531, 532, 825, 961, 1000, 1169
CseI	GACGC	1 cut(s)	185
CsiI	ACCWGGT	1 cut(s)	963
Csp6I	GTAC	3 cut(s)	382, 606, 761
CspAI	ACCGGT	1 cut(s)	1204
CviAII	CATG	8 cut(s)	181, 254, 313, 646, 1165, 1282, 1331, 1349
CviQI	GTAC	3 cut(s)	382, 606, 761
DdeI	CTNAG	7 cut(s)	172, 303, 677, 693, 1022, 1116, 1287
DpnI	GATC	7 cut(s)	137, 258, 464, 555, 834, 1083, 1310
DpnII	GATC	7 cut(s)	135, 256, 462, 553, 832, 1081, 1308
DraIII	CACNNNGTG	1 cut(s)	991
EaeI	YGGCCR	1 cut(s)	225
Eam1104I	CTCTTC	2 cut(s)	158, 869
EarI	CTCTTC	2 cut(s)	158, 869
EciI	GGCGGA	2 cut(s)	50, 1277
Ecl136II	GAGCTC	1 cut(s)	398
Eco130I	CCWWGG	2 cut(s)	828, 1011
Eco147I	AGGCCT	1 cut(s)	308
Eco24I	GRGCYC	2 cut(s)	400, 535
Eco31I	GGTCTC	1 cut(s)	973
Eco32I	GATATC	1 cut(s)	319
Eco47I	GGWCC	6 cut(s)	208, 240, 825, 961, 1000, 1169
Eco53kI	GAGCTC	1 cut(s)	398
Eco57I	CTGAAG	1 cut(s)	323
Eco72I	CACGTG	3 cut(s)	592, 667, 807
Eco88I	CYCGRG	1 cut(s)	266
Eco91I	GGTNACC	1 cut(s)	619
EcoICRI	GAGCTC	1 cut(s)	398
EcoNI	CCTNNNNNAGG	1 cut(s)	820
EcoO109I	RGGNCCY	2 cut(s)	825, 961
EcoO65I	GGTNACC	1 cut(s)	619
EcoRII	CCWGG	4 cut(s)	204, 527, 815, 963
EcoRV	GATATC	1 cut(s)	319
EcoT14I	CCWWGG	2 cut(s)	828, 1011
EcoT38I	GRGCYC	2 cut(s)	400, 535
ErhI	CCWWGG	2 cut(s)	828, 1011
FaeI	CATG	8 cut(s)	184, 257, 316, 649, 1168, 1285, 1334, 1352
FalI	AAGNNNNNCTT	6 cut(s)	362, 394, 608, 640, 848, 880
FaqI	GGGAC	2 cut(s)	668, 689
FatI	CATG	8 cut(s)	180, 253, 312, 645, 1164, 1281, 1330, 1348
FauNDI	CATATG	1 cut(s)	16
FbaI	TGATCA	2 cut(s)	256, 1308
FblI	GTMKAC	2 cut(s)	273, 1088
Fnu4HI	GCNGC	3 cut(s)	698, 1160, 1353
FokI	GGATG	3 cut(s)	425, 697, 951
FriOI	GRGCYC	2 cut(s)	400, 535
Fsp4HI	GCNGC	3 cut(s)	698, 1160, 1353
FspAI	RTGCGCAY	1 cut(s)	943
FspBI	CTAG	3 cut(s)	794, 935, 1121
FspI	TGCGCA	1 cut(s)	943
GlaI	GCGC	4 cut(s)	752, 812, 943, 1158
GluI	GCNGC	3 cut(s)	698, 1160, 1353
HaeII	RGCGCY	3 cut(s)	754, 814, 1160
HaeIII	GGCC	3 cut(s)	227, 308, 533
HapII	CCGG	7 cut(s)	26, 228, 880, 896, 1172, 1205, 1250
HgaI	GACGC	1 cut(s)	185
HhaI	GCGC	4 cut(s)	753, 813, 944, 1159
Hin1I	GRCGYC	2 cut(s)	177, 672
Hin1II	CATG	8 cut(s)	184, 257, 316, 649, 1168, 1285, 1334, 1352
Hin6I	GCGC	4 cut(s)	751, 811, 942, 1157
HinP1I	GCGC	4 cut(s)	751, 811, 942, 1157
HincII	GTYRAC	5 cut(s)	6, 169, 274, 874, 1089
HindII	GTYRAC	5 cut(s)	6, 169, 274, 874, 1089
HinfI	GANTC	4 cut(s)	129, 442, 681, 1217
HpaI	GTTAAC	2 cut(s)	6, 874
HpaII	CCGG	7 cut(s)	26, 228, 880, 896, 1172, 1205, 1250
HphI	GGTGA	6 cut(s)	623, 715, 734, 831, 1240, 1318
Hpy166II	GTNNAC	8 cut(s)	6, 169, 274, 642, 670, 874, 1089, 1189
Hpy188I	TCNGA	4 cut(s)	128, 261, 349, 1214
Hpy188III	TCNNGA	5 cut(s)	107, 133, 439, 676, 896
Hpy8I	GTNNAC	8 cut(s)	6, 169, 274, 642, 670, 874, 1089, 1189
Hpy99I	CGWCG	2 cut(s)	500, 1093
HpyAV	CCTTC	6 cut(s)	319, 386, 634, 730, 749, 879
HpyCH4III	ACNGT	6 cut(s)	516, 544, 920, 955, 1072, 1110
HpyCH4IV	ACGT	7 cut(s)	509, 591, 666, 672, 806, 876, 1035
HpyCH4V	TGCA	8 cut(s)	41, 279, 471, 777, 982, 1162, 1281, 1352
HpyF10VI	GCNNNNNNNGC	3 cut(s)	299, 788, 808
HpyF3I	CTNAG	7 cut(s)	172, 303, 677, 693, 1022, 1116, 1287
HpySE526I	ACGT	7 cut(s)	509, 591, 666, 672, 806, 876, 1035
Hsp92I	GRCGYC	2 cut(s)	177, 672
Hsp92II	CATG	8 cut(s)	184, 257, 316, 649, 1168, 1285, 1334, 1352
HspAI	GCGC	4 cut(s)	751, 811, 942, 1157
Kpn2I	TCCGGA	1 cut(s)	895
Ksp22I	TGATCA	2 cut(s)	256, 1308
KspAI	GTTAAC	2 cut(s)	6, 874
Kzo9I	GATC	7 cut(s)	135, 256, 462, 553, 832, 1081, 1308
LmnI	GCTCC	5 cut(s)	16, 395, 565, 818, 864
Lsp1109I	GCAGC	2 cut(s)	1146, 1364
LweI	GCATC	1 cut(s)	929
MabI	ACCWGGT	1 cut(s)	963
MaeI	CTAG	3 cut(s)	794, 935, 1121
MaeII	ACGT	7 cut(s)	509, 591, 666, 672, 806, 876, 1035
MaeIII	GTNAC	7 cut(s)	436, 510, 619, 837, 920, 1025, 1174
MalI	GATC	7 cut(s)	137, 258, 464, 555, 834, 1083, 1310
MbiI	CCGCTC	1 cut(s)	700
MboI	GATC	7 cut(s)	135, 256, 462, 553, 832, 1081, 1308
MboII	GAAGA	4 cut(s)	145, 329, 382, 856
MflI	RGATCY	3 cut(s)	553, 832, 1081
MhlI	GDGCHC	2 cut(s)	400, 535
MluCI	AATT	3 cut(s)	900, 1268, 1365
MmeI	TCCRAC	2 cut(s)	1027, 1116
MroI	TCCGGA	1 cut(s)	895
MseI	TTAA	5 cut(s)	5, 716, 873, 1338, 1378
MspI	CCGG	7 cut(s)	26, 228, 880, 896, 1172, 1205, 1250
MspR9I	CCNGG	5 cut(s)	206, 229, 529, 817, 965
MvaI	CCWGG	4 cut(s)	206, 529, 817, 965
MwoI	GCNNNNNNNGC	3 cut(s)	299, 788, 808
NciI	CCSGG	1 cut(s)	229
NdeI	CATATG	1 cut(s)	16
NdeII	GATC	7 cut(s)	135, 256, 462, 553, 832, 1081, 1308
NlaIII	CATG	8 cut(s)	184, 257, 316, 649, 1168, 1285, 1334, 1352
NlaIV	GGNNCC	3 cut(s)	533, 1170, 1248
NmuCI	GTSAC	4 cut(s)	436, 510, 837, 1025
NsbI	TGCGCA	1 cut(s)	943
NspV	TTCGAA	1 cut(s)	786
PaeR7I	CTCGAG	1 cut(s)	266
PceI	AGGCCT	1 cut(s)	308
PcsI	WCGNNNNNNNCGW	1 cut(s)	1085
PfeI	GAWTC	4 cut(s)	129, 442, 681, 1217
PflFI	GACNNNGTC	1 cut(s)	965
PinAI	ACCGGT	1 cut(s)	1204
PkrI	GCNGC	3 cut(s)	699, 1161, 1354
PmaCI	CACGTG	3 cut(s)	592, 667, 807
PmlI	CACGTG	3 cut(s)	592, 667, 807
Ppu21I	YACGTR	4 cut(s)	592, 667, 807, 1036
PpuMI	RGGWCCY	2 cut(s)	825, 961
PshBI	ATTAAT	1 cut(s)	1338
Psp124BI	GAGCTC	1 cut(s)	400
Psp5II	RGGWCCY	2 cut(s)	825, 961
Psp6I	CCWGG	4 cut(s)	204, 527, 815, 963
PspCI	CACGTG	3 cut(s)	592, 667, 807
PspEI	GGTNACC	1 cut(s)	619
PspGI	CCWGG	4 cut(s)	204, 527, 815, 963
PspN4I	GGNNCC	3 cut(s)	533, 1170, 1248
PspOMI	GGGCCC	1 cut(s)	531
PspPI	GGNCC	8 cut(s)	208, 240, 531, 532, 825, 961, 1000, 1169
PspPPI	RGGWCCY	2 cut(s)	825, 961
PspXI	VCTCGAGB	1 cut(s)	266
PsuI	RGATCY	3 cut(s)	553, 832, 1081
PsyI	GACNNNGTC	1 cut(s)	965
RsaI	GTAC	3 cut(s)	383, 607, 762
RsaNI	GTAC	3 cut(s)	382, 606, 761
SacI	GAGCTC	1 cut(s)	400
SalI	GTCGAC	2 cut(s)	272, 1087
SaqAI	TTAA	5 cut(s)	5, 716, 873, 1338, 1378
SatI	GCNGC	3 cut(s)	698, 1160, 1353
Sau3AI	GATC	7 cut(s)	135, 256, 462, 553, 832, 1081, 1308
Sau96I	GGNCC	8 cut(s)	208, 240, 531, 532, 825, 961, 1000, 1169
ScrFI	CCNGG	5 cut(s)	206, 229, 529, 817, 965
SduI	GDGCHC	2 cut(s)	400, 535
SexAI	ACCWGGT	1 cut(s)	963
SfaNI	GCATC	1 cut(s)	929
Sfr274I	CTCGAG	1 cut(s)	266
SfuI	TTCGAA	1 cut(s)	786
SinI	GGWCC	6 cut(s)	208, 240, 825, 961, 1000, 1169
SlaI	CTCGAG	1 cut(s)	266
SmlI	CTYRAG	2 cut(s)	266, 746
SmoI	CTYRAG	2 cut(s)	266, 746
Sse9I	AATT	3 cut(s)	900, 1268, 1365
SseBI	AGGCCT	1 cut(s)	308
SsiI	CCGC	6 cut(s)	61, 448, 474, 698, 1226, 1262
SspI	AATATT	1 cut(s)	1376
SspMI	CTAG	3 cut(s)	794, 935, 1121
SstI	GAGCTC	1 cut(s)	400
StuI	AGGCCT	1 cut(s)	308
StyD4I	CCNGG	5 cut(s)	204, 227, 527, 815, 963
StyI	CCWWGG	2 cut(s)	828, 1011
TaaI	ACNGT	6 cut(s)	516, 544, 920, 955, 1072, 1110
TaiI	ACGT	7 cut(s)	512, 594, 669, 675, 809, 879, 1038
TaqI	TCGA	7 cut(s)	108, 134, 267, 273, 390, 786, 1088
TasI	AATT	3 cut(s)	900, 1268, 1365
TatI	WGTACW	1 cut(s)	381
TauI	GCSGC	1 cut(s)	700
TfiI	GAWTC	4 cut(s)	129, 442, 681, 1217
Tru1I	TTAA	5 cut(s)	5, 716, 873, 1338, 1378
Tru9I	TTAA	5 cut(s)	5, 716, 873, 1338, 1378
TscAI	CASTG	4 cut(s)	328, 491, 761, 1115
TseFI	GTSAC	4 cut(s)	436, 510, 837, 1025
TseI	GCWGC	2 cut(s)	1159, 1352
Tsp45I	GTSAC	4 cut(s)	436, 510, 837, 1025
TspDTI	ATGAA	5 cut(s)	33, 197, 301, 662, 1338
TspGWI	ACGGA	1 cut(s)	1094
TspRI	CASTG	4 cut(s)	328, 491, 761, 1115
Tth111I	GACNNNGTC	1 cut(s)	965
VpaK11BI	GGWCC	6 cut(s)	208, 240, 825, 961, 1000, 1169
VspI	ATTAAT	1 cut(s)	1338
XagI	CCTNNNNNAGG	1 cut(s)	820
XapI	RAATTY	2 cut(s)	900, 1268
XcmI	CCANNNNNNNNNTGG	1 cut(s)	363
XhoI	CTCGAG	1 cut(s)	266
XmiI	GTMKAC	2 cut(s)	273, 1088
XspI	CTAG	3 cut(s)	794, 935, 1121
ZraI	GACGTC	1 cut(s)	673

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.