AT1G53700

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
20048434 .. 20050294
1861 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G53700.1

Sequence Viewer

Length: 1431 bp
ATGGAAGACGACGGTTATTACCTCGACACTGATCTCGATCTCAGCTTCACCTCCACAGCCACCGACCGTACATTCACCTCATCAAGCGCTAGATCGAGTCTCGCACGCTCAAGCCTAACCTTAAGCTTCAACGACAGACTCTCAACCGCAACAACACCTTCAACCACCACTTCCTCCGCGGCAACAACACTCCACCACCGTCGTTACGATCCTCACTGGACGTCAATCAGAGCCGCAACAACTCTCTCCTCCGACGGAAGACTCCATCTCCGTCACTTTAAACTCGTCCGACACCTCGGTACAGGAAATCTCGGCCGTGTTTTCCTCTGTCACCTCCGTGATTGCCCTAACCCTACCGGATTCGCACTTAAAGTAATCGATCGTGATGTTCTTACGGCGAAGAAGATTTCACACGTGGAAACAGAAGCTGAGATCCTCTCCTTGCTAGACCACCCGTTCTTACCTACACTCTACGCACGTATCGATGCTTCTCACTATACTTGCCTCCTCATTGATTATTGCCCTAACGGTGATTTACATTCCTTGCTCCGTAAACAACCTAATAACCGGTTACCGATTTCCCCGGTTAGATTCTTCGCCGCCGAAGTACTCGTCGCCTTGGAGTATCTCCACGCCCTTGGAATCGTTTATCGAGATCTCAAACCGGAGAATATCTTGATTCGTGAAGATGGACATATCATGCTCTCAGATTTCGATCTCTGTTTCAAAGCCGATGTAGTTCCAACTTTCCGATCTCGACGATTCCGGAGAACTTCGTCTTCTCCGAGGAAGACTCGTCGTGGTGGCGGTTGTTTCTCCACGGAGGTAGAGTACGAGAGAGAAGAGATAGTAGCGGAATTCGCGGCGGAGCCAGTGACGGCGTTTTCGAAATCGTGTGTAGGAACTCACGAGTATTTAGCGCCGGAGCTAGTCGCCGGAAACGGACACGGAAGCGGTGTAGATTGGTGGGCGTTTGGGATATTTCTATACGAAATGTTATACGGAACGACGCCGTTTAAAGGTGGTACAAAAGAACAAACCCTGCGCAATATAGTATCAAACGATGACGTGGCGTTTACGTTAGAGGAAGAAGGTATGGTTGAAGCCAAGGATTTGATAGAGAAACTGTTAGTGAAAGATCCGAGGAAGAGGCTAGGATGCGCCAGGGGTGCGCAAGATATCAAGAGGCATGAGTTTTTCGAAGGAATCAAGTGGCCGTTGATCAGAAACTATAAGCCGCCGGAGATTCGGGGTCTGGTGAAGAAGACGAAGGCACATGCTGGTCACGTGACTGCTGCTGTTACGCCACGGAGGAATAAGTGGTTGTGGTGGGCGCTATCGCATTTACTGCGTAGTAAAAGCTTGAGCAAGAGTAGCAGTAAAATTCAGAGCAATAATAATTACTATCATTATGTGGGTAAAAAGCTATAA

Protein Analysis

476

Amino Acids

53.82

Weight (kDa)

9.15

Isoelectric Point (pI)

44.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 94 - 243 2.2e-31 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 94 - 243 5.7e-21 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 296 - 400 8e-21 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 301 - 384 2.1e-06 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0016596)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 224
Acc16I TGCGCA 2 cut(s) 1046, 1173
AccII CGCG 2 cut(s) 179, 863
AccIII TCCGGA 1 cut(s) 765
AclWI GGATC 3 cut(s) 203, 427, 1133
AcoI YGGCCR 2 cut(s) 313, 1214
AcsI RAATTY 2 cut(s) 857, 1383
AcvI CACGTG 2 cut(s) 415, 1288
AcyI GRCGYC 2 cut(s) 221, 1010
AfaI GTAC 5 cut(s) 70, 301, 609, 833, 1027
AfeI AGCGCT 1 cut(s) 88
AfiI CCNNNNNNNGG 1 cut(s) 1019
AflII CTTAAG 1 cut(s) 121
AflIII ACRYGT 1 cut(s) 412
AgeI ACCGGT 1 cut(s) 567
AgsI TTSAA 4 cut(s) 130, 162, 727, 1103
AjiI CACGTC 1 cut(s) 1069
AjnI CCWGG 1 cut(s) 1163
AleI CACNNNNGTG 1 cut(s) 336
AluBI AGCT 6 cut(s) 45, 126, 428, 928, 1362, 1426
AluI AGCT 6 cut(s) 45, 126, 428, 928, 1362, 1426
Alw26I GTCTC 1 cut(s) 104
AlwI GGATC 3 cut(s) 203, 427, 1133
AlwNI CAGNNNCTG 1 cut(s) 428
Aor13HI TCCGGA 1 cut(s) 765
Aor51HI AGCGCT 1 cut(s) 88
AoxI GGCC 2 cut(s) 313, 1214
ApeKI GCWGC 1 cut(s) 1295
ApoI RAATTY 2 cut(s) 857, 1383
ArsI GACNNNNNNTTYG 4 cut(s) 597, 629, 868, 900
AsiGI ACCGGT 1 cut(s) 567
AspLEI GCGC 6 cut(s) 89, 922, 1047, 1163, 1174, 1336
AsuC2I CCSGG 1 cut(s) 584
AsuHPI GGTGA 5 cut(s) 40, 67, 323, 542, 1270
AsuII TTCGAA 2 cut(s) 887, 1200
BaeI ACNNNNGTAYC 2 cut(s) 463, 496
BarI GAAGNNNNNNTAC 2 cut(s) 472, 504
BauI CACGAG 1 cut(s) 908
BbrPI CACGTG 2 cut(s) 415, 1288
BbsI GAAGAC 5 cut(s) 12, 265, 771, 797, 1271
BbvI GCAGC 1 cut(s) 1282
BccI CCATC 2 cut(s) 273, 683
BceAI ACGGC 5 cut(s) 300, 411, 894, 997, 1201
BciT130I CCWGG 1 cut(s) 1165
BclI TGATCA 1 cut(s) 1221
BcnI CCSGG 1 cut(s) 584
BcoDI GTCTC 1 cut(s) 104
BfaI CTAG 4 cut(s) 90, 446, 929, 1154
BfoI RGCGCY 3 cut(s) 90, 923, 1337
BfrI CTTAAG 1 cut(s) 121
BglII AGATCT 1 cut(s) 655
BisI GCNGC 6 cut(s) 180, 234, 600, 864, 1238, 1296
BlsI GCNGC 6 cut(s) 181, 235, 601, 865, 1239, 1297
BmcAI AGTACT 1 cut(s) 609
Bme1390I CCNGG 2 cut(s) 584, 1165
BmgBI CACGTC 1 cut(s) 1069
BmiI GGNNCC 1 cut(s) 870
BmrFI CCNGG 2 cut(s) 584, 1165
BmsI GCATC 2 cut(s) 475, 1148
BpiI GAAGAC 5 cut(s) 12, 265, 771, 797, 1271
BplI GAGNNNNNCTC 4 cut(s) 422, 454, 778, 810
Bpu14I TTCGAA 2 cut(s) 887, 1200
BpuEI CTTGAG 2 cut(s) 94, 1384
BpuMI CCSGG 1 cut(s) 584
Bsa29I ATCGAT 2 cut(s) 378, 483
BsaAI YACGTR 3 cut(s) 415, 479, 1288
BsaBI GATNNNNATC 2 cut(s) 36, 714
BsaHI GRCGYC 2 cut(s) 221, 1010
BsaWI WCCGGW 4 cut(s) 356, 567, 664, 765
BsaXI ACNNNNNCTCC 4 cut(s) 252, 282, 815, 845
Bsc4I CCNNNNNNNGG 1 cut(s) 1019
Bse118I RCCGGY 1 cut(s) 567
Bse1I ACTGG 2 cut(s) 221, 872
Bse8I GATNNNNATC 2 cut(s) 36, 714
BseAI TCCGGA 1 cut(s) 765
BseBI CCWGG 1 cut(s) 1165
BseCI ATCGAT 2 cut(s) 378, 483
BseGI GGATG 1 cut(s) 1163
BseJI GATNNNNATC 2 cut(s) 36, 714
BseLI CCNNNNNNNGG 1 cut(s) 1019
BseMII CTCAG 3 cut(s) 55, 420, 720
BseNI ACTGG 2 cut(s) 221, 872
BseRI GAGGAG 2 cut(s) 238, 497
BseX3I CGGCCG 1 cut(s) 313
BseXI GCAGC 1 cut(s) 1282
Bsh1236I CGCG 2 cut(s) 179, 863
Bsh1285I CGRYCG 3 cut(s) 67, 316, 382
BshFI GGCC 2 cut(s) 315, 1216
BshTI ACCGGT 1 cut(s) 567
BshVI ATCGAT 2 cut(s) 378, 483
BsiEI CGRYCG 3 cut(s) 67, 316, 382
BsiSI CCGG 8 cut(s) 357, 568, 584, 665, 766, 923, 936, 1241
BslI CCNNNNNNNGG 1 cut(s) 1019
BsmAI GTCTC 1 cut(s) 104
BsnI GGCC 2 cut(s) 315, 1216
Bsp119I TTCGAA 2 cut(s) 887, 1200
Bsp13I TCCGGA 1 cut(s) 765
BspANI GGCC 2 cut(s) 315, 1216
BspCNI CTCAG 3 cut(s) 54, 421, 719
BspDI ATCGAT 2 cut(s) 378, 483
BspEI TCCGGA 1 cut(s) 765
BspFNI CGCG 2 cut(s) 179, 863
BspLI GGNNCC 1 cut(s) 870
BspPI GGATC 3 cut(s) 203, 427, 1133
BspT104I TTCGAA 2 cut(s) 887, 1200
BspTI CTTAAG 1 cut(s) 121
BsrFI RCCGGY 1 cut(s) 567
BsrI ACTGG 2 cut(s) 221, 872
BssAI RCCGGY 1 cut(s) 567
BssNI GRCGYC 2 cut(s) 221, 1010
BssSI CACGAG 1 cut(s) 908
BssT1I CCWWGG 3 cut(s) 618, 637, 1107
Bst2BI CACGAG 1 cut(s) 908
Bst2UI CCWGG 1 cut(s) 1165
Bst4CI ACNGT 5 cut(s) 14, 68, 200, 530, 1128
Bst6I CTCTTC 2 cut(s) 837, 1142
BstACI GRCGYC 2 cut(s) 221, 1010
BstAFI CTTAAG 1 cut(s) 121
BstAPI GCANNNNNTGC 1 cut(s) 1348
BstBAI YACGTR 3 cut(s) 415, 479, 1288
BstBI TTCGAA 2 cut(s) 887, 1200
BstC8I GCNNGC 1 cut(s) 106
BstDEI CTNAG 3 cut(s) 41, 429, 706
BstDSI CCRYGG 3 cut(s) 177, 819, 1307
BstEII GGTNACC 1 cut(s) 570
BstF5I GGATG 1 cut(s) 1163
BstFNI CGCG 2 cut(s) 179, 863
BstH2I RGCGCY 3 cut(s) 90, 923, 1337
BstHHI GCGC 6 cut(s) 89, 922, 1047, 1163, 1174, 1336
BstMAI GTCTC 1 cut(s) 104
BstMCI CGRYCG 3 cut(s) 67, 316, 382
BstMWI GCNNNNNNNGC 4 cut(s) 860, 1169, 1348, 1374
BstNI CCWGG 1 cut(s) 1165
BstNSI RCATGY 1 cut(s) 1280
BstPI GGTNACC 1 cut(s) 570
BstSCI CCNGG 2 cut(s) 582, 1163
BstUI CGCG 2 cut(s) 179, 863
BstV1I GCAGC 1 cut(s) 1282
BstV2I GAAGAC 5 cut(s) 12, 265, 771, 797, 1271
BstX2I RGATCY 3 cut(s) 432, 655, 1138
BstXI CCANNNNNNTGG 1 cut(s) 638
BstYI RGATCY 3 cut(s) 432, 655, 1138
BstZI CGGCCG 1 cut(s) 313
Bsu15I ATCGAT 2 cut(s) 378, 483
BsuRI GGCC 2 cut(s) 315, 1216
BsuTUI ATCGAT 2 cut(s) 378, 483
BtgI CCRYGG 3 cut(s) 177, 819, 1307
BtrI CACGTC 1 cut(s) 1069
BtsCI GGATG 1 cut(s) 1163
BtsIMutI CAGTG 3 cut(s) 27, 214, 879
Cac8I GCNNGC 1 cut(s) 106
CaiI CAGNNNCTG 1 cut(s) 428
CfoI GCGC 6 cut(s) 89, 922, 1047, 1163, 1174, 1336
Cfr10I RCCGGY 1 cut(s) 567
Cfr42I CCGCGG 1 cut(s) 180
ClaI ATCGAT 2 cut(s) 378, 483
CseI GACGC 1 cut(s) 1018
Csp6I GTAC 5 cut(s) 69, 300, 608, 832, 1026
CspAI ACCGGT 1 cut(s) 567
CviAII CATG 3 cut(s) 700, 1190, 1277
CviQI GTAC 5 cut(s) 69, 300, 608, 832, 1026
DdeI CTNAG 3 cut(s) 41, 429, 706
DraI TTTAAA 2 cut(s) 280, 1018
EaeI YGGCCR 2 cut(s) 313, 1214
EagI CGGCCG 1 cut(s) 313
Eam1104I CTCTTC 2 cut(s) 837, 1142
EarI CTCTTC 2 cut(s) 837, 1142
EciI GGCGGA 1 cut(s) 881
EclXI CGGCCG 1 cut(s) 313
Eco130I CCWWGG 3 cut(s) 618, 637, 1107
Eco32I GATATC 1 cut(s) 1180
Eco47III AGCGCT 1 cut(s) 88
Eco52I CGGCCG 1 cut(s) 313
Eco72I CACGTG 2 cut(s) 415, 1288
Eco91I GGTNACC 1 cut(s) 570
EcoO65I GGTNACC 1 cut(s) 570
EcoRI GAATTC 1 cut(s) 857
EcoRII CCWGG 1 cut(s) 1163
EcoRV GATATC 1 cut(s) 1180
EcoT14I CCWWGG 3 cut(s) 618, 637, 1107
ErhI CCWWGG 3 cut(s) 618, 637, 1107
FaeI CATG 3 cut(s) 703, 1193, 1280
FatI CATG 3 cut(s) 699, 1189, 1276
FbaI TGATCA 1 cut(s) 1221
Fnu4HI GCNGC 6 cut(s) 180, 234, 600, 864, 1238, 1296
FokI GGATG 1 cut(s) 1170
Fsp4HI GCNGC 6 cut(s) 180, 234, 600, 864, 1238, 1296
FspBI CTAG 4 cut(s) 90, 446, 929, 1154
FspI TGCGCA 2 cut(s) 1046, 1173
GlaI GCGC 6 cut(s) 88, 921, 1046, 1162, 1173, 1335
GluI GCNGC 6 cut(s) 180, 234, 600, 864, 1238, 1296
HaeII RGCGCY 3 cut(s) 90, 923, 1337
HaeIII GGCC 2 cut(s) 315, 1216
HapII CCGG 8 cut(s) 357, 568, 584, 665, 766, 923, 936, 1241
HgaI GACGC 1 cut(s) 1018
HhaI GCGC 6 cut(s) 89, 922, 1047, 1163, 1174, 1336
Hin1I GRCGYC 2 cut(s) 221, 1010
Hin1II CATG 3 cut(s) 703, 1193, 1280
Hin6I GCGC 6 cut(s) 87, 920, 1045, 1161, 1172, 1334
HinP1I GCGC 6 cut(s) 87, 920, 1045, 1161, 1172, 1334
HindIII AAGCTT 2 cut(s) 124, 1360
HpaII CCGG 8 cut(s) 357, 568, 584, 665, 766, 923, 936, 1241
HphI GGTGA 5 cut(s) 40, 67, 323, 542, 1270
Hpy166II GTNNAC 2 cut(s) 554, 1077
Hpy188I TCNGA 9 cut(s) 230, 253, 290, 709, 752, 786, 1143, 1226, 1389
Hpy188III TCNNGA 9 cut(s) 35, 383, 653, 676, 683, 756, 766, 908, 1183
Hpy8I GTNNAC 2 cut(s) 554, 1077
Hpy99I CGWCG 7 cut(s) 14, 204, 257, 617, 762, 801, 1012
HpyAV CCTTC 4 cut(s) 168, 1085, 1196, 1264
HpyCH4III ACNGT 5 cut(s) 14, 68, 200, 530, 1128
HpyCH4IV ACGT 6 cut(s) 221, 414, 478, 1068, 1079, 1287
HpyF10VI GCNNNNNNNGC 4 cut(s) 860, 1169, 1348, 1374
HpyF3I CTNAG 3 cut(s) 41, 429, 706
HpySE526I ACGT 6 cut(s) 221, 414, 478, 1068, 1079, 1287
Hsp92I GRCGYC 2 cut(s) 221, 1010
Hsp92II CATG 3 cut(s) 703, 1193, 1280
HspAI GCGC 6 cut(s) 87, 920, 1045, 1161, 1172, 1334
Kpn2I TCCGGA 1 cut(s) 765
Ksp22I TGATCA 1 cut(s) 1221
KspI CCGCGG 1 cut(s) 180
LmnI GCTCC 3 cut(s) 552, 868, 925
Lsp1109I GCAGC 1 cut(s) 1282
LweI GCATC 2 cut(s) 475, 1148
MaeI CTAG 4 cut(s) 90, 446, 929, 1154
MaeII ACGT 6 cut(s) 221, 414, 478, 1068, 1079, 1287
MaeIII GTNAC 8 cut(s) 203, 272, 329, 570, 874, 1283, 1288, 1300
MflI RGATCY 3 cut(s) 432, 655, 1138
MluCI AATT 3 cut(s) 857, 1383, 1399
MlyI GAGTC 4 cut(s) 106, 132, 255, 787
MmeI TCCRAC 3 cut(s) 276, 313, 767
MroI TCCGGA 1 cut(s) 765
MseI TTAA 4 cut(s) 122, 279, 369, 1017
MslI CAYNNNNRTG 1 cut(s) 336
MspA1I CMGCKG 1 cut(s) 179
MspCI CTTAAG 1 cut(s) 121
MspI CCGG 8 cut(s) 357, 568, 584, 665, 766, 923, 936, 1241
MspR9I CCNGG 2 cut(s) 584, 1165
MvaI CCWGG 1 cut(s) 1165
MvnI CGCG 2 cut(s) 179, 863
MwoI GCNNNNNNNGC 4 cut(s) 860, 1169, 1348, 1374
NciI CCSGG 1 cut(s) 584
NlaIII CATG 3 cut(s) 703, 1193, 1280
NlaIV GGNNCC 1 cut(s) 870
NmeAIII GCCGAG 1 cut(s) 291
NmuCI GTSAC 5 cut(s) 272, 329, 874, 1283, 1288
NsbI TGCGCA 2 cut(s) 1046, 1173
NspI RCATGY 1 cut(s) 1280
NspV TTCGAA 2 cut(s) 887, 1200
OliI CACNNNNGTG 1 cut(s) 336
PcsI WCGNNNNNNNCGW 3 cut(s) 480, 782, 884
PfeI GAWTC 7 cut(s) 360, 591, 642, 679, 762, 1206, 1246
PinAI ACCGGT 1 cut(s) 567
PkrI GCNGC 6 cut(s) 181, 235, 601, 865, 1239, 1297
Ple19I CGATCG 1 cut(s) 382
PleI GAGTC 4 cut(s) 105, 132, 255, 787
PmaCI CACGTG 2 cut(s) 415, 1288
PmlI CACGTG 2 cut(s) 415, 1288
PpsI GAGTC 4 cut(s) 105, 132, 255, 787
Ppu21I YACGTR 3 cut(s) 415, 479, 1288
Psp6I CCWGG 1 cut(s) 1163
PspCI CACGTG 2 cut(s) 415, 1288
PspEI GGTNACC 1 cut(s) 570
PspGI CCWGG 1 cut(s) 1163
PspN4I GGNNCC 1 cut(s) 870
PstNI CAGNNNCTG 1 cut(s) 428
PsuI RGATCY 3 cut(s) 432, 655, 1138
PvuI CGATCG 1 cut(s) 382
RsaI GTAC 5 cut(s) 70, 301, 609, 833, 1027
RsaNI GTAC 5 cut(s) 69, 300, 608, 832, 1026
RseI CAYNNNNRTG 1 cut(s) 336
SacII CCGCGG 1 cut(s) 180
SaqAI TTAA 4 cut(s) 122, 279, 369, 1017
SatI GCNGC 6 cut(s) 180, 234, 600, 864, 1238, 1296
ScaI AGTACT 1 cut(s) 609
SchI GAGTC 4 cut(s) 106, 132, 255, 787
ScrFI CCNGG 2 cut(s) 584, 1165
SfaNI GCATC 2 cut(s) 475, 1148
Sfr303I CCGCGG 1 cut(s) 180
SfuI TTCGAA 2 cut(s) 887, 1200
SgrBI CCGCGG 1 cut(s) 180
SmiMI CAYNNNNRTG 1 cut(s) 336
SmlI CTYRAG 3 cut(s) 109, 121, 1363
SmoI CTYRAG 3 cut(s) 109, 121, 1363
Sse9I AATT 3 cut(s) 857, 1383, 1399
SspMI CTAG 4 cut(s) 90, 446, 929, 1154
StyD4I CCNGG 2 cut(s) 582, 1163
StyI CCWWGG 3 cut(s) 618, 637, 1107
TaaI ACNGT 5 cut(s) 14, 68, 200, 530, 1128
TaiI ACGT 6 cut(s) 224, 417, 481, 1071, 1082, 1290
TasI AATT 3 cut(s) 857, 1383, 1399
TatI WGTACW 1 cut(s) 607
TauI GCSGC 5 cut(s) 182, 236, 602, 866, 1240
TfiI GAWTC 7 cut(s) 360, 591, 642, 679, 762, 1206, 1246
Tru1I TTAA 4 cut(s) 122, 279, 369, 1017
Tru9I TTAA 4 cut(s) 122, 279, 369, 1017
TscAI CASTG 3 cut(s) 34, 221, 879
TseFI GTSAC 5 cut(s) 272, 329, 874, 1283, 1288
TseI GCWGC 1 cut(s) 1295
Tsp45I GTSAC 5 cut(s) 272, 329, 874, 1283, 1288
TspGWI ACGGA 9 cut(s) 260, 270, 326, 539, 836, 957, 963, 1017, 1324
TspRI CASTG 3 cut(s) 34, 221, 879
Vha464I CTTAAG 1 cut(s) 121
XapI RAATTY 2 cut(s) 857, 1383
XceI RCATGY 1 cut(s) 1280
XspI CTAG 4 cut(s) 90, 446, 929, 1154
ZraI GACGTC 1 cut(s) 222
ZrmI AGTACT 1 cut(s) 609
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.