Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0016596

Physical Location & Seq

Genomic Coordinates Forward (+)

22187399 .. 22189740

Gene Structure 2342 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG192000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1677 bp

ATGCAGATGCTCAGCCGGGGTCAACCAAACACCTTATTTAATCCTCCTCCAGGCCCTTCGTACCTTCCCCTCTTCCTCTCTTCCTCTCTCTCATCCTTTATAAGCCTCCATACCAATCCAAAACGAACTTGCATTTGCTTTTCTAGTTTTCTCCAACATATATACTACAACTCTCTAGCTCTCTTGTATGCACCAGCCATGGAAGTCGACTTGGACTGCCCGTTGCCTATAGCCGACTACGGCGACCTCGACTTCAGCTTCACCTCCTGCACAACCGACCGCACCTACGTCTCCTCCTCCAGCGCCCGCACCAGCTTGGCCCGCAGCAGCCTCACTCTCAGCTTCAACGATCGCGACTCACGCCTATCCTCCGCCACCGTAACAACCACCAACGTCCCCGCAGTCCTCCACCACCGCAAATGGGACCCGCATTGGACGGCGATAAAAGCGGCCACCAACCTGTCATCCGACAAGGCACTCCACATCCGACACCTCAAGCTCCTCCGCCGCCTCGGCTCCGGCAACCTCGGACGCGTCTTCCTCTGCCGCCTCCGCGACTACAACCCCGACGACTCCTTGTTCGCCCTCAAGGTCGTTGACCATGCGGCCATCTCGCCGAAGAAGCAGGCCCACGTGGAGACCGAGGCCCAGATCCTCGCCATGCTCGACCACCCTTTCCTCCCTACGCTCTACGCCCGCATCGACGTCTCCCACTACACGTGTCTCCTCATCGACTACTGCCCCAACGGCGACCTCCAAACCCTCCTCATCAAACAGCCCCAGCACCGCCTCCCGGTCCGGACCGCCCGCTTCTTCGCCGCCGAGGTCCTCGCCTCGCTCGAGTACCTCCACGCGCTCGGGATCGTCTACCGCGACCTCAAGCCCGAGAACGTCCTCCTCCGCGAGGACGGCCACATCATGCTCTCCGACTTCGACCTCTGCTTCAAGTCCGACGTCGTTCCGACCTTCGAGCGCCGCCGCGTCGTGAAGCTCCGGCCCGCCCGGAAAACAAGGAGATCCGCCGCCAACTGCTTCGGATCGAGCGAGCGAGAGCCAAAGGAGGAGGAGGAGGAAATGGAGGCGGAGTTCGTGGCGGAGCCAACGACGGCGTTTTCGATGTCGTGCGTGGGCACCCACGAGTATTTGGCGCCCGAACTCGTCGGCGGTTACGGTCACGGTAACGGCGTCGATTGGTGGGCGTTCGGGATTTTCATCTTCGAGCTGCTGTACGGGACGACGCCGTTTAAGGGCGGGAGTAAGGAGAGCACGCTGCGGAATATAGCGTTGGCCGACGGCGTTAGGTTCCACGTGGCGGAGGGAGAGGAGGAGGGGATGAAGGAGGCGAGGGATTTGATAGAGGGACTGCTGGTGAGGGACCCGAAGAAAAGGCTAGGGTGCGCCAAGGGGGCTACTGAGATTAAACGGCACCCGTTTTTTCATGGGATTAATTGGGCCTTGCTCAAGAGTTACAGGCCGCCGGATGTGTATGGGCTTAAAAAGAAGCCCAGTAAGACTATTGTCGTCCCGGCTGGGGTTGCGCTTTCGGCCCATAAGAGGCGGCGGTGGTGGTGGAAGGGACTTGGTCAGCTGGTGAAGACTAGAAGTAACAAGAAGAACAACCAGAGTAACAGTAATTACTATCATTACGTCAGTGATAAAATGGTCAGGAAAAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0009790 GO:0009791 GO:0009793 GO:0009914 GO:0009926 GO:0009987 GO:0010154 GO:0010817 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0023052 GO:0032501 GO:0032502 GO:0035556 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048316 GO:0048366 GO:0048367 GO:0048608 GO:0048731 GO:0048825 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0060918 GO:0061458 GO:0065007 GO:0065008 GO:0071704 GO:0071944 GO:0099402 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

558

Amino Acids

62.99

Weight (kDa)

9.2

Isoelectric Point (pI)

49.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PK_Tyr_Ser-Thr	PF07714	165 - 315	2.1e-21	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	167 - 315	4.4e-32	Protein kinase domain
Pkinase	PF00069	372 - 479	1.1e-18	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0016596)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53700 AT3G14370
fragaria_vesca	FvH4_3g16190
malus_domestica	MD05G1211600.v1.1
prunus_persica	Prupe.4G145600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0027261
rosa_laevigata	RLG00000033006
rosa_multiflora	Rmu_co8412521.1_g000001 Rmu_sc0001503.1_g000005
rosa_rugosa	Rorug05G0097900
rosa_samantha	Rh5AG192000 Rh5BG189700 Rh5CG210300 Rh5DG191900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	101
AatII	GACGTC	2 cut(s)	708, 957
AccB1I	GGYRCC	3 cut(s)	1130, 1147, 1425
AccI	GTMKAC	2 cut(s)	207, 867
AccII	CGCG	7 cut(s)	354, 534, 555, 854, 873, 903, 981
AccIII	TCCGGA	1 cut(s)	798
AclWI	GGATC	4 cut(s)	646, 869, 1011, 1045
AcoI	YGGCCR	4 cut(s)	450, 606, 910, 1287
AcuI	CTGAAG	1 cut(s)	238
AcvI	CACGTG	3 cut(s)	634, 720, 1309
AcyI	GRCGYC	5 cut(s)	705, 954, 1148, 1185, 1238
AfaI	GTAC	3 cut(s)	62, 845, 1229
AfiI	CCNNNNNNNGG	8 cut(s)	50, 421, 793, 904, 1247, 1312, 1531, 1554
AflIII	ACRYGT	3 cut(s)	532, 717, 719
AgsI	TTSAA	2 cut(s)	346, 946
AjnI	CCWGG	1 cut(s)	49
AjuI	GAANNNNNNNTTGG	2 cut(s)	1268, 1300
AloI	GAACNNNNNNTCC	2 cut(s)	1070, 1102
AluBI	AGCT	8 cut(s)	179, 258, 315, 342, 499, 991, 1222, 1588
AluI	AGCT	8 cut(s)	179, 258, 315, 342, 499, 991, 1222, 1588
Alw21I	GWGCWC	1 cut(s)	1268
Alw26I	GTCTC	4 cut(s)	295, 632, 712, 728
AlwI	GGATC	4 cut(s)	646, 869, 1011, 1045
Ama87I	CYCGRG	3 cut(s)	839, 857, 884
Aor13HI	TCCGGA	1 cut(s)	798
ApeKI	GCWGC	4 cut(s)	324, 327, 1222, 1270
ArsI	GACNNNNNNTTYG	4 cut(s)	563, 595, 1096, 1128
AseI	ATTAAT	1 cut(s)	1446
AspLEI	GCGC	6 cut(s)	305, 856, 975, 1150, 1400, 1540
AsuC2I	CCSGG	4 cut(s)	17, 794, 1003, 1526
AsuHPI	GGTGA	3 cut(s)	253, 1381, 1603
AvaI	CYCGRG	3 cut(s)	839, 857, 884
AvaII	GGWCC	5 cut(s)	424, 796, 801, 826, 1375
BaeGI	GKGCMC	1 cut(s)	1133
BanI	GGYRCC	3 cut(s)	1130, 1147, 1425
BauI	CACGAG	1 cut(s)	1136
BbrPI	CACGTG	3 cut(s)	634, 720, 1309
BbsI	GAAGAC	2 cut(s)	529, 1601
Bbv12I	GWGCWC	1 cut(s)	1268
BbvI	GCAGC	4 cut(s)	336, 339, 1209, 1257
BccI	CCATC	1 cut(s)	617
BceAI	ACGGC	9 cut(s)	256, 453, 763, 925, 1122, 1198, 1225, 1309, 1439
BciT130I	CCWGG	1 cut(s)	51
BcnI	CCSGG	4 cut(s)	17, 794, 1003, 1526
BcoDI	GTCTC	4 cut(s)	295, 632, 712, 728
BfaI	CTAG	4 cut(s)	144, 176, 1391, 1599
BfmI	CTRYAG	1 cut(s)	228
BfoI	RGCGCY	3 cut(s)	306, 976, 1151
BglI	GCCNNNNNGGC	3 cut(s)	513, 747, 1406
BlpI	GCTNAGC	1 cut(s)	11
Bme1390I	CCNGG	5 cut(s)	17, 51, 794, 1003, 1526
Bme18I	GGWCC	5 cut(s)	424, 796, 801, 826, 1375
BmeT110I	CYCGRG	3 cut(s)	839, 857, 884
BmrFI	CCNGG	5 cut(s)	17, 51, 794, 1003, 1526
BmrI	ACTGGG	1 cut(s)	1500
BmsI	GCATC	1 cut(s)	708
BmuI	ACTGGG	1 cut(s)	1500
BoxI	GACNNNNGTC	1 cut(s)	1517
BpiI	GAAGAC	2 cut(s)	529, 1601
BpmI	CTGGAG	2 cut(s)	33, 283
Bpu1102I	GCTNAGC	1 cut(s)	11
BpuEI	CTTGAG	4 cut(s)	479, 572, 863, 1445
BpuMI	CCSGG	4 cut(s)	17, 794, 1003, 1526
BsaAI	YACGTR	3 cut(s)	634, 720, 1309
BsaBI	GATNNNNATC	1 cut(s)	1211
BsaHI	GRCGYC	5 cut(s)	705, 954, 1148, 1185, 1238
BsaI	GGTCTC	1 cut(s)	632
BsaJI	CCNNGG	7 cut(s)	16, 198, 511, 526, 642, 822, 1401
BsaWI	WCCGGW	1 cut(s)	798
BsaXI	ACNNNNNCTCC	4 cut(s)	278, 308, 1070, 1100
Bsc4I	CCNNNNNNNGG	8 cut(s)	50, 421, 793, 904, 1247, 1312, 1531, 1554
Bse1I	ACTGG	1 cut(s)	1506
Bse8I	GATNNNNATC	1 cut(s)	1211
BseAI	TCCGGA	1 cut(s)	798
BseBI	CCWGG	1 cut(s)	51
BseDI	CCNNGG	7 cut(s)	16, 198, 511, 526, 642, 822, 1401
BseGI	GGATG	5 cut(s)	92, 464, 483, 1338, 1486
BseJI	GATNNNNATC	1 cut(s)	1211
BseLI	CCNNNNNNNGG	8 cut(s)	50, 421, 793, 904, 1247, 1312, 1531, 1554
BseMII	CTCAG	3 cut(s)	25, 352, 1404
BseNI	ACTGG	1 cut(s)	1506
BseSI	GKGCMC	1 cut(s)	1133
BseXI	GCAGC	4 cut(s)	336, 339, 1209, 1257
BseYI	CCCAGC	2 cut(s)	780, 1529
BsgI	GTGCAG	1 cut(s)	253
Bsh1236I	CGCG	7 cut(s)	354, 534, 555, 854, 873, 903, 981
Bsh1285I	CGRYCG	2 cut(s)	280, 352
BshNI	GGYRCC	3 cut(s)	1130, 1147, 1425
BsiEI	CGRYCG	2 cut(s)	280, 352
BsiHKAI	GWGCWC	1 cut(s)	1268
BsiHKCI	CYCGRG	3 cut(s)	839, 857, 884
BsiSI	CCGG	8 cut(s)	16, 519, 794, 799, 994, 1003, 1478, 1526
BslFI	GGGAC	7 cut(s)	380, 437, 1246, 1374, 1388, 1508, 1590
BslI	CCNNNNNNNGG	8 cut(s)	50, 421, 793, 904, 1247, 1312, 1531, 1554
BsmAI	GTCTC	4 cut(s)	295, 632, 712, 728
BsmBI	CGTCTC	2 cut(s)	295, 712
BsmFI	GGGAC	7 cut(s)	380, 437, 1246, 1374, 1388, 1508, 1590
Bso31I	GGTCTC	1 cut(s)	632
BsoBI	CYCGRG	3 cut(s)	839, 857, 884
Bsp1286I	GDGCHC	2 cut(s)	1133, 1268
Bsp13I	TCCGGA	1 cut(s)	798
Bsp143I	GATC	5 cut(s)	349, 651, 861, 1016, 1037
Bsp1720I	GCTNAGC	1 cut(s)	11
Bsp19I	CCATGG	1 cut(s)	198
Bsp68I	TCGCGA	1 cut(s)	354
BspCNI	CTCAG	3 cut(s)	24, 351, 1405
BspEI	TCCGGA	1 cut(s)	798
BspFNI	CGCG	7 cut(s)	354, 534, 555, 854, 873, 903, 981
BspPI	GGATC	4 cut(s)	646, 869, 1011, 1045
BspT107I	GGYRCC	3 cut(s)	1130, 1147, 1425
BspTNI	GGTCTC	1 cut(s)	632
BsrI	ACTGG	1 cut(s)	1506
BssECI	CCNNGG	7 cut(s)	16, 198, 511, 526, 642, 822, 1401
BssMI	GATC	5 cut(s)	349, 651, 861, 1016, 1037
BssNI	GRCGYC	5 cut(s)	705, 954, 1148, 1185, 1238
BssSI	CACGAG	1 cut(s)	1136
BssT1I	CCWWGG	2 cut(s)	198, 1401
Bst2BI	CACGAG	1 cut(s)	1136
Bst2UI	CCWGG	1 cut(s)	51
Bst4CI	ACNGT	4 cut(s)	379, 1172, 1178, 1631
Bst6I	CTCTTC	2 cut(s)	77, 85
BstACI	GRCGYC	5 cut(s)	705, 954, 1148, 1185, 1238
BstBAI	YACGTR	3 cut(s)	634, 720, 1309
BstC8I	GCNNGC	8 cut(s)	307, 322, 627, 697, 808, 999, 1046, 1268
BstDEI	CTNAG	3 cut(s)	11, 338, 1413
BstDSI	CCRYGG	1 cut(s)	198
BstENI	CCTNNNNNAGG	2 cut(s)	48, 902
BstF5I	GGATG	5 cut(s)	92, 464, 483, 1338, 1486
BstFNI	CGCG	7 cut(s)	354, 534, 555, 854, 873, 903, 981
BstH2I	RGCGCY	3 cut(s)	306, 976, 1151
BstHHI	GCGC	6 cut(s)	305, 856, 975, 1150, 1400, 1540
BstKTI	GATC	5 cut(s)	352, 654, 864, 1019, 1040
BstMAI	GTCTC	4 cut(s)	295, 632, 712, 728
BstMBI	GATC	5 cut(s)	349, 651, 861, 1016, 1037
BstMCI	CGRYCG	2 cut(s)	280, 352
BstNI	CCWGG	1 cut(s)	51
BstPAI	GACNNNNGTC	1 cut(s)	1517
BstSCI	CCNGG	5 cut(s)	15, 49, 792, 1001, 1524
BstSFI	CTRYAG	1 cut(s)	228
BstSLI	GKGCMC	1 cut(s)	1133
BstUI	CGCG	7 cut(s)	354, 534, 555, 854, 873, 903, 981
BstV1I	GCAGC	4 cut(s)	336, 339, 1209, 1257
BstV2I	GAAGAC	2 cut(s)	529, 1601
BstX2I	RGATCY	2 cut(s)	651, 1016
BstYI	RGATCY	2 cut(s)	651, 1016
BtgI	CCRYGG	1 cut(s)	198
BtsCI	GGATG	5 cut(s)	92, 464, 483, 1338, 1486
BtsIMutI	CAGTG	1 cut(s)	1657
BtuMI	TCGCGA	1 cut(s)	354
Cac8I	GCNNGC	8 cut(s)	307, 322, 627, 697, 808, 999, 1046, 1268
CfoI	GCGC	6 cut(s)	305, 856, 975, 1150, 1400, 1540
CpoI	CGGWCCG	2 cut(s)	796, 801
CseI	GACGC	5 cut(s)	523, 540, 970, 1174, 1246
Csp6I	GTAC	3 cut(s)	61, 844, 1228
CspI	CGGWCCG	2 cut(s)	796, 801
CviAII	CATG	5 cut(s)	199, 602, 661, 919, 1439
CviQI	GTAC	3 cut(s)	61, 844, 1228
DdeI	CTNAG	3 cut(s)	11, 338, 1413
DinI	GGCGCC	1 cut(s)	1149
DpnI	GATC	5 cut(s)	351, 653, 863, 1018, 1039
DpnII	GATC	5 cut(s)	349, 651, 861, 1016, 1037
EaeI	YGGCCR	4 cut(s)	450, 606, 910, 1287
Eam1104I	CTCTTC	2 cut(s)	77, 85
EarI	CTCTTC	2 cut(s)	77, 85
EciI	GGCGGA	6 cut(s)	361, 494, 1009, 1097, 1109, 1328
Eco130I	CCWWGG	2 cut(s)	198, 1401
Eco31I	GGTCTC	1 cut(s)	632
Eco47I	GGWCC	5 cut(s)	424, 796, 801, 826, 1375
Eco57I	CTGAAG	1 cut(s)	238
Eco72I	CACGTG	3 cut(s)	634, 720, 1309
Eco88I	CYCGRG	3 cut(s)	839, 857, 884
EcoNI	CCTNNNNNAGG	2 cut(s)	48, 902
EcoO109I	RGGNCCY	4 cut(s)	53, 424, 826, 1375
EcoRII	CCWGG	1 cut(s)	49
EcoT14I	CCWWGG	2 cut(s)	198, 1401
EgeI	GGCGCC	1 cut(s)	1149
EheI	GGCGCC	1 cut(s)	1149
ErhI	CCWWGG	2 cut(s)	198, 1401
Esp3I	CGTCTC	2 cut(s)	295, 712
FaeI	CATG	5 cut(s)	202, 605, 664, 922, 1442
FaqI	GGGAC	7 cut(s)	380, 437, 1246, 1374, 1388, 1508, 1590
FatI	CATG	5 cut(s)	198, 601, 660, 918, 1438
FauI	CCCGC	8 cut(s)	314, 329, 406, 435, 704, 815, 1006, 1244
FblI	GTMKAC	2 cut(s)	207, 867
FokI	GGATG	5 cut(s)	79, 451, 470, 1345, 1493
FspBI	CTAG	4 cut(s)	144, 176, 1391, 1599
GlaI	GCGC	6 cut(s)	304, 855, 974, 1149, 1399, 1539
GsaI	CCCAGC	2 cut(s)	784, 1533
GsuI	CTGGAG	2 cut(s)	33, 283
HaeII	RGCGCY	3 cut(s)	306, 976, 1151
HapII	CCGG	8 cut(s)	16, 519, 794, 799, 994, 1003, 1478, 1526
HgaI	GACGC	5 cut(s)	523, 540, 970, 1174, 1246
HhaI	GCGC	6 cut(s)	305, 856, 975, 1150, 1400, 1540
Hin1I	GRCGYC	5 cut(s)	705, 954, 1148, 1185, 1238
Hin1II	CATG	5 cut(s)	202, 605, 664, 922, 1442
Hin6I	GCGC	6 cut(s)	303, 854, 973, 1148, 1398, 1538
HinP1I	GCGC	6 cut(s)	303, 854, 973, 1148, 1398, 1538
HincII	GTYRAC	3 cut(s)	23, 208, 598
HindII	GTYRAC	3 cut(s)	23, 208, 598
HinfI	GANTC	2 cut(s)	356, 572
HpaII	CCGG	8 cut(s)	16, 519, 794, 799, 994, 1003, 1478, 1526
HphI	GGTGA	3 cut(s)	253, 1381, 1603
Hpy166II	GTNNAC	4 cut(s)	23, 208, 598, 868
Hpy188I	TCNGA	7 cut(s)	469, 488, 530, 928, 952, 963, 1037
Hpy188III	TCNNGA	7 cut(s)	353, 799, 859, 985, 1204, 1462, 1666
Hpy8I	GTNNAC	4 cut(s)	23, 208, 598, 868
HpyAV	CCTTC	5 cut(s)	66, 74, 976, 1330, 1567
HpyCH4III	ACNGT	4 cut(s)	379, 1172, 1178, 1631
HpyCH4IV	ACGT	9 cut(s)	288, 393, 633, 705, 719, 891, 954, 1308, 1647
HpyCH4V	TGCA	4 cut(s)	4, 132, 191, 270
HpyF3I	CTNAG	3 cut(s)	11, 338, 1413
HpySE526I	ACGT	9 cut(s)	288, 393, 633, 705, 719, 891, 954, 1308, 1647
Hsp92I	GRCGYC	5 cut(s)	705, 954, 1148, 1185, 1238
Hsp92II	CATG	5 cut(s)	202, 605, 664, 922, 1442
HspAI	GCGC	6 cut(s)	303, 854, 973, 1148, 1398, 1538
KasI	GGCGCC	1 cut(s)	1147
KflI	GGGWCCC	2 cut(s)	424, 1375
Kpn2I	TCCGGA	1 cut(s)	798
Kzo9I	GATC	5 cut(s)	349, 651, 861, 1016, 1037
LmnI	GCTCC	4 cut(s)	504, 521, 996, 1096
Lsp1109I	GCAGC	4 cut(s)	336, 339, 1209, 1257
LweI	GCATC	1 cut(s)	708
MaeI	CTAG	4 cut(s)	144, 176, 1391, 1599
MaeII	ACGT	9 cut(s)	288, 393, 633, 705, 719, 891, 954, 1308, 1647
MaeIII	GTNAC	7 cut(s)	379, 1166, 1172, 1178, 1466, 1604, 1625
MalI	GATC	5 cut(s)	351, 653, 863, 1018, 1039
MboI	GATC	5 cut(s)	349, 651, 861, 1016, 1037
MboII	GAAGA	9 cut(s)	64, 72, 529, 631, 805, 1207, 1393, 1606, 1624
MflI	RGATCY	2 cut(s)	651, 1016
MhlI	GDGCHC	2 cut(s)	1133, 1268
MluCI	AATT	2 cut(s)	1447, 1633
MluI	ACGCGT	1 cut(s)	532
Mly113I	GGCGCC	1 cut(s)	1148
MlyI	GAGTC	2 cut(s)	350, 566
MmeI	TCCRAC	6 cut(s)	178, 492, 511, 951, 975, 986
MroI	TCCGGA	1 cut(s)	798
MseI	TTAA	5 cut(s)	39, 1245, 1419, 1446, 1494
MspA1I	CMGCKG	1 cut(s)	1588
MspI	CCGG	8 cut(s)	16, 519, 794, 799, 994, 1003, 1478, 1526
MspR9I	CCNGG	5 cut(s)	17, 51, 794, 1003, 1526
MvaI	CCWGG	1 cut(s)	51
MvnI	CGCG	7 cut(s)	354, 534, 555, 854, 873, 903, 981
NarI	GGCGCC	1 cut(s)	1148
NciI	CCSGG	4 cut(s)	17, 794, 1003, 1526
NcoI	CCATGG	1 cut(s)	198
NdeII	GATC	5 cut(s)	349, 651, 861, 1016, 1037
NlaIII	CATG	5 cut(s)	202, 605, 664, 922, 1442
NmeAIII	GCCGAG	2 cut(s)	492, 847
NmuCI	GTSAC	1 cut(s)	1172
NruI	TCGCGA	1 cut(s)	354
PaeR7I	CTCGAG	1 cut(s)	839
PcsI	WCGNNNNNNNCGW	9 cut(s)	246, 639, 663, 699, 837, 870, 1041, 1112, 1182
PflFI	GACNNNGTC	1 cut(s)	1581
Ple19I	CGATCG	1 cut(s)	352
PleI	GAGTC	2 cut(s)	350, 566
PluTI	GGCGCC	1 cut(s)	1151
PmaCI	CACGTG	3 cut(s)	634, 720, 1309
PmlI	CACGTG	3 cut(s)	634, 720, 1309
PpsI	GAGTC	2 cut(s)	350, 566
Ppu21I	YACGTR	3 cut(s)	634, 720, 1309
PpuMI	RGGWCCY	3 cut(s)	424, 826, 1375
PshAI	GACNNNNGTC	1 cut(s)	1517
PshBI	ATTAAT	1 cut(s)	1446
PsiI	TTATAA	1 cut(s)	101
Psp5II	RGGWCCY	3 cut(s)	424, 826, 1375
Psp6I	CCWGG	1 cut(s)	49
PspCI	CACGTG	3 cut(s)	634, 720, 1309
PspFI	CCCAGC	2 cut(s)	780, 1529
PspGI	CCWGG	1 cut(s)	49
PspPPI	RGGWCCY	3 cut(s)	424, 826, 1375
PspXI	VCTCGAGB	1 cut(s)	839
PsuI	RGATCY	2 cut(s)	651, 1016
PsyI	GACNNNGTC	1 cut(s)	1581
PvuI	CGATCG	1 cut(s)	352
PvuII	CAGCTG	1 cut(s)	1588
RruI	TCGCGA	1 cut(s)	354
RsaI	GTAC	3 cut(s)	62, 845, 1229
RsaNI	GTAC	3 cut(s)	61, 844, 1228
Rsr2I	CGGWCCG	2 cut(s)	796, 801
RsrII	CGGWCCG	2 cut(s)	796, 801
SalI	GTCGAC	1 cut(s)	206
SaqAI	TTAA	5 cut(s)	39, 1245, 1419, 1446, 1494
Sau3AI	GATC	5 cut(s)	349, 651, 861, 1016, 1037
SchI	GAGTC	2 cut(s)	350, 566
ScrFI	CCNGG	5 cut(s)	17, 51, 794, 1003, 1526
SduI	GDGCHC	2 cut(s)	1133, 1268
SfaNI	GCATC	1 cut(s)	708
SfcI	CTRYAG	1 cut(s)	228
SfoI	GGCGCC	1 cut(s)	1149
Sfr274I	CTCGAG	1 cut(s)	839
SinI	GGWCC	5 cut(s)	424, 796, 801, 826, 1375
SlaI	CTCGAG	1 cut(s)	839
SmlI	CTYRAG	5 cut(s)	494, 587, 839, 878, 1460
SmoI	CTYRAG	5 cut(s)	494, 587, 839, 878, 1460
Sse9I	AATT	2 cut(s)	1447, 1633
SspDI	GGCGCC	1 cut(s)	1147
SspMI	CTAG	4 cut(s)	144, 176, 1391, 1599
StyD4I	CCNGG	5 cut(s)	15, 49, 792, 1001, 1524
StyI	CCWWGG	2 cut(s)	198, 1401
TaaI	ACNGT	4 cut(s)	379, 1172, 1178, 1631
TaiI	ACGT	9 cut(s)	291, 396, 636, 708, 722, 894, 957, 1311, 1650
TaqII	GACCGA	1 cut(s)	656
TasI	AATT	2 cut(s)	1447, 1633
Tru1I	TTAA	5 cut(s)	39, 1245, 1419, 1446, 1494
Tru9I	TTAA	5 cut(s)	39, 1245, 1419, 1446, 1494
TscAI	CASTG	1 cut(s)	1657
TseFI	GTSAC	1 cut(s)	1172
TseI	GCWGC	4 cut(s)	324, 327, 1222, 1270
Tsp45I	GTSAC	1 cut(s)	1172
TspDTI	ATGAA	3 cut(s)	1201, 1349, 1427
TspRI	CASTG	1 cut(s)	1657
Tth111I	GACNNNGTC	1 cut(s)	1581
VpaK11BI	GGWCC	5 cut(s)	424, 796, 801, 826, 1375
VspI	ATTAAT	1 cut(s)	1446
XagI	CCTNNNNNAGG	2 cut(s)	48, 902
XhoI	CTCGAG	1 cut(s)	839
XmiI	GTMKAC	2 cut(s)	207, 867
XspI	CTAG	4 cut(s)	144, 176, 1391, 1599
ZraI	GACGTC	2 cut(s)	706, 955

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.