AT1G68877

No description available

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
25893305 .. 25893515
211 bp
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UTR
Exon/CDS
Intron
AT1G68877.1

Sequence Viewer

Length: 189 bp
ATGATGGGCATAATGAGCATTCAAACGGCGATGGATCTTATCGTCGCCGGTGTCTCTCTAATGATCGGATTTGGATTCTTTGCTCTCATTGCCTCTGTCCTCTGCTCCGTCGCTTTCTTCCACCACGTCAAAGCCGCAACTCCCATCTCCACCGCTTTAACTTCTCACCGGAGATATATAGATTCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

62

Amino Acids

6.65

Weight (kDa)

8.02

Isoelectric Point (pI)

24.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0023917)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G68877
malus_domestica MD13G1053500.v1.1
prunus_persica Prupe.1G298600_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 135, 153
AclWI GGATC 1 cut(s) 42
AgsI TTSAA 1 cut(s) 23
AjiI CACGTC 1 cut(s) 127
Alw26I GTCTC 1 cut(s) 58
AlwI GGATC 1 cut(s) 42
AsuHPI GGTGA 1 cut(s) 158
BccI CCATC 2 cut(s) 25, 152
BceAI ACGGC 1 cut(s) 42
BcoDI GTCTC 1 cut(s) 58
BisI GCNGC 1 cut(s) 135
BlsI GCNGC 1 cut(s) 136
BmgBI CACGTC 1 cut(s) 127
BsaWI WCCGGW 1 cut(s) 168
Bse118I RCCGGY 1 cut(s) 47
Bse3DI GCAATG 1 cut(s) 87
BseMI GCAATG 1 cut(s) 87
BsiSI CCGG 2 cut(s) 48, 169
BsmAI GTCTC 1 cut(s) 58
BsmI GAATGC 1 cut(s) 18
Bsp143I GATC 2 cut(s) 34, 63
BspACI CCGC 2 cut(s) 135, 153
BspPI GGATC 1 cut(s) 42
BsrDI GCAATG 1 cut(s) 87
BsrFI RCCGGY 1 cut(s) 47
BssAI RCCGGY 1 cut(s) 47
BssMI GATC 2 cut(s) 34, 63
BstKTI GATC 2 cut(s) 37, 66
BstMAI GTCTC 1 cut(s) 58
BstMBI GATC 2 cut(s) 34, 63
BstMWI GCNNNNNNNGC 2 cut(s) 15, 89
BstX2I RGATCY 1 cut(s) 34
BstYI RGATCY 1 cut(s) 34
BtgZI GCGATG 1 cut(s) 44
BtrI CACGTC 1 cut(s) 127
Cfr10I RCCGGY 1 cut(s) 47
CviJI RGCY 1 cut(s) 134
CviKI_1 RGCY 1 cut(s) 134
DpnI GATC 2 cut(s) 36, 65
DpnII GATC 2 cut(s) 34, 63
FaiI YATR 3 cut(s) 11, 177, 179
Fnu4HI GCNGC 1 cut(s) 135
Fsp4HI GCNGC 1 cut(s) 135
GluI GCNGC 1 cut(s) 135
HapII CCGG 2 cut(s) 48, 169
HinfI GANTC 2 cut(s) 75, 182
HpaII CCGG 2 cut(s) 48, 169
HphI GGTGA 1 cut(s) 158
Hpy188I TCNGA 1 cut(s) 68
Hpy99I CGWCG 2 cut(s) 47, 113
HpyCH4IV ACGT 1 cut(s) 126
HpyF10VI GCNNNNNNNGC 2 cut(s) 15, 89
HpySE526I ACGT 1 cut(s) 126
Kzo9I GATC 2 cut(s) 34, 63
LmnI GCTCC 1 cut(s) 110
LpnPI CCDG 2 cut(s) 61, 182
MaeII ACGT 1 cut(s) 126
MalI GATC 2 cut(s) 36, 65
MboI GATC 2 cut(s) 34, 63
MboII GAAGA 1 cut(s) 109
MflI RGATCY 1 cut(s) 34
MnlI CCTC 2 cut(s) 103, 110
MseI TTAA 1 cut(s) 158
MspI CCGG 2 cut(s) 48, 169
Mva1269I GAATGC 1 cut(s) 18
MwoI GCNNNNNNNGC 2 cut(s) 15, 89
NdeII GATC 2 cut(s) 34, 63
PctI GAATGC 1 cut(s) 18
PfeI GAWTC 2 cut(s) 75, 182
PkrI GCNGC 1 cut(s) 136
PsuI RGATCY 1 cut(s) 34
SaqAI TTAA 1 cut(s) 158
SatI GCNGC 1 cut(s) 135
Sau3AI GATC 2 cut(s) 34, 63
SetI ASST 1 cut(s) 129
SgeI CNNG 3 cut(s) 60, 137, 181
SgrAI CRCCGGYG 1 cut(s) 47
SsiI CCGC 2 cut(s) 135, 153
TaiI ACGT 1 cut(s) 129
TauI GCSGC 1 cut(s) 137
TfiI GAWTC 2 cut(s) 75, 182
Tru1I TTAA 1 cut(s) 158
Tru9I TTAA 1 cut(s) 158
TspGWI ACGGA 1 cut(s) 97
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.