Prupe.1G298600_v2.0.a1
TCP Family

Belongs to the chaperonin (HSP60) family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
29423598 .. 29424101
504 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G298600.1

Sequence Viewer

Length: 150 bp
ATGATGTTCTTGATGGGTTTGAGCATCCAGAGCCTGTTGGATTTGGCGGTGGCAGGGATTTCTCTGATGATCGTTTTGGGAATTTTTGCGTTTATTACTTCTATTCTTTGCTCTGCTGCTTTCTTGCAAACCGCCAAGGACGTATCTTGA

Protein Analysis

50

Amino Acids

5.17

Weight (kDa)

4.21

Isoelectric Point (pI)

23.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0023917)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G68877
malus_domestica MD13G1053500.v1.1
prunus_persica Prupe.1G298600_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 47, 132
AcsI RAATTY 1 cut(s) 81
AlwNI CAGNNNCTG 1 cut(s) 34
ApeKI GCWGC 1 cut(s) 116
ApoI RAATTY 1 cut(s) 81
BbvI GCAGC 1 cut(s) 103
BccI CCATC 1 cut(s) 7
BisI GCNGC 1 cut(s) 117
BlsI GCNGC 1 cut(s) 118
BmsI GCATC 1 cut(s) 33
BsaJI CCNNGG 1 cut(s) 135
BseDI CCNNGG 1 cut(s) 135
BseGI GGATG 1 cut(s) 24
BseXI GCAGC 1 cut(s) 103
Bsp143I GATC 1 cut(s) 69
BspACI CCGC 2 cut(s) 47, 132
BssECI CCNNGG 1 cut(s) 135
BssMI GATC 1 cut(s) 69
BssT1I CCWWGG 1 cut(s) 135
BstF5I GGATG 1 cut(s) 24
BstKTI GATC 1 cut(s) 72
BstMBI GATC 1 cut(s) 69
BstMWI GCNNNNNNNGC 1 cut(s) 30
BstV1I GCAGC 1 cut(s) 103
BtsCI GGATG 1 cut(s) 24
CaiI CAGNNNCTG 1 cut(s) 34
CviJI RGCY 1 cut(s) 33
CviKI_1 RGCY 1 cut(s) 33
DpnI GATC 1 cut(s) 71
DpnII GATC 1 cut(s) 69
Eco130I CCWWGG 1 cut(s) 135
EcoT14I CCWWGG 1 cut(s) 135
ErhI CCWWGG 1 cut(s) 135
Fnu4HI GCNGC 1 cut(s) 117
FokI GGATG 1 cut(s) 11
Fsp4HI GCNGC 1 cut(s) 117
GluI GCNGC 1 cut(s) 117
Hpy188I TCNGA 1 cut(s) 66
Hpy188III TCNNGA 3 cut(s) 10, 28, 147
HpyCH4IV ACGT 1 cut(s) 141
HpyCH4V TGCA 1 cut(s) 127
HpyF10VI GCNNNNNNNGC 1 cut(s) 30
HpySE526I ACGT 1 cut(s) 141
Kzo9I GATC 1 cut(s) 69
LpnPI CCDG 3 cut(s) 39, 41, 47
Lsp1109I GCAGC 1 cut(s) 103
LweI GCATC 1 cut(s) 33
MaeII ACGT 1 cut(s) 141
MalI GATC 1 cut(s) 71
MboI GATC 1 cut(s) 69
MluCI AATT 1 cut(s) 81
MmeI TCCRAC 1 cut(s) 18
MwoI GCNNNNNNNGC 1 cut(s) 30
NdeII GATC 1 cut(s) 69
PkrI GCNGC 1 cut(s) 118
PstNI CAGNNNCTG 1 cut(s) 34
SatI GCNGC 1 cut(s) 117
Sau3AI GATC 1 cut(s) 69
SetI ASST 1 cut(s) 144
SfaNI GCATC 1 cut(s) 33
SgeI CNNG 5 cut(s) 22, 40, 46, 66, 136
Sse9I AATT 1 cut(s) 81
SsiI CCGC 2 cut(s) 47, 132
StyI CCWWGG 1 cut(s) 135
TaiI ACGT 1 cut(s) 144
TasI AATT 1 cut(s) 81
TseI GCWGC 1 cut(s) 116
XapI RAATTY 1 cut(s) 81
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.