AT2G19230

regulation of vesicle fusion

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
OG0017471
Physical Location & Seq
Reverse (-)
8343452 .. 8348431
4980 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G19230.2

Sequence Viewer

Length: 3078 bp
ATGGGGAATTTCAACTTTCTTCCGCTAGTTTCTTTCGCAAGCTTTGTTGTTGTCCTTGTTCTTGTTTGTGCTCAAGACCAATCAGGTTTTGTTAGTATAGATTGTGGTATACCAGAAGATTCCAGTTATTACGATGAGAAAACAGACATAAAATACATTTCAGATGCTGCATTTGTCGAGTCCGGGACAATTCATAGCATAGATTCTAAGTTTCAGAAAAAAAATCTTGAGAAACAGTTCCAAAAGGTTAGGAGCTTCCCTGAAGGCAAGAAAAACTGTTACGATGTGCAGCCTCCTCAGGGAAAAGGCTTCAAGTATCTGATAAGAACCCGTTTCATGTACGGTAACTACGATAATCTAGGGAAAGCACCCGACTTCGATCTTTATCTTGGTGTCAATCTCTGGGATTCTGTTACTCTTGAGAATTCAACTACTATAGTCACCAAAGAGATCATCTACACTCTTCGCTCGGACAAGGTTCATGTGTGTCTTGTTGATAAAGAAAGAGGAACTCCATTCTTGTCTGTCTTAGAACTCAGGCTCCTGAAAAATAATATATACGAGACTGCTTCTGATTCTCTTATGCTGTATCGAAGATGGGATCTTGGTGCAACCGGAGATCTTCCTGCCAGGTACAAAGACGATATTTTTGACCGCTTCTGGATGCCGTTGATGTTTCCGAACTTTTTGATCCTCAATACGTCGCTGATGATAGATCCGACTAGCAGCAACGGATTCTTACCCCCTAGTGTTGTCATGAGCACTGCAGTAGCACCAATGAATTCCAGCATAGAGCAGATAATGGTTTATTGGGAACCACGGGACCCAAATTGGAAATTCTATATATACATACACTTTGCTGAAGTTGAGAAACTTCCAAGTAATGAGACAAGGGAGTTCTCTGTGTTTCTGAACAAAGAGCAGATCGACACTACTAGTGTGTTTAGGCCTAGCTACTTGTATACAGATACACTTTACGTTCAAAACCCCGTGAGCGGACCATTTCTCGAATTTGTTCTTAGACAAGGTGTTAAGTCCACGCGTCCTCCTATCATGAATGCCATCGAGACATATCGTACCAACGAGTTTCTTGATTTGCCTACTGATCAAAATGATGTTGATGCAATTATGAAAATAAAGACCAAGTATAAAGTGAAGAAGAACTGGCTCGGAGATCCTTGTGCTCCATTTGGCTATCCTTGGCAGGGTATTAATTGTAGCTACACCGCTAACAATCCTCCGAGAATCATTTCTGTGAACCTATCCTTTAGTGGATTGACTGGCCAGATTGATCCAGTCTTCATCACCCTTACACCATTACAGAAACTAGACTTATCAAATAACAGATTAACAGGAACAGTACCTGATTTCCTTGCTAATTTACCGGATTTAACCGAGTTAAACTTGGAAGAAAACAAGTTAACGGGTATCCTCCCGGAGAAACTATTGGAGAGATCAAAAGATGGATCGCTTTCTCTGAGAGTTGGCGGGAATCCAGACCTTTGCGTGTCTGATTCATGTCGAAACAAAAAGACGGAGAGGAAAGAATACATTATTCCATCAGTAGCATCTGTTACAGGATTGTTTTTTCTCTTGCTCGCATTAATTTCTTTCTGGCAATTCAAGAAGAGACAACAAACAGGTGTCAAGACCGGACCACTAGACACAAAGCGATACTACAAGTATTCAGAAATAGTGGAAATTACAAACAACTTTGAGAGAGTTCTTGGCCAAGGAGGCTTCGGAAAAGTATACTATGGTGTCTTACGTGGGGAACAAGTTGCTATCAAGATGTTGTCTAAATCATCAGCTCAAGGCTACAAAGAATTCCGAGCAGAGGTTGAACTTCTCCTGAGAGTTCATCACAAGAACCTAATAGCTCTTATTGGATACTGCCACGAAGGAGATCAAATGGCACTTATCTACGAGTATATCGGTAATGGGACCTTGGGAGACTACTTGTCAGGGAAAAACTCGAGTATTTTGAGCTGGGAGGAAAGGTTACAGATATCATTAGATGCAGCACAAGGGCTAGAGTATCTCCACAATGGATGCAAACCTCCTATAGTTCACAGAGATGTGAAACCTACGAACATTCTAATCAACGAAAAGCTCCAGGCCAAGATCGCTGACTTCGGTTTATCTAGAAGCTTCACACTGGAAGGTGACAGTCAGGTTTCAACTGAAGTCGCTGGAACTATTGGCTATCTTGACCCTGAGCACTACTCGATGCAGCAATTCAGCGAGAAGAGTGATGTTTATAGCTTTGGGGTGGTACTCCTGGAGGTAATCACGGGCCAACCGGTAATTTCACGTTCAAGGACTGAAGAGAACAGACATATAAGCGACCGAGTTAGCTTGATGCTGTCTAAAGGAGATATCAAAAGCATTGTGGATCCGAAGCTAGGAGAGAGGTTCAACGCTGGCTTGGCCTGGAAGATCACTGAAGTAGCATTGGCTTGTGCGTCTGAAAGTACTAAGACAAGACTCACGATGAGTCAGGTTGTGGCTGAGCTAAAAGAGAGTCTATGCAGAGCAAGAACCAGTGGTGATTCTGGAGATATTTCTTTTAGCGAGCCGACGGAGATGAACGTGTCCATGACTGTTGACCCGGGGGTGCTTCCTCAACCGAGAAATGAGTATCCAGTAACTCAGCCTGATGCAGTCAACTCTACAGATAAATCTGTGGGCATTACTAAGGAGCACAACCTTTTACATGGAATAGTCCAGTGGTTCCGGAAGCTTAAACACACTTTGTCAAGTGAGGAGACTTCAGATAGAAAAGCTTCTGATGCCACAAAGACCAGTGATCAATGGAGACTCAAATCAGAATCTGATGAGGACTCTGAAGAACCTTGGCCAGTCCATGCTCTAACACATTCAGGTAACAAGTATGAGTATGTTAGTTTCTTGCCTCTAGTGGCAGTTGAGTTGGTTTTCCAACAAGAACCTAGTCTGGTTCAGGCAGGATTGATAGGGAACTTTGCTAAAACCAATTTGATCGAAAAGGGACAAGTCACTGCTACAACAGCACTTAAGGAGCTTCGGAAACTCAGTAATCTGTTGTCAGAGATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0002090 GO:0002092 GO:0003674 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005773 GO:0005776 GO:0005794 GO:0005802 GO:0005829 GO:0006810 GO:0006886 GO:0006914 GO:0006950 GO:0007154 GO:0007165 GO:0007186 GO:0007187 GO:0007188 GO:0007193 GO:0008047 GO:0008104 GO:0008150 GO:0008152 GO:0009056 GO:0009410 GO:0009605 GO:0009893 GO:0009987 GO:0009991 GO:0010008 GO:0010033 GO:0010243 GO:0010604 GO:0012505 GO:0014070 GO:0014074 GO:0015031 GO:0015833 GO:0016020 GO:0016192 GO:0016197 GO:0016236 GO:0016482 GO:0017016 GO:0017137 GO:0019222 GO:0019899 GO:0023052 GO:0030100 GO:0030234 GO:0030695 GO:0030904 GO:0031000 GO:0031090 GO:0031156 GO:0031267 GO:0031323 GO:0031325 GO:0031338 GO:0031410 GO:0031667 GO:0031982 GO:0031984 GO:0032879 GO:0032991 GO:0033036 GO:0033043 GO:0034613 GO:0035612 GO:0036270 GO:0042147 GO:0042221 GO:0042493 GO:0042594 GO:0042886 GO:0043085 GO:0043087 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043279 GO:0043547 GO:0043900 GO:0044093 GO:0044237 GO:0044248 GO:0044422 GO:0044424 GO:0044425 GO:0044431 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0045184 GO:0045807 GO:0046907 GO:0048259 GO:0048260 GO:0048518 GO:0048519 GO:0048522 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050896 GO:0051020 GO:0051049 GO:0051050 GO:0051128 GO:0051130 GO:0051179 GO:0051234 GO:0051336 GO:0051345 GO:0051641 GO:0051649 GO:0051716 GO:0060255 GO:0060589 GO:0060627 GO:0061919 GO:0065007 GO:0065009 GO:0070727 GO:0071702 GO:0071705 GO:0090630 GO:0097708 GO:0098588 GO:0098772 GO:0098791 GO:0098796 GO:0098805 GO:1901698 GO:1903664 GO:1903665 GO:1905394
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RabGAP-TBC

Protein Analysis

1025

Amino Acids

115.56

Weight (kDa)

5.74

Isoelectric Point (pI)

35.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 33 - 359 9.8e-116 Malectin-like domain
LRR_8 PF13855 419 - 474 3.4e-08 Leucine rich repeat
LRR_4 PF12799 440 - 477 1.4e-06 Leucine Rich repeats (2 copies)
PK_Tyr_Ser-Thr PF07714 571 - 836 7.5e-49 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 572 - 836 2.2e-49 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0017471)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G05700 AT1G05700 AT2G19190 AT2G19210 AT2G19230 AT2G19230 AT4G29990 AT4G29990
rosa_chinensis RchiOBHm_Chr2g0141231
rosa_samantha Rh6AG373700 Rh6BG382300 Rh6DG374800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 996
AccI GTMKAC 3 cut(s) 109, 962, 1752
AccII CGCG 1 cut(s) 1042
AccIII TCCGGA 1 cut(s) 2736
AciI CCGC 5 cut(s) 23, 655, 996, 1227, 1488
AclWI GGATC 8 cut(s) 609, 685, 710, 1169, 1286, 1474, 2390, 2403
AcoI YGGCCR 3 cut(s) 1282, 1729, 2858
AcsI RAATTY 6 cut(s) 7, 424, 781, 836, 1010, 1826
AcuI CTGAAG 7 cut(s) 282, 882, 2205, 2346, 2466, 2757, 2868
AfaI GTAC 6 cut(s) 341, 635, 1078, 1362, 2277, 2476
AfiI CCNNNNNNNGG 5 cut(s) 299, 995, 1205, 1837, 2405
AflII CTTAAG 1 cut(s) 3035
AflIII ACRYGT 2 cut(s) 1040, 2592
AgeI ACCGGT 1 cut(s) 2302
AgsI TTSAA 9 cut(s) 13, 313, 429, 983, 1624, 1844, 2181, 2319, 2419
AhdI GACNNNNNGTC 1 cut(s) 1960
AhlI ACTAGT 1 cut(s) 935
AjnI CCWGG 4 cut(s) 629, 2115, 2280, 2432
AloI GAACNNNNNNTCC 2 cut(s) 525, 557
Alw21I GWGCWC 5 cut(s) 73, 764, 1186, 2223, 2706
Alw26I GTCTC 7 cut(s) 557, 881, 1061, 1624, 1947, 2762, 2812
AlwI GGATC 8 cut(s) 609, 685, 710, 1169, 1286, 1474, 2390, 2403
AlwNI CAGNNNCTG 3 cut(s) 167, 1364, 2834
Ama87I CYCGRG 2 cut(s) 1975, 2611
Aor13HI TCCGGA 1 cut(s) 2736
AoxI GGCC 7 cut(s) 947, 1282, 1729, 2118, 2296, 2430, 2858
ApeKI GCWGC 5 cut(s) 167, 289, 726, 2021, 2233
ApoI RAATTY 6 cut(s) 7, 424, 781, 836, 1010, 1826
ArsI GACNNNNNNTTYG 2 cut(s) 632, 664
AseI ATTAAT 2 cut(s) 1212, 1604
AsiGI ACCGGT 1 cut(s) 2302
Asp700I GAANNNNTTC 4 cut(s) 236, 1014, 1249, 2785
AspS9I GGNCC 5 cut(s) 823, 998, 1655, 1944, 2296
AsuC2I CCSGG 4 cut(s) 184, 1436, 2612, 2613
AsuHPI GGTGA 4 cut(s) 433, 1297, 2177, 2561
AvaI CYCGRG 2 cut(s) 1975, 2611
AvaII GGWCC 4 cut(s) 823, 998, 1655, 1944
AxyI CCTNAGG 1 cut(s) 297
BalI TGGCCA 3 cut(s) 1284, 1731, 2860
BamHI GGATCC 1 cut(s) 2395
BbsI GAAGAC 1 cut(s) 1291
Bbv12I GWGCWC 5 cut(s) 73, 764, 1186, 2223, 2706
BbvI GCAGC 5 cut(s) 154, 301, 738, 2033, 2245
BccI CCATC 4 cut(s) 591, 1070, 1457, 1567
BceAI ACGGC 1 cut(s) 652
BciT130I CCWGG 4 cut(s) 631, 2117, 2282, 2434
BciVI GTATCC 3 cut(s) 1439, 1883, 2652
BclI TGATCA 2 cut(s) 1105, 2809
BcnI CCSGG 4 cut(s) 184, 1436, 2612, 2613
BcoDI GTCTC 7 cut(s) 557, 881, 1061, 1624, 1947, 2762, 2812
BcuI ACTAGT 1 cut(s) 935
BfmI CTRYAG 4 cut(s) 435, 765, 2064, 2673
BfrI CTTAAG 1 cut(s) 3035
BfuI GTATCC 3 cut(s) 1439, 1883, 2652
BglI GCCNNNNNGGC 1 cut(s) 1737
BglII AGATCT 1 cut(s) 619
BisI GCNGC 5 cut(s) 168, 290, 727, 2022, 2234
BlpI GCTNAGC 1 cut(s) 2511
BlsI GCNGC 5 cut(s) 169, 291, 728, 2023, 2235
BmcAI AGTACT 1 cut(s) 2476
Bme1390I CCNGG 8 cut(s) 184, 631, 1436, 2117, 2282, 2434, 2612, 2613
Bme18I GGWCC 4 cut(s) 823, 998, 1655, 1944
BmeRI GACNNNNNGTC 1 cut(s) 1960
BmeT110I CYCGRG 2 cut(s) 1975, 2611
BmgT120I GGNCC 5 cut(s) 823, 998, 1655, 1944, 2296
BmiI GGNNCC 7 cut(s) 542, 816, 824, 825, 1945, 2397, 2735
BmrFI CCNGG 8 cut(s) 184, 631, 1436, 2117, 2282, 2434, 2612, 2613
BpiI GAAGAC 1 cut(s) 1291
BplI GAGNNNNNCTC 2 cut(s) 2210, 2242
BpmI CTGGAG 3 cut(s) 2099, 2303, 2577
Bpu10I CCTNAGC 1 cut(s) 2217
Bpu1102I GCTNAGC 1 cut(s) 2511
BpuEI CTTGAG 4 cut(s) 57, 248, 440, 1797
BpuMI CCSGG 4 cut(s) 184, 1436, 2612, 2613
BsaAI YACGTR 1 cut(s) 1769
BsaBI GATNNNNATC 1 cut(s) 384
BsaJI CCNNGG 7 cut(s) 818, 1199, 1732, 1947, 2611, 2612, 2855
BsaWI WCCGGW 5 cut(s) 614, 1384, 1652, 2302, 2736
BsaXI ACNNNNNCTCC 6 cut(s) 525, 555, 1030, 1060, 1985, 2015
Bsc4I CCNNNNNNNGG 5 cut(s) 299, 995, 1205, 1837, 2405
Bse118I RCCGGY 1 cut(s) 2302
Bse21I CCTNAGG 1 cut(s) 297
Bse8I GATNNNNATC 1 cut(s) 384
BseAI TCCGGA 1 cut(s) 2736
BseBI CCWGG 4 cut(s) 631, 2117, 2282, 2434
BseDI CCNNGG 7 cut(s) 818, 1199, 1732, 1947, 2611, 2612, 2855
BseGI GGATG 2 cut(s) 669, 2057
BseJI GATNNNNATC 1 cut(s) 384
BseLI CCNNNNNNNGG 5 cut(s) 299, 995, 1205, 1837, 2405
BseMII CTCAG 8 cut(s) 311, 550, 1469, 1844, 2208, 2502, 2666, 3067
BseRI GAGGAG 2 cut(s) 285, 2780
BseXI GCAGC 5 cut(s) 154, 301, 738, 2033, 2245
BseYI CCCAGC 1 cut(s) 1989
BsgI GTGCAG 1 cut(s) 308
Bsh1236I CGCG 1 cut(s) 1042
Bsh1285I CGRYCG 1 cut(s) 2350
BshFI GGCC 7 cut(s) 949, 1284, 1731, 2120, 2298, 2432, 2860
BshTI ACCGGT 1 cut(s) 2302
BsiEI CGRYCG 1 cut(s) 2350
BsiHKAI GWGCWC 5 cut(s) 73, 764, 1186, 2223, 2706
BsiHKCI CYCGRG 2 cut(s) 1975, 2611
BsiSI CCGG 8 cut(s) 183, 615, 1385, 1436, 1653, 2303, 2612, 2737
BslFI GGGAC 4 cut(s) 199, 836, 1957, 3024
BslI CCNNNNNNNGG 5 cut(s) 299, 995, 1205, 1837, 2405
BsmAI GTCTC 7 cut(s) 557, 881, 1061, 1624, 1947, 2762, 2812
BsmFI GGGAC 4 cut(s) 199, 836, 1957, 3024
BsmI GAATGC 1 cut(s) 1063
BsnI GGCC 7 cut(s) 949, 1284, 1731, 2120, 2298, 2432, 2860
BsoBI CYCGRG 2 cut(s) 1975, 2611
Bsp1286I GDGCHC 5 cut(s) 73, 764, 1186, 2223, 2706
Bsp13I TCCGGA 1 cut(s) 2736
Bsp1720I GCTNAGC 1 cut(s) 2511
BspACI CCGC 5 cut(s) 23, 655, 996, 1227, 1488
BspANI GGCC 7 cut(s) 949, 1284, 1731, 2120, 2298, 2432, 2860
BspCNI CTCAG 8 cut(s) 310, 549, 1470, 1845, 2209, 2503, 2665, 3066
BspEI TCCGGA 1 cut(s) 2736
BspFNI CGCG 1 cut(s) 1042
BspHI TCATGA 2 cut(s) 756, 1053
BspLI GGNNCC 7 cut(s) 542, 816, 824, 825, 1945, 2397, 2735
BspMAI CTGCAG 1 cut(s) 769
BspPI GGATC 8 cut(s) 609, 685, 710, 1169, 1286, 1474, 2390, 2403
BspTI CTTAAG 1 cut(s) 3035
BsrBI CCGCTC 1 cut(s) 996
BsrFI RCCGGY 1 cut(s) 2302
BssAI RCCGGY 1 cut(s) 2302
BssECI CCNNGG 7 cut(s) 818, 1199, 1732, 1947, 2611, 2612, 2855
BssNAI GTATAC 3 cut(s) 110, 963, 1753
BssT1I CCWWGG 4 cut(s) 1199, 1732, 1947, 2855
Bst1107I GTATAC 3 cut(s) 110, 963, 1753
Bst2UI CCWGG 4 cut(s) 631, 2117, 2282, 2434
Bst4CI ACNGT 6 cut(s) 237, 278, 344, 1360, 2171, 2605
Bst6I CTCTTC 4 cut(s) 468, 1622, 2243, 2322
BstAFI CTTAAG 1 cut(s) 3035
BstBAI YACGTR 1 cut(s) 1769
BstC8I GCNNGC 4 cut(s) 40, 1599, 2425, 2576
BstDSI CCRYGG 1 cut(s) 818
BstF5I GGATG 2 cut(s) 669, 2057
BstFNI CGCG 1 cut(s) 1042
BstMAI GTCTC 7 cut(s) 557, 881, 1061, 1624, 1947, 2762, 2812
BstMCI CGRYCG 1 cut(s) 2350
BstMWI GCNNNNNNNGC 5 cut(s) 1737, 2126, 2429, 2792, 3029
BstNI CCWGG 4 cut(s) 631, 2117, 2282, 2434
BstSCI CCNGG 8 cut(s) 182, 629, 1434, 2115, 2280, 2432, 2610, 2611
BstSFI CTRYAG 4 cut(s) 435, 765, 2064, 2673
BstUI CGCG 1 cut(s) 1042
BstV1I GCAGC 5 cut(s) 154, 301, 738, 2033, 2245
BstV2I GAAGAC 1 cut(s) 1291
BstX2I RGATCY 5 cut(s) 601, 619, 715, 1174, 2395
BstYI RGATCY 5 cut(s) 601, 619, 715, 1174, 2395
BstZ17I GTATAC 3 cut(s) 110, 963, 1753
Bsu36I CCTNAGG 1 cut(s) 297
BsuI GTATCC 3 cut(s) 1439, 1883, 2652
BsuRI GGCC 7 cut(s) 949, 1284, 1731, 2120, 2298, 2432, 2860
BtgI CCRYGG 1 cut(s) 818
BtsCI GGATG 2 cut(s) 669, 2057
BtsI GCAGTG 2 cut(s) 762, 3018
BtsIMutI CAGTG 7 cut(s) 762, 2156, 2442, 2551, 2735, 2812, 3018
Cac8I GCNNGC 4 cut(s) 40, 1599, 2425, 2576
CaiI CAGNNNCTG 3 cut(s) 167, 1364, 2834
CciI TCATGA 2 cut(s) 756, 1053
Cfr10I RCCGGY 1 cut(s) 2302
Cfr13I GGNCC 5 cut(s) 823, 998, 1655, 1944, 2296
Cfr9I CCCGGG 1 cut(s) 2611
CseI GACGC 2 cut(s) 1031, 2454
Csp6I GTAC 6 cut(s) 340, 634, 1077, 1361, 2276, 2475
CspAI ACCGGT 1 cut(s) 2302
CviAII CATG 8 cut(s) 337, 482, 757, 1054, 1518, 2599, 2717, 2867
CviQI GTAC 6 cut(s) 340, 634, 1077, 1361, 2276, 2475
DriI GACNNNNNGTC 1 cut(s) 1960
EaeI YGGCCR 3 cut(s) 1282, 1729, 2858
Eam1104I CTCTTC 4 cut(s) 468, 1622, 2243, 2322
Eam1105I GACNNNNNGTC 1 cut(s) 1960
EarI CTCTTC 4 cut(s) 468, 1622, 2243, 2322
Eco130I CCWWGG 4 cut(s) 1199, 1732, 1947, 2855
Eco147I AGGCCT 1 cut(s) 949
Eco32I GATATC 2 cut(s) 2010, 2380
Eco47I GGWCC 4 cut(s) 823, 998, 1655, 1944
Eco57I CTGAAG 7 cut(s) 282, 882, 2205, 2346, 2466, 2757, 2868
Eco81I CCTNAGG 1 cut(s) 297
Eco88I CYCGRG 2 cut(s) 1975, 2611
EcoO109I RGGNCCY 2 cut(s) 823, 1944
EcoRI GAATTC 3 cut(s) 424, 781, 1826
EcoRII CCWGG 4 cut(s) 629, 2115, 2280, 2432
EcoRV GATATC 2 cut(s) 2010, 2380
EcoT14I CCWWGG 4 cut(s) 1199, 1732, 1947, 2855
ErhI CCWWGG 4 cut(s) 1199, 1732, 1947, 2855
FaeI CATG 8 cut(s) 340, 485, 760, 1057, 1521, 2602, 2720, 2870
FaqI GGGAC 4 cut(s) 199, 836, 1957, 3024
FatI CATG 8 cut(s) 336, 481, 756, 1053, 1517, 2598, 2716, 2866
FauI CCCGC 1 cut(s) 1481
FbaI TGATCA 2 cut(s) 1105, 2809
FblI GTMKAC 3 cut(s) 109, 962, 1752
Fnu4HI GCNGC 5 cut(s) 168, 290, 727, 2022, 2234
FokI GGATG 2 cut(s) 676, 2064
Fsp4HI GCNGC 5 cut(s) 168, 290, 727, 2022, 2234
GluI GCNGC 5 cut(s) 168, 290, 727, 2022, 2234
GsaI CCCAGC 1 cut(s) 1993
GsuI CTGGAG 3 cut(s) 2099, 2303, 2577
HaeIII GGCC 7 cut(s) 949, 1284, 1731, 2120, 2298, 2432, 2860
HapII CCGG 8 cut(s) 183, 615, 1385, 1436, 1653, 2303, 2612, 2737
HgaI GACGC 2 cut(s) 1031, 2454
Hin1II CATG 8 cut(s) 340, 485, 760, 1057, 1521, 2602, 2720, 2870
HincII GTYRAC 3 cut(s) 1422, 2608, 2668
HindII GTYRAC 3 cut(s) 1422, 2608, 2668
HindIII AAGCTT 4 cut(s) 40, 2149, 2741, 2784
HpaI GTTAAC 1 cut(s) 1422
HpaII CCGG 8 cut(s) 183, 615, 1385, 1436, 1653, 2303, 2612, 2737
HphI GGTGA 4 cut(s) 433, 1297, 2177, 2561
Hpy166II GTNNAC 9 cut(s) 110, 963, 1038, 1258, 1422, 1753, 2071, 2608, 2668
Hpy8I GTNNAC 9 cut(s) 110, 963, 1038, 1258, 1422, 1753, 2071, 2608, 2668
Hpy99I CGWCG 2 cut(s) 706, 2584
HpyAV CCTTC 3 cut(s) 257, 1895, 2156
HpyCH4III ACNGT 6 cut(s) 237, 278, 344, 1360, 2171, 2605
HpyCH4IV ACGT 5 cut(s) 701, 978, 1768, 2314, 2592
HpyF10VI GCNNNNNNNGC 5 cut(s) 1737, 2126, 2429, 2792, 3029
HpySE526I ACGT 5 cut(s) 701, 978, 1768, 2314, 2592
Hsp92II CATG 8 cut(s) 340, 485, 760, 1057, 1521, 2602, 2720, 2870
KflI GGGWCCC 1 cut(s) 823
Kpn2I TCCGGA 1 cut(s) 2736
Ksp22I TGATCA 2 cut(s) 1105, 2809
KspAI GTTAAC 1 cut(s) 1422
LmnI GCTCC 6 cut(s) 252, 546, 1189, 2118, 2701, 3040
Lsp1109I GCAGC 5 cut(s) 154, 301, 738, 2033, 2245
MaeII ACGT 5 cut(s) 701, 978, 1768, 2314, 2592
MbiI CCGCTC 1 cut(s) 996
MflI RGATCY 5 cut(s) 601, 619, 715, 1174, 2395
MhlI GDGCHC 5 cut(s) 73, 764, 1186, 2223, 2706
MlsI TGGCCA 3 cut(s) 1284, 1731, 2860
MluI ACGCGT 1 cut(s) 1040
MluNI TGGCCA 3 cut(s) 1284, 1731, 2860
MlyI GAGTC 6 cut(s) 188, 2481, 2506, 2533, 2814, 2837
MmeI TCCRAC 2 cut(s) 743, 2965
Mox20I TGGCCA 3 cut(s) 1284, 1731, 2860
MroI TCCGGA 1 cut(s) 2736
MroXI GAANNNNTTC 4 cut(s) 236, 1014, 1249, 2785
MscI TGGCCA 3 cut(s) 1284, 1731, 2860
MseI TTAA 9 cut(s) 1032, 1212, 1349, 1391, 1400, 1421, 1604, 2745, 3036
MslI CAYNNNNRTG 2 cut(s) 1253, 2076
Msp20I TGGCCA 3 cut(s) 1284, 1731, 2860
MspCI CTTAAG 1 cut(s) 3035
MspI CCGG 8 cut(s) 183, 615, 1385, 1436, 1653, 2303, 2612, 2737
MspR9I CCNGG 8 cut(s) 184, 631, 1436, 2117, 2282, 2434, 2612, 2613
Mva1269I GAATGC 1 cut(s) 1063
MvaI CCWGG 4 cut(s) 631, 2117, 2282, 2434
MvnI CGCG 1 cut(s) 1042
MwoI GCNNNNNNNGC 5 cut(s) 1737, 2126, 2429, 2792, 3029
NciI CCSGG 4 cut(s) 184, 1436, 2612, 2613
NlaIII CATG 8 cut(s) 340, 485, 760, 1057, 1521, 2602, 2720, 2870
NlaIV GGNNCC 7 cut(s) 542, 816, 824, 825, 1945, 2397, 2735
NmuCI GTSAC 3 cut(s) 439, 2165, 3016
PaeR7I CTCGAG 1 cut(s) 1975
PagI TCATGA 2 cut(s) 756, 1053
PceI AGGCCT 1 cut(s) 949
PcsI WCGNNNNNNNCGW 1 cut(s) 348
PctI GAATGC 1 cut(s) 1063
PdmI GAANNNNTTC 4 cut(s) 236, 1014, 1249, 2785
PfoI TCCNGGA 3 cut(s) 182, 1434, 2280
PinAI ACCGGT 1 cut(s) 2302
PkrI GCNGC 5 cut(s) 169, 291, 728, 2023, 2235
PleI GAGTC 6 cut(s) 187, 2481, 2505, 2532, 2814, 2837
PpsI GAGTC 6 cut(s) 187, 2481, 2505, 2532, 2814, 2837
Ppu21I YACGTR 1 cut(s) 1769
PpuMI RGGWCCY 2 cut(s) 823, 1944
PshBI ATTAAT 2 cut(s) 1212, 1604
Psp5II RGGWCCY 2 cut(s) 823, 1944
Psp6I CCWGG 4 cut(s) 629, 2115, 2280, 2432
PspFI CCCAGC 1 cut(s) 1989
PspGI CCWGG 4 cut(s) 629, 2115, 2280, 2432
PspN4I GGNNCC 7 cut(s) 542, 816, 824, 825, 1945, 2397, 2735
PspPI GGNCC 5 cut(s) 823, 998, 1655, 1944, 2296
PspPPI RGGWCCY 2 cut(s) 823, 1944
PspXI VCTCGAGB 1 cut(s) 1975
PstI CTGCAG 1 cut(s) 769
PstNI CAGNNNCTG 3 cut(s) 167, 1364, 2834
PsuI RGATCY 5 cut(s) 601, 619, 715, 1174, 2395
RsaI GTAC 6 cut(s) 341, 635, 1078, 1362, 2277, 2476
RsaNI GTAC 6 cut(s) 340, 634, 1077, 1361, 2276, 2475
RseI CAYNNNNRTG 2 cut(s) 1253, 2076
SaqAI TTAA 9 cut(s) 1032, 1212, 1349, 1391, 1400, 1421, 1604, 2745, 3036
SatI GCNGC 5 cut(s) 168, 290, 727, 2022, 2234
Sau96I GGNCC 5 cut(s) 823, 998, 1655, 1944, 2296
ScaI AGTACT 1 cut(s) 2476
SchI GAGTC 6 cut(s) 188, 2481, 2506, 2533, 2814, 2837
ScrFI CCNGG 8 cut(s) 184, 631, 1436, 2117, 2282, 2434, 2612, 2613
SduI GDGCHC 5 cut(s) 73, 764, 1186, 2223, 2706
SfcI CTRYAG 4 cut(s) 435, 765, 2064, 2673
Sfr274I CTCGAG 1 cut(s) 1975
SinI GGWCC 4 cut(s) 823, 998, 1655, 1944
SlaI CTCGAG 1 cut(s) 1975
SmaI CCCGGG 1 cut(s) 2613
SmiMI CAYNNNNRTG 2 cut(s) 1253, 2076
SmlI CTYRAG 6 cut(s) 72, 227, 419, 1812, 1975, 3035
SmoI CTYRAG 6 cut(s) 72, 227, 419, 1812, 1975, 3035
SpeI ACTAGT 1 cut(s) 935
SseBI AGGCCT 1 cut(s) 949
SsiI CCGC 5 cut(s) 23, 655, 996, 1227, 1488
StuI AGGCCT 1 cut(s) 949
StyD4I CCNGG 8 cut(s) 182, 629, 1434, 2115, 2280, 2432, 2610, 2611
StyI CCWWGG 4 cut(s) 1199, 1732, 1947, 2855
TaaI ACNGT 6 cut(s) 237, 278, 344, 1360, 2171, 2605
TaiI ACGT 5 cut(s) 704, 981, 1771, 2317, 2595
TaqII GACCGA 1 cut(s) 2364
TatI WGTACW 1 cut(s) 2474
Tru1I TTAA 9 cut(s) 1032, 1212, 1349, 1391, 1400, 1421, 1604, 2745, 3036
Tru9I TTAA 9 cut(s) 1032, 1212, 1349, 1391, 1400, 1421, 1604, 2745, 3036
TscAI CASTG 7 cut(s) 769, 2163, 2449, 2551, 2735, 2812, 3025
TseFI GTSAC 3 cut(s) 439, 2165, 3016
TseI GCWGC 5 cut(s) 167, 289, 726, 2021, 2233
Tsp45I GTSAC 3 cut(s) 439, 2165, 3016
TspGWI ACGGA 3 cut(s) 747, 1550, 2597
TspMI CCCGGG 1 cut(s) 2611
TspRI CASTG 7 cut(s) 769, 2163, 2449, 2551, 2735, 2812, 3025
Vha464I CTTAAG 1 cut(s) 3035
VpaK11BI GGWCC 4 cut(s) 823, 998, 1655, 1944
VspI ATTAAT 2 cut(s) 1212, 1604
XapI RAATTY 6 cut(s) 7, 424, 781, 836, 1010, 1826
XbaI TCTAGA 1 cut(s) 2144
XhoI CTCGAG 1 cut(s) 1975
XmaI CCCGGG 1 cut(s) 2611
XmiI GTMKAC 3 cut(s) 109, 962, 1752
XmnI GAANNNNTTC 4 cut(s) 236, 1014, 1249, 2785
ZrmI AGTACT 1 cut(s) 2476
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.