AT2G37070

BEST Arabidopsis thaliana protein match is

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Forward (+)
15578344 .. 15581338
2995 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G37070.1

Sequence Viewer

Length: 1593 bp
ATGGGAGAAGAGAAGGAGAACTGGAGAAGCGAGCTCGACGATATCAATGGGCTTAGTCTGATTGATTTCTCCGCCGAGGATGATAACCTCCTCCTCTCTTCCTTTCTCGATCCCACCACCTTTGATTTCTCAGATACTGATAAGGAAGACAGAGGTCTTTGTTTATTTGGAGATACACATAATTGTTGTGATGAAGAGACTTTGGGCTCTACTACTTTAGAAGAGAAGGAGCCTCATAAGATCATGAAGACTAACCTACGCAAAAGTCTTGCTTGGGACAAAGCCTTTTTCACCAATGCAGGTGTTTTGGAACCGGATGAACTGTCTAGCATGATGGGGAGGAAAAGTTTACCAGCGGTTCAAGAGGATTTGCATAGATCAACAGAGTCTATGTCTACATTGAAAAGTGACTGCACTGTGGAGACTGGTCAGGAATTTTTTATGTGTGATGCTGCAACACCTGACAAGCGTAAGGACTTGGGATCAACAGAGGCAGTACCTAGCCCAACTACAAGTACACTAGACGACCCTAGCTCTGAGGAAAAGATGAAACCCAATCCTATTCGTAAAAGGCCAGGTATTAGATCACAAGGATTAGCGAAGGCGACAAAGCATCCTGTCGCTTCAGAAGAACACAATACATCCATTTCCAGGCCATCCACTGGACTCAACAGGCCATCCAGTGGACTCAGCAAAACAAAAAGAGCTTCGGTAGATACTAACAAAGCCAAACAAGAAACGAATCCTAAATCATCTGGGGGTAAAGAGCCTTTGGCTTCCAGAGTTCCAATTTCAAGAAGACCTCGACCCATTGTATCAACACCTGTAGTGCCTTTTAAATCTGCTTTACGTTCTTCAGTCGCCTCCAAGAATGAATTAACATCTTCTTGCTCTTCCATTGAGAGCTGTCTCAGTGTTTCGTCAACCGCTTCTAACAAGCCTTCTATACATTCAGTAAAGCAGAAGAAAGATCAGAGTTTAAGAATAGCTTCCCATTCTTTGGCAAATAGACCAAAATCCAGCGCTGGATCTAGAAATATAGACCAGCTTAAAGTTCCACCCGTCTCAGCCGGTAGGACATACAAGTTCAATGTATCACGTCTTAGTTCTAGTGTTGACTGGTCATCGGAATCACCGCGAGCTTTTACTCCTAATAAAATGGCTAAAGGTAACAAGAAAAGTGTCCATGGTGATAACGGTCCTCCAACTGATTATACAACACAGACTTTGAAACCTCTGAACAATTCTAAAGATGTATCTGTTGTCCAAGATGACCCAAAGCCTTCTGCTTCCATGATGAAACCAACGGGACTCCGTGTGCCATCGCCAAAAGTTGGCTACTTTGACGGAGCGAGGGGCAGCGTTGCACGAACACCCACGGGATCCTGTACTGGTCCGGTAAGTGGCTTGTCAAAACATGGAGCTTGTAGTCCCGATGAATTTACTCCAAGTAGAACTGCAAAGTCCCAACCCACAATGTCTAAAGCAGCGGTTCGTCCAGTTTCAAGGAGTTCAAGGCTGATTGTCTCGGCTTCACCAAAGCTTACCAACAAAAGGTATTCAAAAGTCAGTGCAGAGGAACAACTTGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

530

Amino Acids

57.22

Weight (kDa)

9.28

Isoelectric Point (pI)

59.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 290
Acc36I ACCTGC 1 cut(s) 290
AccB7I CCANNNNNTGG 4 cut(s) 662, 683, 1000, 1334
AccI GTMKAC 1 cut(s) 395
AccII CGCG 1 cut(s) 1138
AciI CCGC 5 cut(s) 72, 356, 927, 1136, 1490
AclWI GGATC 5 cut(s) 104, 490, 1036, 1377, 1390
AcsI RAATTY 2 cut(s) 434, 1439
AcuI CTGAAG 2 cut(s) 609, 840
AfaI GTAC 3 cut(s) 498, 517, 1390
AfeI AGCGCT 1 cut(s) 1024
AfiI CCNNNNNNNGG 7 cut(s) 651, 662, 683, 1000, 1334, 1403, 1554
AgsI TTSAA 8 cut(s) 362, 403, 795, 1090, 1231, 1506, 1515, 1563
AjiI CACGTC 1 cut(s) 1100
AjnI CCWGG 2 cut(s) 574, 650
AluBI AGCT 9 cut(s) 34, 534, 707, 906, 989, 1048, 1142, 1424, 1543
AluI AGCT 9 cut(s) 34, 534, 707, 906, 989, 1048, 1142, 1424, 1543
Alw21I GWGCWC 1 cut(s) 36
Alw26I GTCTC 5 cut(s) 191, 416, 914, 1069, 1531
AlwI GGATC 5 cut(s) 104, 490, 1036, 1377, 1390
AlwNI CAGNNNCTG 1 cut(s) 137
Aor51HI AGCGCT 1 cut(s) 1024
AoxI GGCC 3 cut(s) 572, 653, 674
ApeKI GCWGC 3 cut(s) 452, 1359, 1487
ApoI RAATTY 2 cut(s) 434, 1439
Asp700I GAANNNNTTC 1 cut(s) 988
AspLEI GCGC 1 cut(s) 1025
AspS9I GGNCC 2 cut(s) 1199, 1394
AsuHPI GGTGA 4 cut(s) 283, 1125, 1202, 1527
AvaII GGWCC 2 cut(s) 1199, 1394
BamHI GGATCC 1 cut(s) 1382
BanII GRGCYC 2 cut(s) 36, 209
BbsI GAAGAC 3 cut(s) 153, 254, 805
Bbv12I GWGCWC 1 cut(s) 36
BbvI GCAGC 3 cut(s) 439, 1371, 1499
BccI CCATC 4 cut(s) 328, 664, 685, 1330
BciT130I CCWGG 2 cut(s) 576, 652
BcoDI GTCTC 5 cut(s) 191, 416, 914, 1069, 1531
BfaI CTAG 6 cut(s) 327, 501, 521, 531, 1032, 1110
BfmI CTRYAG 1 cut(s) 825
BfoI RGCGCY 1 cut(s) 1026
BfuAI ACCTGC 1 cut(s) 290
BisI GCNGC 3 cut(s) 453, 1360, 1488
BlsI GCNGC 3 cut(s) 454, 1361, 1489
Bme1390I CCNGG 2 cut(s) 576, 652
Bme18I GGWCC 2 cut(s) 1199, 1394
BmgBI CACGTC 1 cut(s) 1100
BmgT120I GGNCC 2 cut(s) 1199, 1394
BmiI GGNNCC 3 cut(s) 231, 312, 1384
BmrFI CCNGG 2 cut(s) 576, 652
BmsI GCATC 2 cut(s) 439, 622
BoxI GACNNNNGTC 1 cut(s) 153
BpiI GAAGAC 3 cut(s) 153, 254, 805
BpmI CTGGAG 1 cut(s) 43
BsaJI CCNNGG 3 cut(s) 75, 1186, 1377
BsaWI WCCGGW 2 cut(s) 313, 1396
BsaXI ACNNNNNCTCC 2 cut(s) 331, 361
Bsc4I CCNNNNNNNGG 7 cut(s) 651, 662, 683, 1000, 1334, 1403, 1554
Bse118I RCCGGY 1 cut(s) 1070
Bse1I ACTGG 7 cut(s) 26, 430, 667, 681, 1124, 1396, 1499
BseBI CCWGG 2 cut(s) 576, 652
BseDI CCNNGG 3 cut(s) 75, 1186, 1377
BseGI GGATG 6 cut(s) 85, 322, 613, 641, 656, 677
BseLI CCNNNNNNNGG 7 cut(s) 651, 662, 683, 1000, 1334, 1403, 1554
BseMII CTCAG 5 cut(s) 144, 528, 703, 925, 1080
BseNI ACTGG 7 cut(s) 26, 430, 667, 681, 1124, 1396, 1499
BseRI GAGGAG 2 cut(s) 80, 83
BseXI GCAGC 3 cut(s) 439, 1371, 1499
BsgI GTGCAG 2 cut(s) 397, 1593
Bsh1236I CGCG 1 cut(s) 1138
BshFI GGCC 3 cut(s) 574, 655, 676
BsiHKAI GWGCWC 1 cut(s) 36
BsiSI CCGG 3 cut(s) 314, 1071, 1397
BslFI GGGAC 4 cut(s) 290, 1323, 1416, 1450
BslI CCNNNNNNNGG 7 cut(s) 651, 662, 683, 1000, 1334, 1403, 1554
BsmAI GTCTC 5 cut(s) 191, 416, 914, 1069, 1531
BsmBI CGTCTC 1 cut(s) 1069
BsmFI GGGAC 4 cut(s) 290, 1323, 1416, 1450
BsnI GGCC 3 cut(s) 574, 655, 676
Bsp1286I GDGCHC 2 cut(s) 36, 209
Bsp143I GATC 8 cut(s) 109, 240, 377, 482, 584, 970, 1028, 1382
Bsp19I CCATGG 1 cut(s) 1186
BspACI CCGC 5 cut(s) 72, 356, 927, 1136, 1490
BspANI GGCC 3 cut(s) 574, 655, 676
BspCNI CTCAG 5 cut(s) 143, 529, 702, 924, 1079
BspFNI CGCG 1 cut(s) 1138
BspHI TCATGA 1 cut(s) 243
BspLI GGNNCC 3 cut(s) 231, 312, 1384
BspMI ACCTGC 1 cut(s) 290
BspPI GGATC 5 cut(s) 104, 490, 1036, 1377, 1390
BspQI GCTCTTC 1 cut(s) 898
BsrFI RCCGGY 1 cut(s) 1070
BsrI ACTGG 7 cut(s) 26, 430, 667, 681, 1124, 1396, 1499
BssAI RCCGGY 1 cut(s) 1070
BssECI CCNNGG 3 cut(s) 75, 1186, 1377
BssMI GATC 8 cut(s) 109, 240, 377, 482, 584, 970, 1028, 1382
BssT1I CCWWGG 1 cut(s) 1186
Bst2UI CCWGG 2 cut(s) 576, 652
Bst4CI ACNGT 3 cut(s) 324, 418, 1199
Bst6I CTCTTC 5 cut(s) 3, 103, 189, 216, 898
BstC8I GCNNGC 2 cut(s) 32, 1140
BstDEI CTNAG 7 cut(s) 53, 130, 537, 689, 911, 1066, 1103
BstDSI CCRYGG 2 cut(s) 1186, 1377
BstF5I GGATG 6 cut(s) 85, 322, 613, 641, 656, 677
BstFNI CGCG 1 cut(s) 1138
BstH2I RGCGCY 1 cut(s) 1026
BstHHI GCGC 1 cut(s) 1025
BstKTI GATC 8 cut(s) 112, 243, 380, 485, 587, 973, 1031, 1385
BstMAI GTCTC 5 cut(s) 191, 416, 914, 1069, 1531
BstMBI GATC 8 cut(s) 109, 240, 377, 482, 584, 970, 1028, 1382
BstNI CCWGG 2 cut(s) 576, 652
BstPAI GACNNNNGTC 1 cut(s) 153
BstSCI CCNGG 2 cut(s) 574, 650
BstSFI CTRYAG 1 cut(s) 825
BstUI CGCG 1 cut(s) 1138
BstV1I GCAGC 3 cut(s) 439, 1371, 1499
BstV2I GAAGAC 3 cut(s) 153, 254, 805
BstX2I RGATCY 2 cut(s) 1028, 1382
BstYI RGATCY 2 cut(s) 1028, 1382
BsuRI GGCC 3 cut(s) 574, 655, 676
BtgI CCRYGG 2 cut(s) 1186, 1377
BtgZI GCGATG 1 cut(s) 1308
BtrI CACGTC 1 cut(s) 1100
BtsCI GGATG 6 cut(s) 85, 322, 613, 641, 656, 677
BtsIMutI CAGTG 5 cut(s) 414, 660, 688, 919, 1576
BveI ACCTGC 1 cut(s) 290
Cac8I GCNNGC 2 cut(s) 32, 1140
CaiI CAGNNNCTG 1 cut(s) 137
CciI TCATGA 1 cut(s) 243
CfoI GCGC 1 cut(s) 1025
Cfr10I RCCGGY 1 cut(s) 1070
Cfr13I GGNCC 2 cut(s) 1199, 1394
Csp6I GTAC 3 cut(s) 497, 516, 1389
CspCI CAANNNNNGTGG 2 cut(s) 103, 138
CviAII CATG 5 cut(s) 244, 331, 1187, 1294, 1418
CviQI GTAC 3 cut(s) 497, 516, 1389
DdeI CTNAG 7 cut(s) 53, 130, 537, 689, 911, 1066, 1103
DpnI GATC 8 cut(s) 111, 242, 379, 484, 586, 972, 1030, 1384
DpnII GATC 8 cut(s) 109, 240, 377, 482, 584, 970, 1028, 1382
DraI TTTAAA 1 cut(s) 838
Eam1104I CTCTTC 5 cut(s) 3, 103, 189, 216, 898
EarI CTCTTC 5 cut(s) 3, 103, 189, 216, 898
EciI GGCGGA 1 cut(s) 61
Ecl136II GAGCTC 1 cut(s) 34
Eco130I CCWWGG 1 cut(s) 1186
Eco24I GRGCYC 2 cut(s) 36, 209
Eco32I GATATC 1 cut(s) 43
Eco47I GGWCC 2 cut(s) 1199, 1394
Eco47III AGCGCT 1 cut(s) 1024
Eco53kI GAGCTC 1 cut(s) 34
Eco57I CTGAAG 2 cut(s) 609, 840
EcoICRI GAGCTC 1 cut(s) 34
EcoRII CCWGG 2 cut(s) 574, 650
EcoRV GATATC 1 cut(s) 43
EcoT14I CCWWGG 1 cut(s) 1186
EcoT38I GRGCYC 2 cut(s) 36, 209
ErhI CCWWGG 1 cut(s) 1186
Esp3I CGTCTC 1 cut(s) 1069
FaeI CATG 5 cut(s) 247, 334, 1190, 1297, 1421
FalI AAGNNNNNCTT 4 cut(s) 256, 288, 973, 1005
FaqI GGGAC 4 cut(s) 290, 1323, 1416, 1450
FatI CATG 5 cut(s) 243, 330, 1186, 1293, 1417
FblI GTMKAC 1 cut(s) 395
Fnu4HI GCNGC 3 cut(s) 453, 1360, 1488
FokI GGATG 6 cut(s) 92, 329, 600, 628, 643, 664
FriOI GRGCYC 2 cut(s) 36, 209
Fsp4HI GCNGC 3 cut(s) 453, 1360, 1488
FspBI CTAG 6 cut(s) 327, 501, 521, 531, 1032, 1110
GlaI GCGC 1 cut(s) 1024
GluI GCNGC 3 cut(s) 453, 1360, 1488
GsuI CTGGAG 1 cut(s) 43
HaeII RGCGCY 1 cut(s) 1026
HaeIII GGCC 3 cut(s) 574, 655, 676
HapII CCGG 3 cut(s) 314, 1071, 1397
HhaI GCGC 1 cut(s) 1025
Hin1II CATG 5 cut(s) 247, 334, 1190, 1297, 1421
Hin6I GCGC 1 cut(s) 1023
HinP1I GCGC 1 cut(s) 1023
HincII GTYRAC 2 cut(s) 924, 1117
HindII GTYRAC 2 cut(s) 924, 1117
HindIII AAGCTT 1 cut(s) 1541
HinfI GANTC 6 cut(s) 386, 666, 687, 742, 1130, 1311
HpaII CCGG 3 cut(s) 314, 1071, 1397
HphI GGTGA 4 cut(s) 283, 1125, 1202, 1527
Hpy166II GTNNAC 6 cut(s) 350, 396, 518, 686, 924, 1117
Hpy188I TCNGA 7 cut(s) 60, 133, 538, 628, 975, 1129, 1239
Hpy188III TCNNGA 8 cut(s) 107, 244, 362, 431, 780, 795, 1032, 1433
Hpy8I GTNNAC 6 cut(s) 350, 396, 518, 686, 924, 1117
Hpy99I CGWCG 1 cut(s) 41
HpyAV CCTTC 5 cut(s) 7, 220, 595, 951, 1293
HpyCH4III ACNGT 3 cut(s) 324, 418, 1199
HpyCH4IV ACGT 2 cut(s) 850, 1099
HpyCH4V TGCA 7 cut(s) 299, 373, 414, 455, 1367, 1460, 1574
HpyF3I CTNAG 7 cut(s) 53, 130, 537, 689, 911, 1066, 1103
HpySE526I ACGT 2 cut(s) 850, 1099
Hsp92II CATG 5 cut(s) 247, 334, 1190, 1297, 1421
HspAI GCGC 1 cut(s) 1023
Kzo9I GATC 8 cut(s) 109, 240, 377, 482, 584, 970, 1028, 1382
LguI GCTCTTC 1 cut(s) 898
LmnI GCTCC 3 cut(s) 229, 1349, 1421
Lsp1109I GCAGC 3 cut(s) 439, 1371, 1499
LweI GCATC 2 cut(s) 439, 622
MaeI CTAG 6 cut(s) 327, 501, 521, 531, 1032, 1110
MaeII ACGT 2 cut(s) 850, 1099
MaeIII GTNAC 2 cut(s) 407, 1169
MalI GATC 8 cut(s) 111, 242, 379, 484, 586, 972, 1030, 1384
MboI GATC 8 cut(s) 109, 240, 377, 482, 584, 970, 1028, 1382
MflI RGATCY 2 cut(s) 1028, 1382
MhlI GDGCHC 2 cut(s) 36, 209
MluCI AATT 6 cut(s) 181, 434, 789, 875, 1243, 1439
MlyI GAGTC 4 cut(s) 395, 660, 681, 1305
MmeI TCCRAC 1 cut(s) 1229
MroXI GAANNNNTTC 1 cut(s) 988
MseI TTAA 4 cut(s) 837, 878, 980, 1050
MspA1I CMGCKG 2 cut(s) 356, 1490
MspI CCGG 3 cut(s) 314, 1071, 1397
MspR9I CCNGG 2 cut(s) 576, 652
MvaI CCWGG 2 cut(s) 576, 652
MvnI CGCG 1 cut(s) 1138
NcoI CCATGG 1 cut(s) 1186
NdeII GATC 8 cut(s) 109, 240, 377, 482, 584, 970, 1028, 1382
NlaIII CATG 5 cut(s) 247, 334, 1190, 1297, 1421
NlaIV GGNNCC 3 cut(s) 231, 312, 1384
NmeAIII GCCGAG 2 cut(s) 100, 1508
NmuCI GTSAC 1 cut(s) 407
PagI TCATGA 1 cut(s) 243
PaqCI CACCTGC 1 cut(s) 290
PciSI GCTCTTC 1 cut(s) 898
PdmI GAANNNNTTC 1 cut(s) 988
PfeI GAWTC 2 cut(s) 742, 1130
PflMI CCANNNNNTGG 4 cut(s) 662, 683, 1000, 1334
PkrI GCNGC 3 cut(s) 454, 1361, 1489
PleI GAGTC 4 cut(s) 394, 660, 681, 1305
PpsI GAGTC 4 cut(s) 394, 660, 681, 1305
PshAI GACNNNNGTC 1 cut(s) 153
Psp124BI GAGCTC 1 cut(s) 36
Psp6I CCWGG 2 cut(s) 574, 650
PspGI CCWGG 2 cut(s) 574, 650
PspN4I GGNNCC 3 cut(s) 231, 312, 1384
PspPI GGNCC 2 cut(s) 1199, 1394
PstNI CAGNNNCTG 1 cut(s) 137
PsuI RGATCY 2 cut(s) 1028, 1382
RsaI GTAC 3 cut(s) 498, 517, 1390
RsaNI GTAC 3 cut(s) 497, 516, 1389
SacI GAGCTC 1 cut(s) 36
SapI GCTCTTC 1 cut(s) 898
SaqAI TTAA 4 cut(s) 837, 878, 980, 1050
SatI GCNGC 3 cut(s) 453, 1360, 1488
Sau3AI GATC 8 cut(s) 109, 240, 377, 482, 584, 970, 1028, 1382
Sau96I GGNCC 2 cut(s) 1199, 1394
SchI GAGTC 4 cut(s) 395, 660, 681, 1305
ScrFI CCNGG 2 cut(s) 576, 652
SduI GDGCHC 2 cut(s) 36, 209
SfaNI GCATC 2 cut(s) 439, 622
SfcI CTRYAG 1 cut(s) 825
SinI GGWCC 2 cut(s) 1199, 1394
Sse9I AATT 6 cut(s) 181, 434, 789, 875, 1243, 1439
SsiI CCGC 5 cut(s) 72, 356, 927, 1136, 1490
SspMI CTAG 6 cut(s) 327, 501, 521, 531, 1032, 1110
SstI GAGCTC 1 cut(s) 36
StyD4I CCNGG 2 cut(s) 574, 650
StyI CCWWGG 1 cut(s) 1186
TaaI ACNGT 3 cut(s) 324, 418, 1199
TaiI ACGT 2 cut(s) 853, 1102
TaqI TCGA 3 cut(s) 36, 108, 805
TasI AATT 6 cut(s) 181, 434, 789, 875, 1243, 1439
TatI WGTACW 2 cut(s) 515, 1388
TfiI GAWTC 2 cut(s) 742, 1130
Tru1I TTAA 4 cut(s) 837, 878, 980, 1050
Tru9I TTAA 4 cut(s) 837, 878, 980, 1050
TscAI CASTG 5 cut(s) 421, 667, 688, 919, 1576
TseFI GTSAC 1 cut(s) 407
TseI GCWGC 3 cut(s) 452, 1359, 1487
Tsp45I GTSAC 1 cut(s) 407
TspDTI ATGAA 7 cut(s) 207, 260, 333, 563, 888, 1313, 1452
TspGWI ACGGA 2 cut(s) 1304, 1362
TspRI CASTG 5 cut(s) 421, 667, 688, 919, 1576
Van91I CCANNNNNTGG 4 cut(s) 662, 683, 1000, 1334
VpaK11BI GGWCC 2 cut(s) 1199, 1394
XapI RAATTY 2 cut(s) 434, 1439
XbaI TCTAGA 1 cut(s) 1031
XmiI GTMKAC 1 cut(s) 395
XmnI GAANNNNTTC 1 cut(s) 988
XspI CTAG 6 cut(s) 327, 501, 521, 531, 1032, 1110
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.