AT2G40580

Mitogen-Activated Protein Kinase Kinase Kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Forward (+)
16943864 .. 16945003
1140 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G40580.1

Sequence Viewer

Length: 936 bp
ATGGAGATTATCGAAGATCTAAAAGAGTCTTCATTGGAGACTGTCAGTGTTCTTGGCAAATTAGGTACCTTCGGCTTTGTGTCTCTCCAGAGTGATTCAAACTTAGGGAAATCATACGTCAAGAAGACAAGTACTCTCGAACAGTCCAAGAATCTCGAGAAGGAGCTCAGGATCATGCTTCGTTTCCACAACAATCCCTTCATAGTCCGAGCTTCAAGCGATCATCTTCACTTTGCGACTAACACCAAAAGCATGAGTTTGTGTTACATCTACATGGAGTATGCTTCCTTAGGGAATCTCAACAAGATGATCTCTGATGCCGGAGGGAGATTGTCTGAAGATAGTGTCAGACGTGCCACTCGTATGATCCTACAAGGACTCAAGGCTCTTCACTCTGAAGGTTTTGTCCACTGCGACCTCAAGCCATCAAATGTACTTGTCTTCCCTTCCAACACACGTGGAGAGCCATGGGATCTCAAGCTTGCTGGTTTCGGTTTATCCAAAGAGCCTACTATGGACTCTAGCTTGTTGTTTCCTGGAACCCTTGAGGAGTACATGTCGCCTGAGGCCATTGAGCGGGACAGGTTTGTTGGGAAGGACAAACTGATCGGACCAGCCCGTGATATATGGTCTCTAGGACGTATTGTTCTTAGGATGTTTGGGGGTATTCCTGTTGAGGTGAGAGGCTCTAACACATGGAGGCTGTACGAAGATATCTCTCCGGAGGCCACAGACTTTGTTAGGCGGTGCTTGGCATGGCGCCCTTCGAATCGGGCCACCGTGGATGAGCTCTTAGACCATCCTTTTGCTGCTGAAAAACTTCCATTGCTTCTTTCTTTCTTAAGGGTTCCTTCTTTCGTAAGAAGGAATGTCAATGAAAAATTGAATGTTAGACAAGAAGAACTGATTCCAAAGCCTCAAGGCTTGCTCTGGTGA

Protein Analysis

311

Amino Acids

35.25

Weight (kDa)

8.35

Isoelectric Point (pI)

54.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 15 - 269 2.6e-38 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 40 - 224 1.9e-13 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0023771)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G40500 AT2G40560 AT2G40580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 65
AccB1I GGYRCC 2 cut(s) 65, 759
AccBSI CCGCTC 1 cut(s) 577
AccIII TCCGGA 1 cut(s) 721
AciI CCGC 2 cut(s) 577, 745
AclWI GGATC 3 cut(s) 179, 361, 480
AcuI CTGAAG 2 cut(s) 357, 417
AcvI CACGTG 1 cut(s) 458
AcyI GRCGYC 1 cut(s) 760
AfaI GTAC 5 cut(s) 67, 133, 435, 554, 707
AfiI CCNNNNNNNGG 1 cut(s) 576
AflII CTTAAG 1 cut(s) 841
AflIII ACRYGT 2 cut(s) 455, 555
AgsI TTSAA 3 cut(s) 99, 216, 886
AjiI CACGTC 1 cut(s) 353
AjnI CCWGG 1 cut(s) 535
AloI GAACNNNNNNTCC 2 cut(s) 630, 662
AluBI AGCT 5 cut(s) 166, 212, 481, 525, 790
AluI AGCT 5 cut(s) 166, 212, 481, 525, 790
Alw21I GWGCWC 2 cut(s) 168, 792
Alw26I GTCTC 3 cut(s) 32, 87, 636
AlwI GGATC 3 cut(s) 179, 361, 480
Ama87I CYCGRG 1 cut(s) 155
Aor13HI TCCGGA 1 cut(s) 721
AoxI GGCC 3 cut(s) 567, 726, 774
ApeKI GCWGC 1 cut(s) 809
ArsI GACNNNNNNTTYG 2 cut(s) 788, 820
Asp700I GAANNNNTTC 2 cut(s) 819, 906
Asp718I GGTACC 1 cut(s) 65
AspLEI GCGC 1 cut(s) 762
AspS9I GGNCC 2 cut(s) 611, 774
AsuHPI GGTGA 1 cut(s) 691
AsuII TTCGAA 1 cut(s) 767
AvaI CYCGRG 1 cut(s) 155
AvaII GGWCC 1 cut(s) 611
AxyI CCTNAGG 2 cut(s) 289, 564
BanI GGYRCC 2 cut(s) 65, 759
BanII GRGCYC 2 cut(s) 168, 792
BbrPI CACGTG 1 cut(s) 458
BbsI GAAGAC 3 cut(s) 21, 131, 433
Bbv12I GWGCWC 2 cut(s) 168, 792
BbvI GCAGC 1 cut(s) 796
BccI CCATC 2 cut(s) 433, 807
BciT130I CCWGG 1 cut(s) 537
BcoDI GTCTC 3 cut(s) 32, 87, 636
BfaI CTAG 2 cut(s) 522, 635
BfoI RGCGCY 1 cut(s) 763
BfrI CTTAAG 1 cut(s) 841
BglII AGATCT 1 cut(s) 16
BisI GCNGC 1 cut(s) 810
BlsI GCNGC 1 cut(s) 811
BmcAI AGTACT 1 cut(s) 133
Bme1390I CCNGG 1 cut(s) 537
Bme18I GGWCC 1 cut(s) 611
BmeT110I CYCGRG 1 cut(s) 155
BmgBI CACGTC 1 cut(s) 353
BmgT120I GGNCC 2 cut(s) 611, 774
BmiI GGNNCC 4 cut(s) 67, 541, 761, 849
BmrFI CCNGG 1 cut(s) 537
BmsI GCATC 1 cut(s) 307
BpiI GAAGAC 3 cut(s) 21, 131, 433
BpmI CTGGAG 1 cut(s) 71
Bpu10I CCTNAGC 1 cut(s) 167
Bpu14I TTCGAA 1 cut(s) 767
BpuEI CTTGAG 5 cut(s) 365, 404, 461, 566, 903
BsaAI YACGTR 1 cut(s) 458
BsaHI GRCGYC 1 cut(s) 760
BsaI GGTCTC 1 cut(s) 636
BsaJI CCNNGG 2 cut(s) 467, 780
BsaWI WCCGGW 1 cut(s) 721
BsaXI ACNNNNNCTCC 2 cut(s) 542, 572
Bsc4I CCNNNNNNNGG 1 cut(s) 576
Bse21I CCTNAGG 2 cut(s) 289, 564
Bse3DI GCAATG 1 cut(s) 824
BseAI TCCGGA 1 cut(s) 721
BseBI CCWGG 1 cut(s) 537
BseDI CCNNGG 2 cut(s) 467, 780
BseGI GGATG 3 cut(s) 660, 790, 799
BseLI CCNNNNNNNGG 1 cut(s) 576
BseMI GCAATG 1 cut(s) 824
BseMII CTCAG 2 cut(s) 181, 555
BseRI GAGGAG 1 cut(s) 563
BseXI GCAGC 1 cut(s) 796
BshFI GGCC 3 cut(s) 569, 728, 776
BshNI GGYRCC 2 cut(s) 65, 759
BsiHKAI GWGCWC 2 cut(s) 168, 792
BsiHKCI CYCGRG 1 cut(s) 155
BsiSI CCGG 2 cut(s) 321, 722
BslFI GGGAC 1 cut(s) 593
BslI CCNNNNNNNGG 1 cut(s) 576
BsmAI GTCTC 3 cut(s) 32, 87, 636
BsmFI GGGAC 1 cut(s) 593
BsnI GGCC 3 cut(s) 569, 728, 776
Bso31I GGTCTC 1 cut(s) 636
BsoBI CYCGRG 1 cut(s) 155
Bsp119I TTCGAA 1 cut(s) 767
Bsp1286I GDGCHC 2 cut(s) 168, 792
Bsp13I TCCGGA 1 cut(s) 721
Bsp143I GATC 7 cut(s) 16, 171, 220, 309, 366, 472, 606
Bsp19I CCATGG 1 cut(s) 467
BspACI CCGC 2 cut(s) 577, 745
BspANI GGCC 3 cut(s) 569, 728, 776
BspCNI CTCAG 2 cut(s) 180, 556
BspEI TCCGGA 1 cut(s) 721
BspLI GGNNCC 4 cut(s) 67, 541, 761, 849
BspPI GGATC 3 cut(s) 179, 361, 480
BspQI GCTCTTC 1 cut(s) 393
BspT104I TTCGAA 1 cut(s) 767
BspT107I GGYRCC 2 cut(s) 65, 759
BspTI CTTAAG 1 cut(s) 841
BspTNI GGTCTC 1 cut(s) 636
BsrBI CCGCTC 1 cut(s) 577
BsrDI GCAATG 1 cut(s) 824
BssECI CCNNGG 2 cut(s) 467, 780
BssMI GATC 7 cut(s) 16, 171, 220, 309, 366, 472, 606
BssNI GRCGYC 1 cut(s) 760
BssT1I CCWWGG 1 cut(s) 467
Bst2UI CCWGG 1 cut(s) 537
Bst4CI ACNGT 3 cut(s) 43, 144, 781
Bst6I CTCTTC 1 cut(s) 393
BstACI GRCGYC 1 cut(s) 760
BstAFI CTTAAG 1 cut(s) 841
BstBAI YACGTR 1 cut(s) 458
BstBI TTCGAA 1 cut(s) 767
BstC8I GCNNGC 2 cut(s) 483, 926
BstDEI CTNAG 6 cut(s) 103, 167, 289, 564, 650, 793
BstDSI CCRYGG 2 cut(s) 467, 780
BstF5I GGATG 3 cut(s) 660, 790, 799
BstH2I RGCGCY 1 cut(s) 763
BstHHI GCGC 1 cut(s) 762
BstKTI GATC 7 cut(s) 19, 174, 223, 312, 369, 475, 609
BstMAI GTCTC 3 cut(s) 32, 87, 636
BstMBI GATC 7 cut(s) 16, 171, 220, 309, 366, 472, 606
BstNI CCWGG 1 cut(s) 537
BstNSI RCATGY 1 cut(s) 559
BstSCI CCNGG 1 cut(s) 535
BstV1I GCAGC 1 cut(s) 796
BstV2I GAAGAC 3 cut(s) 21, 131, 433
BstX2I RGATCY 2 cut(s) 16, 472
BstYI RGATCY 2 cut(s) 16, 472
Bsu36I CCTNAGG 2 cut(s) 289, 564
BsuRI GGCC 3 cut(s) 569, 728, 776
BtgI CCRYGG 2 cut(s) 467, 780
BtrI CACGTC 1 cut(s) 353
BtsCI GGATG 3 cut(s) 660, 790, 799
BtsI GCAGTG 1 cut(s) 409
BtsIMutI CAGTG 2 cut(s) 52, 409
Cac8I GCNNGC 2 cut(s) 483, 926
CfoI GCGC 1 cut(s) 762
Cfr13I GGNCC 2 cut(s) 611, 774
Csp6I GTAC 5 cut(s) 66, 132, 434, 553, 706
CspCI CAANNNNNGTGG 4 cut(s) 439, 474, 718, 753
CviAII CATG 7 cut(s) 175, 253, 274, 468, 556, 696, 756
CviQI GTAC 5 cut(s) 66, 132, 434, 553, 706
DdeI CTNAG 6 cut(s) 103, 167, 289, 564, 650, 793
DinI GGCGCC 1 cut(s) 761
DpnI GATC 7 cut(s) 18, 173, 222, 311, 368, 474, 608
DpnII GATC 7 cut(s) 16, 171, 220, 309, 366, 472, 606
Eam1104I CTCTTC 1 cut(s) 393
EarI CTCTTC 1 cut(s) 393
Ecl136II GAGCTC 2 cut(s) 166, 790
Eco130I CCWWGG 1 cut(s) 467
Eco24I GRGCYC 2 cut(s) 168, 792
Eco31I GGTCTC 1 cut(s) 636
Eco32I GATATC 1 cut(s) 715
Eco47I GGWCC 1 cut(s) 611
Eco53kI GAGCTC 2 cut(s) 166, 790
Eco57I CTGAAG 2 cut(s) 357, 417
Eco72I CACGTG 1 cut(s) 458
Eco81I CCTNAGG 2 cut(s) 289, 564
Eco88I CYCGRG 1 cut(s) 155
EcoICRI GAGCTC 2 cut(s) 166, 790
EcoRII CCWGG 1 cut(s) 535
EcoRV GATATC 1 cut(s) 715
EcoT14I CCWWGG 1 cut(s) 467
EcoT38I GRGCYC 2 cut(s) 168, 792
EgeI GGCGCC 1 cut(s) 761
EheI GGCGCC 1 cut(s) 761
ErhI CCWWGG 1 cut(s) 467
FaeI CATG 7 cut(s) 178, 256, 277, 471, 559, 699, 759
FalI AAGNNNNNCTT 2 cut(s) 835, 867
FaqI GGGAC 1 cut(s) 593
FatI CATG 7 cut(s) 174, 252, 273, 467, 555, 695, 755
FauI CCCGC 1 cut(s) 570
Fnu4HI GCNGC 1 cut(s) 810
FokI GGATG 3 cut(s) 667, 786, 797
FriOI GRGCYC 2 cut(s) 168, 792
Fsp4HI GCNGC 1 cut(s) 810
FspBI CTAG 2 cut(s) 522, 635
GlaI GCGC 1 cut(s) 761
GluI GCNGC 1 cut(s) 810
GsuI CTGGAG 1 cut(s) 71
HaeII RGCGCY 1 cut(s) 763
HaeIII GGCC 3 cut(s) 569, 728, 776
HapII CCGG 2 cut(s) 321, 722
HhaI GCGC 1 cut(s) 762
Hin1I GRCGYC 1 cut(s) 760
Hin1II CATG 7 cut(s) 178, 256, 277, 471, 559, 699, 759
Hin6I GCGC 1 cut(s) 760
HinP1I GCGC 1 cut(s) 760
HindIII AAGCTT 1 cut(s) 479
HinfI GANTC 8 cut(s) 26, 95, 151, 295, 378, 518, 769, 907
HpaII CCGG 2 cut(s) 321, 722
HphI GGTGA 1 cut(s) 691
Hpy166II GTNNAC 1 cut(s) 409
Hpy188I TCNGA 6 cut(s) 209, 316, 337, 350, 397, 611
Hpy188III TCNNGA 7 cut(s) 88, 121, 137, 155, 157, 169, 722
Hpy8I GTNNAC 1 cut(s) 409
HpyAV CCTTC 9 cut(s) 79, 154, 208, 392, 456, 589, 774, 858, 861
HpyCH4III ACNGT 3 cut(s) 43, 144, 781
HpyCH4IV ACGT 4 cut(s) 117, 352, 457, 640
HpyF3I CTNAG 6 cut(s) 103, 167, 289, 564, 650, 793
HpySE526I ACGT 4 cut(s) 117, 352, 457, 640
Hsp92I GRCGYC 1 cut(s) 760
Hsp92II CATG 7 cut(s) 178, 256, 277, 471, 559, 699, 759
HspAI GCGC 1 cut(s) 760
KasI GGCGCC 1 cut(s) 759
Kpn2I TCCGGA 1 cut(s) 721
KpnI GGTACC 1 cut(s) 69
Kzo9I GATC 7 cut(s) 16, 171, 220, 309, 366, 472, 606
LguI GCTCTTC 1 cut(s) 393
LmnI GCTCC 1 cut(s) 163
Lsp1109I GCAGC 1 cut(s) 796
LweI GCATC 1 cut(s) 307
MaeI CTAG 2 cut(s) 522, 635
MaeII ACGT 4 cut(s) 117, 352, 457, 640
MaeIII GTNAC 1 cut(s) 263
MalI GATC 7 cut(s) 18, 173, 222, 311, 368, 474, 608
MbiI CCGCTC 1 cut(s) 577
MboI GATC 7 cut(s) 16, 171, 220, 309, 366, 472, 606
MboII GAAGA 9 cut(s) 21, 26, 136, 218, 350, 380, 433, 722, 911
MflI RGATCY 2 cut(s) 16, 472
MhlI GDGCHC 2 cut(s) 168, 792
MluCI AATT 2 cut(s) 59, 881
Mly113I GGCGCC 1 cut(s) 760
MlyI GAGTC 3 cut(s) 35, 372, 512
MmeI TCCRAC 1 cut(s) 474
MnlI CCTC 9 cut(s) 317, 428, 541, 559, 670, 677, 693, 718, 927
MroI TCCGGA 1 cut(s) 721
MroXI GAANNNNTTC 2 cut(s) 819, 906
MseI TTAA 1 cut(s) 842
MslI CAYNNNNRTG 2 cut(s) 272, 362
MspCI CTTAAG 1 cut(s) 841
MspI CCGG 2 cut(s) 321, 722
MspR9I CCNGG 1 cut(s) 537
MvaI CCWGG 1 cut(s) 537
NarI GGCGCC 1 cut(s) 760
NcoI CCATGG 1 cut(s) 467
NdeII GATC 7 cut(s) 16, 171, 220, 309, 366, 472, 606
NlaIII CATG 7 cut(s) 178, 256, 277, 471, 559, 699, 759
NlaIV GGNNCC 4 cut(s) 67, 541, 761, 849
NspI RCATGY 1 cut(s) 559
NspV TTCGAA 1 cut(s) 767
PaeR7I CTCGAG 1 cut(s) 155
PciI ACATGT 1 cut(s) 555
PciSI GCTCTTC 1 cut(s) 393
PcsI WCGNNNNNNNCGW 1 cut(s) 358
PdmI GAANNNNTTC 2 cut(s) 819, 906
PfeI GAWTC 5 cut(s) 95, 151, 295, 769, 907
PfoI TCCNGGA 1 cut(s) 535
PkrI GCNGC 1 cut(s) 811
PleI GAGTC 3 cut(s) 34, 372, 512
PluTI GGCGCC 1 cut(s) 763
PmaCI CACGTG 1 cut(s) 458
PmlI CACGTG 1 cut(s) 458
PpsI GAGTC 3 cut(s) 34, 372, 512
Ppu21I YACGTR 1 cut(s) 458
PscI ACATGT 1 cut(s) 555
Psp124BI GAGCTC 2 cut(s) 168, 792
Psp6I CCWGG 1 cut(s) 535
PspCI CACGTG 1 cut(s) 458
PspGI CCWGG 1 cut(s) 535
PspN4I GGNNCC 4 cut(s) 67, 541, 761, 849
PspPI GGNCC 2 cut(s) 611, 774
PsuI RGATCY 2 cut(s) 16, 472
RsaI GTAC 5 cut(s) 67, 133, 435, 554, 707
RsaNI GTAC 5 cut(s) 66, 132, 434, 553, 706
RseI CAYNNNNRTG 2 cut(s) 272, 362
SacI GAGCTC 2 cut(s) 168, 792
SapI GCTCTTC 1 cut(s) 393
SaqAI TTAA 1 cut(s) 842
SatI GCNGC 1 cut(s) 810
Sau3AI GATC 7 cut(s) 16, 171, 220, 309, 366, 472, 606
Sau96I GGNCC 2 cut(s) 611, 774
ScaI AGTACT 1 cut(s) 133
SchI GAGTC 3 cut(s) 35, 372, 512
ScrFI CCNGG 1 cut(s) 537
SduI GDGCHC 2 cut(s) 168, 792
SfaNI GCATC 1 cut(s) 307
SfoI GGCGCC 1 cut(s) 761
Sfr274I CTCGAG 1 cut(s) 155
SfuI TTCGAA 1 cut(s) 767
SinI GGWCC 1 cut(s) 611
SlaI CTCGAG 1 cut(s) 155
SmiMI CAYNNNNRTG 2 cut(s) 272, 362
SmlI CTYRAG 7 cut(s) 155, 380, 419, 476, 545, 841, 918
SmoI CTYRAG 7 cut(s) 155, 380, 419, 476, 545, 841, 918
Sse9I AATT 2 cut(s) 59, 881
SsiI CCGC 2 cut(s) 577, 745
SspDI GGCGCC 1 cut(s) 759
SspMI CTAG 2 cut(s) 522, 635
SstI GAGCTC 2 cut(s) 168, 792
StyD4I CCNGG 1 cut(s) 535
StyI CCWWGG 1 cut(s) 467
TaaI ACNGT 3 cut(s) 43, 144, 781
TaiI ACGT 4 cut(s) 120, 355, 460, 643
TaqI TCGA 4 cut(s) 12, 138, 156, 767
TasI AATT 2 cut(s) 59, 881
TatI WGTACW 3 cut(s) 131, 433, 552
TfiI GAWTC 5 cut(s) 95, 151, 295, 769, 907
Tru1I TTAA 1 cut(s) 842
Tru9I TTAA 1 cut(s) 842
TscAI CASTG 2 cut(s) 52, 416
TseI GCWGC 1 cut(s) 809
TspDTI ATGAA 3 cut(s) 21, 190, 891
TspRI CASTG 2 cut(s) 52, 416
Vha464I CTTAAG 1 cut(s) 841
VpaK11BI GGWCC 1 cut(s) 611
XceI RCATGY 1 cut(s) 559
XhoI CTCGAG 1 cut(s) 155
XmnI GAANNNNTTC 2 cut(s) 819, 906
XspI CTAG 2 cut(s) 522, 635
ZrmI AGTACT 1 cut(s) 133
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.