AT2G43420

3-beta hydroxysteroid dehydrogenase isomerase family protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
18031268 .. 18035182
3915 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G43420.1

Sequence Viewer

Length: 1686 bp
ATGGACGAAGATTCCGTCCATGGCGATTCTCACCTCAAGACATGTGTCGTCCTCGGCGGACGAGGGTTCATTGGTCGATCGCTTGTCTCCAGATTGCTTCGTCTCGGAAACTGGACAGTCCGAGTCGCAGATTCCGGTCACACTCTCCATCTTGATGAATCCGATTCGCTCCTCGAGGATGCTCTCTCCTCCGGCCGCGCTTCTTATCACTGCGTCGATGTTCGTGATAAACCTCAGATCGTTAAAGTTACCGAGGGTTCCTATGTTGTATTTTACATGGGAGCTACTGATTTACGTTCCCATGATTACTTTGACTGCTACAAGGTTATAGTTCAAGGTACAAGAAATGTGATTTCTGCCTGTCGTGAATCTGGAGTCAGAAAACTTATCTACAACAGTACAGCTGATGTTGTTTTTGATGGTTCCCAACCTATACGTGATGGTGATGAATCCTTGAGACGTCCTTTGAAGTTCCAATCTATGTTGACAGACTTCAAAGCTCAAGCAGAAGCGTTGATCAAATTGGCTAACAACCGAGATGGTCTCTTAACTTGTGCACTTCGCTCTAGCATTGTATTTGGACCTGGTGACACAGAGTTTGTACCTTTTTTGGTGAATCTAGCCAAGTCCGGATATGCAAAGTTTATACTCGGGAGTGGTGAAAATATCTCTGATTTCACTTACTCGGAGAACGTTTCTCATGCACATATTTGCGCCGTTAAAGCATTAGATTCACAGATGGAGTTTGTGGCTGGAAAGGAATTTTTTATCACAAACCTCAAGCCGGTCAGATTTTGGGACTTTGTAAGCCATATAGTTGAAGGTCTGGGATACCCAAGACCATCCATTAAACTTCCTGTTCGGCTGGTTTTGTATGTTTTCTCACTTCTTAAGTGGACACATGAAAAGGAGGGCCTTGGGAGTAATTATGACACAGCACATCAGTATGCTCTGTTAGCTTCATCAACGAGAACTTTTAACTGCAATGCAGCTAAGAAGCATCTTGGTTACACACCTGTTGTGACACTTGAAGATGGTATTGCATCAACGCTTCAATGGTTCTCTCGGGATCTTGAGAAGTCTGATGACACAATCATTCAATCTACTGCAGATCAGCTTCTTGGTTGTGGGAAAGTTGCAGACATCTTGCTGTGGAGAAATGAGAAGAAAACCTTCGTTTCTTTTCTTGTCCTAAACTTGTTTTATTACTGGTTCTTCTTTTCTGGAAACACATTTACTTCATCTGCAGCCCAACTTCTGTTTATATTTGCTGTTGCTCTCTATGGAGTCTCTTTTGTGCCGTCAAAGATTTTCGGGTTTCAAGTCAACAAAATACCCCCATGGAGATTTGAGATCTCCGAATCCGCTGTGAGAGATCTTAGTAGTGATATCGTAGTTGTCTGGAATCAAGGAGTTCGCAGTTTTAAATCCTTAAGCAGTGGAGGAGACTGGATCAAGTTCTTCAAGATTGCAGGATCACTGTATCTCCTCAAACTGATTGTATCCCGTTCATTGGCAGCATTTCTTTTCACAGTTATGTCGTTCTCATTCACCGGTTTCTTCATCTACGAGCAATACGAGCTTGAGCTCTACCACCTAGCCCGGATATTCGTCGAATGCTTAACATTTATTAAAAGGATGGTGATACCTGTTTCTGATGCTTCATCTAAACCAATGTTCATGTGA
Functional Annotation

Protein Analysis

561

Amino Acids

63.03

Weight (kDa)

7.59

Isoelectric Point (pI)

34.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
3Beta_HSD PF01073 16 - 287 1.3e-92 3-beta hydroxysteroid dehydrogenase/isomerase family
Epimerase PF01370 16 - 245 2.6e-24 NAD dependent epimerase/dehydratase family
GDP_Man_Dehyd PF16363 17 - 242 1e-07 GDP-mannose 4,6 dehydratase
RmlD_sub_bind PF04321 17 - 211 5.8e-06 RmlD substrate binding domain
NAD_binding_10 PF13460 19 - 172 4.4e-07 NAD(P)H-binding
Reticulon PF02453 379 - 534 8.3e-29 Reticulon
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 463
AbsI CCTCGAGG 1 cut(s) 173
AccII CGCG 1 cut(s) 198
AccIII TCCGGA 1 cut(s) 629
AciI CCGC 3 cut(s) 57, 196, 1365
AclI AACGTT 1 cut(s) 693
AclWI GGATC 3 cut(s) 1077, 1460, 1483
AcoI YGGCCR 1 cut(s) 193
AcsI RAATTY 1 cut(s) 761
AcyI GRCGYC 1 cut(s) 460
AfaI GTAC 3 cut(s) 340, 400, 603
AfiI CCNNNNNNNGG 2 cut(s) 784, 1513
AflII CTTAAG 2 cut(s) 890, 1432
AflIII ACRYGT 1 cut(s) 41
AgeI ACCGGT 1 cut(s) 1553
AgsI TTSAA 9 cut(s) 335, 469, 496, 821, 1031, 1055, 1100, 1322, 1465
AjnI CCWGG 1 cut(s) 583
AluBI AGCT 8 cut(s) 284, 404, 500, 959, 992, 1117, 1582, 1588
AluI AGCT 8 cut(s) 284, 404, 500, 959, 992, 1117, 1582, 1588
Alw21I GWGCWC 2 cut(s) 559, 1590
Alw26I GTCTC 6 cut(s) 91, 107, 451, 548, 1294, 1440
Alw44I GTGCAC 1 cut(s) 555
AlwI GGATC 3 cut(s) 1077, 1460, 1483
Ama87I CYCGRG 3 cut(s) 173, 650, 1065
Aor13HI TCCGGA 1 cut(s) 629
AoxI GGCC 2 cut(s) 193, 913
ApaLI GTGCAC 1 cut(s) 555
ApeKI GCWGC 3 cut(s) 989, 1247, 1517
ApoI RAATTY 1 cut(s) 761
ArsI GACNNNNNNTTYG 3 cut(s) 32, 581, 613
AsiGI ACCGGT 1 cut(s) 1553
Asp700I GAANNNNTTC 1 cut(s) 1172
AspLEI GCGC 2 cut(s) 200, 716
AspS9I GGNCC 2 cut(s) 581, 913
AsuC2I CCSGG 1 cut(s) 1603
AsuHPI GGTGA 7 cut(s) 23, 455, 599, 625, 671, 1543, 1654
AvaI CYCGRG 3 cut(s) 173, 650, 1065
AvaII GGWCC 1 cut(s) 581
BaeGI GKGCMC 1 cut(s) 559
BanII GRGCYC 1 cut(s) 1590
Bbv12I GWGCWC 2 cut(s) 559, 1590
BbvI GCAGC 3 cut(s) 1001, 1259, 1529
BccI CCATC 8 cut(s) 156, 413, 434, 533, 733, 850, 1028, 1633
BceAI ACGGC 2 cut(s) 701, 1285
BciT130I CCWGG 1 cut(s) 585
BciVI GTATCC 2 cut(s) 824, 1513
BclI TGATCA 1 cut(s) 516
BcnI CCSGG 1 cut(s) 1603
BcoDI GTCTC 6 cut(s) 91, 107, 451, 548, 1294, 1440
BfaI CTAG 3 cut(s) 567, 620, 1598
BfmI CTRYAG 2 cut(s) 1107, 1245
BfrI CTTAAG 2 cut(s) 890, 1432
BfuI GTATCC 2 cut(s) 824, 1513
BglII AGATCT 2 cut(s) 1353, 1375
BisI GCNGC 4 cut(s) 196, 990, 1248, 1518
BlsI GCNGC 4 cut(s) 197, 991, 1249, 1519
Bme1390I CCNGG 2 cut(s) 585, 1603
Bme18I GGWCC 1 cut(s) 581
BmeT110I CYCGRG 3 cut(s) 173, 650, 1065
BmgT120I GGNCC 2 cut(s) 581, 913
BmiI GGNNCC 2 cut(s) 259, 424
BmrFI CCNGG 2 cut(s) 585, 1603
BmsI GCATC 4 cut(s) 169, 1009, 1052, 1648
BoxI GACNNNNGTC 1 cut(s) 44
BplI GAGNNNNNCTC 2 cut(s) 528, 560
BpmI CTGGAG 2 cut(s) 73, 393
BpuEI CTTGAG 6 cut(s) 20, 475, 486, 764, 1094, 1604
BpuMI CCSGG 1 cut(s) 1603
BsaAI YACGTR 1 cut(s) 437
BsaHI GRCGYC 1 cut(s) 460
BsaI GGTCTC 1 cut(s) 548
BsaJI CCNNGG 5 cut(s) 19, 52, 252, 916, 1340
BsaWI WCCGGW 3 cut(s) 134, 629, 1553
BsaXI ACNNNNNCTCC 2 cut(s) 1470, 1500
Bsc4I CCNNNNNNNGG 2 cut(s) 784, 1513
Bse118I RCCGGY 2 cut(s) 784, 1553
Bse1I ACTGG 3 cut(s) 116, 1214, 1454
Bse3DI GCAATG 1 cut(s) 991
BseAI TCCGGA 1 cut(s) 629
BseBI CCWGG 1 cut(s) 585
BseDI CCNNGG 5 cut(s) 19, 52, 252, 916, 1340
BseGI GGATG 3 cut(s) 184, 842, 1644
BseLI CCNNNNNNNGG 2 cut(s) 784, 1513
BseMI GCAATG 1 cut(s) 991
BseMII CTCAG 1 cut(s) 248
BseNI ACTGG 3 cut(s) 116, 1214, 1454
BseRI GAGGAG 4 cut(s) 161, 178, 1458, 1478
BseSI GKGCMC 1 cut(s) 559
BseX3I CGGCCG 1 cut(s) 193
BseXI GCAGC 3 cut(s) 1001, 1259, 1529
Bsh1236I CGCG 1 cut(s) 198
Bsh1285I CGRYCG 2 cut(s) 80, 196
BshFI GGCC 2 cut(s) 195, 915
BshTI ACCGGT 1 cut(s) 1553
BsiEI CGRYCG 2 cut(s) 80, 196
BsiHKAI GWGCWC 2 cut(s) 559, 1590
BsiHKCI CYCGRG 3 cut(s) 173, 650, 1065
BsiSI CCGG 6 cut(s) 135, 192, 630, 785, 1554, 1603
BslFI GGGAC 1 cut(s) 812
BslI CCNNNNNNNGG 2 cut(s) 784, 1513
BsmAI GTCTC 6 cut(s) 91, 107, 451, 548, 1294, 1440
BsmBI CGTCTC 2 cut(s) 107, 451
BsmFI GGGAC 1 cut(s) 812
BsmI GAATGC 1 cut(s) 1622
BsnI GGCC 2 cut(s) 195, 915
Bso31I GGTCTC 1 cut(s) 548
BsoBI CYCGRG 3 cut(s) 173, 650, 1065
Bsp1286I GDGCHC 2 cut(s) 559, 1590
Bsp13I TCCGGA 1 cut(s) 629
Bsp143I GATC 9 cut(s) 77, 237, 516, 1069, 1111, 1353, 1375, 1452, 1475
Bsp19I CCATGG 2 cut(s) 19, 1340
BspACI CCGC 3 cut(s) 57, 196, 1365
BspANI GGCC 2 cut(s) 195, 915
BspCNI CTCAG 1 cut(s) 247
BspEI TCCGGA 1 cut(s) 629
BspFNI CGCG 1 cut(s) 198
BspLI GGNNCC 2 cut(s) 259, 424
BspMAI CTGCAG 2 cut(s) 1111, 1249
BspPI GGATC 3 cut(s) 1077, 1460, 1483
BspTI CTTAAG 2 cut(s) 890, 1432
BspTNI GGTCTC 1 cut(s) 548
BsrDI GCAATG 1 cut(s) 991
BsrFI RCCGGY 2 cut(s) 784, 1553
BsrI ACTGG 3 cut(s) 116, 1214, 1454
BssAI RCCGGY 2 cut(s) 784, 1553
BssECI CCNNGG 5 cut(s) 19, 52, 252, 916, 1340
BssMI GATC 9 cut(s) 77, 237, 516, 1069, 1111, 1353, 1375, 1452, 1475
BssNI GRCGYC 1 cut(s) 460
BssT1I CCWWGG 3 cut(s) 19, 916, 1340
Bst2UI CCWGG 1 cut(s) 585
Bst4CI ACNGT 4 cut(s) 118, 398, 1482, 1534
BstACI GRCGYC 1 cut(s) 460
BstAFI CTTAAG 2 cut(s) 890, 1432
BstBAI YACGTR 1 cut(s) 437
BstDEI CTNAG 3 cut(s) 234, 993, 1379
BstDSI CCRYGG 2 cut(s) 19, 1340
BstF5I GGATG 3 cut(s) 184, 842, 1644
BstFNI CGCG 1 cut(s) 198
BstHHI GCGC 2 cut(s) 200, 716
BstKTI GATC 9 cut(s) 80, 240, 519, 1072, 1114, 1356, 1378, 1455, 1478
BstMAI GTCTC 6 cut(s) 91, 107, 451, 548, 1294, 1440
BstMBI GATC 9 cut(s) 77, 237, 516, 1069, 1111, 1353, 1375, 1452, 1475
BstMCI CGRYCG 2 cut(s) 80, 196
BstMWI GCNNNNNNNGC 3 cut(s) 722, 956, 1579
BstNI CCWGG 1 cut(s) 585
BstNSI RCATGY 1 cut(s) 45
BstPAI GACNNNNGTC 1 cut(s) 44
BstSCI CCNGG 2 cut(s) 583, 1601
BstSFI CTRYAG 2 cut(s) 1107, 1245
BstSLI GKGCMC 1 cut(s) 559
BstUI CGCG 1 cut(s) 198
BstV1I GCAGC 3 cut(s) 1001, 1259, 1529
BstX2I RGATCY 3 cut(s) 1069, 1353, 1375
BstYI RGATCY 3 cut(s) 1069, 1353, 1375
BstZI CGGCCG 1 cut(s) 193
BsuI GTATCC 2 cut(s) 824, 1513
BsuRI GGCC 2 cut(s) 195, 915
BtgI CCRYGG 2 cut(s) 19, 1340
BtsCI GGATG 3 cut(s) 184, 842, 1644
BtsI GCAGTG 2 cut(s) 208, 1444
BtsIMutI CAGTG 3 cut(s) 208, 1444, 1478
CfoI GCGC 2 cut(s) 200, 716
Cfr10I RCCGGY 2 cut(s) 784, 1553
Cfr13I GGNCC 2 cut(s) 581, 913
CseI GACGC 1 cut(s) 202
CsiI ACCWGGT 1 cut(s) 583
Csp6I GTAC 3 cut(s) 339, 399, 602
CspAI ACCGGT 1 cut(s) 1553
CviAII CATG 8 cut(s) 20, 42, 277, 302, 701, 902, 1341, 1681
CviQI GTAC 3 cut(s) 339, 399, 602
DdeI CTNAG 3 cut(s) 234, 993, 1379
DpnI GATC 9 cut(s) 79, 239, 518, 1071, 1113, 1355, 1377, 1454, 1477
DpnII GATC 9 cut(s) 77, 237, 516, 1069, 1111, 1353, 1375, 1452, 1475
DraI TTTAAA 1 cut(s) 1426
EaeI YGGCCR 1 cut(s) 193
EagI CGGCCG 1 cut(s) 193
EciI GGCGGA 1 cut(s) 72
Ecl136II GAGCTC 1 cut(s) 1588
EclXI CGGCCG 1 cut(s) 193
Eco130I CCWWGG 3 cut(s) 19, 916, 1340
Eco24I GRGCYC 1 cut(s) 1590
Eco31I GGTCTC 1 cut(s) 548
Eco32I GATATC 1 cut(s) 1390
Eco47I GGWCC 1 cut(s) 581
Eco52I CGGCCG 1 cut(s) 193
Eco53kI GAGCTC 1 cut(s) 1588
Eco88I CYCGRG 3 cut(s) 173, 650, 1065
EcoICRI GAGCTC 1 cut(s) 1588
EcoO109I RGGNCCY 1 cut(s) 913
EcoRII CCWGG 1 cut(s) 583
EcoRV GATATC 1 cut(s) 1390
EcoT14I CCWWGG 3 cut(s) 19, 916, 1340
EcoT38I GRGCYC 1 cut(s) 1590
ErhI CCWWGG 3 cut(s) 19, 916, 1340
Esp3I CGTCTC 2 cut(s) 107, 451
FaeI CATG 8 cut(s) 23, 45, 280, 305, 704, 905, 1344, 1684
FalI AAGNNNNNCTT 2 cut(s) 1157, 1189
FaqI GGGAC 1 cut(s) 812
FatI CATG 8 cut(s) 19, 41, 276, 301, 700, 901, 1340, 1680
FbaI TGATCA 1 cut(s) 516
Fnu4HI GCNGC 4 cut(s) 196, 990, 1248, 1518
FokI GGATG 3 cut(s) 191, 829, 1651
FriOI GRGCYC 1 cut(s) 1590
Fsp4HI GCNGC 4 cut(s) 196, 990, 1248, 1518
FspBI CTAG 3 cut(s) 567, 620, 1598
GlaI GCGC 2 cut(s) 199, 715
GluI GCNGC 4 cut(s) 196, 990, 1248, 1518
GsuI CTGGAG 2 cut(s) 73, 393
HaeIII GGCC 2 cut(s) 195, 915
HapII CCGG 6 cut(s) 135, 192, 630, 785, 1554, 1603
HgaI GACGC 1 cut(s) 202
HhaI GCGC 2 cut(s) 200, 716
Hin1I GRCGYC 1 cut(s) 460
Hin1II CATG 8 cut(s) 23, 45, 280, 305, 704, 905, 1344, 1684
Hin6I GCGC 2 cut(s) 198, 714
HinP1I GCGC 2 cut(s) 198, 714
HincII GTYRAC 2 cut(s) 486, 1327
HindII GTYRAC 2 cut(s) 486, 1327
HpaII CCGG 6 cut(s) 135, 192, 630, 785, 1554, 1603
HphI GGTGA 7 cut(s) 23, 455, 599, 625, 671, 1543, 1654
Hpy166II GTNNAC 4 cut(s) 486, 557, 897, 1327
Hpy8I GTNNAC 4 cut(s) 486, 557, 897, 1327
Hpy99I CGWCG 2 cut(s) 218, 1616
HpyAV CCTTC 2 cut(s) 815, 1183
HpyCH4III ACNGT 4 cut(s) 118, 398, 1482, 1534
HpyCH4IV ACGT 4 cut(s) 295, 436, 460, 693
HpyF10VI GCNNNNNNNGC 3 cut(s) 722, 956, 1579
HpyF3I CTNAG 3 cut(s) 234, 993, 1379
HpySE526I ACGT 4 cut(s) 295, 436, 460, 693
Hsp92I GRCGYC 1 cut(s) 460
Hsp92II CATG 8 cut(s) 23, 45, 280, 305, 704, 905, 1344, 1684
HspAI GCGC 2 cut(s) 198, 714
Kpn2I TCCGGA 1 cut(s) 629
Ksp22I TGATCA 1 cut(s) 516
Kzo9I GATC 9 cut(s) 77, 237, 516, 1069, 1111, 1353, 1375, 1452, 1475
LmnI GCTCC 2 cut(s) 174, 281
Lsp1109I GCAGC 3 cut(s) 1001, 1259, 1529
LweI GCATC 4 cut(s) 169, 1009, 1052, 1648
MabI ACCWGGT 1 cut(s) 583
MaeI CTAG 3 cut(s) 567, 620, 1598
MaeII ACGT 4 cut(s) 295, 436, 460, 693
MaeIII GTNAC 5 cut(s) 137, 247, 587, 1007, 1021
MalI GATC 9 cut(s) 79, 239, 518, 1071, 1113, 1355, 1377, 1454, 1477
MboI GATC 9 cut(s) 77, 237, 516, 1069, 1111, 1353, 1375, 1452, 1475
MboII GAAGA 6 cut(s) 20, 1043, 1177, 1207, 1453, 1552
MflI RGATCY 3 cut(s) 1069, 1353, 1375
MhlI GDGCHC 2 cut(s) 559, 1590
MluCI AATT 3 cut(s) 521, 761, 925
MlyI GAGTC 3 cut(s) 132, 384, 1296
MroI TCCGGA 1 cut(s) 629
MroXI GAANNNNTTC 1 cut(s) 1172
MslI CAYNNNNRTG 3 cut(s) 153, 945, 1535
MspA1I CMGCKG 2 cut(s) 404, 1367
MspCI CTTAAG 2 cut(s) 890, 1432
MspI CCGG 6 cut(s) 135, 192, 630, 785, 1554, 1603
MspR9I CCNGG 2 cut(s) 585, 1603
Mva1269I GAATGC 1 cut(s) 1622
MvaI CCWGG 1 cut(s) 585
MvnI CGCG 1 cut(s) 198
MwoI GCNNNNNNNGC 3 cut(s) 722, 956, 1579
NciI CCSGG 1 cut(s) 1603
NcoI CCATGG 2 cut(s) 19, 1340
NdeII GATC 9 cut(s) 77, 237, 516, 1069, 1111, 1353, 1375, 1452, 1475
NlaIII CATG 8 cut(s) 23, 45, 280, 305, 704, 905, 1344, 1684
NlaIV GGNNCC 2 cut(s) 259, 424
NmeAIII GCCGAG 1 cut(s) 33
NmuCI GTSAC 3 cut(s) 137, 587, 1021
NspI RCATGY 1 cut(s) 45
PaeR7I CTCGAG 1 cut(s) 173
PciI ACATGT 1 cut(s) 41
PcsI WCGNNNNNNNCGW 2 cut(s) 12, 1575
PctI GAATGC 1 cut(s) 1622
PdmI GAANNNNTTC 1 cut(s) 1172
PinAI ACCGGT 1 cut(s) 1553
PkrI GCNGC 4 cut(s) 197, 991, 1249, 1519
Ple19I CGATCG 1 cut(s) 80
PleI GAGTC 3 cut(s) 131, 383, 1295
PpsI GAGTC 3 cut(s) 131, 383, 1295
Ppu21I YACGTR 1 cut(s) 437
PscI ACATGT 1 cut(s) 41
PshAI GACNNNNGTC 1 cut(s) 44
Psp124BI GAGCTC 1 cut(s) 1590
Psp1406I AACGTT 1 cut(s) 693
Psp6I CCWGG 1 cut(s) 583
PspGI CCWGG 1 cut(s) 583
PspN4I GGNNCC 2 cut(s) 259, 424
PspPI GGNCC 2 cut(s) 581, 913
PspXI VCTCGAGB 1 cut(s) 173
PstI CTGCAG 2 cut(s) 1111, 1249
PsuI RGATCY 3 cut(s) 1069, 1353, 1375
PvuI CGATCG 1 cut(s) 80
PvuII CAGCTG 1 cut(s) 404
RsaI GTAC 3 cut(s) 340, 400, 603
RsaNI GTAC 3 cut(s) 339, 399, 602
RseI CAYNNNNRTG 3 cut(s) 153, 945, 1535
SacI GAGCTC 1 cut(s) 1590
SatI GCNGC 4 cut(s) 196, 990, 1248, 1518
Sau3AI GATC 9 cut(s) 77, 237, 516, 1069, 1111, 1353, 1375, 1452, 1475
Sau96I GGNCC 2 cut(s) 581, 913
SchI GAGTC 3 cut(s) 132, 384, 1296
ScrFI CCNGG 2 cut(s) 585, 1603
SduI GDGCHC 2 cut(s) 559, 1590
SexAI ACCWGGT 1 cut(s) 583
SfaNI GCATC 4 cut(s) 169, 1009, 1052, 1648
SfcI CTRYAG 2 cut(s) 1107, 1245
Sfr274I CTCGAG 1 cut(s) 173
SinI GGWCC 1 cut(s) 581
SlaI CTCGAG 1 cut(s) 173
SmiMI CAYNNNNRTG 3 cut(s) 153, 945, 1535
SmlI CTYRAG 9 cut(s) 35, 173, 454, 501, 779, 890, 1073, 1432, 1583
SmoI CTYRAG 9 cut(s) 35, 173, 454, 501, 779, 890, 1073, 1432, 1583
Sse9I AATT 3 cut(s) 521, 761, 925
SsiI CCGC 3 cut(s) 57, 196, 1365
SspMI CTAG 3 cut(s) 567, 620, 1598
SstI GAGCTC 1 cut(s) 1590
StyD4I CCNGG 2 cut(s) 583, 1601
StyI CCWWGG 3 cut(s) 19, 916, 1340
TaaI ACNGT 4 cut(s) 118, 398, 1482, 1534
TaiI ACGT 4 cut(s) 298, 439, 463, 696
TaqI TCGA 4 cut(s) 76, 174, 216, 1614
TasI AATT 3 cut(s) 521, 761, 925
TatI WGTACW 1 cut(s) 398
TauI GCSGC 1 cut(s) 198
TscAI CASTG 3 cut(s) 215, 1444, 1485
TseFI GTSAC 3 cut(s) 137, 587, 1021
TseI GCWGC 3 cut(s) 989, 1247, 1517
Tsp45I GTSAC 3 cut(s) 137, 587, 1021
TspGWI ACGGA 1 cut(s) 4
TspRI CASTG 3 cut(s) 215, 1444, 1485
Vha464I CTTAAG 2 cut(s) 890, 1432
VneI GTGCAC 1 cut(s) 555
VpaK11BI GGWCC 1 cut(s) 581
XapI RAATTY 1 cut(s) 761
XceI RCATGY 1 cut(s) 45
XhoI CTCGAG 1 cut(s) 173
XmnI GAANNNNTTC 1 cut(s) 1172
XspI CTAG 3 cut(s) 567, 620, 1598
ZraI GACGTC 1 cut(s) 461
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.