AT3G02910

Gamma-glutamyl cyclotransferase, AIG2-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0021897
Physical Location & Seq
Forward (+)
649814 .. 650921
1108 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G02910.1

Sequence Viewer

Length: 564 bp
ATGGGACACGAAACAATGACGCCGGCAACAACAACGCTCGTGTTCACGTACGGAACTCTAAAGAGAGGATTCTCAAATCATGTCCTGATGCAAGATCTGATCCGATCTGGTGACGCTTCTTTCAAAGGTGTTTACCAAACTCTAGACAAATATCCTCTCGTCTGTGGACCTTACCGAGTCCCTTTCCTCCTCAACAAACCTGGATCGGGCTATCACGTCAACGGCGAGCTTTACGCGGTTTCTCCTCGCGGTCTCTCTCGTCTCGACGAGCTCGAAGGAATCAGTCGCGGTCATTACATCCGGCAACCGATACGTCTCGCGGCGGCGGAGGAAGAAGAAGAAGAAGAAGGAGATCTGGAAACAGAGGCGCCGTCGTCGTGCGTGGTGGAGGCGTATTACGCTCATAAGAGTTATGAGGAAGAGCTGTGGAGGAGGAATAGAGGAAGATCATTCGGCGCGTACACGGAAAACGAAGCGCGTGGATATGTGAAACGCAATGATAGGCCTCAGCATCTTAGCTTCTTGGATCATATCCGTATTTTCGTATCTTCTCCATGTGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0008150 GO:0009628 GO:0050896 GO:0080167
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GGACT

Protein Analysis

187

Amino Acids

21.28

Weight (kDa)

5.83

Isoelectric Point (pI)

59.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GGACT PF06094 14 - 114 5.6e-19 Gamma-glutamyl cyclotransferase, AIG2-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0021897)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G02910
malus_domestica MD07G1310600.v1.1
prunus_persica Prupe.2G328600_v2.0.a1
pyrus_communis pycom07g28280

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 367
AccII CGCG 6 cut(s) 236, 249, 288, 320, 458, 478
AciI CCGC 6 cut(s) 236, 249, 288, 320, 323, 326
AclWI GGATC 3 cut(s) 94, 211, 534
AcyI GRCGYC 2 cut(s) 20, 368
AfaI GTAC 2 cut(s) 50, 461
AfiI CCNNNNNNNGG 1 cut(s) 206
AgsI TTSAA 1 cut(s) 124
AjiI CACGTC 1 cut(s) 217
AjnI CCWGG 1 cut(s) 199
AluBI AGCT 4 cut(s) 229, 271, 424, 519
AluI AGCT 4 cut(s) 229, 271, 424, 519
Alw21I GWGCWC 1 cut(s) 273
Alw26I GTCTC 3 cut(s) 257, 266, 320
AlwI GGATC 3 cut(s) 94, 211, 534
AoxI GGCC 1 cut(s) 503
AspLEI GCGC 3 cut(s) 370, 458, 478
AspS9I GGNCC 1 cut(s) 167
AsuHPI GGTGA 1 cut(s) 122
AvaII GGWCC 1 cut(s) 167
BanI GGYRCC 1 cut(s) 367
BanII GRGCYC 1 cut(s) 273
BauI CACGAG 1 cut(s) 38
Bbv12I GWGCWC 1 cut(s) 273
BbvCI CCTCAGC 1 cut(s) 507
BceAI ACGGC 2 cut(s) 238, 355
BciT130I CCWGG 1 cut(s) 201
BcoDI GTCTC 3 cut(s) 257, 266, 320
BfaI CTAG 1 cut(s) 143
BfoI RGCGCY 1 cut(s) 371
BglII AGATCT 2 cut(s) 94, 352
BisI GCNGC 2 cut(s) 321, 324
BlsI GCNGC 2 cut(s) 322, 325
Bme1390I CCNGG 1 cut(s) 201
Bme18I GGWCC 1 cut(s) 167
BmgBI CACGTC 1 cut(s) 217
BmgT120I GGNCC 1 cut(s) 167
BmiI GGNNCC 1 cut(s) 369
BmrFI CCNGG 1 cut(s) 201
BmsI GCATC 2 cut(s) 78, 520
Bpu10I CCTNAGC 1 cut(s) 507
BsaAI YACGTR 1 cut(s) 48
BsaHI GRCGYC 2 cut(s) 20, 368
BsaI GGTCTC 1 cut(s) 257
Bsc4I CCNNNNNNNGG 1 cut(s) 206
Bse118I RCCGGY 1 cut(s) 22
Bse3DI GCAATG 1 cut(s) 502
BseBI CCWGG 1 cut(s) 201
BseGI GGATG 1 cut(s) 297
BseLI CCNNNNNNNGG 1 cut(s) 206
BseMI GCAATG 1 cut(s) 502
BseMII CTCAG 1 cut(s) 521
BseRI GAGGAG 3 cut(s) 179, 234, 445
Bsh1236I CGCG 6 cut(s) 236, 249, 288, 320, 458, 478
BshFI GGCC 1 cut(s) 505
BshNI GGYRCC 1 cut(s) 367
BsiHKAI GWGCWC 1 cut(s) 273
BsiSI CCGG 2 cut(s) 23, 301
BsiWI CGTACG 1 cut(s) 48
BslFI GGGAC 2 cut(s) 18, 164
BslI CCNNNNNNNGG 1 cut(s) 206
BsmAI GTCTC 3 cut(s) 257, 266, 320
BsmBI CGTCTC 2 cut(s) 266, 320
BsmFI GGGAC 2 cut(s) 18, 164
BsnI GGCC 1 cut(s) 505
Bso31I GGTCTC 1 cut(s) 257
Bsp1286I GDGCHC 1 cut(s) 273
Bsp143I GATC 7 cut(s) 94, 99, 104, 203, 352, 446, 526
BspACI CCGC 6 cut(s) 236, 249, 288, 320, 323, 326
BspANI GGCC 1 cut(s) 505
BspCNI CTCAG 1 cut(s) 520
BspFNI CGCG 6 cut(s) 236, 249, 288, 320, 458, 478
BspLI GGNNCC 1 cut(s) 369
BspPI GGATC 3 cut(s) 94, 211, 534
BspQI GCTCTTC 1 cut(s) 414
BspT107I GGYRCC 1 cut(s) 367
BspTNI GGTCTC 1 cut(s) 257
BsrDI GCAATG 1 cut(s) 502
BsrFI RCCGGY 1 cut(s) 22
BssAI RCCGGY 1 cut(s) 22
BssMI GATC 7 cut(s) 94, 99, 104, 203, 352, 446, 526
BssNI GRCGYC 2 cut(s) 20, 368
BssSI CACGAG 1 cut(s) 38
Bst2BI CACGAG 1 cut(s) 38
Bst2UI CCWGG 1 cut(s) 201
Bst6I CTCTTC 1 cut(s) 414
BstACI GRCGYC 2 cut(s) 20, 368
BstBAI YACGTR 1 cut(s) 48
BstC8I GCNNGC 2 cut(s) 24, 227
BstDEI CTNAG 2 cut(s) 507, 515
BstF5I GGATG 1 cut(s) 297
BstFNI CGCG 6 cut(s) 236, 249, 288, 320, 458, 478
BstH2I RGCGCY 1 cut(s) 371
BstHHI GCGC 3 cut(s) 370, 458, 478
BstKTI GATC 7 cut(s) 97, 102, 107, 206, 355, 449, 529
BstMAI GTCTC 3 cut(s) 257, 266, 320
BstMBI GATC 7 cut(s) 94, 99, 104, 203, 352, 446, 526
BstMWI GCNNNNNNNGC 1 cut(s) 398
BstNI CCWGG 1 cut(s) 201
BstSCI CCNGG 1 cut(s) 199
BstUI CGCG 6 cut(s) 236, 249, 288, 320, 458, 478
BstX2I RGATCY 2 cut(s) 94, 352
BstYI RGATCY 2 cut(s) 94, 352
BsuRI GGCC 1 cut(s) 505
BtrI CACGTC 1 cut(s) 217
BtsCI GGATG 1 cut(s) 297
Cac8I GCNNGC 2 cut(s) 24, 227
CfoI GCGC 3 cut(s) 370, 458, 478
Cfr10I RCCGGY 1 cut(s) 22
Cfr13I GGNCC 1 cut(s) 167
CseI GACGC 2 cut(s) 28, 122
Csp6I GTAC 2 cut(s) 49, 460
CviAII CATG 2 cut(s) 80, 555
CviJI RGCY 6 cut(s) 210, 229, 271, 424, 505, 519
CviKI_1 RGCY 6 cut(s) 210, 229, 271, 424, 505, 519
CviQI GTAC 2 cut(s) 49, 460
DdeI CTNAG 2 cut(s) 507, 515
DinI GGCGCC 1 cut(s) 369
DpnI GATC 7 cut(s) 96, 101, 106, 205, 354, 448, 528
DpnII GATC 7 cut(s) 94, 99, 104, 203, 352, 446, 526
Eam1104I CTCTTC 1 cut(s) 414
EarI CTCTTC 1 cut(s) 414
EciI GGCGGA 1 cut(s) 341
Ecl136II GAGCTC 1 cut(s) 271
Eco147I AGGCCT 1 cut(s) 505
Eco24I GRGCYC 1 cut(s) 273
Eco31I GGTCTC 1 cut(s) 257
Eco47I GGWCC 1 cut(s) 167
Eco53kI GAGCTC 1 cut(s) 271
EcoICRI GAGCTC 1 cut(s) 271
EcoRII CCWGG 1 cut(s) 199
EcoT38I GRGCYC 1 cut(s) 273
EgeI GGCGCC 1 cut(s) 369
EheI GGCGCC 1 cut(s) 369
Esp3I CGTCTC 2 cut(s) 266, 320
FaeI CATG 2 cut(s) 83, 558
FaiI YATR 6 cut(s) 81, 405, 414, 486, 531, 556
FaqI GGGAC 2 cut(s) 18, 164
FatI CATG 2 cut(s) 79, 554
Fnu4HI GCNGC 2 cut(s) 321, 324
FokI GGATG 1 cut(s) 284
FriOI GRGCYC 1 cut(s) 273
Fsp4HI GCNGC 2 cut(s) 321, 324
FspBI CTAG 1 cut(s) 143
GlaI GCGC 3 cut(s) 369, 457, 477
GluI GCNGC 2 cut(s) 321, 324
HaeII RGCGCY 1 cut(s) 371
HaeIII GGCC 1 cut(s) 505
HapII CCGG 2 cut(s) 23, 301
HgaI GACGC 2 cut(s) 28, 122
HhaI GCGC 3 cut(s) 370, 458, 478
Hin1I GRCGYC 2 cut(s) 20, 368
Hin1II CATG 2 cut(s) 83, 558
Hin6I GCGC 3 cut(s) 368, 456, 476
HinP1I GCGC 3 cut(s) 368, 456, 476
HincII GTYRAC 1 cut(s) 220
HindII GTYRAC 1 cut(s) 220
HinfI GANTC 3 cut(s) 69, 177, 279
HpaII CCGG 2 cut(s) 23, 301
HphI GGTGA 1 cut(s) 122
Hpy166II GTNNAC 5 cut(s) 45, 133, 167, 220, 462
Hpy188I TCNGA 2 cut(s) 99, 104
Hpy188III TCNNGA 4 cut(s) 85, 143, 263, 356
Hpy8I GTNNAC 5 cut(s) 45, 133, 167, 220, 462
Hpy99I CGWCG 3 cut(s) 269, 376, 379
HpyAV CCTTC 2 cut(s) 269, 341
HpyCH4IV ACGT 3 cut(s) 47, 216, 313
HpyCH4V TGCA 1 cut(s) 91
HpyF10VI GCNNNNNNNGC 1 cut(s) 398
HpyF3I CTNAG 2 cut(s) 507, 515
HpySE526I ACGT 3 cut(s) 47, 216, 313
Hsp92I GRCGYC 2 cut(s) 20, 368
Hsp92II CATG 2 cut(s) 83, 558
HspAI GCGC 3 cut(s) 368, 456, 476
KasI GGCGCC 1 cut(s) 367
KroI GCCGGC 1 cut(s) 22
KroNI GCCGGC 1 cut(s) 24
Kzo9I GATC 7 cut(s) 94, 99, 104, 203, 352, 446, 526
LguI GCTCTTC 1 cut(s) 414
LpnPI CCDG 7 cut(s) 36, 93, 98, 186, 213, 314, 341
LweI GCATC 2 cut(s) 78, 520
MaeI CTAG 1 cut(s) 143
MaeII ACGT 3 cut(s) 47, 216, 313
MaeIII GTNAC 1 cut(s) 110
MalI GATC 7 cut(s) 96, 101, 106, 205, 354, 448, 528
MboI GATC 7 cut(s) 94, 99, 104, 203, 352, 446, 526
MboII GAAGA 8 cut(s) 344, 347, 350, 353, 356, 431, 456, 540
MflI RGATCY 2 cut(s) 94, 352
MhlI GDGCHC 1 cut(s) 273
Mly113I GGCGCC 1 cut(s) 368
MlyI GAGTC 1 cut(s) 186
MroNI GCCGGC 1 cut(s) 22
MspI CCGG 2 cut(s) 23, 301
MspR9I CCNGG 1 cut(s) 201
MvaI CCWGG 1 cut(s) 201
MvnI CGCG 6 cut(s) 236, 249, 288, 320, 458, 478
MwoI GCNNNNNNNGC 1 cut(s) 398
NaeI GCCGGC 1 cut(s) 24
NarI GGCGCC 1 cut(s) 368
NdeII GATC 7 cut(s) 94, 99, 104, 203, 352, 446, 526
NgoMIV GCCGGC 1 cut(s) 22
NlaIII CATG 2 cut(s) 83, 558
NlaIV GGNNCC 1 cut(s) 369
NmuCI GTSAC 1 cut(s) 110
PceI AGGCCT 1 cut(s) 505
PciSI GCTCTTC 1 cut(s) 414
PcsI WCGNNNNNNNCGW 2 cut(s) 222, 270
PdiI GCCGGC 1 cut(s) 24
PfeI GAWTC 2 cut(s) 69, 279
Pfl23II CGTACG 1 cut(s) 48
PkrI GCNGC 2 cut(s) 322, 325
PleI GAGTC 1 cut(s) 185
PluTI GGCGCC 1 cut(s) 371
PpsI GAGTC 1 cut(s) 185
Ppu21I YACGTR 1 cut(s) 48
Psp124BI GAGCTC 1 cut(s) 273
Psp6I CCWGG 1 cut(s) 199
PspGI CCWGG 1 cut(s) 199
PspLI CGTACG 1 cut(s) 48
PspN4I GGNNCC 1 cut(s) 369
PspPI GGNCC 1 cut(s) 167
PsuI RGATCY 2 cut(s) 94, 352
RsaI GTAC 2 cut(s) 50, 461
RsaNI GTAC 2 cut(s) 49, 460
SacI GAGCTC 1 cut(s) 273
SapI GCTCTTC 1 cut(s) 414
SatI GCNGC 2 cut(s) 321, 324
Sau3AI GATC 7 cut(s) 94, 99, 104, 203, 352, 446, 526
Sau96I GGNCC 1 cut(s) 167
SchI GAGTC 1 cut(s) 186
ScrFI CCNGG 1 cut(s) 201
SduI GDGCHC 1 cut(s) 273
SfaNI GCATC 2 cut(s) 78, 520
SfoI GGCGCC 1 cut(s) 369
SinI GGWCC 1 cut(s) 167
SseBI AGGCCT 1 cut(s) 505
SsiI CCGC 6 cut(s) 236, 249, 288, 320, 323, 326
SspDI GGCGCC 1 cut(s) 367
SspMI CTAG 1 cut(s) 143
SstI GAGCTC 1 cut(s) 273
StuI AGGCCT 1 cut(s) 505
StyD4I CCNGG 1 cut(s) 199
TaiI ACGT 3 cut(s) 50, 219, 316
TaqI TCGA 2 cut(s) 264, 273
TauI GCSGC 2 cut(s) 323, 326
TfiI GAWTC 2 cut(s) 69, 279
TseFI GTSAC 1 cut(s) 110
Tsp45I GTSAC 1 cut(s) 110
TspGWI ACGGA 3 cut(s) 66, 479, 524
VpaK11BI GGWCC 1 cut(s) 167
XbaI TCTAGA 1 cut(s) 142
XspI CTAG 1 cut(s) 143
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.