AT3G14362

DVL family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0017487
Physical Location & Seq
Reverse (-)
4793678 .. 4794417
740 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G14362.1

Sequence Viewer

Length: 147 bp
ATGGCAGGATTAAAGAGAAAGTTCAACAAAGGACACGCTTTTACAAGCAAATGTGTTTCCTTGGTGAAGGAACAACGAGCTCGTCTCTACATTCTCCGCCGTTGTGCCACCATGCTTTGCTGCTGGTACATCCATGGCGATGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DVL

Protein Analysis

48

Amino Acids

5.63

Weight (kDa)

9.76

Isoelectric Point (pI)

47.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DVL PF08137 23 - 41 9.7e-10 DVL family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017487)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G17235 AT1G53708 AT3G14362
malus_domestica MD09G1171200.v1.1
prunus_persica Prupe.3G029700_v2.0.a1
rosa_chinensis RchiOBHm_Chr2g0148241
rosa_rugosa Rorug02G0405000
rosa_samantha Rh2AG463500 Rh2BG476600 Rh2CG450300 Rh2DG485300
rosa_wichuraiana Rw2G037780

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 97
AfaI GTAC 1 cut(s) 128
AgsI TTSAA 1 cut(s) 25
AluBI AGCT 1 cut(s) 80
AluI AGCT 1 cut(s) 80
Alw21I GWGCWC 1 cut(s) 82
Alw26I GTCTC 1 cut(s) 89
ApeKI GCWGC 1 cut(s) 120
AsuHPI GGTGA 1 cut(s) 76
BanII GRGCYC 1 cut(s) 82
Bbv12I GWGCWC 1 cut(s) 82
BbvI GCAGC 1 cut(s) 107
BceAI ACGGC 1 cut(s) 84
BcoDI GTCTC 1 cut(s) 89
BisI GCNGC 1 cut(s) 121
BlsI GCNGC 1 cut(s) 122
BplI GAGNNNNNCTC 2 cut(s) 69, 101
BsaJI CCNNGG 2 cut(s) 60, 133
BseDI CCNNGG 2 cut(s) 60, 133
BseGI GGATG 1 cut(s) 129
BseXI GCAGC 1 cut(s) 107
BsiHKAI GWGCWC 1 cut(s) 82
BsmAI GTCTC 1 cut(s) 89
BsmBI CGTCTC 1 cut(s) 89
Bsp1286I GDGCHC 1 cut(s) 82
Bsp19I CCATGG 1 cut(s) 133
BspACI CCGC 1 cut(s) 97
BssECI CCNNGG 2 cut(s) 60, 133
BssT1I CCWWGG 2 cut(s) 60, 133
BstDSI CCRYGG 1 cut(s) 133
BstF5I GGATG 1 cut(s) 129
BstMAI GTCTC 1 cut(s) 89
BstV1I GCAGC 1 cut(s) 107
BtgI CCRYGG 1 cut(s) 133
BtsCI GGATG 1 cut(s) 129
Csp6I GTAC 1 cut(s) 127
CviAII CATG 2 cut(s) 112, 134
CviJI RGCY 1 cut(s) 80
CviKI_1 RGCY 1 cut(s) 80
CviQI GTAC 1 cut(s) 127
EciI GGCGGA 1 cut(s) 86
Ecl136II GAGCTC 1 cut(s) 80
Eco130I CCWWGG 2 cut(s) 60, 133
Eco24I GRGCYC 1 cut(s) 82
Eco53kI GAGCTC 1 cut(s) 80
EcoICRI GAGCTC 1 cut(s) 80
EcoT14I CCWWGG 2 cut(s) 60, 133
EcoT38I GRGCYC 1 cut(s) 82
ErhI CCWWGG 2 cut(s) 60, 133
Esp3I CGTCTC 1 cut(s) 89
FaeI CATG 2 cut(s) 115, 137
FaiI YATR 2 cut(s) 113, 135
FatI CATG 2 cut(s) 111, 133
Fnu4HI GCNGC 1 cut(s) 121
FokI GGATG 1 cut(s) 116
FriOI GRGCYC 1 cut(s) 82
Fsp4HI GCNGC 1 cut(s) 121
GluI GCNGC 1 cut(s) 121
Hin1II CATG 2 cut(s) 115, 137
HphI GGTGA 1 cut(s) 76
HpyAV CCTTC 1 cut(s) 61
Hsp92II CATG 2 cut(s) 115, 137
LpnPI CCDG 1 cut(s) 109
Lsp1109I GCAGC 1 cut(s) 107
MhlI GDGCHC 1 cut(s) 82
MseI TTAA 1 cut(s) 11
MslI CAYNNNNRTG 1 cut(s) 138
NcoI CCATGG 1 cut(s) 133
NlaIII CATG 2 cut(s) 115, 137
PkrI GCNGC 1 cut(s) 122
Psp124BI GAGCTC 1 cut(s) 82
RsaI GTAC 1 cut(s) 128
RsaNI GTAC 1 cut(s) 127
RseI CAYNNNNRTG 1 cut(s) 138
SacI GAGCTC 1 cut(s) 82
SaqAI TTAA 1 cut(s) 11
SatI GCNGC 1 cut(s) 121
SduI GDGCHC 1 cut(s) 82
SetI ASST 1 cut(s) 82
SgeI CNNG 8 cut(s) 18, 47, 57, 73, 89, 93, 124, 136
SmiMI CAYNNNNRTG 1 cut(s) 138
SsiI CCGC 1 cut(s) 97
SstI GAGCTC 1 cut(s) 82
StyI CCWWGG 2 cut(s) 60, 133
Tru1I TTAA 1 cut(s) 11
Tru9I TTAA 1 cut(s) 11
TseI GCWGC 1 cut(s) 120
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.