AT3G18040

mitogen-activated protein kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Forward (+)
6174239 .. 6178534
4296 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G18040.3

Sequence Viewer

Length: 1533 bp
ATGGATCCTCATAAAAAGGTTGCACTGGAGACTGAGTTCTTTACAGAATACGGTGAAGCTAGCCGATACCAAATCCAAGAAGTTATAGGGAAAGGAAGTTACGGTGTTGTGGCATCTGCAATCGACACACATTCAGGCGAAAAGGTTGCCATTAAGAAAATCAATGATGTGTTTGAGCACGTCTCTGATGCAACGCGGATTCTAAGAGAGATCAAGCTTCTCAGGTTGCTCCGCCATCCTGATATAGTGGAGATAAAGCATGTAATGCTTCCTCCTTCACGCCGTGAGTTCAGAGACATTTATGTTGTTTTCGAGTTGATGGAATCAGATCTTCACCAAGTTATCAAGGCGAACGATGATCTTACACCTGAGCACTACCAGTTTTTCCTCTACCAGCTTCTTCGTGGTCTGAAGTTCATACACACAGCTAATGTGTTTCATCGTGATTTGAAGCCTAAAAATATTCTAGCCAACTCTGATTGCAAGTTGAAGATTTGCGACTTTGGGCTTGCTCGAGTGTCCTTTAATGATGCACCTTCGGCTATATTCTGGACTGACTATGTTGCTACAAGATGGTACCGTGCGCCAGAACTTTGTGGCTCTTTCTTCTCCAAATATACTCCTGCCATTGATATATGGAGCATAGGATGCATATTTGCAGAAATGCTCACTGGGAAGCCATTGTTTCCTGGGAAGAATGTGGTGCACCAATTGGATATTATGACTGATTTGCTTGGTACTCCTCCTCCCGAAGCTATTGCAAGGATTCGTAATGAAAAGGCGAGGAGATATCTCGGCAATATGAGGAGAAAACCGCCAGTTCCATTCACTCACAAATTTCCTCATGTAGACCCATTGGCCCTTCGCTTACTGCACCGTCTTCTTGCATTTGATCCCAAAGACCGTCCCTCAGCTGAAGAGGCACTGGCAGATCCTTACTTCTATGGTCTGGCAAACGTTGATCGGGAACCATCTACTCAACCGATTCCGAAACTCGAGTTTGAGTTTGAAAGAAGGAAGATAACAAAAGAAGATGTGAGAGAATTGATCTACAGAGAGATATTAGAGTATCATCCTCAGATGCTGCAAGAATATCTTCGAGGTGGAGAACAGACTAGCTTCATGTACCCAAGTGGTGTTGATCGCTTTAAGAGACAATTTGCTCATCTTGAGGAAAATTACGGTAAGGGTGAGAAAGGCTCACCTCTTCAACGCCAACACGCTTCCTTGCCTAGAGAGCGAGTCCCTGCTCCTAAGAAAGAGAATGGATCACATAATCACGATATCGAGAACAGATCCATAGCGTCTTTAGTCACGACCCTCGAAAGCCCTCCAACGTCACAACACGAGGGGTCAGACTACAGGAATGGGACGAGCCAGACGGGTTACAGCGCTCGCAGCTTGCTGAAAAGTGCCAGCATCAGTGCATCTAAATGCATTGGCATGAAACCAAGAAACAAGTCCGAGTACGGGGAATCAAACAATGATACGGTTGATGCTCTGTCTCAAAAGGTCGCGGCTCTCCACACTTGA

Protein Analysis

510

Amino Acids

58.39

Weight (kDa)

8.54

Isoelectric Point (pI)

37.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 132 - 423 2.1e-65 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 133 - 343 4e-31 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 576
AccB1I GGYRCC 1 cut(s) 576
AccI GTMKAC 1 cut(s) 849
AccII CGCG 2 cut(s) 196, 1517
AciI CCGC 4 cut(s) 196, 232, 815, 1517
AclI AACGTT 1 cut(s) 957
AclWI GGATC 5 cut(s) 12, 887, 926, 1276, 1290
AcsI RAATTY 1 cut(s) 836
AcuI CTGAAG 2 cut(s) 431, 936
AdeI CACNNNGTG 1 cut(s) 284
AfaI GTAC 4 cut(s) 578, 739, 1127, 1469
AfeI AGCGCT 1 cut(s) 1393
AfiI CCNNNNNNNGG 1 cut(s) 1470
AgsI TTSAA 4 cut(s) 451, 490, 1010, 1211
AjiI CACGTC 1 cut(s) 181
AjnI CCWGG 1 cut(s) 688
AloI GAACNNNNNNTCC 2 cut(s) 20, 52
AluBI AGCT 8 cut(s) 59, 217, 397, 428, 755, 914, 1119, 1401
AluI AGCT 8 cut(s) 59, 217, 397, 428, 755, 914, 1119, 1401
Alw21I GWGCWC 3 cut(s) 180, 375, 708
Alw26I GTCTC 5 cut(s) 23, 187, 288, 1147, 1509
Alw44I GTGCAC 1 cut(s) 704
AlwI GGATC 5 cut(s) 12, 887, 926, 1276, 1290
AlwNI CAGNNNCTG 1 cut(s) 1084
Ama87I CYCGRG 2 cut(s) 513, 995
Aor51HI AGCGCT 1 cut(s) 1393
AoxI GGCC 1 cut(s) 858
ApaLI GTGCAC 1 cut(s) 704
ApeKI GCWGC 2 cut(s) 1084, 1398
ApoI RAATTY 1 cut(s) 836
Asp700I GAANNNNTTC 1 cut(s) 1095
Asp718I GGTACC 1 cut(s) 576
AspLEI GCGC 2 cut(s) 586, 1394
AspS9I GGNCC 1 cut(s) 859
AsuHPI GGTGA 4 cut(s) 65, 326, 1194, 1202
AsuNHI GCTAGC 1 cut(s) 59
AvaI CYCGRG 2 cut(s) 513, 995
BaeGI GKGCMC 1 cut(s) 708
BamHI GGATCC 1 cut(s) 4
BanI GGYRCC 1 cut(s) 576
BauI CACGAG 1 cut(s) 1346
BbsI GAAGAC 1 cut(s) 872
Bbv12I GWGCWC 3 cut(s) 180, 375, 708
BbvCI CCTCAGC 1 cut(s) 910
BbvI GCAGC 2 cut(s) 1071, 1410
BccI CCATC 4 cut(s) 243, 313, 567, 979
BceAI ACGGC 1 cut(s) 267
BcgI CGANNNNNNTGC 4 cut(s) 128, 162, 740, 774
BciT130I CCWGG 1 cut(s) 690
BcoDI GTCTC 5 cut(s) 23, 187, 288, 1147, 1509
BfaI CTAG 4 cut(s) 60, 467, 1116, 1233
BfmI CTRYAG 2 cut(s) 1051, 1360
BfoI RGCGCY 1 cut(s) 1395
BglII AGATCT 1 cut(s) 328
BisI GCNGC 3 cut(s) 1085, 1399, 1518
BlsI GCNGC 3 cut(s) 1086, 1400, 1519
Bme1390I CCNGG 1 cut(s) 690
BmeT110I CYCGRG 2 cut(s) 513, 995
BmgBI CACGTC 1 cut(s) 181
BmgT120I GGNCC 1 cut(s) 859
BmiI GGNNCC 3 cut(s) 6, 578, 969
BmrFI CCNGG 1 cut(s) 690
BmrI ACTGGG 1 cut(s) 681
BmsI GCATC 8 cut(s) 122, 178, 520, 638, 1071, 1428, 1436, 1486
BmtI GCTAGC 1 cut(s) 63
BmuI ACTGGG 1 cut(s) 681
BpiI GAAGAC 1 cut(s) 872
BplI GAGNNNNNCTC 4 cut(s) 167, 199, 1184, 1216
BpmI CTGGAG 1 cut(s) 47
Bpu10I CCTNAGC 2 cut(s) 369, 910
BpuEI CTTGAG 1 cut(s) 1190
BsaJI CCNNGG 1 cut(s) 689
BsaXI ACNNNNNCTCC 4 cut(s) 20, 50, 730, 760
Bsc4I CCNNNNNNNGG 1 cut(s) 1470
Bse1I ACTGG 5 cut(s) 30, 379, 676, 818, 930
BseBI CCWGG 1 cut(s) 690
BseDI CCNNGG 1 cut(s) 689
BseGI GGATG 3 cut(s) 235, 653, 1072
BseLI CCNNNNNNNGG 1 cut(s) 1470
BseMII CTCAG 5 cut(s) 24, 235, 360, 924, 1091
BseNI ACTGG 5 cut(s) 30, 379, 676, 818, 930
BseRI GAGGAG 4 cut(s) 732, 735, 799, 820
BseSI GKGCMC 1 cut(s) 708
BseXI GCAGC 2 cut(s) 1071, 1410
BsgI GTGCAG 1 cut(s) 857
Bsh1236I CGCG 2 cut(s) 196, 1517
BshFI GGCC 1 cut(s) 860
BshNI GGYRCC 1 cut(s) 576
BsiHKAI GWGCWC 3 cut(s) 180, 375, 708
BsiHKCI CYCGRG 2 cut(s) 513, 995
BslFI GGGAC 3 cut(s) 891, 1229, 1384
BslI CCNNNNNNNGG 1 cut(s) 1470
BsmAI GTCTC 5 cut(s) 23, 187, 288, 1147, 1509
BsmBI CGTCTC 1 cut(s) 187
BsmFI GGGAC 3 cut(s) 891, 1229, 1384
BsnI GGCC 1 cut(s) 860
BsoBI CYCGRG 2 cut(s) 513, 995
Bsp1286I GDGCHC 3 cut(s) 180, 375, 708
BspACI CCGC 4 cut(s) 196, 232, 815, 1517
BspANI GGCC 1 cut(s) 860
BspCNI CTCAG 5 cut(s) 25, 234, 361, 923, 1090
BspFNI CGCG 2 cut(s) 196, 1517
BspLI GGNNCC 3 cut(s) 6, 578, 969
BspOI GCTAGC 1 cut(s) 63
BspPI GGATC 5 cut(s) 12, 887, 926, 1276, 1290
BspT107I GGYRCC 1 cut(s) 576
BsrI ACTGG 5 cut(s) 30, 379, 676, 818, 930
BssECI CCNNGG 1 cut(s) 689
BssSI CACGAG 1 cut(s) 1346
Bst2BI CACGAG 1 cut(s) 1346
Bst2UI CCWGG 1 cut(s) 690
Bst4CI ACNGT 7 cut(s) 53, 104, 581, 878, 905, 1184, 1492
Bst6I CTCTTC 2 cut(s) 912, 1212
BstAPI GCANNNNNTGC 2 cut(s) 265, 648
BstC8I GCNNGC 5 cut(s) 61, 510, 1396, 1403, 1417
BstDEI CTNAG 7 cut(s) 33, 203, 221, 369, 910, 1077, 1254
BstF5I GGATG 3 cut(s) 235, 653, 1072
BstFNI CGCG 2 cut(s) 196, 1517
BstH2I RGCGCY 1 cut(s) 1395
BstHHI GCGC 2 cut(s) 586, 1394
BstMAI GTCTC 5 cut(s) 23, 187, 288, 1147, 1509
BstMWI GCNNNNNNNGC 6 cut(s) 265, 539, 648, 920, 1237, 1398
BstNI CCWGG 1 cut(s) 690
BstNSI RCATGY 1 cut(s) 263
BstSCI CCNGG 1 cut(s) 688
BstSFI CTRYAG 2 cut(s) 1051, 1360
BstSLI GKGCMC 1 cut(s) 708
BstUI CGCG 2 cut(s) 196, 1517
BstV1I GCAGC 2 cut(s) 1071, 1410
BstV2I GAAGAC 1 cut(s) 872
BstX2I RGATCY 4 cut(s) 4, 328, 931, 1295
BstYI RGATCY 4 cut(s) 4, 328, 931, 1295
BsuRI GGCC 1 cut(s) 860
BtrI CACGTC 1 cut(s) 181
BtsCI GGATG 3 cut(s) 235, 653, 1072
BtsIMutI CAGTG 4 cut(s) 23, 669, 923, 1429
Cac8I GCNNGC 5 cut(s) 61, 510, 1396, 1403, 1417
CaiI CAGNNNCTG 1 cut(s) 1084
CfoI GCGC 2 cut(s) 586, 1394
Cfr13I GGNCC 1 cut(s) 859
CseI GACGC 1 cut(s) 1293
Csp6I GTAC 4 cut(s) 577, 738, 1126, 1468
CviAII CATG 4 cut(s) 260, 845, 1123, 1444
CviQI GTAC 4 cut(s) 577, 738, 1126, 1468
DdeI CTNAG 7 cut(s) 33, 203, 221, 369, 910, 1077, 1254
DraIII CACNNNGTG 1 cut(s) 284
Eam1104I CTCTTC 2 cut(s) 912, 1212
EarI CTCTTC 2 cut(s) 912, 1212
EciI GGCGGA 1 cut(s) 221
Eco32I GATATC 2 cut(s) 791, 1285
Eco47III AGCGCT 1 cut(s) 1393
Eco57I CTGAAG 2 cut(s) 431, 936
Eco88I CYCGRG 2 cut(s) 513, 995
EcoRII CCWGG 1 cut(s) 688
EcoRV GATATC 2 cut(s) 791, 1285
EcoT22I ATGCAT 2 cut(s) 653, 1439
Esp3I CGTCTC 1 cut(s) 187
FaeI CATG 4 cut(s) 263, 848, 1126, 1447
FalI AAGNNNNNCTT 2 cut(s) 1080, 1112
FaqI GGGAC 3 cut(s) 891, 1229, 1384
FatI CATG 4 cut(s) 259, 844, 1122, 1443
FblI GTMKAC 1 cut(s) 849
Fnu4HI GCNGC 3 cut(s) 1085, 1399, 1518
FokI GGATG 3 cut(s) 222, 660, 1059
Fsp4HI GCNGC 3 cut(s) 1085, 1399, 1518
FspBI CTAG 4 cut(s) 60, 467, 1116, 1233
GlaI GCGC 2 cut(s) 585, 1393
GluI GCNGC 3 cut(s) 1085, 1399, 1518
GsuI CTGGAG 1 cut(s) 47
HaeII RGCGCY 1 cut(s) 1395
HaeIII GGCC 1 cut(s) 860
HgaI GACGC 1 cut(s) 1293
HhaI GCGC 2 cut(s) 586, 1394
Hin1II CATG 4 cut(s) 263, 848, 1126, 1447
Hin6I GCGC 2 cut(s) 584, 1392
HinP1I GCGC 2 cut(s) 584, 1392
HindIII AAGCTT 1 cut(s) 215
HinfI GANTC 6 cut(s) 199, 323, 766, 985, 1242, 1475
HphI GGTGA 4 cut(s) 65, 326, 1194, 1202
Hpy166II GTNNAC 2 cut(s) 706, 850
Hpy188I TCNGA 9 cut(s) 187, 293, 328, 411, 478, 990, 1080, 1357, 1465
Hpy188III TCNNGA 9 cut(s) 239, 443, 550, 749, 965, 1169, 1280, 1288, 1315
Hpy8I GTNNAC 2 cut(s) 706, 850
HpyAV CCTTC 4 cut(s) 285, 546, 872, 1008
HpyCH4III ACNGT 7 cut(s) 53, 104, 581, 878, 905, 1184, 1492
HpyCH4IV ACGT 3 cut(s) 180, 957, 1337
HpyF10VI GCNNNNNNNGC 6 cut(s) 265, 539, 648, 920, 1237, 1398
HpyF3I CTNAG 7 cut(s) 33, 203, 221, 369, 910, 1077, 1254
HpySE526I ACGT 3 cut(s) 180, 957, 1337
Hsp92II CATG 4 cut(s) 263, 848, 1126, 1447
HspAI GCGC 2 cut(s) 584, 1392
KpnI GGTACC 1 cut(s) 580
LmnI GCTCC 3 cut(s) 234, 639, 1255
Lsp1109I GCAGC 2 cut(s) 1071, 1410
LweI GCATC 8 cut(s) 122, 178, 520, 638, 1071, 1428, 1436, 1486
MaeI CTAG 4 cut(s) 60, 467, 1116, 1233
MaeII ACGT 3 cut(s) 180, 957, 1337
MaeIII GTNAC 4 cut(s) 98, 1312, 1338, 1385
MfeI CAATTG 1 cut(s) 710
MflI RGATCY 4 cut(s) 4, 328, 931, 1295
MhlI GDGCHC 3 cut(s) 180, 375, 708
MluCI AATT 5 cut(s) 710, 836, 1043, 1157, 1177
MlyI GAGTC 1 cut(s) 1251
MmeI TCCRAC 1 cut(s) 1358
Mph1103I ATGCAT 2 cut(s) 653, 1439
MroXI GAANNNNTTC 1 cut(s) 1095
MseI TTAA 3 cut(s) 153, 525, 1149
MslI CAYNNNNRTG 2 cut(s) 1432, 1442
MspA1I CMGCKG 1 cut(s) 914
MspR9I CCNGG 1 cut(s) 690
MunI CAATTG 1 cut(s) 710
MvaI CCWGG 1 cut(s) 690
MvnI CGCG 2 cut(s) 196, 1517
MwoI GCNNNNNNNGC 6 cut(s) 265, 539, 648, 920, 1237, 1398
NheI GCTAGC 1 cut(s) 59
NlaIII CATG 4 cut(s) 263, 848, 1126, 1447
NlaIV GGNNCC 3 cut(s) 6, 578, 969
NmeAIII GCCGAG 1 cut(s) 774
NmuCI GTSAC 2 cut(s) 1312, 1338
NsiI ATGCAT 2 cut(s) 653, 1439
NspI RCATGY 1 cut(s) 263
PaeR7I CTCGAG 2 cut(s) 513, 995
PdmI GAANNNNTTC 1 cut(s) 1095
PfeI GAWTC 5 cut(s) 199, 323, 766, 985, 1475
PkrI GCNGC 3 cut(s) 1086, 1400, 1519
PleI GAGTC 1 cut(s) 1250
PpsI GAGTC 1 cut(s) 1250
Psp1406I AACGTT 1 cut(s) 957
Psp6I CCWGG 1 cut(s) 688
PspGI CCWGG 1 cut(s) 688
PspN4I GGNNCC 3 cut(s) 6, 578, 969
PspPI GGNCC 1 cut(s) 859
PspXI VCTCGAGB 2 cut(s) 513, 995
PstNI CAGNNNCTG 1 cut(s) 1084
PsuI RGATCY 4 cut(s) 4, 328, 931, 1295
PvuII CAGCTG 1 cut(s) 914
RsaI GTAC 4 cut(s) 578, 739, 1127, 1469
RsaNI GTAC 4 cut(s) 577, 738, 1126, 1468
RseI CAYNNNNRTG 2 cut(s) 1432, 1442
SaqAI TTAA 3 cut(s) 153, 525, 1149
SatI GCNGC 3 cut(s) 1085, 1399, 1518
Sau96I GGNCC 1 cut(s) 859
SchI GAGTC 1 cut(s) 1251
ScrFI CCNGG 1 cut(s) 690
SduI GDGCHC 3 cut(s) 180, 375, 708
SfaNI GCATC 8 cut(s) 122, 178, 520, 638, 1071, 1428, 1436, 1486
SfcI CTRYAG 2 cut(s) 1051, 1360
Sfr274I CTCGAG 2 cut(s) 513, 995
SlaI CTCGAG 2 cut(s) 513, 995
SmiMI CAYNNNNRTG 2 cut(s) 1432, 1442
SmlI CTYRAG 3 cut(s) 513, 995, 1169
SmoI CTYRAG 3 cut(s) 513, 995, 1169
Sse9I AATT 5 cut(s) 710, 836, 1043, 1157, 1177
SsiI CCGC 4 cut(s) 196, 232, 815, 1517
SspI AATATT 1 cut(s) 463
SspMI CTAG 4 cut(s) 60, 467, 1116, 1233
StyD4I CCNGG 1 cut(s) 688
TaaI ACNGT 7 cut(s) 53, 104, 581, 878, 905, 1184, 1492
TaiI ACGT 3 cut(s) 183, 960, 1340
TaqI TCGA 7 cut(s) 123, 312, 514, 996, 1099, 1287, 1323
TasI AATT 5 cut(s) 710, 836, 1043, 1157, 1177
TauI GCSGC 1 cut(s) 1520
TfiI GAWTC 5 cut(s) 199, 323, 766, 985, 1475
Tru1I TTAA 3 cut(s) 153, 525, 1149
Tru9I TTAA 3 cut(s) 153, 525, 1149
TscAI CASTG 4 cut(s) 30, 676, 930, 1429
TseFI GTSAC 2 cut(s) 1312, 1338
TseI GCWGC 2 cut(s) 1084, 1398
Tsp45I GTSAC 2 cut(s) 1312, 1338
TspDTI ATGAA 5 cut(s) 406, 428, 789, 1111, 1460
TspRI CASTG 4 cut(s) 30, 676, 930, 1429
VneI GTGCAC 1 cut(s) 704
XapI RAATTY 1 cut(s) 836
XceI RCATGY 1 cut(s) 263
XcmI CCANNNNNNNNNTGG 1 cut(s) 401
XhoI CTCGAG 2 cut(s) 513, 995
XmiI GTMKAC 1 cut(s) 849
XmnI GAANNNNTTC 1 cut(s) 1095
XspI CTAG 4 cut(s) 60, 467, 1116, 1233
Zsp2I ATGCAT 2 cut(s) 653, 1439
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.