Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0006999

Physical Location & Seq

Genomic Coordinates Reverse (-)

66394104 .. 66404538

Gene Structure 10435 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00274750.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2775 bp

ATGGGAACAGTTTTGGACTCCCATTTCTTGGCTCTCACTGCCATTGTCACTGTGGCATATCAGTCGTTGTTCTTCGTAATCACTGCGCTTCTCAAGTTCGATAAAGTCACTGACTTTGCCGGAAGTACCAATTTTGTTATACTTGCAATACTCACTCTGGTTGTCAAGGGCTCATGGCATTTCAGACAGTTCTATTCGTTTTTCATCTCAGATAGTGTTGAGTTTGCTTGTGGTAATATGGGGTCTTCGTCTGGGACTGTTTCTCCTGATGAGAATTTTGCAATGGGGGAGGATCGACGTTTTGATGAAATGCGAGCTAATCTTGGAAAACTGGCAGTATTCTGGATATTTCAGGCTGTCTGGGTATGGACTGTGAGTTTACCTGTAACAGTGGTTAATTCAAGCAACAAAACACCATCTCTTCAAGCTGCGGACTTTATTGGATGGATTATGTGGTCTATTGGTTTTTTGGTTGAAGCTACAGCTGATCAGCAAAAGCTGCTGTTCAAAAATTCTCCTCAAAATAGGGGAAAGTGGTGCAATGTTGGACTATGGAAATACACTAGGCATCCAAATTATTTTGGTGAGATATTCCTTTGGTGGGGAGTATTTGTGGCTTCCACACCTGTATTGGATGGTGCAGAGTGGCTGGTAATTCTTGGACCGATCTTTCTCACGTTGTTACTTCTTTTCCTCAGTGGCATACCATTGCTAGAGGAATCTGCAGATAAGAAGTATGGAAATATGGATGGATACAGGCTCTATAAAAGATCAACCAGCCCTCTAATTCCGTTACCCCCAGTCCTGTACAAGAACTTGCCCTCGTGGTTCAAAGCAACTTTTCTCTTTGAATTTCCCCTGTATAGTCGTAATCTTCCTCAAGAACCACTGAACTGGTGTAGAACAAGCCCGATAGAAAGAAGCGACGAATTGAAGATTGCCCCTAATAGTATTGTTCCACGTAAAAACTCAATCACAACTGCAATATCAAGAAAGAAAGCAGAGGAAACATATATGGAACAAGAGGGGTGCAGCAGCAACTTCACCATTAGCAGTATCAGAAGATTCAGAGAACTAATGGCTAGGTCGAAACAGACCCCAGATCACCCACCTTACTCTGAGCGCGCAATCGTCCGCTGGTCTCCAAAAGAGGAGGACGACCATCTTCTTCAGTTTCAGATTGAGGACGAGTTCGACATTTCTGGTTTGAAGCTCATCCAAGTTCCCAAGCGGGCCCACCACTTCAGAGCTACCCATAATCCACCACCACCACCACCACCACCACCACCCATTATGGAAAAGAAGAGCAATCTAGAGTCAGAATTCTTCACAGAATATGGAGAGGCAAGCCGGTACCAAGTTCAGGAGGTCATTGGGAAAGGAAGTTATGGTGTTGTGGGTTCTGCGGTTGACACCCACACCGGAGAAAAGGTTGCAATCAAGAAGATTAATGATGTGTTTGAGCATGTCTCAGATGCTACAAGGATCCTGAGAGAAATCAAGCTTCTTCGTTTGCTTCGTCATCCTGATATCGTTGAAATAAAGCACATTATGCTTCCTCCTTCAAGACGAGAGTTCAGAGATATCTATGTTGTGTTTGAGTTGATGGAATCAGACCTCCACCAGGTTATCAAGGCAAATGATGATCTTACCCCCGAGCATTATCAGTTTTTCCTGTACCAGCTTCTTCGTGGTTTAAAGTATATTCATACAGCAAATGTATTTCATCGAGATTTAAAGCCAAAAAATATCCTTGCTAATGCTGACTGCAAATTAAAGATATGTGACTTTGGGCTTGCTCGAGTATCTTTCAATGATGCCCCATCTGCTATTTTTTGGACTGATTATGTTGCAACTCGATGGTACCGAGCCCCTGAACTTTGTGGCTCATTTTTCTCAAAATATACTCCTGCAATTGATATCTGGAGCATAGGATGCATATTTGCAGAAATACTCACTGGAAAACCCCTGTTTCCTGGGAAAAACGTGGTGCACCAATTGGATCTCATGACTGATTTGCTTGGCACGCCTTCTTCAGAATCCATTGCAAGGATTCGGAATGAAAAAGCAAGAAGGTATCTTAGTAGCATGCGAAAAAAACAACCAGTTCCCTTCACACATAAGTTCCCTAATGCAGATCCGTTGGCTCTTCGCCTGTTGGAGCAACTTCTTGCATTTGATCCCAAAGATCGTCCGACAGCTGAAGAGGCATTAGCTGATCCATACTTTCATGGTTTGGCAAATGTTGATCGTGAGCCGTCCACTCAACCCATTTCAAAACTTGAATTTGAGTTTGAGCGAAGGAAATTGACAAAAGATGATGTCAGAGAGTTGATTTACAGGGAGATTTTAGAGTATCATCCCCAGATGCTGCAGGAGTATCTTCGAGGGGAGATCAAACGAGCAGCTTTATGTATCCTAGGTGAAAGGGGCACTCCTCCACTCCAAAGGCAGCATGCCTCCTTGCCCAGAGAGCGGGTTCCTGCACCCAAGGAGGATGCTGACCAAAGCAATGAATCAGAAAGGACTGCCGCTTCTGTTGCCACAACTCTCCACAGCCCTCCATCTGATGGCTCTGATAATCCAAATGCAAATGGACCTAGCAAGACACAGTACACTCCAGTATCTAGTCGCAGCCTGTTGAAGAGTGCCAGCATCAGTGCTTCCAAGTGTATAGGTGTAGTGAAAAAAGATTCGCAGGAGGATCCAATTGCTGAGGTCAACGATGAGTCAGTTGATGGTTTGGCCCAAAAGGTCGAAGCTCTTCGTGCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04016 map04016

Pfam Domains

Protein Families

Pkinase

Protein Analysis

924

Amino Acids

105.0

Weight (kDa)

7.09

Isoelectric Point (pI)

43.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF1295	PF06966	24 - 259	1.5e-72	Protein of unknown function (DUF1295)
Pkinase	PF00069	452 - 743	8.7e-66	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	453 - 662	6.1e-31	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006999)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18150 AT1G18150 AT1G18150 AT1G73670 AT3G18040 AT3G18040 AT3G18040 AT3G18040 AT3G18040
fragaria_vesca	FvH4_5g17180 FvH4_5g17180 FvH4_5g17180 FvH4_5g17180 FvH4_5g17180
malus_domestica	MD06G1230300.v1.1 MD14G1234900.v1.1
prunus_persica	Prupe.5G231400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0178621
rosa_laevigata	RLG00000005429
rosa_multiflora	Rmu_sc0002320.1_g000005
rosa_roxburghii	Rroxscaffold_3G00274750
rosa_rugosa	Rorug06G0418500
rosa_samantha	Rh7AG017200 Rh7CG017400
rosa_wichuraiana	Rw7G001390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	2 cut(s)	1353, 1863
AccB1I	GGYRCC	2 cut(s)	1353, 1863
AccB7I	CCANNNNNTGG	2 cut(s)	28, 2570
AccBSI	CCGCTC	1 cut(s)	2476
AccII	CGCG	1 cut(s)	1125
AciI	CCGC	6 cut(s)	431, 1135, 1231, 1406, 2476, 2532
AclWI	GGATC	9 cut(s)	300, 1480, 1493, 2010, 2132, 2174, 2213, 2699, 2712
AcsI	RAATTY	5 cut(s)	274, 511, 851, 1322, 2285
AcuI	CTGAAG	4 cut(s)	1154, 1228, 2019, 2223
AfaI	GTAC	6 cut(s)	127, 809, 1355, 1679, 1865, 2615
AfiI	CCNNNNNNNGG	7 cut(s)	28, 601, 1363, 1624, 2049, 2475, 2570
AjnI	CCWGG	2 cut(s)	1623, 1975
Alw21I	GWGCWC	1 cut(s)	1995
Alw26I	GTCTC	2 cut(s)	1146, 1474
Alw44I	GTGCAC	1 cut(s)	1991
AlwI	GGATC	9 cut(s)	300, 1480, 1493, 2010, 2132, 2174, 2213, 2699, 2712
AlwNI	CAGNNNCTG	1 cut(s)	2371
Ama87I	CYCGRG	2 cut(s)	1655, 1800
AoxI	GGCC	2 cut(s)	1233, 2745
ApaI	GGGCCC	1 cut(s)	1237
ApaLI	GTGCAC	1 cut(s)	1991
ApeKI	GCWGC	8 cut(s)	428, 499, 1032, 1035, 2371, 2405, 2452, 2634
ApoI	RAATTY	5 cut(s)	274, 511, 851, 1322, 2285
AseI	ATTAAT	1 cut(s)	1449
Asp700I	GAANNNNTTC	1 cut(s)	2763
Asp718I	GGTACC	2 cut(s)	1353, 1863
AspA2I	CCTAGG	1 cut(s)	2419
AspLEI	GCGC	3 cut(s)	88, 1125, 1127
AspS9I	GGNCC	5 cut(s)	662, 1233, 1234, 2597, 2746
AsuHPI	GGTGA	4 cut(s)	596, 1036, 1097, 2435
AvaI	CYCGRG	2 cut(s)	1655, 1800
AvaII	GGWCC	2 cut(s)	662, 2597
AvrII	CCTAGG	1 cut(s)	2419
BaeGI	GKGCMC	3 cut(s)	1237, 1995, 2435
BaeI	ACNNNNGTAYC	2 cut(s)	2607, 2640
BamHI	GGATCC	2 cut(s)	1485, 2704
BanI	GGYRCC	2 cut(s)	1353, 1863
BanII	GRGCYC	3 cut(s)	173, 1237, 1873
BauI	CACGAG	1 cut(s)	823
BbsI	GAAGAC	1 cut(s)	237
Bbv12I	GWGCWC	1 cut(s)	1995
BbvCI	CCTCAGC	1 cut(s)	2715
BbvI	GCAGC	8 cut(s)	415, 486, 1044, 1047, 2358, 2417, 2464, 2646
BceAI	ACGGC	1 cut(s)	2242
BcgI	CGANNNNNNTGC	2 cut(s)	45, 79
BciT130I	CCWGG	2 cut(s)	1625, 1977
BciVI	GTATCC	2 cut(s)	746, 2426
BclI	TGATCA	1 cut(s)	487
BcoDI	GTCTC	2 cut(s)	1146, 1474
BfaI	CTAG	7 cut(s)	564, 713, 1083, 1313, 2420, 2601, 2628
BfmI	CTRYAG	3 cut(s)	480, 723, 2372
BfuI	GTATCC	2 cut(s)	746, 2426
BisI	GCNGC	9 cut(s)	429, 500, 1033, 1036, 2372, 2406, 2453, 2532, 2635
BlnI	CCTAGG	1 cut(s)	2419
BlsI	GCNGC	9 cut(s)	430, 501, 1034, 1037, 2373, 2407, 2454, 2533, 2636
Bme1390I	CCNGG	2 cut(s)	1625, 1977
Bme18I	GGWCC	2 cut(s)	662, 2597
BmeT110I	CYCGRG	2 cut(s)	1655, 1800
BmgT120I	GGNCC	5 cut(s)	662, 1233, 1234, 2597, 2746
BmiI	GGNNCC	6 cut(s)	1235, 1355, 1487, 1865, 2481, 2706
BmrFI	CCNGG	2 cut(s)	1625, 1977
BmrI	ACTGGG	1 cut(s)	794
BmsI	GCATC	7 cut(s)	577, 1465, 1807, 1925, 2358, 2488, 2664
BmuI	ACTGGG	1 cut(s)	794
BpiI	GAAGAC	1 cut(s)	237
BplI	GAGNNNNNCTC	2 cut(s)	1454, 1486
BpmI	CTGGAG	2 cut(s)	1945, 2604
Bpu10I	CCTNAGC	1 cut(s)	2715
BpuEI	CTTGAG	2 cut(s)	77, 864
BsaAI	YACGTR	1 cut(s)	962
BsaI	GGTCTC	1 cut(s)	1146
BsaJI	CCNNGG	3 cut(s)	1976, 2419, 2490
BsaWI	WCCGGW	1 cut(s)	1421
BsaXI	ACNNNNNCTCC	6 cut(s)	247, 277, 597, 627, 1416, 1446
Bsc4I	CCNNNNNNNGG	7 cut(s)	28, 601, 1363, 1624, 2049, 2475, 2570
Bse118I	RCCGGY	1 cut(s)	1350
Bse1I	ACTGG	6 cut(s)	336, 800, 899, 1963, 2105, 2621
Bse3DI	GCAATG	5 cut(s)	288, 547, 707, 2043, 2518
BseBI	CCWGG	2 cut(s)	1625, 1977
BseDI	CCNNGG	3 cut(s)	1976, 2419, 2490
BseGI	GGATG	9 cut(s)	449, 568, 640, 754, 1215, 1522, 1940, 2359, 2503
BseLI	CCNNNNNNNGG	7 cut(s)	28, 601, 1363, 1624, 2049, 2475, 2570
BseMI	GCAATG	5 cut(s)	288, 547, 707, 2043, 2518
BseMII	CTCAG	6 cut(s)	222, 709, 1110, 1481, 1485, 2706
BseNI	ACTGG	6 cut(s)	336, 800, 899, 1963, 2105, 2621
BsePI	GCGCGC	1 cut(s)	1123
BseRI	GAGGAG	3 cut(s)	507, 1166, 2427
BseSI	GKGCMC	3 cut(s)	1237, 1995, 2435
BseXI	GCAGC	8 cut(s)	415, 486, 1044, 1047, 2358, 2417, 2464, 2646
BsgI	GTGCAG	3 cut(s)	660, 1051, 2469
Bsh1236I	CGCG	1 cut(s)	1125
BshFI	GGCC	2 cut(s)	1235, 2747
BshNI	GGYRCC	2 cut(s)	1353, 1863
BsiHKAI	GWGCWC	1 cut(s)	1995
BsiHKCI	CYCGRG	2 cut(s)	1655, 1800
BsiSI	CCGG	3 cut(s)	120, 1351, 1422
BslFI	GGGAC	1 cut(s)	268
BslI	CCNNNNNNNGG	7 cut(s)	28, 601, 1363, 1624, 2049, 2475, 2570
BsmAI	GTCTC	2 cut(s)	1146, 1474
BsmFI	GGGAC	1 cut(s)	268
BsnI	GGCC	2 cut(s)	1235, 2747
Bso31I	GGTCTC	1 cut(s)	1146
BsoBI	CYCGRG	2 cut(s)	1655, 1800
Bsp120I	GGGCCC	1 cut(s)	1233
Bsp1286I	GDGCHC	5 cut(s)	173, 1237, 1873, 1995, 2435
Bsp1407I	TGTACA	1 cut(s)	807
BspACI	CCGC	6 cut(s)	431, 1135, 1231, 1406, 2476, 2532
BspANI	GGCC	2 cut(s)	1235, 2747
BspCNI	CTCAG	6 cut(s)	221, 708, 1111, 1482, 1484, 2707
BspFNI	CGCG	1 cut(s)	1125
BspHI	TCATGA	1 cut(s)	2007
BspLI	GGNNCC	6 cut(s)	1235, 1355, 1487, 1865, 2481, 2706
BspMAI	CTGCAG	2 cut(s)	727, 2376
BspPI	GGATC	9 cut(s)	300, 1480, 1493, 2010, 2132, 2174, 2213, 2699, 2712
BspQI	GCTCTTC	3 cut(s)	1298, 2154, 2769
BspT107I	GGYRCC	2 cut(s)	1353, 1863
BspTNI	GGTCTC	1 cut(s)	1146
BsrBI	CCGCTC	1 cut(s)	2476
BsrDI	GCAATG	5 cut(s)	288, 547, 707, 2043, 2518
BsrFI	RCCGGY	1 cut(s)	1350
BsrGI	TGTACA	1 cut(s)	807
BsrI	ACTGG	6 cut(s)	336, 800, 899, 1963, 2105, 2621
BssAI	RCCGGY	1 cut(s)	1350
BssECI	CCNNGG	3 cut(s)	1976, 2419, 2490
BssHII	GCGCGC	1 cut(s)	1123
BssSI	CACGAG	1 cut(s)	823
BssT1I	CCWWGG	2 cut(s)	2419, 2490
Bst2BI	CACGAG	1 cut(s)	823
Bst2UI	CCWGG	2 cut(s)	1625, 1977
Bst4CI	ACNGT	7 cut(s)	10, 52, 189, 259, 373, 391, 2613
Bst6I	CTCTTC	6 cut(s)	426, 1298, 2154, 2199, 2639, 2769
BstAPI	GCANNNNNTGC	3 cut(s)	499, 1552, 1935
BstAUI	TGTACA	1 cut(s)	807
BstBAI	YACGTR	1 cut(s)	962
BstC8I	GCNNGC	9 cut(s)	315, 1125, 1233, 1348, 1797, 2027, 2090, 2457, 2653
BstDEI	CTNAG	7 cut(s)	208, 695, 1119, 1471, 1490, 2081, 2715
BstENI	CCTNNNNNAGG	1 cut(s)	1622
BstF5I	GGATG	9 cut(s)	449, 568, 640, 754, 1215, 1522, 1940, 2359, 2503
BstFNI	CGCG	1 cut(s)	1125
BstHHI	GCGC	3 cut(s)	88, 1125, 1127
BstMAI	GTCTC	2 cut(s)	1146, 1474
BstNI	CCWGG	2 cut(s)	1625, 1977
BstNSI	RCATGY	3 cut(s)	1469, 2092, 2459
BstSCI	CCNGG	2 cut(s)	1623, 1975
BstSFI	CTRYAG	3 cut(s)	480, 723, 2372
BstSLI	GKGCMC	3 cut(s)	1237, 1995, 2435
BstUI	CGCG	1 cut(s)	1125
BstV1I	GCAGC	8 cut(s)	415, 486, 1044, 1047, 2358, 2417, 2464, 2646
BstV2I	GAAGAC	1 cut(s)	237
BstX2I	RGATCY	4 cut(s)	1485, 2002, 2137, 2704
BstXI	CCANNNNNNTGG	1 cut(s)	894
BstYI	RGATCY	4 cut(s)	1485, 2002, 2137, 2704
BsuI	GTATCC	2 cut(s)	746, 2426
BsuRI	GGCC	2 cut(s)	1235, 2747
BtsCI	GGATG	9 cut(s)	449, 568, 640, 754, 1215, 1522, 1940, 2359, 2503
BtsI	GCAGTG	2 cut(s)	36, 81
BtsIMutI	CAGTG	9 cut(s)	36, 48, 81, 108, 396, 703, 887, 1956, 2665
Cac8I	GCNNGC	9 cut(s)	315, 1125, 1233, 1348, 1797, 2027, 2090, 2457, 2653
CaiI	CAGNNNCTG	1 cut(s)	2371
CciI	TCATGA	1 cut(s)	2007
CfoI	GCGC	3 cut(s)	88, 1125, 1127
Cfr10I	RCCGGY	1 cut(s)	1350
Cfr13I	GGNCC	5 cut(s)	662, 1233, 1234, 2597, 2746
CsiI	ACCWGGT	1 cut(s)	1623
Csp6I	GTAC	6 cut(s)	126, 808, 1354, 1678, 1864, 2614
CviAII	CATG	6 cut(s)	174, 1466, 2008, 2089, 2231, 2456
CviQI	GTAC	6 cut(s)	126, 808, 1354, 1678, 1864, 2614
DdeI	CTNAG	7 cut(s)	208, 695, 1119, 1471, 1490, 2081, 2715
DraI	TTTAAA	2 cut(s)	1698, 1737
Eam1104I	CTCTTC	6 cut(s)	426, 1298, 2154, 2199, 2639, 2769
EarI	CTCTTC	6 cut(s)	426, 1298, 2154, 2199, 2639, 2769
Eco130I	CCWWGG	2 cut(s)	2419, 2490
Eco24I	GRGCYC	3 cut(s)	173, 1237, 1873
Eco31I	GGTCTC	1 cut(s)	1146
Eco32I	GATATC	3 cut(s)	1531, 1585, 1921
Eco47I	GGWCC	2 cut(s)	662, 2597
Eco57I	CTGAAG	4 cut(s)	1154, 1228, 2019, 2223
Eco88I	CYCGRG	2 cut(s)	1655, 1800
EcoNI	CCTNNNNNAGG	1 cut(s)	1622
EcoRI	GAATTC	1 cut(s)	1322
EcoRII	CCWGG	2 cut(s)	1623, 1975
EcoRV	GATATC	3 cut(s)	1531, 1585, 1921
EcoT14I	CCWWGG	2 cut(s)	2419, 2490
EcoT22I	ATGCAT	1 cut(s)	1940
EcoT38I	GRGCYC	3 cut(s)	173, 1237, 1873
ErhI	CCWWGG	2 cut(s)	2419, 2490
FaeI	CATG	6 cut(s)	177, 1469, 2011, 2092, 2234, 2459
FaqI	GGGAC	1 cut(s)	268
FatI	CATG	6 cut(s)	173, 1465, 2007, 2088, 2230, 2455
FauI	CCCGC	2 cut(s)	1224, 2469
FbaI	TGATCA	1 cut(s)	487
Fnu4HI	GCNGC	9 cut(s)	429, 500, 1033, 1036, 2372, 2406, 2453, 2532, 2635
FokI	GGATG	9 cut(s)	456, 555, 647, 761, 1202, 1509, 1947, 2346, 2510
FriOI	GRGCYC	3 cut(s)	173, 1237, 1873
Fsp4HI	GCNGC	9 cut(s)	429, 500, 1033, 1036, 2372, 2406, 2453, 2532, 2635
FspBI	CTAG	7 cut(s)	564, 713, 1083, 1313, 2420, 2601, 2628
GlaI	GCGC	3 cut(s)	87, 1124, 1126
GluI	GCNGC	9 cut(s)	429, 500, 1033, 1036, 2372, 2406, 2453, 2532, 2635
GsuI	CTGGAG	2 cut(s)	1945, 2604
HaeIII	GGCC	2 cut(s)	1235, 2747
HapII	CCGG	3 cut(s)	120, 1351, 1422
HhaI	GCGC	3 cut(s)	88, 1125, 1127
Hin1II	CATG	6 cut(s)	177, 1469, 2011, 2092, 2234, 2459
Hin6I	GCGC	3 cut(s)	86, 1123, 1125
HinP1I	GCGC	3 cut(s)	86, 1123, 1125
HincII	GTYRAC	2 cut(s)	1411, 2722
HindII	GTYRAC	2 cut(s)	1411, 2722
HindIII	AAGCTT	1 cut(s)	1502
HpaII	CCGG	3 cut(s)	120, 1351, 1422
HphI	GGTGA	4 cut(s)	596, 1036, 1097, 2435
Hpy166II	GTNNAC	6 cut(s)	380, 1411, 1993, 2262, 2616, 2722
Hpy8I	GTNNAC	6 cut(s)	380, 1411, 1993, 2262, 2616, 2722
Hpy99I	CGWCG	2 cut(s)	300, 929
HpyAV	CCTTC	5 cut(s)	1572, 2040, 2067, 2122, 2295
HpyCH4III	ACNGT	7 cut(s)	10, 52, 189, 259, 373, 391, 2613
HpyCH4IV	ACGT	4 cut(s)	298, 677, 961, 1986
HpyF3I	CTNAG	7 cut(s)	208, 695, 1119, 1471, 1490, 2081, 2715
HpySE526I	ACGT	4 cut(s)	298, 677, 961, 1986
Hsp92II	CATG	6 cut(s)	177, 1469, 2011, 2092, 2234, 2459
HspAI	GCGC	3 cut(s)	86, 1123, 1125
KpnI	GGTACC	2 cut(s)	1357, 1867
Ksp22I	TGATCA	1 cut(s)	487
LguI	GCTCTTC	3 cut(s)	1298, 2154, 2769
LmnI	GCTCC	2 cut(s)	1926, 2161
Lsp1109I	GCAGC	8 cut(s)	415, 486, 1044, 1047, 2358, 2417, 2464, 2646
LweI	GCATC	7 cut(s)	577, 1465, 1807, 1925, 2358, 2488, 2664
MabI	ACCWGGT	1 cut(s)	1623
MaeI	CTAG	7 cut(s)	564, 713, 1083, 1313, 2420, 2601, 2628
MaeII	ACGT	4 cut(s)	298, 677, 961, 1986
MaeIII	GTNAC	6 cut(s)	46, 106, 385, 681, 792, 1784
MbiI	CCGCTC	1 cut(s)	2476
MfeI	CAATTG	3 cut(s)	1914, 1997, 2709
MflI	RGATCY	4 cut(s)	1485, 2002, 2137, 2704
MhlI	GDGCHC	5 cut(s)	173, 1237, 1873, 1995, 2435
MlyI	GAGTC	3 cut(s)	11, 1325, 2738
MmeI	TCCRAC	3 cut(s)	526, 2139, 2219
Mph1103I	ATGCAT	1 cut(s)	1940
MroXI	GAANNNNTTC	1 cut(s)	2763
MseI	TTAA	5 cut(s)	396, 1449, 1697, 1736, 1775
MspA1I	CMGCKG	3 cut(s)	485, 1137, 2201
MspI	CCGG	3 cut(s)	120, 1351, 1422
MspR9I	CCNGG	2 cut(s)	1625, 1977
MunI	CAATTG	3 cut(s)	1914, 1997, 2709
MvaI	CCWGG	2 cut(s)	1625, 1977
MvnI	CGCG	1 cut(s)	1125
NlaIII	CATG	6 cut(s)	177, 1469, 2011, 2092, 2234, 2459
NlaIV	GGNNCC	6 cut(s)	1235, 1355, 1487, 1865, 2481, 2706
NmuCI	GTSAC	3 cut(s)	46, 106, 1784
NsiI	ATGCAT	1 cut(s)	1940
NspI	RCATGY	3 cut(s)	1469, 2092, 2459
PaeI	GCATGC	2 cut(s)	2092, 2459
PaeR7I	CTCGAG	1 cut(s)	1800
PagI	TCATGA	1 cut(s)	2007
PauI	GCGCGC	1 cut(s)	1123
PciSI	GCTCTTC	3 cut(s)	1298, 2154, 2769
PcsI	WCGNNNNNNNCGW	2 cut(s)	1516, 1864
PdmI	GAANNNNTTC	1 cut(s)	2763
PfeI	GAWTC	7 cut(s)	719, 1065, 1610, 2039, 2053, 2516, 2693
PflMI	CCANNNNNTGG	2 cut(s)	28, 2570
PkrI	GCNGC	9 cut(s)	430, 501, 1034, 1037, 2373, 2407, 2454, 2533, 2636
PleI	GAGTC	3 cut(s)	11, 1324, 2737
PpsI	GAGTC	3 cut(s)	11, 1324, 2737
Ppu21I	YACGTR	1 cut(s)	962
PshBI	ATTAAT	1 cut(s)	1449
Psp6I	CCWGG	2 cut(s)	1623, 1975
PspGI	CCWGG	2 cut(s)	1623, 1975
PspN4I	GGNNCC	6 cut(s)	1235, 1355, 1487, 1865, 2481, 2706
PspOMI	GGGCCC	1 cut(s)	1233
PspPI	GGNCC	5 cut(s)	662, 1233, 1234, 2597, 2746
PspXI	VCTCGAGB	1 cut(s)	1800
PstI	CTGCAG	2 cut(s)	727, 2376
PstNI	CAGNNNCTG	1 cut(s)	2371
PsuI	RGATCY	4 cut(s)	1485, 2002, 2137, 2704
PteI	GCGCGC	1 cut(s)	1123
PvuII	CAGCTG	2 cut(s)	485, 2201
RsaI	GTAC	6 cut(s)	127, 809, 1355, 1679, 1865, 2615
RsaNI	GTAC	6 cut(s)	126, 808, 1354, 1678, 1864, 2614
SapI	GCTCTTC	3 cut(s)	1298, 2154, 2769
SaqAI	TTAA	5 cut(s)	396, 1449, 1697, 1736, 1775
SatI	GCNGC	9 cut(s)	429, 500, 1033, 1036, 2372, 2406, 2453, 2532, 2635
Sau96I	GGNCC	5 cut(s)	662, 1233, 1234, 2597, 2746
SchI	GAGTC	3 cut(s)	11, 1325, 2738
ScrFI	CCNGG	2 cut(s)	1625, 1977
SduI	GDGCHC	5 cut(s)	173, 1237, 1873, 1995, 2435
SexAI	ACCWGGT	1 cut(s)	1623
SfaNI	GCATC	7 cut(s)	577, 1465, 1807, 1925, 2358, 2488, 2664
SfcI	CTRYAG	3 cut(s)	480, 723, 2372
Sfr274I	CTCGAG	1 cut(s)	1800
SinI	GGWCC	2 cut(s)	662, 2597
SlaI	CTCGAG	1 cut(s)	1800
SmlI	CTYRAG	3 cut(s)	92, 879, 1800
SmoI	CTYRAG	3 cut(s)	92, 879, 1800
SphI	GCATGC	2 cut(s)	2092, 2459
SsiI	CCGC	6 cut(s)	431, 1135, 1231, 1406, 2476, 2532
SspMI	CTAG	7 cut(s)	564, 713, 1083, 1313, 2420, 2601, 2628
StyD4I	CCNGG	2 cut(s)	1623, 1975
StyI	CCWWGG	2 cut(s)	2419, 2490
TaaI	ACNGT	7 cut(s)	10, 52, 189, 259, 373, 391, 2613
TaiI	ACGT	4 cut(s)	301, 680, 964, 1989
TaqI	TCGA	9 cut(s)	99, 295, 1088, 1194, 1729, 1801, 1858, 2386, 2757
TaqII	GACCGA	1 cut(s)	679
TatI	WGTACW	2 cut(s)	807, 2613
TauI	GCSGC	1 cut(s)	2534
TfiI	GAWTC	7 cut(s)	719, 1065, 1610, 2039, 2053, 2516, 2693
Tru1I	TTAA	5 cut(s)	396, 1449, 1697, 1736, 1775
Tru9I	TTAA	5 cut(s)	396, 1449, 1697, 1736, 1775
TscAI	CASTG	9 cut(s)	43, 55, 88, 115, 396, 703, 894, 1963, 2665
TseFI	GTSAC	3 cut(s)	46, 106, 1784
TseI	GCWGC	8 cut(s)	428, 499, 1032, 1035, 2371, 2405, 2452, 2634
Tsp45I	GTSAC	3 cut(s)	46, 106, 1784
TspDTI	ATGAA	7 cut(s)	193, 321, 1697, 1715, 2076, 2219, 2529
TspGWI	ACGGA	2 cut(s)	780, 2130
TspRI	CASTG	9 cut(s)	43, 55, 88, 115, 396, 703, 894, 1963, 2665
Van91I	CCANNNNNTGG	2 cut(s)	28, 2570
VneI	GTGCAC	1 cut(s)	1991
VpaK11BI	GGWCC	2 cut(s)	662, 2597
VspI	ATTAAT	1 cut(s)	1449
XagI	CCTNNNNNAGG	1 cut(s)	1622
XapI	RAATTY	5 cut(s)	274, 511, 851, 1322, 2285
XbaI	TCTAGA	1 cut(s)	1312
XceI	RCATGY	3 cut(s)	1469, 2092, 2459
XcmI	CCANNNNNNNNNTGG	3 cut(s)	49, 628, 1688
XhoI	CTCGAG	1 cut(s)	1800
XmaJI	CCTAGG	1 cut(s)	2419
XmnI	GAANNNNTTC	1 cut(s)	2763
XspI	CTAG	7 cut(s)	564, 713, 1083, 1313, 2420, 2601, 2628
Zsp2I	ATGCAT	1 cut(s)	1940

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.