Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0006999

Physical Location & Seq

Genomic Coordinates Reverse (-)

9798966 .. 9803681

Gene Structure 4716 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g17180.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2076 bp

ATGCATTATTGCCTCGATCGATATCCACAGCAACAAACAACAAAGCCCATCCCCAACCTTGGAGCTCATCGGGCCAAAACCCTCCGAGAAACCAGACAGGAAGCTCAAGACCATCGACTCTGCAGATGTCAAACCCTCGGAAGTAGGCCAAGTTCCGACAAGTGCGGGCAATGCTGCAAATCGTGTGGCTGTGAATCATCCTTGGAGAGAGAGAAACACAAGTGCTATATGGGGAGTGGAGCAACCTTGGTGGACGGTGTTCGTCGCTGGTTTCAACGTCGTACTAGTACCACTTCCTCTTCCAAACCTATTAATAATCCGAACCCGAACCCGAATCGGAATCCGAATAATAACAACCATGATTATAATGACAGCGATTTAAGCGCGCAATCATCCACTGGTCTCCAAAAAGAGGAGGAAGACGATCTTCTTCAGTTTCAGGTTGAGGACGACTTCGACATTTCTGGTTTGAAGCTCATCCGAGTTCCCAAACGGGCCCACCATTTCAAAGCTGCCCACAATCCACCACCACCCATTATGGAAAAGAAGAGCAATCTAGAGTCAGAATTCTTCACGGAATATGGAGAGGCAAGCCGGTACCAAGTTCAGGAGGTCATTGGGAAAGGAAGTTACGGTGTTGTGGGTTCTGCGGTTGACACCCACACTGGAGAAAAGGTTGCGATTAAGAAGATTAATGATGTGTTTGAGCATGTCTCAGATGCTACAAGGATCTTGAGAGAAATCAAGCTTCTTCGTTTGCTTCGTCATCCTGATATCGTTGAGATAAAGCACATCATGCTTCCTCCTTCACGACGAGAATTCAGAGATATCTATGTCGTGTTTGAGTTGATGGAATCTGACCTCCACCAGGTTATCAAGGCAAATGATGATCTTACCCCTGAGCATTATCAGTTTTTCCTGTACCAGCTTCTTCGTGGTCTAAAGTATATTCATACAGCAAATGTGTTTCATCGAGATTTAAAGCCAAAAAATATCCTTGCAAATGCTGACTGCAAATTAAAGATATGTGACTTTGGGCTTGCTCGAGTATCTTTCAATGATGCCCCATCTGCTATTTTTTGGACTGATTATGTTGCAACTCGATGGTACCGAGCCCCTGAACTTTGTGGCTCATTTTTCTCAAAATATACTCCTGCAATTGATATCTGGAGCATAGGATGCATATTTGCAGAAATACTCACCGGAAAACCCCTGTTTCCTGGTAAAAATGTGGTACACCAATTAGATCTCATGACTGATTTGCTTGGCACGCCTTCTTCAGAATCCATTGCAAGGATTCGGAATGAAAAAGCAAGAAGGTATCTTAGTAGCATGCGGAAAAAACAACCAGTTCCCTTCACACATAAGTTCCCTAATGCAGATCCATTGGCTCTTCGCCTGCTGGAGCAACTTCTTGCATTTGATCCCAAAGATCGTCCGACAGCTGAAGAGGCATTAGCTGATCCATACTTTCATGGTTTGGCAAATGTTGATCGTGAGCCGGCCACTCAACCCATTTCGAAACTTGAGTTTGAGTTTGAGCGAAGGAAATTGACAAAAGATGATGTTAGAGAGTTAATTTACAGGGAGATTTTAGAGTATCACCCCCAGATGCTGCAGGAGTATCTCCGAGGGGGAGATCAAACGAGCAGCTTTATGTATCCTAGTGGTGTTGATCGATTCAAGCGACAGTTTGCACATCTTGAGGAAAAATATGGTAAAGGTGAAAAAGGCACCCATCTGCTCCAAAGGCAACATGCCTCCTTGCCGAGAGAGCGCGTTCCTGCACCCAAGGAGGATGCTGACCAAAGTGAGGAATTGGAAAGGACTGCCGCTTCTGTTGCCACATCTCTTCACAGCCCTCCATCTGATGGCTCTGATAATCTAAATGCAAATGGACCTAGCAAGATAGTCTATACTCCAGTATCTAGTCGCAGCCTGTTGAAGAGTGCCAGCATTAGTGCTTCCAAGTGTATAGGTGTAGTGAAAAAAGATTCACAGGAGGATCCAATTGCTGAGGTCAACGATGAGTCAGTTGATGGTTTGGCCCAAAAGGTTGCAGCTCTTCGTGCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04016 map04016

Pfam Domains

Protein Families

Pkinase

Protein Analysis

692

Amino Acids

78.45

Weight (kDa)

7.86

Isoelectric Point (pI)

44.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	200 - 491	3.4e-66	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	201 - 416	2.5e-31	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006999)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18150 AT1G18150 AT1G18150 AT1G73670 AT3G18040 AT3G18040 AT3G18040 AT3G18040 AT3G18040
fragaria_vesca	FvH4_5g17180 FvH4_5g17180 FvH4_5g17180 FvH4_5g17180 FvH4_5g17180
malus_domestica	MD06G1230300.v1.1 MD14G1234900.v1.1
prunus_persica	Prupe.5G231400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0178621
rosa_laevigata	RLG00000005429
rosa_multiflora	Rmu_sc0002320.1_g000005
rosa_roxburghii	Rroxscaffold_3G00274750
rosa_rugosa	Rorug06G0418500
rosa_samantha	Rh7AG017200 Rh7CG017400
rosa_wichuraiana	Rw7G001390

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	366
Acc65I	GGTACC	2 cut(s)	597, 1107
AccB1I	GGYRCC	3 cut(s)	597, 1107, 1733
AccB7I	CCANNNNNTGG	1 cut(s)	1871
AccII	CGCG	2 cut(s)	386, 1779
AciI	CCGC	4 cut(s)	165, 650, 1336, 1833
AclWI	GGATC	6 cut(s)	737, 1376, 1418, 1457, 2000, 2013
AcoI	YGGCCR	1 cut(s)	1503
AcsI	RAATTY	2 cut(s)	566, 818
AcuI	CTGAAG	3 cut(s)	416, 1263, 1467
AfaI	GTAC	6 cut(s)	283, 289, 599, 923, 1109, 1236
AfiI	CCNNNNNNNGG	7 cut(s)	59, 412, 607, 868, 1293, 1813, 1871
AgsI	TTSAA	6 cut(s)	275, 472, 508, 1057, 1684, 1945
AhlI	ACTAGT	1 cut(s)	284
AjnI	CCWGG	2 cut(s)	867, 1219
Alw21I	GWGCWC	1 cut(s)	67
Alw26I	GTCTC	2 cut(s)	407, 718
AlwI	GGATC	6 cut(s)	737, 1376, 1418, 1457, 2000, 2013
AlwNI	CAGNNNCTG	1 cut(s)	1615
Ama87I	CYCGRG	1 cut(s)	1044
AoxI	GGCC	5 cut(s)	72, 146, 495, 1503, 2046
ApaI	GGGCCC	1 cut(s)	499
ApeKI	GCWGC	6 cut(s)	174, 512, 1615, 1650, 1935, 2060
ApoI	RAATTY	2 cut(s)	566, 818
AseI	ATTAAT	2 cut(s)	312, 693
Asp718I	GGTACC	2 cut(s)	597, 1107
AspLEI	GCGC	3 cut(s)	386, 388, 1779
AspS9I	GGNCC	5 cut(s)	72, 495, 496, 1898, 2047
AsuHPI	GGTGA	3 cut(s)	1192, 1595, 1736
AsuII	TTCGAA	1 cut(s)	1520
AvaI	CYCGRG	1 cut(s)	1044
AvaII	GGWCC	1 cut(s)	1898
BaeGI	GKGCMC	1 cut(s)	499
BaeI	ACNNNNGTAYC	2 cut(s)	1908, 1941
BamHI	GGATCC	1 cut(s)	2005
BanI	GGYRCC	3 cut(s)	597, 1107, 1733
BanII	GRGCYC	3 cut(s)	67, 499, 1117
BbsI	GAAGAC	1 cut(s)	426
Bbv12I	GWGCWC	1 cut(s)	67
BbvCI	CCTCAGC	1 cut(s)	2016
BbvI	GCAGC	6 cut(s)	161, 499, 1602, 1662, 1947, 2072
BccI	CCATC	9 cut(s)	56, 120, 844, 1075, 1098, 1746, 1865, 1873, 2033
BciT130I	CCWGG	2 cut(s)	869, 1221
BciVI	GTATCC	1 cut(s)	1671
BcoDI	GTCTC	2 cut(s)	407, 718
BcuI	ACTAGT	1 cut(s)	284
BfaI	CTAG	5 cut(s)	285, 557, 1665, 1902, 1929
BfmI	CTRYAG	2 cut(s)	121, 1616
BfuI	GTATCC	1 cut(s)	1671
BglII	AGATCT	1 cut(s)	1246
BisI	GCNGC	7 cut(s)	175, 513, 1616, 1651, 1833, 1936, 2061
BlsI	GCNGC	7 cut(s)	176, 514, 1617, 1652, 1834, 1937, 2062
Bme1390I	CCNGG	2 cut(s)	869, 1221
Bme18I	GGWCC	1 cut(s)	1898
BmeT110I	CYCGRG	1 cut(s)	1044
BmgT120I	GGNCC	5 cut(s)	72, 495, 496, 1898, 2047
BmiI	GGNNCC	5 cut(s)	497, 599, 1109, 1735, 2007
BmrFI	CCNGG	2 cut(s)	869, 1221
BmsI	GCATC	5 cut(s)	709, 1051, 1169, 1602, 1789
BpiI	GAAGAC	1 cut(s)	426
BplI	GAGNNNNNCTC	2 cut(s)	698, 730
BpmI	CTGGAG	4 cut(s)	687, 1189, 1424, 1905
Bpu10I	CCTNAGC	2 cut(s)	900, 2016
Bpu14I	TTCGAA	1 cut(s)	1520
BpuEI	CTTGAG	4 cut(s)	90, 754, 1547, 1724
Bsa29I	ATCGAT	2 cut(s)	19, 1678
BsaBI	GATNNNNATC	1 cut(s)	21
BsaI	GGTCTC	1 cut(s)	407
BsaJI	CCNNGG	6 cut(s)	58, 136, 201, 246, 1630, 1791
BsaWI	WCCGGW	1 cut(s)	1202
BsaXI	ACNNNNNCTCC	2 cut(s)	660, 690
Bsc4I	CCNNNNNNNGG	7 cut(s)	59, 412, 607, 868, 1293, 1813, 1871
Bse118I	RCCGGY	2 cut(s)	594, 1501
Bse1I	ACTGG	4 cut(s)	403, 670, 1349, 1922
Bse3DI	GCAATG	2 cut(s)	176, 1287
Bse8I	GATNNNNATC	1 cut(s)	21
BseBI	CCWGG	2 cut(s)	869, 1221
BseCI	ATCGAT	2 cut(s)	19, 1678
BseDI	CCNNGG	6 cut(s)	58, 136, 201, 246, 1630, 1791
BseGI	GGATG	7 cut(s)	48, 197, 392, 477, 766, 1184, 1804
BseJI	GATNNNNATC	1 cut(s)	21
BseLI	CCNNNNNNNGG	7 cut(s)	59, 412, 607, 868, 1293, 1813, 1871
BseMI	GCAATG	2 cut(s)	176, 1287
BseMII	CTCAG	3 cut(s)	729, 891, 2007
BseNI	ACTGG	4 cut(s)	403, 670, 1349, 1922
BsePI	GCGCGC	1 cut(s)	384
BseRI	GAGGAG	1 cut(s)	428
BseSI	GKGCMC	1 cut(s)	499
BseXI	GCAGC	6 cut(s)	161, 499, 1602, 1662, 1947, 2072
BsgI	GTGCAG	1 cut(s)	1770
Bsh1236I	CGCG	2 cut(s)	386, 1779
Bsh1285I	CGRYCG	1 cut(s)	19
BshFI	GGCC	5 cut(s)	74, 148, 497, 1505, 2048
BshNI	GGYRCC	3 cut(s)	597, 1107, 1733
BshVI	ATCGAT	2 cut(s)	19, 1678
BsiEI	CGRYCG	1 cut(s)	19
BsiHKAI	GWGCWC	1 cut(s)	67
BsiHKCI	CYCGRG	1 cut(s)	1044
BsiSI	CCGG	3 cut(s)	595, 1203, 1502
BslI	CCNNNNNNNGG	7 cut(s)	59, 412, 607, 868, 1293, 1813, 1871
BsmAI	GTCTC	2 cut(s)	407, 718
BsnI	GGCC	5 cut(s)	74, 148, 497, 1505, 2048
Bso31I	GGTCTC	1 cut(s)	407
BsoBI	CYCGRG	1 cut(s)	1044
Bsp119I	TTCGAA	1 cut(s)	1520
Bsp120I	GGGCCC	1 cut(s)	495
Bsp1286I	GDGCHC	3 cut(s)	67, 499, 1117
BspACI	CCGC	4 cut(s)	165, 650, 1336, 1833
BspANI	GGCC	5 cut(s)	74, 148, 497, 1505, 2048
BspCNI	CTCAG	3 cut(s)	728, 892, 2008
BspDI	ATCGAT	2 cut(s)	19, 1678
BspFNI	CGCG	2 cut(s)	386, 1779
BspHI	TCATGA	1 cut(s)	1251
BspLI	GGNNCC	5 cut(s)	497, 599, 1109, 1735, 2007
BspMAI	CTGCAG	2 cut(s)	125, 1620
BspPI	GGATC	6 cut(s)	737, 1376, 1418, 1457, 2000, 2013
BspQI	GCTCTTC	3 cut(s)	542, 1398, 2070
BspT104I	TTCGAA	1 cut(s)	1520
BspT107I	GGYRCC	3 cut(s)	597, 1107, 1733
BspTNI	GGTCTC	1 cut(s)	407
BsrDI	GCAATG	2 cut(s)	176, 1287
BsrFI	RCCGGY	2 cut(s)	594, 1501
BsrI	ACTGG	4 cut(s)	403, 670, 1349, 1922
BssAI	RCCGGY	2 cut(s)	594, 1501
BssECI	CCNNGG	6 cut(s)	58, 136, 201, 246, 1630, 1791
BssHII	GCGCGC	1 cut(s)	384
BssT1I	CCWWGG	4 cut(s)	58, 201, 246, 1791
Bst2UI	CCWGG	2 cut(s)	869, 1221
Bst4CI	ACNGT	3 cut(s)	257, 635, 1692
Bst6I	CTCTTC	7 cut(s)	304, 542, 1398, 1443, 1857, 1940, 2070
BstAPI	GCANNNNNTGC	2 cut(s)	796, 1179
BstBI	TTCGAA	1 cut(s)	1520
BstC8I	GCNNGC	9 cut(s)	167, 386, 592, 1041, 1271, 1334, 1400, 1503, 1954
BstDEI	CTNAG	4 cut(s)	715, 900, 1325, 2016
BstENI	CCTNNNNNAGG	1 cut(s)	866
BstF5I	GGATG	7 cut(s)	48, 197, 392, 477, 766, 1184, 1804
BstFNI	CGCG	2 cut(s)	386, 1779
BstHHI	GCGC	3 cut(s)	386, 388, 1779
BstMAI	GTCTC	2 cut(s)	407, 718
BstMCI	CGRYCG	1 cut(s)	19
BstNI	CCWGG	2 cut(s)	869, 1221
BstNSI	RCATGY	3 cut(s)	713, 1336, 1760
BstSCI	CCNGG	2 cut(s)	867, 1219
BstSFI	CTRYAG	2 cut(s)	121, 1616
BstSLI	GKGCMC	1 cut(s)	499
BstUI	CGCG	2 cut(s)	386, 1779
BstV1I	GCAGC	6 cut(s)	161, 499, 1602, 1662, 1947, 2072
BstV2I	GAAGAC	1 cut(s)	426
BstX2I	RGATCY	4 cut(s)	729, 1246, 1381, 2005
BstYI	RGATCY	4 cut(s)	729, 1246, 1381, 2005
Bsu15I	ATCGAT	2 cut(s)	19, 1678
BsuI	GTATCC	1 cut(s)	1671
BsuRI	GGCC	5 cut(s)	74, 148, 497, 1505, 2048
BsuTUI	ATCGAT	2 cut(s)	19, 1678
BtsCI	GGATG	7 cut(s)	48, 197, 392, 477, 766, 1184, 1804
BtsIMutI	CAGTG	2 cut(s)	396, 663
Cac8I	GCNNGC	9 cut(s)	167, 386, 592, 1041, 1271, 1334, 1400, 1503, 1954
CaiI	CAGNNNCTG	1 cut(s)	1615
CciI	TCATGA	1 cut(s)	1251
CfoI	GCGC	3 cut(s)	386, 388, 1779
Cfr10I	RCCGGY	2 cut(s)	594, 1501
Cfr13I	GGNCC	5 cut(s)	72, 495, 496, 1898, 2047
ClaI	ATCGAT	2 cut(s)	19, 1678
CsiI	ACCWGGT	1 cut(s)	867
Csp6I	GTAC	6 cut(s)	282, 288, 598, 922, 1108, 1235
CspCI	CAANNNNNGTGG	4 cut(s)	166, 201, 231, 266
CviAII	CATG	7 cut(s)	359, 710, 796, 1252, 1333, 1475, 1757
CviQI	GTAC	6 cut(s)	282, 288, 598, 922, 1108, 1235
DdeI	CTNAG	4 cut(s)	715, 900, 1325, 2016
DraI	TTTAAA	1 cut(s)	981
EaeI	YGGCCR	1 cut(s)	1503
Eam1104I	CTCTTC	7 cut(s)	304, 542, 1398, 1443, 1857, 1940, 2070
EarI	CTCTTC	7 cut(s)	304, 542, 1398, 1443, 1857, 1940, 2070
Ecl136II	GAGCTC	1 cut(s)	65
Eco130I	CCWWGG	4 cut(s)	58, 201, 246, 1791
Eco24I	GRGCYC	3 cut(s)	67, 499, 1117
Eco31I	GGTCTC	1 cut(s)	407
Eco32I	GATATC	4 cut(s)	23, 775, 829, 1165
Eco47I	GGWCC	1 cut(s)	1898
Eco53kI	GAGCTC	1 cut(s)	65
Eco57I	CTGAAG	3 cut(s)	416, 1263, 1467
Eco88I	CYCGRG	1 cut(s)	1044
EcoICRI	GAGCTC	1 cut(s)	65
EcoNI	CCTNNNNNAGG	1 cut(s)	866
EcoRI	GAATTC	2 cut(s)	566, 818
EcoRII	CCWGG	2 cut(s)	867, 1219
EcoRV	GATATC	4 cut(s)	23, 775, 829, 1165
EcoT14I	CCWWGG	4 cut(s)	58, 201, 246, 1791
EcoT22I	ATGCAT	2 cut(s)	6, 1184
EcoT38I	GRGCYC	3 cut(s)	67, 499, 1117
ErhI	CCWWGG	4 cut(s)	58, 201, 246, 1791
FaeI	CATG	7 cut(s)	362, 713, 799, 1255, 1336, 1478, 1760
FalI	AAGNNNNNCTT	2 cut(s)	411, 443
FatI	CATG	7 cut(s)	358, 709, 795, 1251, 1332, 1474, 1756
FauI	CCCGC	1 cut(s)	158
Fnu4HI	GCNGC	7 cut(s)	175, 513, 1616, 1651, 1833, 1936, 2061
FokI	GGATG	7 cut(s)	35, 184, 379, 464, 753, 1191, 1811
FriOI	GRGCYC	3 cut(s)	67, 499, 1117
Fsp4HI	GCNGC	7 cut(s)	175, 513, 1616, 1651, 1833, 1936, 2061
FspBI	CTAG	5 cut(s)	285, 557, 1665, 1902, 1929
GlaI	GCGC	3 cut(s)	385, 387, 1778
GluI	GCNGC	7 cut(s)	175, 513, 1616, 1651, 1833, 1936, 2061
GsuI	CTGGAG	4 cut(s)	687, 1189, 1424, 1905
HaeIII	GGCC	5 cut(s)	74, 148, 497, 1505, 2048
HapII	CCGG	3 cut(s)	595, 1203, 1502
HhaI	GCGC	3 cut(s)	386, 388, 1779
Hin1II	CATG	7 cut(s)	362, 713, 799, 1255, 1336, 1478, 1760
Hin6I	GCGC	3 cut(s)	384, 386, 1777
HinP1I	GCGC	3 cut(s)	384, 386, 1777
HincII	GTYRAC	2 cut(s)	655, 2023
HindII	GTYRAC	2 cut(s)	655, 2023
HindIII	AAGCTT	1 cut(s)	746
HpaII	CCGG	3 cut(s)	595, 1203, 1502
HphI	GGTGA	3 cut(s)	1192, 1595, 1736
Hpy166II	GTNNAC	4 cut(s)	253, 655, 1237, 2023
Hpy8I	GTNNAC	4 cut(s)	253, 655, 1237, 2023
Hpy99I	CGWCG	3 cut(s)	267, 282, 816
HpyAV	CCTTC	5 cut(s)	816, 1284, 1311, 1366, 1539
HpyCH4III	ACNGT	3 cut(s)	257, 635, 1692
HpyCH4IV	ACGT	1 cut(s)	277
HpyF3I	CTNAG	4 cut(s)	715, 900, 1325, 2016
HpySE526I	ACGT	1 cut(s)	277
Hsp92II	CATG	7 cut(s)	362, 713, 799, 1255, 1336, 1478, 1760
HspAI	GCGC	3 cut(s)	384, 386, 1777
KpnI	GGTACC	2 cut(s)	601, 1111
KroI	GCCGGC	1 cut(s)	1501
KroNI	GCCGGC	1 cut(s)	1503
LguI	GCTCTTC	3 cut(s)	542, 1398, 2070
LmnI	GCTCC	5 cut(s)	62, 239, 1170, 1405, 1749
Lsp1109I	GCAGC	6 cut(s)	161, 499, 1602, 1662, 1947, 2072
LweI	GCATC	5 cut(s)	709, 1051, 1169, 1602, 1789
MabI	ACCWGGT	1 cut(s)	867
MaeI	CTAG	5 cut(s)	285, 557, 1665, 1902, 1929
MaeII	ACGT	1 cut(s)	277
MaeIII	GTNAC	2 cut(s)	629, 1028
MfeI	CAATTG	2 cut(s)	1158, 2010
MflI	RGATCY	4 cut(s)	729, 1246, 1381, 2005
MhlI	GDGCHC	3 cut(s)	67, 499, 1117
MluCI	AATT	9 cut(s)	566, 818, 1016, 1158, 1241, 1550, 1578, 1817, 2010
MlyI	GAGTC	3 cut(s)	111, 569, 2039
MmeI	TCCRAC	2 cut(s)	180, 1463
Mph1103I	ATGCAT	2 cut(s)	6, 1184
MroNI	GCCGGC	1 cut(s)	1501
MseI	TTAA	7 cut(s)	312, 380, 684, 693, 980, 1019, 1577
MspA1I	CMGCKG	1 cut(s)	1445
MspI	CCGG	3 cut(s)	595, 1203, 1502
MspR9I	CCNGG	2 cut(s)	869, 1221
MunI	CAATTG	2 cut(s)	1158, 2010
MvaI	CCWGG	2 cut(s)	869, 1221
MvnI	CGCG	2 cut(s)	386, 1779
NaeI	GCCGGC	1 cut(s)	1503
NgoMIV	GCCGGC	1 cut(s)	1501
NlaIII	CATG	7 cut(s)	362, 713, 799, 1255, 1336, 1478, 1760
NlaIV	GGNNCC	5 cut(s)	497, 599, 1109, 1735, 2007
NmeAIII	GCCGAG	1 cut(s)	1794
NmuCI	GTSAC	1 cut(s)	1028
NsiI	ATGCAT	2 cut(s)	6, 1184
NspI	RCATGY	3 cut(s)	713, 1336, 1760
NspV	TTCGAA	1 cut(s)	1520
PaeI	GCATGC	1 cut(s)	1336
PaeR7I	CTCGAG	1 cut(s)	1044
PagI	TCATGA	1 cut(s)	1251
PauI	GCGCGC	1 cut(s)	384
PciSI	GCTCTTC	3 cut(s)	542, 1398, 2070
PcsI	WCGNNNNNNNCGW	3 cut(s)	760, 1108, 1684
PdiI	GCCGGC	1 cut(s)	1503
PfeI	GAWTC	8 cut(s)	194, 334, 340, 854, 1283, 1297, 1680, 1994
PflMI	CCANNNNNTGG	1 cut(s)	1871
PkrI	GCNGC	7 cut(s)	176, 514, 1617, 1652, 1834, 1937, 2062
Ple19I	CGATCG	1 cut(s)	19
PleI	GAGTC	3 cut(s)	111, 568, 2038
PpsI	GAGTC	3 cut(s)	111, 568, 2038
PshBI	ATTAAT	2 cut(s)	312, 693
PsiI	TTATAA	1 cut(s)	366
Psp124BI	GAGCTC	1 cut(s)	67
Psp6I	CCWGG	2 cut(s)	867, 1219
PspGI	CCWGG	2 cut(s)	867, 1219
PspN4I	GGNNCC	5 cut(s)	497, 599, 1109, 1735, 2007
PspOMI	GGGCCC	1 cut(s)	495
PspPI	GGNCC	5 cut(s)	72, 495, 496, 1898, 2047
PspXI	VCTCGAGB	1 cut(s)	1044
PsrI	GAACNNNNNNTAC	2 cut(s)	136, 168
PstI	CTGCAG	2 cut(s)	125, 1620
PstNI	CAGNNNCTG	1 cut(s)	1615
PsuI	RGATCY	4 cut(s)	729, 1246, 1381, 2005
PteI	GCGCGC	1 cut(s)	384
PvuI	CGATCG	1 cut(s)	19
PvuII	CAGCTG	1 cut(s)	1445
RsaI	GTAC	6 cut(s)	283, 289, 599, 923, 1109, 1236
RsaNI	GTAC	6 cut(s)	282, 288, 598, 922, 1108, 1235
SacI	GAGCTC	1 cut(s)	67
SapI	GCTCTTC	3 cut(s)	542, 1398, 2070
SaqAI	TTAA	7 cut(s)	312, 380, 684, 693, 980, 1019, 1577
SatI	GCNGC	7 cut(s)	175, 513, 1616, 1651, 1833, 1936, 2061
Sau96I	GGNCC	5 cut(s)	72, 495, 496, 1898, 2047
SchI	GAGTC	3 cut(s)	111, 569, 2039
ScrFI	CCNGG	2 cut(s)	869, 1221
SduI	GDGCHC	3 cut(s)	67, 499, 1117
SexAI	ACCWGGT	1 cut(s)	867
SfaNI	GCATC	5 cut(s)	709, 1051, 1169, 1602, 1789
SfcI	CTRYAG	2 cut(s)	121, 1616
Sfr274I	CTCGAG	1 cut(s)	1044
SfuI	TTCGAA	1 cut(s)	1520
SinI	GGWCC	1 cut(s)	1898
SlaI	CTCGAG	1 cut(s)	1044
SmlI	CTYRAG	5 cut(s)	105, 733, 1044, 1526, 1703
SmoI	CTYRAG	5 cut(s)	105, 733, 1044, 1526, 1703
SpeI	ACTAGT	1 cut(s)	284
SphI	GCATGC	1 cut(s)	1336
Sse9I	AATT	9 cut(s)	566, 818, 1016, 1158, 1241, 1550, 1578, 1817, 2010
SsiI	CCGC	4 cut(s)	165, 650, 1336, 1833
SspMI	CTAG	5 cut(s)	285, 557, 1665, 1902, 1929
SstI	GAGCTC	1 cut(s)	67
StyD4I	CCNGG	2 cut(s)	867, 1219
StyI	CCWWGG	4 cut(s)	58, 201, 246, 1791
TaaI	ACNGT	3 cut(s)	257, 635, 1692
TaiI	ACGT	1 cut(s)	280
TaqI	TCGA	9 cut(s)	15, 19, 115, 456, 973, 1045, 1102, 1520, 1678
TasI	AATT	9 cut(s)	566, 818, 1016, 1158, 1241, 1550, 1578, 1817, 2010
TauI	GCSGC	1 cut(s)	1835
TfiI	GAWTC	8 cut(s)	194, 334, 340, 854, 1283, 1297, 1680, 1994
Tru1I	TTAA	7 cut(s)	312, 380, 684, 693, 980, 1019, 1577
Tru9I	TTAA	7 cut(s)	312, 380, 684, 693, 980, 1019, 1577
TscAI	CASTG	2 cut(s)	403, 670
TseFI	GTSAC	1 cut(s)	1028
TseI	GCWGC	6 cut(s)	174, 512, 1615, 1650, 1935, 2060
Tsp45I	GTSAC	1 cut(s)	1028
TspDTI	ATGAA	4 cut(s)	941, 959, 1320, 1463
TspGWI	ACGGA	1 cut(s)	590
TspRI	CASTG	2 cut(s)	403, 670
Van91I	CCANNNNNTGG	1 cut(s)	1871
VpaK11BI	GGWCC	1 cut(s)	1898
VspI	ATTAAT	2 cut(s)	312, 693
XagI	CCTNNNNNAGG	1 cut(s)	866
XapI	RAATTY	2 cut(s)	566, 818
XbaI	TCTAGA	1 cut(s)	556
XceI	RCATGY	3 cut(s)	713, 1336, 1760
XcmI	CCANNNNNNNNNTGG	1 cut(s)	932
XhoI	CTCGAG	1 cut(s)	1044
XspI	CTAG	5 cut(s)	285, 557, 1665, 1902, 1929
Zsp2I	ATGCAT	2 cut(s)	6, 1184

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.