auxin signaling f-box
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G12820 AT3G26810 |
| fragaria_vesca | FvH4_6g54140 |
| malus_domestica | MD09G1005000.v1.1 MD17G1009000.v1.1 |
| prunus_persica | Prupe.3G311800_v2.0.a1 |
| pyrus_communis | pycom111g00370 |
| rosa_chinensis | RchiOBHm_Chr2g0176311 |
| rosa_laevigata | RLG00000022402 |
| rosa_multiflora | Rmu_sc0000405.1_g000027 |
| rosa_roxburghii | Rroxscaffold_2G00076580 |
| rosa_rugosa | Rorug02G0593100 |
| rosa_samantha | Rh2CG645600 Rh2DG696400 |
| rosa_wichuraiana | Rw2G055070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 1349 |
| AciI | CCGC | 5 cut(s) | 224, 441, 689, 940, 1706 |
| AclWI | GGATC | 2 cut(s) | 471, 1506 |
| AcsI | RAATTY | 1 cut(s) | 1177 |
| AcuI | CTGAAG | 2 cut(s) | 653, 920 |
| AdeI | CACNNNGTG | 1 cut(s) | 1547 |
| AfaI | GTAC | 4 cut(s) | 98, 651, 1346, 1673 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 786, 1681 |
| AflIII | ACRYGT | 1 cut(s) | 995 |
| AgsI | TTSAA | 9 cut(s) | 107, 205, 232, 308, 322, 751, 868, 980, 1417 |
| AjiI | CACGTC | 1 cut(s) | 1228 |
| AleI | CACNNNNGTG | 1 cut(s) | 1058 |
| Alw26I | GTCTC | 3 cut(s) | 618, 830, 1313 |
| AlwI | GGATC | 2 cut(s) | 471, 1506 |
| Ama87I | CYCGRG | 2 cut(s) | 1205, 1358 |
| ApeKI | GCWGC | 5 cut(s) | 355, 812, 881, 1095, 1145 |
| ApoI | RAATTY | 1 cut(s) | 1177 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1238, 1270 |
| AseI | ATTAAT | 1 cut(s) | 153 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 8, 1294 |
| AspLEI | GCGC | 4 cut(s) | 688, 1477, 1576, 1705 |
| AspS9I | GGNCC | 1 cut(s) | 391 |
| AsuHPI | GGTGA | 2 cut(s) | 850, 977 |
| AvaI | CYCGRG | 2 cut(s) | 1205, 1358 |
| AvaII | GGWCC | 1 cut(s) | 391 |
| BauI | CACGAG | 1 cut(s) | 1637 |
| BbsI | GAAGAC | 2 cut(s) | 1318, 1518 |
| BbvI | GCAGC | 5 cut(s) | 342, 799, 893, 1082, 1157 |
| BccI | CCATC | 5 cut(s) | 322, 416, 1036, 1091, 1615 |
| BceAI | ACGGC | 2 cut(s) | 279, 1488 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1543, 1577 |
| BclI | TGATCA | 1 cut(s) | 493 |
| BcoDI | GTCTC | 3 cut(s) | 618, 830, 1313 |
| BfaI | CTAG | 7 cut(s) | 288, 593, 609, 806, 1076, 1244, 1442 |
| BfoI | RGCGCY | 2 cut(s) | 1478, 1577 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1088 |
| BisI | GCNGC | 8 cut(s) | 356, 441, 689, 813, 882, 1096, 1146, 1706 |
| BlsI | GCNGC | 8 cut(s) | 357, 442, 690, 814, 883, 1097, 1147, 1707 |
| Bme18I | GGWCC | 1 cut(s) | 391 |
| BmeT110I | CYCGRG | 2 cut(s) | 1205, 1358 |
| BmgBI | CACGTC | 1 cut(s) | 1228 |
| BmgT120I | GGNCC | 1 cut(s) | 391 |
| BmiI | GGNNCC | 1 cut(s) | 240 |
| BmsI | GCATC | 6 cut(s) | 463, 649, 1209, 1353, 1541, 1690 |
| BoxI | GACNNNNGTC | 1 cut(s) | 542 |
| BpiI | GAAGAC | 2 cut(s) | 1318, 1518 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1352, 1384 |
| Bpu10I | CCTNAGC | 3 cut(s) | 314, 1016, 1101 |
| BpuEI | CTTGAG | 1 cut(s) | 371 |
| Bsa29I | ATCGAT | 1 cut(s) | 489 |
| BsaI | GGTCTC | 2 cut(s) | 618, 1313 |
| BsaJI | CCNNGG | 2 cut(s) | 269, 1577 |
| BsaWI | WCCGGW | 2 cut(s) | 1617, 1674 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 246, 276, 845, 875, 1251, 1281 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 786, 1681 |
| Bse3DI | GCAATG | 1 cut(s) | 922 |
| BseCI | ATCGAT | 1 cut(s) | 489 |
| BseDI | CCNNGG | 2 cut(s) | 269, 1577 |
| BseGI | GGATG | 7 cut(s) | 333, 1182, 1200, 1527, 1556, 1626, 1705 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 786, 1681 |
| BseMI | GCAATG | 1 cut(s) | 922 |
| BseMII | CTCAG | 5 cut(s) | 843, 876, 1277, 1317, 1558 |
| BseRI | GAGGAG | 2 cut(s) | 802, 807 |
| BseXI | GCAGC | 5 cut(s) | 342, 799, 893, 1082, 1157 |
| BsgI | GTGCAG | 1 cut(s) | 666 |
| Bsh1236I | CGCG | 1 cut(s) | 1349 |
| BshVI | ATCGAT | 1 cut(s) | 489 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1205, 1358 |
| BsiSI | CCGG | 2 cut(s) | 1618, 1675 |
| BslFI | GGGAC | 2 cut(s) | 1481, 1702 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 786, 1681 |
| BsmAI | GTCTC | 3 cut(s) | 618, 830, 1313 |
| BsmFI | GGGAC | 2 cut(s) | 1481, 1702 |
| BsmI | GAATGC | 1 cut(s) | 73 |
| Bso31I | GGTCTC | 2 cut(s) | 618, 1313 |
| BsoBI | CYCGRG | 2 cut(s) | 1205, 1358 |
| Bsp143I | GATC | 5 cut(s) | 463, 493, 1222, 1511, 1593 |
| Bsp19I | CCATGG | 1 cut(s) | 1577 |
| BspACI | CCGC | 5 cut(s) | 224, 441, 689, 940, 1706 |
| BspCNI | CTCAG | 5 cut(s) | 842, 877, 1278, 1316, 1557 |
| BspDI | ATCGAT | 1 cut(s) | 489 |
| BspFNI | CGCG | 1 cut(s) | 1349 |
| BspHI | TCATGA | 1 cut(s) | 244 |
| BspLI | GGNNCC | 1 cut(s) | 240 |
| BspPI | GGATC | 2 cut(s) | 471, 1506 |
| BspQI | GCTCTTC | 1 cut(s) | 303 |
| BspTNI | GGTCTC | 2 cut(s) | 618, 1313 |
| BsrDI | GCAATG | 1 cut(s) | 922 |
| BssECI | CCNNGG | 2 cut(s) | 269, 1577 |
| BssMI | GATC | 5 cut(s) | 463, 493, 1222, 1511, 1593 |
| BssSI | CACGAG | 1 cut(s) | 1637 |
| BssT1I | CCWWGG | 2 cut(s) | 269, 1577 |
| Bst2BI | CACGAG | 1 cut(s) | 1637 |
| Bst4CI | ACNGT | 7 cut(s) | 116, 143, 654, 824, 1159, 1172, 1681 |
| Bst6I | CTCTTC | 2 cut(s) | 303, 317 |
| BstC8I | GCNNGC | 6 cut(s) | 452, 562, 1093, 1276, 1403, 1563 |
| BstDSI | CCRYGG | 1 cut(s) | 1577 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 784 |
| BstF5I | GGATG | 7 cut(s) | 333, 1182, 1200, 1527, 1556, 1626, 1705 |
| BstFNI | CGCG | 1 cut(s) | 1349 |
| BstH2I | RGCGCY | 2 cut(s) | 1478, 1577 |
| BstHHI | GCGC | 4 cut(s) | 688, 1477, 1576, 1705 |
| BstKTI | GATC | 5 cut(s) | 466, 496, 1225, 1514, 1596 |
| BstMAI | GTCTC | 3 cut(s) | 618, 830, 1313 |
| BstMBI | GATC | 5 cut(s) | 463, 493, 1222, 1511, 1593 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 437, 919, 1088, 1363, 1481, 1571 |
| BstNSI | RCATGY | 3 cut(s) | 35, 999, 1405 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 542 |
| BstUI | CGCG | 1 cut(s) | 1349 |
| BstV1I | GCAGC | 5 cut(s) | 342, 799, 893, 1082, 1157 |
| BstV2I | GAAGAC | 2 cut(s) | 1318, 1518 |
| BstX2I | RGATCY | 1 cut(s) | 463 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1716 |
| BstYI | RGATCY | 1 cut(s) | 463 |
| Bsu15I | ATCGAT | 1 cut(s) | 489 |
| BsuTUI | ATCGAT | 1 cut(s) | 489 |
| BtgI | CCRYGG | 1 cut(s) | 1577 |
| BtrI | CACGTC | 1 cut(s) | 1228 |
| BtsCI | GGATG | 7 cut(s) | 333, 1182, 1200, 1527, 1556, 1626, 1705 |
| BtsIMutI | CAGTG | 3 cut(s) | 417, 820, 1552 |
| Cac8I | GCNNGC | 6 cut(s) | 452, 562, 1093, 1276, 1403, 1563 |
| CciI | TCATGA | 1 cut(s) | 244 |
| CfoI | GCGC | 4 cut(s) | 688, 1477, 1576, 1705 |
| Cfr13I | GGNCC | 1 cut(s) | 391 |
| ClaI | ATCGAT | 1 cut(s) | 489 |
| Csp6I | GTAC | 4 cut(s) | 97, 650, 1345, 1672 |
| CviQI | GTAC | 4 cut(s) | 97, 650, 1345, 1672 |
| DpnI | GATC | 5 cut(s) | 465, 495, 1224, 1513, 1595 |
| DpnII | GATC | 5 cut(s) | 463, 493, 1222, 1511, 1593 |
| DraIII | CACNNNGTG | 1 cut(s) | 1547 |
| Eam1104I | CTCTTC | 2 cut(s) | 303, 317 |
| EarI | CTCTTC | 2 cut(s) | 303, 317 |
| Eco130I | CCWWGG | 2 cut(s) | 269, 1577 |
| Eco31I | GGTCTC | 2 cut(s) | 618, 1313 |
| Eco47I | GGWCC | 1 cut(s) | 391 |
| Eco57I | CTGAAG | 2 cut(s) | 653, 920 |
| Eco88I | CYCGRG | 2 cut(s) | 1205, 1358 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 784 |
| EcoT14I | CCWWGG | 2 cut(s) | 269, 1577 |
| ErhI | CCWWGG | 2 cut(s) | 269, 1577 |
| FaqI | GGGAC | 2 cut(s) | 1481, 1702 |
| FbaI | TGATCA | 1 cut(s) | 493 |
| Fnu4HI | GCNGC | 8 cut(s) | 356, 441, 689, 813, 882, 1096, 1146, 1706 |
| FokI | GGATG | 7 cut(s) | 340, 1169, 1187, 1534, 1563, 1633, 1712 |
| Fsp4HI | GCNGC | 8 cut(s) | 356, 441, 689, 813, 882, 1096, 1146, 1706 |
| FspBI | CTAG | 7 cut(s) | 288, 593, 609, 806, 1076, 1244, 1442 |
| GlaI | GCGC | 4 cut(s) | 687, 1476, 1575, 1704 |
| GluI | GCNGC | 8 cut(s) | 356, 441, 689, 813, 882, 1096, 1146, 1706 |
| HaeII | RGCGCY | 2 cut(s) | 1478, 1577 |
| HapII | CCGG | 2 cut(s) | 1618, 1675 |
| HhaI | GCGC | 4 cut(s) | 688, 1477, 1576, 1705 |
| Hin6I | GCGC | 4 cut(s) | 686, 1475, 1574, 1703 |
| HinP1I | GCGC | 4 cut(s) | 686, 1475, 1574, 1703 |
| HincII | GTYRAC | 1 cut(s) | 700 |
| HindII | GTYRAC | 1 cut(s) | 700 |
| HindIII | AAGCTT | 1 cut(s) | 911 |
| HpaII | CCGG | 2 cut(s) | 1618, 1675 |
| HphI | GGTGA | 2 cut(s) | 850, 977 |
| Hpy166II | GTNNAC | 1 cut(s) | 700 |
| Hpy188I | TCNGA | 6 cut(s) | 174, 633, 739, 1033, 1193, 1340 |
| Hpy188III | TCNNGA | 9 cut(s) | 158, 245, 350, 461, 467, 593, 806, 1244, 1360 |
| Hpy8I | GTNNAC | 1 cut(s) | 700 |
| HpyAV | CCTTC | 5 cut(s) | 401, 563, 1064, 1244, 1284 |
| HpyCH4III | ACNGT | 7 cut(s) | 116, 143, 654, 824, 1159, 1172, 1681 |
| HpyCH4IV | ACGT | 1 cut(s) | 1227 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 437, 919, 1088, 1363, 1481, 1571 |
| HpySE526I | ACGT | 1 cut(s) | 1227 |
| HspAI | GCGC | 4 cut(s) | 686, 1475, 1574, 1703 |
| Ksp22I | TGATCA | 1 cut(s) | 493 |
| Kzo9I | GATC | 5 cut(s) | 463, 493, 1222, 1511, 1593 |
| LguI | GCTCTTC | 1 cut(s) | 303 |
| LmnI | GCTCC | 3 cut(s) | 820, 1110, 1259 |
| Lsp1109I | GCAGC | 5 cut(s) | 342, 799, 893, 1082, 1157 |
| LweI | GCATC | 6 cut(s) | 463, 649, 1209, 1353, 1541, 1690 |
| MaeI | CTAG | 7 cut(s) | 288, 593, 609, 806, 1076, 1244, 1442 |
| MaeII | ACGT | 1 cut(s) | 1227 |
| MalI | GATC | 5 cut(s) | 465, 495, 1224, 1513, 1595 |
| MboI | GATC | 5 cut(s) | 463, 493, 1222, 1511, 1593 |
| MboII | GAAGA | 8 cut(s) | 320, 334, 449, 1079, 1318, 1447, 1518, 1637 |
| MflI | RGATCY | 1 cut(s) | 463 |
| MluCI | AATT | 5 cut(s) | 4, 232, 376, 445, 1177 |
| MlyI | GAGTC | 5 cut(s) | 355, 532, 637, 749, 1188 |
| MmeI | TCCRAC | 1 cut(s) | 1216 |
| MroXI | GAANNNNTTC | 2 cut(s) | 8, 1294 |
| MseI | TTAA | 5 cut(s) | 153, 381, 512, 674, 909 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1058, 1340, 1714 |
| MspA1I | CMGCKG | 3 cut(s) | 884, 940, 1058 |
| MspI | CCGG | 2 cut(s) | 1618, 1675 |
| Mva1269I | GAATGC | 1 cut(s) | 73 |
| MvnI | CGCG | 1 cut(s) | 1349 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 437, 919, 1088, 1363, 1481, 1571 |
| NcoI | CCATGG | 1 cut(s) | 1577 |
| NdeII | GATC | 5 cut(s) | 463, 493, 1222, 1511, 1593 |
| NlaIV | GGNNCC | 1 cut(s) | 240 |
| NmeAIII | GCCGAG | 1 cut(s) | 1067 |
| NmuCI | GTSAC | 5 cut(s) | 544, 965, 1060, 1228, 1537 |
| NspI | RCATGY | 3 cut(s) | 35, 999, 1405 |
| OliI | CACNNNNGTG | 1 cut(s) | 1058 |
| PaeI | GCATGC | 1 cut(s) | 1405 |
| PaeR7I | CTCGAG | 2 cut(s) | 1205, 1358 |
| PagI | TCATGA | 1 cut(s) | 244 |
| PciI | ACATGT | 1 cut(s) | 995 |
| PciSI | GCTCTTC | 1 cut(s) | 303 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1149 |
| PctI | GAATGC | 1 cut(s) | 73 |
| PdmI | GAANNNNTTC | 2 cut(s) | 8, 1294 |
| PfeI | GAWTC | 6 cut(s) | 177, 734, 868, 889, 1351, 1720 |
| PflFI | GACNNNGTC | 1 cut(s) | 1322 |
| PkrI | GCNGC | 8 cut(s) | 357, 442, 690, 814, 883, 1097, 1147, 1707 |
| PleI | GAGTC | 5 cut(s) | 354, 532, 636, 748, 1188 |
| PpsI | GAGTC | 5 cut(s) | 354, 532, 636, 748, 1188 |
| PscI | ACATGT | 1 cut(s) | 995 |
| PshAI | GACNNNNGTC | 1 cut(s) | 542 |
| PshBI | ATTAAT | 1 cut(s) | 153 |
| PspN4I | GGNNCC | 1 cut(s) | 240 |
| PspPI | GGNCC | 1 cut(s) | 391 |
| PspXI | VCTCGAGB | 1 cut(s) | 1205 |
| PsuI | RGATCY | 1 cut(s) | 463 |
| PsyI | GACNNNGTC | 1 cut(s) | 1322 |
| PvuII | CAGCTG | 2 cut(s) | 884, 1058 |
| RsaI | GTAC | 4 cut(s) | 98, 651, 1346, 1673 |
| RsaNI | GTAC | 4 cut(s) | 97, 650, 1345, 1672 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1058, 1340, 1714 |
| SapI | GCTCTTC | 1 cut(s) | 303 |
| SaqAI | TTAA | 5 cut(s) | 153, 381, 512, 674, 909 |
| SatI | GCNGC | 8 cut(s) | 356, 441, 689, 813, 882, 1096, 1146, 1706 |
| Sau3AI | GATC | 5 cut(s) | 463, 493, 1222, 1511, 1593 |
| Sau96I | GGNCC | 1 cut(s) | 391 |
| SchI | GAGTC | 5 cut(s) | 355, 532, 637, 749, 1188 |
| SfaNI | GCATC | 6 cut(s) | 463, 649, 1209, 1353, 1541, 1690 |
| Sfr274I | CTCGAG | 2 cut(s) | 1205, 1358 |
| SinI | GGWCC | 1 cut(s) | 391 |
| SlaI | CTCGAG | 2 cut(s) | 1205, 1358 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1058, 1340, 1714 |
| SmlI | CTYRAG | 3 cut(s) | 350, 1205, 1358 |
| SmoI | CTYRAG | 3 cut(s) | 350, 1205, 1358 |
| SphI | GCATGC | 1 cut(s) | 1405 |
| Sse9I | AATT | 5 cut(s) | 4, 232, 376, 445, 1177 |
| SsiI | CCGC | 5 cut(s) | 224, 441, 689, 940, 1706 |
| SspMI | CTAG | 7 cut(s) | 288, 593, 609, 806, 1076, 1244, 1442 |
| StyI | CCWWGG | 2 cut(s) | 269, 1577 |
| TaaI | ACNGT | 7 cut(s) | 116, 143, 654, 824, 1159, 1172, 1681 |
| TaiI | ACGT | 1 cut(s) | 1230 |
| TaqI | TCGA | 5 cut(s) | 39, 489, 567, 1206, 1359 |
| TaqII | GACCGA | 1 cut(s) | 1079 |
| TasI | AATT | 5 cut(s) | 4, 232, 376, 445, 1177 |
| TauI | GCSGC | 3 cut(s) | 443, 691, 1708 |
| TfiI | GAWTC | 6 cut(s) | 177, 734, 868, 889, 1351, 1720 |
| Tru1I | TTAA | 5 cut(s) | 153, 381, 512, 674, 909 |
| Tru9I | TTAA | 5 cut(s) | 153, 381, 512, 674, 909 |
| TscAI | CASTG | 3 cut(s) | 424, 827, 1552 |
| TseFI | GTSAC | 5 cut(s) | 544, 965, 1060, 1228, 1537 |
| TseI | GCWGC | 5 cut(s) | 355, 812, 881, 1095, 1145 |
| Tsp45I | GTSAC | 5 cut(s) | 544, 965, 1060, 1228, 1537 |
| TspGWI | ACGGA | 3 cut(s) | 1175, 1449, 1647 |
| TspRI | CASTG | 3 cut(s) | 424, 827, 1552 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1322 |
| VpaK11BI | GGWCC | 1 cut(s) | 391 |
| VspI | ATTAAT | 1 cut(s) | 153 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 784 |
| XapI | RAATTY | 1 cut(s) | 1177 |
| XbaI | TCTAGA | 3 cut(s) | 592, 805, 1243 |
| XceI | RCATGY | 3 cut(s) | 35, 999, 1405 |
| XhoI | CTCGAG | 2 cut(s) | 1205, 1358 |
| XmnI | GAANNNNTTC | 2 cut(s) | 8, 1294 |
| XspI | CTAG | 7 cut(s) | 288, 593, 609, 806, 1076, 1244, 1442 |