AT3G42950

Polygalacturonase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0013113
Physical Location & Seq
Forward (+)
15015086 .. 15018653
3568 bp
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UTR
Exon/CDS
Intron
AT3G42950.1

Sequence Viewer

Length: 1455 bp
ATGGTGAGACGTTTCCTCTCTTCTCACAAATCTCTCATCACTGTTTTCTGGATCGCCACTTTCGCTTCCTTATTCATCTGGCAATTCGGCGGCGTTTCCACAAATCTCTACTCCGGTTTCTCCCTTTTCTGGTCGTCGTCTTCAACAACCACCACCGTCTTCTCCGGTGGATTCCCCAAGCTCAGACCTGTAGTTTTCAATCTAACAGACTTCGGTGCTGTCGGCGATGGTGTCACAATCAACACTGAAGCTTTCGAGAAAGCTATTTATAAGATCTCTAAGCTTGCTAAGAAAGGAGGTGGTCAACTTAATGTTCCTCCTGGTCGTTGGCTCACTGCTCCGTTTAATCTCACTAGTTATATGACTCTTTTCCTCTCTGAGAACGCTGAGATTCTTGCTCTTCAGGATGAAAAGTATTGGTCTTTGCTTCCTCCTTTACCTTCATATGGATATGGAAGAGAGCATCATGGACCTCGTTATGGAAGTTTCATTCATGGACAGAATCTTAGAGATGTTGTTGTTACAGGGAATAATGGTAGCATCAACGGGCAGGGACAAACGTGGTGGAAGAAGTATCGCCAAAAGCTGCTTAACCACACGAGAGGACCACTGGTGCAGATAATGTGGTCAAGTGACATTGTTTTTGCCAATATCACTTTGCGTGATTCTCCATTTTGGACGCTTCACCCATATGACTGCAAAAATGTCACAATCACCAATATGACCATTTTGGCGCCTGTGTTCGAAGCCCCAAACACTGATGGTATCGATCCGGATTCGTGTGAGGACATGTTAATCGAGAACTCTTACATCAGCGTTGGGGATGATGGAATCGCAATAAAGAGCGGTTGGGACCAGTATGGAACTACATATGGAAAACCTTCAAAGAACATACTCATCCGCAACCTCATCATCCGCTCCATGGTTAGCGCTGGTATATCAATAGGAAGTGAGATGTCTGGTGGTGTCTCGAATATCACAGTCGAGAATATTCTGATTTGGAGCTCCCGGCGTGGAGTTAGGATTAAAACCGCACCAGGACGAGGTGGGTATGTCCGGGATATAACATTCCGGAATGTCACATTGGATGAGTTGAGAGTTGGTATTGTCATTAAAACAGACTACAACGAGCACCCAGATGGTGGATTCAATCCCCAAGCCTTTCCGATACTCGAGAACATAAACTACACTGGGATATACGGTCAGGGAGTGCGTGTACCAGTGCGTATCCAAGGAAGCAAAGAGATTCCTGTTAAAAATGTAACCTTCAGGGACATGTCAGTGGGGATAACATACAAGAAAAAGCACATATTCCAGTGTGCGTACGTGGAGGGGCGTGTGATAGGCACCATCTTCCCAGCTCCGTGTGATAACCTTGATCGGTATGATGAGCAGGAACGGTTGGTGAAGCAATCTGATTCCCAGAATGCAACAGATATAGACTACGAGATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyco_hydro_28 Pectate_lyase_3

Protein Analysis

484

Amino Acids

54.07

Weight (kDa)

8.64

Isoelectric Point (pI)

41.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_28 PF00295 157 - 444 1.4e-47 Glycosyl hydrolases family 28
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013113)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G19170 AT3G42950
fragaria_vesca FvH4_1g09050 FvH4_1g09050
malus_domestica MD02G1096000.v1.1
prunus_persica Prupe.7G195000_v2.0.a1
pyrus_communis pycom02g07580 pycom15g19530
rosa_chinensis RchiOBHm_Chr2g0095471
rosa_laevigata RLG00000016570
rosa_multiflora Rmu_sc0006076.1_g000011
rosa_roxburghii Rroxscaffold_2G00146310
rosa_rugosa Rorug02G0051400.1
rosa_samantha Rh2AG099400 Rh2BG100700 Rh2CG102800 Rh2DG100300
rosa_wichuraiana Rw2G007530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 270
AccB1I GGYRCC 2 cut(s) 733, 1346
AccB7I CCANNNNNTGG 1 cut(s) 1142
AccBSI CCGCTC 2 cut(s) 846, 918
AccIII TCCGGA 2 cut(s) 772, 1071
AciI CCGC 5 cut(s) 90, 846, 901, 916, 1032
AclWI GGATC 2 cut(s) 59, 764
AcuI CTGAAG 3 cut(s) 267, 386, 1252
AcyI GRCGYC 1 cut(s) 734
AfaI GTAC 2 cut(s) 1218, 1325
AfeI AGCGCT 1 cut(s) 931
AfiI CCNNNNNNNGG 6 cut(s) 129, 446, 479, 922, 1043, 1142
AflIII ACRYGT 2 cut(s) 789, 1275
AgsI TTSAA 4 cut(s) 144, 199, 885, 1150
AhlI ACTAGT 1 cut(s) 353
AjnI CCWGG 2 cut(s) 319, 1036
AjuI GAANNNNNNNTTGG 2 cut(s) 1067, 1099
AluBI AGCT 7 cut(s) 181, 251, 263, 283, 586, 1005, 1361
AluI AGCT 7 cut(s) 181, 251, 263, 283, 586, 1005, 1361
Alw21I GWGCWC 2 cut(s) 1007, 1134
Alw26I GTCTC 1 cut(s) 973
AlwI GGATC 2 cut(s) 59, 764
Ama87I CYCGRG 1 cut(s) 1172
Aor13HI TCCGGA 2 cut(s) 772, 1071
Aor51HI AGCGCT 1 cut(s) 931
ApeKI GCWGC 1 cut(s) 586
ArsI GACNNNNNNTTYG 2 cut(s) 626, 658
Asp700I GAANNNNTTC 1 cut(s) 880
AspLEI GCGC 2 cut(s) 736, 932
AspS9I GGNCC 3 cut(s) 470, 605, 853
AsuC2I CCSGG 2 cut(s) 1009, 1058
AsuHPI GGTGA 4 cut(s) 16, 677, 706, 1417
AsuII TTCGAA 1 cut(s) 744
AvaI CYCGRG 1 cut(s) 1172
AvaII GGWCC 3 cut(s) 470, 605, 853
BanI GGYRCC 2 cut(s) 733, 1346
BanII GRGCYC 1 cut(s) 1007
BauI CACGAG 1 cut(s) 598
BbsI GAAGAC 2 cut(s) 132, 151
Bbv12I GWGCWC 2 cut(s) 1007, 1134
BbvI GCAGC 1 cut(s) 573
BccI CCATC 5 cut(s) 221, 755, 821, 1133, 1358
BciT130I CCWGG 2 cut(s) 321, 1038
BciVI GTATCC 1 cut(s) 1238
BcnI CCSGG 2 cut(s) 1009, 1058
BcoDI GTCTC 1 cut(s) 973
BcuI ACTAGT 1 cut(s) 353
BfaI CTAG 1 cut(s) 354
BfmI CTRYAG 1 cut(s) 189
BfoI RGCGCY 2 cut(s) 737, 933
BfuI GTATCC 1 cut(s) 1238
BglII AGATCT 2 cut(s) 273, 1449
BisI GCNGC 2 cut(s) 91, 587
BlsI GCNGC 2 cut(s) 92, 588
Bme1390I CCNGG 4 cut(s) 321, 1009, 1038, 1058
Bme18I GGWCC 3 cut(s) 470, 605, 853
BmeT110I CYCGRG 1 cut(s) 1172
BmgT120I GGNCC 3 cut(s) 470, 605, 853
BmiI GGNNCC 3 cut(s) 735, 854, 1348
BmrFI CCNGG 4 cut(s) 321, 1009, 1038, 1058
BmrI ACTGGG 1 cut(s) 1200
BmsI GCATC 2 cut(s) 472, 549
BmuI ACTGGG 1 cut(s) 1200
BpiI GAAGAC 2 cut(s) 132, 151
Bpu14I TTCGAA 1 cut(s) 744
BpuMI CCSGG 2 cut(s) 1009, 1058
Bsa29I ATCGAT 1 cut(s) 768
BsaAI YACGTR 1 cut(s) 1327
BsaHI GRCGYC 1 cut(s) 734
BsaJI CCNNGG 2 cut(s) 921, 1231
BsaWI WCCGGW 4 cut(s) 113, 164, 772, 1071
BsaXI ACNNNNNCTCC 2 cut(s) 1200, 1230
Bsc4I CCNNNNNNNGG 6 cut(s) 129, 446, 479, 922, 1043, 1142
Bse1I ACTGG 5 cut(s) 615, 856, 1195, 1220, 1315
BseAI TCCGGA 2 cut(s) 772, 1071
BseBI CCWGG 2 cut(s) 321, 1038
BseCI ATCGAT 1 cut(s) 768
BseDI CCNNGG 2 cut(s) 921, 1231
BseGI GGATG 5 cut(s) 412, 829, 897, 912, 1093
BseLI CCNNNNNNNGG 6 cut(s) 129, 446, 479, 922, 1043, 1142
BseMII CTCAG 3 cut(s) 196, 369, 378
BseNI ACTGG 5 cut(s) 615, 856, 1195, 1220, 1315
BseXI GCAGC 1 cut(s) 573
BseYI CCCAGC 1 cut(s) 1357
BsgI GTGCAG 1 cut(s) 635
BshNI GGYRCC 2 cut(s) 733, 1346
BshVI ATCGAT 1 cut(s) 768
BsiHKAI GWGCWC 2 cut(s) 1007, 1134
BsiHKCI CYCGRG 1 cut(s) 1172
BsiSI CCGG 6 cut(s) 114, 165, 773, 1009, 1057, 1072
BsiWI CGTACG 1 cut(s) 1323
BslFI GGGAC 3 cut(s) 567, 866, 1286
BslI CCNNNNNNNGG 6 cut(s) 129, 446, 479, 922, 1043, 1142
BsmAI GTCTC 1 cut(s) 973
BsmFI GGGAC 3 cut(s) 567, 866, 1286
BsmI GAATGC 1 cut(s) 1432
BsoBI CYCGRG 1 cut(s) 1172
Bsp119I TTCGAA 1 cut(s) 744
Bsp1286I GDGCHC 2 cut(s) 1007, 1134
Bsp13I TCCGGA 2 cut(s) 772, 1071
Bsp143I GATC 5 cut(s) 51, 273, 769, 1378, 1449
Bsp19I CCATGG 1 cut(s) 921
BspACI CCGC 5 cut(s) 90, 846, 901, 916, 1032
BspCNI CTCAG 3 cut(s) 195, 370, 379
BspDI ATCGAT 1 cut(s) 768
BspEI TCCGGA 2 cut(s) 772, 1071
BspLI GGNNCC 3 cut(s) 735, 854, 1348
BspPI GGATC 2 cut(s) 59, 764
BspQI GCTCTTC 1 cut(s) 405
BspT104I TTCGAA 1 cut(s) 744
BspT107I GGYRCC 2 cut(s) 733, 1346
BsrBI CCGCTC 2 cut(s) 846, 918
BsrI ACTGG 5 cut(s) 615, 856, 1195, 1220, 1315
BssECI CCNNGG 2 cut(s) 921, 1231
BssMI GATC 5 cut(s) 51, 273, 769, 1378, 1449
BssNI GRCGYC 1 cut(s) 734
BssSI CACGAG 1 cut(s) 598
BssT1I CCWWGG 2 cut(s) 921, 1231
Bst2BI CACGAG 1 cut(s) 598
Bst2UI CCWGG 2 cut(s) 321, 1038
Bst4CI ACNGT 5 cut(s) 43, 157, 982, 1202, 1401
Bst6I CTCTTC 3 cut(s) 25, 405, 451
BstACI GRCGYC 1 cut(s) 734
BstBAI YACGTR 1 cut(s) 1327
BstBI TTCGAA 1 cut(s) 744
BstC8I GCNNGC 1 cut(s) 285
BstDEI CTNAG 6 cut(s) 182, 279, 288, 378, 387, 506
BstDSI CCRYGG 1 cut(s) 921
BstF5I GGATG 5 cut(s) 412, 829, 897, 912, 1093
BstH2I RGCGCY 2 cut(s) 737, 933
BstHHI GCGC 2 cut(s) 736, 932
BstKTI GATC 5 cut(s) 54, 276, 772, 1381, 1452
BstMAI GTCTC 1 cut(s) 973
BstMBI GATC 5 cut(s) 51, 273, 769, 1378, 1449
BstMWI GCNNNNNNNGC 1 cut(s) 62
BstNI CCWGG 2 cut(s) 321, 1038
BstNSI RCATGY 2 cut(s) 793, 1279
BstSCI CCNGG 4 cut(s) 319, 1007, 1036, 1056
BstSFI CTRYAG 1 cut(s) 189
BstV1I GCAGC 1 cut(s) 573
BstV2I GAAGAC 2 cut(s) 132, 151
BstX2I RGATCY 2 cut(s) 273, 1449
BstYI RGATCY 2 cut(s) 273, 1449
Bsu15I ATCGAT 1 cut(s) 768
BsuI GTATCC 1 cut(s) 1238
BsuTUI ATCGAT 1 cut(s) 768
BtgI CCRYGG 1 cut(s) 921
BtgZI GCGATG 1 cut(s) 240
BtsCI GGATG 5 cut(s) 412, 829, 897, 912, 1093
BtsI GCAGTG 1 cut(s) 333
BtsIMutI CAGTG 9 cut(s) 39, 243, 333, 608, 756, 1188, 1227, 1287, 1322
Cac8I GCNNGC 1 cut(s) 285
CfoI GCGC 2 cut(s) 736, 932
Cfr13I GGNCC 3 cut(s) 470, 605, 853
ClaI ATCGAT 1 cut(s) 768
CseI GACGC 1 cut(s) 688
Csp6I GTAC 2 cut(s) 1217, 1324
CspCI CAANNNNNGTGG 2 cut(s) 545, 580
CviAII CATG 5 cut(s) 467, 494, 790, 922, 1276
CviQI GTAC 2 cut(s) 1217, 1324
DdeI CTNAG 6 cut(s) 182, 279, 288, 378, 387, 506
DinI GGCGCC 1 cut(s) 735
DpnI GATC 5 cut(s) 53, 275, 771, 1380, 1451
DpnII GATC 5 cut(s) 51, 273, 769, 1378, 1449
Eam1104I CTCTTC 3 cut(s) 25, 405, 451
EarI CTCTTC 3 cut(s) 25, 405, 451
Ecl136II GAGCTC 1 cut(s) 1005
Eco130I CCWWGG 2 cut(s) 921, 1231
Eco24I GRGCYC 1 cut(s) 1007
Eco47I GGWCC 3 cut(s) 470, 605, 853
Eco47III AGCGCT 1 cut(s) 931
Eco53kI GAGCTC 1 cut(s) 1005
Eco57I CTGAAG 3 cut(s) 267, 386, 1252
Eco88I CYCGRG 1 cut(s) 1172
EcoICRI GAGCTC 1 cut(s) 1005
EcoRII CCWGG 2 cut(s) 319, 1036
EcoT14I CCWWGG 2 cut(s) 921, 1231
EcoT38I GRGCYC 1 cut(s) 1007
EgeI GGCGCC 1 cut(s) 735
EheI GGCGCC 1 cut(s) 735
ErhI CCWWGG 2 cut(s) 921, 1231
FaeI CATG 5 cut(s) 470, 497, 793, 925, 1279
FaqI GGGAC 3 cut(s) 567, 866, 1286
FatI CATG 5 cut(s) 466, 493, 789, 921, 1275
FauNDI CATATG 3 cut(s) 445, 691, 871
Fnu4HI GCNGC 2 cut(s) 91, 587
FokI GGATG 5 cut(s) 419, 836, 884, 899, 1100
FriOI GRGCYC 1 cut(s) 1007
Fsp4HI GCNGC 2 cut(s) 91, 587
FspBI CTAG 1 cut(s) 354
GlaI GCGC 2 cut(s) 735, 931
GluI GCNGC 2 cut(s) 91, 587
GsaI CCCAGC 1 cut(s) 1361
HaeII RGCGCY 2 cut(s) 737, 933
HapII CCGG 6 cut(s) 114, 165, 773, 1009, 1057, 1072
HgaI GACGC 1 cut(s) 688
HhaI GCGC 2 cut(s) 736, 932
Hin1I GRCGYC 1 cut(s) 734
Hin1II CATG 5 cut(s) 470, 497, 793, 925, 1279
Hin6I GCGC 2 cut(s) 734, 930
HinP1I GCGC 2 cut(s) 734, 930
HincII GTYRAC 1 cut(s) 305
HindII GTYRAC 1 cut(s) 305
HindIII AAGCTT 2 cut(s) 249, 281
HpaII CCGG 6 cut(s) 114, 165, 773, 1009, 1057, 1072
HphI GGTGA 4 cut(s) 16, 677, 706, 1417
Hpy166II GTNNAC 2 cut(s) 305, 1217
Hpy188I TCNGA 6 cut(s) 185, 379, 996, 1167, 1417, 1454
Hpy188III TCNNGA 9 cut(s) 49, 256, 404, 773, 799, 970, 985, 1072, 1174
Hpy8I GTNNAC 2 cut(s) 305, 1217
Hpy99I CGWCG 1 cut(s) 139
HpyAV CCTTC 3 cut(s) 450, 891, 1276
HpyCH4III ACNGT 5 cut(s) 43, 157, 982, 1202, 1401
HpyCH4IV ACGT 3 cut(s) 10, 560, 1326
HpyCH4V TGCA 3 cut(s) 616, 699, 1430
HpyF10VI GCNNNNNNNGC 1 cut(s) 62
HpyF3I CTNAG 6 cut(s) 182, 279, 288, 378, 387, 506
HpySE526I ACGT 3 cut(s) 10, 560, 1326
Hsp92I GRCGYC 1 cut(s) 734
Hsp92II CATG 5 cut(s) 470, 497, 793, 925, 1279
HspAI GCGC 2 cut(s) 734, 930
KasI GGCGCC 1 cut(s) 733
Kpn2I TCCGGA 2 cut(s) 772, 1071
Kzo9I GATC 5 cut(s) 51, 273, 769, 1378, 1449
LguI GCTCTTC 1 cut(s) 405
LmnI GCTCC 5 cut(s) 343, 923, 1002, 1010, 1366
Lsp1109I GCAGC 1 cut(s) 573
LweI GCATC 2 cut(s) 472, 549
MaeI CTAG 1 cut(s) 354
MaeII ACGT 3 cut(s) 10, 560, 1326
MaeIII GTNAC 6 cut(s) 232, 520, 632, 706, 1078, 1261
MalI GATC 5 cut(s) 53, 275, 771, 1380, 1451
MbiI CCGCTC 2 cut(s) 846, 918
MboI GATC 5 cut(s) 51, 273, 769, 1378, 1449
MboII GAAGA 7 cut(s) 12, 132, 151, 392, 468, 580, 1345
MflI RGATCY 2 cut(s) 273, 1449
MhlI GDGCHC 2 cut(s) 1007, 1134
MluCI AATT 1 cut(s) 83
Mly113I GGCGCC 1 cut(s) 734
MlyI GAGTC 1 cut(s) 358
MroI TCCGGA 2 cut(s) 772, 1071
MroXI GAANNNNTTC 1 cut(s) 880
MseI TTAA 7 cut(s) 309, 345, 591, 794, 1026, 1113, 1254
MslI CAYNNNNRTG 4 cut(s) 690, 719, 1137, 1280
MspI CCGG 6 cut(s) 114, 165, 773, 1009, 1057, 1072
MspR9I CCNGG 4 cut(s) 321, 1009, 1038, 1058
Mva1269I GAATGC 1 cut(s) 1432
MvaI CCWGG 2 cut(s) 321, 1038
MwoI GCNNNNNNNGC 1 cut(s) 62
NarI GGCGCC 1 cut(s) 734
NciI CCSGG 2 cut(s) 1009, 1058
NcoI CCATGG 1 cut(s) 921
NdeI CATATG 3 cut(s) 445, 691, 871
NdeII GATC 5 cut(s) 51, 273, 769, 1378, 1449
NlaIII CATG 5 cut(s) 470, 497, 793, 925, 1279
NlaIV GGNNCC 3 cut(s) 735, 854, 1348
NmuCI GTSAC 4 cut(s) 232, 632, 706, 1078
NspI RCATGY 2 cut(s) 793, 1279
NspV TTCGAA 1 cut(s) 744
PaeR7I CTCGAG 1 cut(s) 1172
PciI ACATGT 2 cut(s) 789, 1275
PciSI GCTCTTC 1 cut(s) 405
PctI GAATGC 1 cut(s) 1432
PdmI GAANNNNTTC 1 cut(s) 880
PfeI GAWTC 9 cut(s) 171, 391, 502, 665, 776, 831, 1146, 1246, 1418
Pfl23II CGTACG 1 cut(s) 1323
PflMI CCANNNNNTGG 1 cut(s) 1142
PfoI TCCNGGA 1 cut(s) 1056
PkrI GCNGC 2 cut(s) 92, 588
PleI GAGTC 1 cut(s) 358
PluTI GGCGCC 1 cut(s) 737
PpsI GAGTC 1 cut(s) 358
Ppu21I YACGTR 1 cut(s) 1327
PscI ACATGT 2 cut(s) 789, 1275
PsiI TTATAA 1 cut(s) 270
Psp124BI GAGCTC 1 cut(s) 1007
Psp6I CCWGG 2 cut(s) 319, 1036
PspFI CCCAGC 1 cut(s) 1357
PspGI CCWGG 2 cut(s) 319, 1036
PspLI CGTACG 1 cut(s) 1323
PspN4I GGNNCC 3 cut(s) 735, 854, 1348
PspPI GGNCC 3 cut(s) 470, 605, 853
PsrI GAACNNNNNNTAC 2 cut(s) 1169, 1201
PsuI RGATCY 2 cut(s) 273, 1449
RsaI GTAC 2 cut(s) 1218, 1325
RsaNI GTAC 2 cut(s) 1217, 1324
RseI CAYNNNNRTG 4 cut(s) 690, 719, 1137, 1280
SacI GAGCTC 1 cut(s) 1007
SapI GCTCTTC 1 cut(s) 405
SaqAI TTAA 7 cut(s) 309, 345, 591, 794, 1026, 1113, 1254
SatI GCNGC 2 cut(s) 91, 587
Sau3AI GATC 5 cut(s) 51, 273, 769, 1378, 1449
Sau96I GGNCC 3 cut(s) 470, 605, 853
SchI GAGTC 1 cut(s) 358
ScrFI CCNGG 4 cut(s) 321, 1009, 1038, 1058
SduI GDGCHC 2 cut(s) 1007, 1134
SfaNI GCATC 2 cut(s) 472, 549
SfcI CTRYAG 1 cut(s) 189
SfoI GGCGCC 1 cut(s) 735
Sfr274I CTCGAG 1 cut(s) 1172
SfuI TTCGAA 1 cut(s) 744
SinI GGWCC 3 cut(s) 470, 605, 853
SlaI CTCGAG 1 cut(s) 1172
SmiMI CAYNNNNRTG 4 cut(s) 690, 719, 1137, 1280
SmlI CTYRAG 1 cut(s) 1172
SmoI CTYRAG 1 cut(s) 1172
SpeI ACTAGT 1 cut(s) 353
Sse9I AATT 1 cut(s) 83
SsiI CCGC 5 cut(s) 90, 846, 901, 916, 1032
SspDI GGCGCC 1 cut(s) 733
SspI AATATT 1 cut(s) 991
SspMI CTAG 1 cut(s) 354
SstI GAGCTC 1 cut(s) 1007
StyD4I CCNGG 4 cut(s) 319, 1007, 1036, 1056
StyI CCWWGG 2 cut(s) 921, 1231
TaaI ACNGT 5 cut(s) 43, 157, 982, 1202, 1401
TaiI ACGT 3 cut(s) 13, 563, 1329
TaqI TCGA 7 cut(s) 255, 744, 768, 798, 971, 984, 1173
TasI AATT 1 cut(s) 83
TauI GCSGC 1 cut(s) 93
TfiI GAWTC 9 cut(s) 171, 391, 502, 665, 776, 831, 1146, 1246, 1418
Tru1I TTAA 7 cut(s) 309, 345, 591, 794, 1026, 1113, 1254
Tru9I TTAA 7 cut(s) 309, 345, 591, 794, 1026, 1113, 1254
TscAI CASTG 9 cut(s) 46, 250, 340, 615, 763, 1195, 1227, 1287, 1322
TseFI GTSAC 4 cut(s) 232, 632, 706, 1078
TseI GCWGC 1 cut(s) 586
Tsp45I GTSAC 4 cut(s) 232, 632, 706, 1078
TspDTI ATGAA 5 cut(s) 64, 423, 432, 478, 482
TspGWI ACGGA 2 cut(s) 330, 1353
TspRI CASTG 9 cut(s) 46, 250, 340, 615, 763, 1195, 1227, 1287, 1322
Van91I CCANNNNNTGG 1 cut(s) 1142
VpaK11BI GGWCC 3 cut(s) 470, 605, 853
XceI RCATGY 2 cut(s) 793, 1279
XhoI CTCGAG 1 cut(s) 1172
XmnI GAANNNNTTC 1 cut(s) 880
XspI CTAG 1 cut(s) 354
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.