AT4G03175

Protein kinase domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0023734
Physical Location & Seq
Reverse (-)
1402088 .. 1402869
782 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G03175.1

Sequence Viewer

Length: 297 bp
ATGATATTGGCTAGGATTGTTGCAGTTTTAGGTCCTATCGAAACAGAGATGCTAAAGAAAGGTCAAGAGACACATAAATACTTCACCAAAGAGTATGATCTCTACCACTTAAACGAGGAGAGCAATGAGATTGAATACATAATCACAGAAGAATCAAGCTTGGAAGAACAACTACAAGTTAGTGATGAATTGTTCTTAGATTTTGTAAGGACTCTACTTGAGATCAATCCTTTGAGACGTCCAACAGCTCTCGAGGCACTTAACCACCCTTGGCTCTCTTCTTCTTCTTACAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000075 GO:0000166 GO:0000278 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005524 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005826 GO:0005856 GO:0005886 GO:0005938 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007049 GO:0007093 GO:0007154 GO:0007165 GO:0007346 GO:0008104 GO:0008144 GO:0008150 GO:0008152 GO:0008289 GO:0008360 GO:0008361 GO:0009898 GO:0009987 GO:0010389 GO:0010564 GO:0010948 GO:0010972 GO:0015629 GO:0016020 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017076 GO:0019538 GO:0019897 GO:0019898 GO:0022402 GO:0022603 GO:0022604 GO:0023052 GO:0030307 GO:0030427 GO:0030554 GO:0030863 GO:0030864 GO:0031234 GO:0031567 GO:0031569 GO:0032153 GO:0032155 GO:0032465 GO:0032535 GO:0032553 GO:0032555 GO:0032559 GO:0032878 GO:0032879 GO:0032880 GO:0032954 GO:0032956 GO:0032970 GO:0033036 GO:0033043 GO:0034613 GO:0035091 GO:0035556 GO:0035639 GO:0035839 GO:0036094 GO:0036211 GO:0040008 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043412 GO:0044087 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044430 GO:0044444 GO:0044446 GO:0044448 GO:0044459 GO:0044464 GO:0045786 GO:0045927 GO:0045930 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048638 GO:0048639 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051128 GO:0051130 GO:0051179 GO:0051285 GO:0051286 GO:0051302 GO:0051493 GO:0051510 GO:0051512 GO:0051516 GO:0051518 GO:0051519 GO:0051641 GO:0051716 GO:0051726 GO:0060341 GO:0065007 GO:0065008 GO:0070727 GO:0070938 GO:0071342 GO:0071704 GO:0071840 GO:0071944 GO:0072395 GO:0072413 GO:0072453 GO:0072471 GO:0090066 GO:0097159 GO:0097367 GO:0098552 GO:0098562 GO:0099568 GO:0099738 GO:0120105 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:1901648 GO:1901981 GO:1901987 GO:1901988 GO:1901990 GO:1901991 GO:1902412 GO:1902471 GO:1902749 GO:1902750 GO:1903047 GO:1903066 GO:1903067 GO:1903076 GO:1903077 GO:1903436 GO:1903505 GO:1903827 GO:1903828 GO:1904375 GO:1904376 GO:1905475 GO:1905476 GO:2000073 GO:2000769
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase

Protein Analysis

98

Amino Acids

11.49

Weight (kDa)

4.58

Isoelectric Point (pI)

69.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0023734)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G03175
pyrus_communis pycom06g21010
rosa_multiflora Rmu_sc0004449.1_g000001

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 241
AcyI GRCGYC 1 cut(s) 238
AgsI TTSAA 1 cut(s) 134
AluBI AGCT 2 cut(s) 159, 248
AluI AGCT 2 cut(s) 159, 248
Alw26I GTCTC 2 cut(s) 62, 229
Ama87I CYCGRG 1 cut(s) 251
AspS9I GGNCC 1 cut(s) 32
AsuHPI GGTGA 1 cut(s) 76
AvaI CYCGRG 1 cut(s) 251
AvaII GGWCC 1 cut(s) 32
BarI GAAGNNNNNNTAC 2 cut(s) 156, 188
BcoDI GTCTC 2 cut(s) 62, 229
BfaI CTAG 1 cut(s) 12
Bme18I GGWCC 1 cut(s) 32
BmeT110I CYCGRG 1 cut(s) 251
BmgT120I GGNCC 1 cut(s) 32
BmsI GCATC 1 cut(s) 39
BpuEI CTTGAG 1 cut(s) 239
BsaHI GRCGYC 1 cut(s) 238
BsaJI CCNNGG 1 cut(s) 269
Bse3DI GCAATG 1 cut(s) 130
BseDI CCNNGG 1 cut(s) 269
BseMI GCAATG 1 cut(s) 130
BseRI GAGGAG 1 cut(s) 131
BsiHKCI CYCGRG 1 cut(s) 251
BsmAI GTCTC 2 cut(s) 62, 229
BsmBI CGTCTC 1 cut(s) 229
BsoBI CYCGRG 1 cut(s) 251
Bsp143I GATC 2 cut(s) 97, 222
BsrDI GCAATG 1 cut(s) 130
BssECI CCNNGG 1 cut(s) 269
BssMI GATC 2 cut(s) 97, 222
BssNI GRCGYC 1 cut(s) 238
BssT1I CCWWGG 1 cut(s) 269
Bst6I CTCTTC 1 cut(s) 283
BstACI GRCGYC 1 cut(s) 238
BstDEI CTNAG 1 cut(s) 196
BstKTI GATC 2 cut(s) 100, 225
BstMAI GTCTC 2 cut(s) 62, 229
BstMBI GATC 2 cut(s) 97, 222
BstMWI GCNNNNNNNGC 1 cut(s) 254
Cfr13I GGNCC 1 cut(s) 32
CviJI RGCY 4 cut(s) 11, 159, 248, 274
CviKI_1 RGCY 4 cut(s) 11, 159, 248, 274
DdeI CTNAG 1 cut(s) 196
DpnI GATC 2 cut(s) 99, 224
DpnII GATC 2 cut(s) 97, 222
Eam1104I CTCTTC 1 cut(s) 283
EarI CTCTTC 1 cut(s) 283
Eco130I CCWWGG 1 cut(s) 269
Eco47I GGWCC 1 cut(s) 32
Eco88I CYCGRG 1 cut(s) 251
EcoO109I RGGNCCY 1 cut(s) 32
EcoT14I CCWWGG 1 cut(s) 269
ErhI CCWWGG 1 cut(s) 269
Esp3I CGTCTC 1 cut(s) 229
FaiI YATR 3 cut(s) 75, 96, 140
FspBI CTAG 1 cut(s) 12
Hin1I GRCGYC 1 cut(s) 238
HindIII AAGCTT 1 cut(s) 157
HinfI GANTC 2 cut(s) 152, 211
HphI GGTGA 1 cut(s) 76
Hpy188III TCNNGA 2 cut(s) 65, 251
HpyCH4IV ACGT 1 cut(s) 238
HpyCH4V TGCA 1 cut(s) 23
HpyF10VI GCNNNNNNNGC 1 cut(s) 254
HpyF3I CTNAG 1 cut(s) 196
HpySE526I ACGT 1 cut(s) 238
Hsp92I GRCGYC 1 cut(s) 238
Kzo9I GATC 2 cut(s) 97, 222
LweI GCATC 1 cut(s) 39
MaeI CTAG 1 cut(s) 12
MaeII ACGT 1 cut(s) 238
MalI GATC 2 cut(s) 99, 224
MboI GATC 2 cut(s) 97, 222
MboII GAAGA 5 cut(s) 161, 176, 270, 273, 276
MluCI AATT 1 cut(s) 188
MlyI GAGTC 1 cut(s) 205
MmeI TCCRAC 1 cut(s) 266
MnlI CCTC 2 cut(s) 109, 247
MseI TTAA 2 cut(s) 110, 261
MwoI GCNNNNNNNGC 1 cut(s) 254
NdeII GATC 2 cut(s) 97, 222
PaeR7I CTCGAG 1 cut(s) 251
PfeI GAWTC 1 cut(s) 152
PleI GAGTC 1 cut(s) 205
PpsI GAGTC 1 cut(s) 205
PpuMI RGGWCCY 1 cut(s) 32
Psp5II RGGWCCY 1 cut(s) 32
PspPI GGNCC 1 cut(s) 32
PspPPI RGGWCCY 1 cut(s) 32
SaqAI TTAA 2 cut(s) 110, 261
Sau3AI GATC 2 cut(s) 97, 222
Sau96I GGNCC 1 cut(s) 32
SchI GAGTC 1 cut(s) 205
SetI ASST 5 cut(s) 34, 64, 161, 241, 250
SfaNI GCATC 1 cut(s) 39
Sfr274I CTCGAG 1 cut(s) 251
SinI GGWCC 1 cut(s) 32
SlaI CTCGAG 1 cut(s) 251
SmlI CTYRAG 2 cut(s) 218, 251
SmoI CTYRAG 2 cut(s) 218, 251
Sse9I AATT 1 cut(s) 188
SspMI CTAG 1 cut(s) 12
StyI CCWWGG 1 cut(s) 269
TaiI ACGT 1 cut(s) 241
TaqI TCGA 2 cut(s) 39, 252
TasI AATT 1 cut(s) 188
TfiI GAWTC 1 cut(s) 152
Tru1I TTAA 2 cut(s) 110, 261
Tru9I TTAA 2 cut(s) 110, 261
TspDTI ATGAA 1 cut(s) 201
VpaK11BI GGWCC 1 cut(s) 32
XhoI CTCGAG 1 cut(s) 251
XspI CTAG 1 cut(s) 12
ZraI GACGTC 1 cut(s) 239
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.