AT4G11440

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
6955534 .. 6958895
3362 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G11440.2

Sequence Viewer

Length: 1887 bp
ATGTCTTCTTCTACGAAAGGATCTGTTAAGAAGAGTTCGATTAAACATAGTTGCAACTTAGCTGAGGTTAAGAGGAAGCTTTCAAAGATCAGTGATCATCATTCACATGTAGAGTATGCTTATGCCTTCCAGAGGGACAATAGAGAAAGAGTAGATACTAGGTTGAGTCAAATCCTCAGTAGGGATGCGTTGATATCAGCCGTTGATTTGTTGTGGGATCGCTCGGGTTTTGTTTCACTGAAAGAAGGGAATTTTGATTATGTAGATAGGGATGAAGTTAGTTCAGAAAAGGCTAAGTCTCAATTGTCATCGACTCCACAGTCTAGGGTTAGATTATTGGGAGTGGCTGAAAAGATGTATAGTTTCGATCCGTATAACCGAAAAAGTTTGTTGAATCAGACTGATGGATCTAAGTCTATATGTGGTTCTTGCAAAGGGATTGGTTTTCCGTTCGAGGCTAGATGGAAGACGTTGTATAGCTGGATGGAAGGAGTGCTTCCAAGTTCTACTAGATATCATGAAGAAGGGGCTGAGATTGAGAAGAGAGAAAATTTTGAAGGCTGTATTCTTAATCCAGTGAGCAGTAAAGAAGAACTCGCATCAAGAAATGGCGATGGTTGTGATTGTGTCTTTGATGCCATTGGTGCCAAGGACCAATCAACTGTAATTGAACCAAGGAGTCTTCTATTAGCAACGGTTGCAGAATCAGTGGTAGACACTAGAGTATCTAGATCTAATGATGTGAACTATCTCTTTTTGCTTTACAAAGATAGGTGTGTCAATAATAAAGGAGTGAATATGATAAGTTCAAAATGTAGCACGGATTGTGATGCTGAGGTTTCTTCTTCAGGGAATAACTTAGACGAAGACTGCTTATCTATCGTTGAAAATAAACAGTTGCTTGAGAAAGATAGAAATGACAAAGAGACTGAAGTTTGTTTGTCCTCTCCAGAAACGACTACTTACGCTTTTGCTAAACAGAGACATGCTTTTGCTGGTGCGTTGGCAGGCATAAGCGTCAGTCTTTGTCTTCATCCACTTGATACCGTTAAGACAATGATTCAGTCATGCCGCTTGGAGGAGAAGTCTCTATGCAATACTGGGAGATCAATTATATCAGAAAGAGGTTTTTCTGGACTTTATCGAGGGATTGCTAGCAACATTGCCTCATCAGCTCCTATCTCTGCCCTCTATACGTTCACTTATGAAACCGTTAAAGGAACTCTGCTTCCTCTTTTTCCTAAGGAATATTGCTCCCTAGCCCACTGCTTAGCTGGTGGTTCTGCAAGCATTGCAACTTCTTTTATCTTCACGCCTAGTGAGCGCATAAAACAGCAGATGCAAGTCAGTTCACATTATCGCAATTGCTGGACCGCATTGGTTGGAATCATCCAAAAGGGTGGTCTGCTTTCTTTATATGCTGGATGGACTGCAGTGCTATGTAGAAATATCCCGCACTCAATCATTAAGTTCTATGTCTATGAAAACATGAAGCAAATGGTATTACCATCCCCAGGCCCTTGTGGTGAAATGGCTCAACCCACAACATTACAAACGCTTACCTGTGGAGGACTAGCGGGATCTGCTGCTGCTTTCTTCACAACCCCATTTGATGTAGTAAAAACAAGATTACAAACTCAGATTCCCGGATCTAGAAACCAACATCCTAGTGTCTATCAAACTCTTCAATCAATACGAAGGCAAGAAGGTCTGAGAGGGCTATACAGAGGCTTGATCCCCAGACTAGTGATGTACATGTCGCAAGGAGCTATATTCTTTGCTTCGTATGAATTTTACAAGAGCGTACTCTCTCTAGCAGCGGCGCAGCCTAATACGTCAGCTCTCTCTGGCACAAAACAAAAGATGGAGATAGCCTTAAATCGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

628

Amino Acids

69.39

Weight (kDa)

8.67

Isoelectric Point (pI)

48.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mito_carr PF00153 328 - 409 5.6e-18 Mitochondrial carrier protein
Mito_carr PF00153 420 - 501 1e-16 Mitochondrial carrier protein
Mito_carr PF00153 514 - 603 1.8e-25 Mitochondrial carrier protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 319
AccB1I GGYRCC 1 cut(s) 644
AccI GTMKAC 1 cut(s) 714
AciI CCGC 5 cut(s) 1072, 1374, 1454, 1577, 1820
AclWI GGATC 7 cut(s) 28, 225, 362, 415, 1588, 1657, 1729
AcsI RAATTY 3 cut(s) 250, 550, 1790
AcuI CTGAAG 2 cut(s) 831, 951
AfaI GTAC 2 cut(s) 1754, 1806
AfiI CCNNNNNNNGG 4 cut(s) 132, 181, 1078, 1514
AflIII ACRYGT 2 cut(s) 106, 1755
AgsI TTSAA 7 cut(s) 84, 394, 557, 671, 810, 887, 1688
AhlI ACTAGT 1 cut(s) 1744
AjnI CCWGG 1 cut(s) 1513
AloI GAACNNNNNNTCC 2 cut(s) 1213, 1245
AluBI AGCT 7 cut(s) 62, 79, 480, 1175, 1274, 1769, 1841
AluI AGCT 7 cut(s) 62, 79, 480, 1175, 1274, 1769, 1841
Alw26I GTCTC 4 cut(s) 303, 920, 976, 1092
AlwI GGATC 7 cut(s) 28, 225, 362, 415, 1588, 1657, 1729
Ama87I CYCGRG 1 cut(s) 223
AoxI GGCC 1 cut(s) 1516
ApeKI GCWGC 4 cut(s) 1586, 1589, 1817, 1825
ApoI RAATTY 3 cut(s) 250, 550, 1790
ArsI GACNNNNNNTTYG 2 cut(s) 1387, 1419
AspLEI GCGC 2 cut(s) 1326, 1825
AspS9I GGNCC 3 cut(s) 652, 1371, 1517
AsuC2I CCSGG 1 cut(s) 1647
AsuHPI GGTGA 1 cut(s) 1538
AsuNHI GCTAGC 1 cut(s) 1154
AvaI CYCGRG 1 cut(s) 223
AvaII GGWCC 2 cut(s) 652, 1371
AxyI CCTNAGG 1 cut(s) 1242
BaeI ACNNNNGTAYC 2 cut(s) 708, 741
BanI GGYRCC 1 cut(s) 644
BbsI GAAGAC 4 cut(s) 473, 674, 873, 1022
BbvCI CCTCAGC 2 cut(s) 63, 834
BbvI GCAGC 4 cut(s) 1573, 1576, 1829, 1837
BccI CCATC 7 cut(s) 398, 456, 478, 608, 1419, 1516, 1858
BceAI ACGGC 1 cut(s) 185
BciT130I CCWGG 1 cut(s) 1515
BclI TGATCA 1 cut(s) 94
BcnI CCSGG 1 cut(s) 1647
BcoDI GTCTC 4 cut(s) 303, 920, 976, 1092
BcuI ACTAGT 1 cut(s) 1744
BfmI CTRYAG 1 cut(s) 1431
BglII AGATCT 1 cut(s) 731
BisI GCNGC 6 cut(s) 1072, 1587, 1590, 1818, 1821, 1826
BlpI GCTNAGC 1 cut(s) 1270
BlsI GCNGC 6 cut(s) 1073, 1588, 1591, 1819, 1822, 1827
Bme1390I CCNGG 2 cut(s) 1515, 1647
Bme18I GGWCC 2 cut(s) 652, 1371
BmeT110I CYCGRG 1 cut(s) 223
BmgT120I GGNCC 3 cut(s) 652, 1371, 1517
BmiI GGNNCC 1 cut(s) 646
BmrFI CCNGG 2 cut(s) 1515, 1647
BmrI ACTGGG 1 cut(s) 1110
BmsI GCATC 5 cut(s) 175, 608, 625, 820, 1329
BmtI GCTAGC 1 cut(s) 1158
BmuI ACTGGG 1 cut(s) 1110
BpiI GAAGAC 4 cut(s) 473, 674, 873, 1022
BpmI CTGGAG 1 cut(s) 933
Bpu10I CCTNAGC 2 cut(s) 63, 834
Bpu1102I GCTNAGC 1 cut(s) 1270
BpuEI CTTGAG 1 cut(s) 923
BpuMI CCSGG 1 cut(s) 1647
BsaJI CCNNGG 3 cut(s) 648, 674, 1513
BsaXI ACNNNNNCTCC 2 cut(s) 1070, 1100
Bsc4I CCNNNNNNNGG 4 cut(s) 132, 181, 1078, 1514
Bse1I ACTGG 2 cut(s) 575, 1105
Bse21I CCTNAGG 1 cut(s) 1242
Bse3DI GCAATG 2 cut(s) 1161, 1290
BseBI CCWGG 1 cut(s) 1515
BseDI CCNNGG 3 cut(s) 648, 674, 1513
BseGI GGATG 8 cut(s) 190, 277, 489, 1033, 1389, 1430, 1508, 1663
BseLI CCNNNNNNNGG 4 cut(s) 132, 181, 1078, 1514
BseMI GCAATG 2 cut(s) 1161, 1290
BseMII CTCAG 6 cut(s) 54, 190, 522, 825, 1652, 1703
BseNI ACTGG 2 cut(s) 575, 1105
BseRI GAGGAG 1 cut(s) 1094
BseXI GCAGC 4 cut(s) 1573, 1576, 1829, 1837
BshFI GGCC 1 cut(s) 1518
BshNI GGYRCC 1 cut(s) 644
BsiHKCI CYCGRG 1 cut(s) 223
BsiSI CCGG 1 cut(s) 1647
BslFI GGGAC 1 cut(s) 149
BslI CCNNNNNNNGG 4 cut(s) 132, 181, 1078, 1514
BsmAI GTCTC 4 cut(s) 303, 920, 976, 1092
BsmFI GGGAC 1 cut(s) 149
BsnI GGCC 1 cut(s) 1518
BsoBI CYCGRG 1 cut(s) 223
Bsp1407I TGTACA 1 cut(s) 1752
Bsp1720I GCTNAGC 1 cut(s) 1270
BspACI CCGC 5 cut(s) 1072, 1374, 1454, 1577, 1820
BspANI GGCC 1 cut(s) 1518
BspCNI CTCAG 6 cut(s) 55, 189, 523, 826, 1651, 1704
BspHI TCATGA 1 cut(s) 517
BspLI GGNNCC 1 cut(s) 646
BspMAI CTGCAG 1 cut(s) 1435
BspOI GCTAGC 1 cut(s) 1158
BspPI GGATC 7 cut(s) 28, 225, 362, 415, 1588, 1657, 1729
BspT107I GGYRCC 1 cut(s) 644
BsrDI GCAATG 2 cut(s) 1161, 1290
BsrGI TGTACA 1 cut(s) 1752
BsrI ACTGG 2 cut(s) 575, 1105
BssECI CCNNGG 3 cut(s) 648, 674, 1513
BssT1I CCWWGG 2 cut(s) 648, 674
Bst2UI CCWGG 1 cut(s) 1515
Bst4CI ACNGT 6 cut(s) 321, 664, 697, 897, 1048, 1213
Bst6I CTCTTC 3 cut(s) 26, 536, 1689
BstAPI GCANNNNNTGC 2 cut(s) 698, 1292
BstAUI TGTACA 1 cut(s) 1752
BstC8I GCNNGC 3 cut(s) 1009, 1156, 1288
BstENI CCTNNNNNAGG 1 cut(s) 130
BstF5I GGATG 8 cut(s) 190, 277, 489, 1033, 1389, 1430, 1508, 1663
BstHHI GCGC 2 cut(s) 1326, 1825
BstMAI GTCTC 4 cut(s) 303, 920, 976, 1092
BstMWI GCNNNNNNNGC 6 cut(s) 644, 698, 1172, 1292, 1321, 1583
BstNI CCWGG 1 cut(s) 1515
BstNSI RCATGY 3 cut(s) 110, 989, 1759
BstSCI CCNGG 2 cut(s) 1513, 1645
BstSFI CTRYAG 1 cut(s) 1431
BstV1I GCAGC 4 cut(s) 1573, 1576, 1829, 1837
BstV2I GAAGAC 4 cut(s) 473, 674, 873, 1022
BstX2I RGATCY 5 cut(s) 20, 407, 731, 1580, 1649
BstXI CCANNNNNNTGG 1 cut(s) 1400
BstYI RGATCY 5 cut(s) 20, 407, 731, 1580, 1649
Bsu36I CCTNAGG 1 cut(s) 1242
BsuRI GGCC 1 cut(s) 1518
BtgZI GCGATG 1 cut(s) 627
BtsCI GGATG 8 cut(s) 190, 277, 489, 1033, 1389, 1430, 1508, 1663
BtsI GCAGTG 2 cut(s) 1264, 1440
BtsIMutI CAGTG 6 cut(s) 97, 236, 582, 714, 1264, 1440
Cac8I GCNNGC 3 cut(s) 1009, 1156, 1288
CciI TCATGA 1 cut(s) 517
CfoI GCGC 2 cut(s) 1326, 1825
Cfr13I GGNCC 3 cut(s) 652, 1371, 1517
CseI GACGC 1 cut(s) 1006
Csp6I GTAC 2 cut(s) 1753, 1805
CviAII CATG 6 cut(s) 107, 518, 986, 1068, 1489, 1756
CviQI GTAC 2 cut(s) 1753, 1805
DrdI GACNNNNNNGTC 1 cut(s) 319
DseDI GACNNNNNNGTC 1 cut(s) 319
Eam1104I CTCTTC 3 cut(s) 26, 536, 1689
EarI CTCTTC 3 cut(s) 26, 536, 1689
Eco130I CCWWGG 2 cut(s) 648, 674
Eco32I GATATC 2 cut(s) 195, 515
Eco47I GGWCC 2 cut(s) 652, 1371
Eco57I CTGAAG 2 cut(s) 831, 951
Eco81I CCTNAGG 1 cut(s) 1242
Eco88I CYCGRG 1 cut(s) 223
EcoNI CCTNNNNNAGG 1 cut(s) 130
EcoO109I RGGNCCY 1 cut(s) 1517
EcoRII CCWGG 1 cut(s) 1513
EcoRV GATATC 2 cut(s) 195, 515
EcoT14I CCWWGG 2 cut(s) 648, 674
ErhI CCWWGG 2 cut(s) 648, 674
FaeI CATG 6 cut(s) 110, 521, 989, 1071, 1492, 1759
FalI AAGNNNNNCTT 2 cut(s) 480, 512
FaqI GGGAC 1 cut(s) 149
FatI CATG 6 cut(s) 106, 517, 985, 1067, 1488, 1755
FauI CCCGC 2 cut(s) 1461, 1570
FbaI TGATCA 1 cut(s) 94
FblI GTMKAC 1 cut(s) 714
Fnu4HI GCNGC 6 cut(s) 1072, 1587, 1590, 1818, 1821, 1826
FokI GGATG 8 cut(s) 197, 284, 496, 1020, 1376, 1437, 1495, 1650
Fsp4HI GCNGC 6 cut(s) 1072, 1587, 1590, 1818, 1821, 1826
GlaI GCGC 2 cut(s) 1325, 1824
GluI GCNGC 6 cut(s) 1072, 1587, 1590, 1818, 1821, 1826
GsuI CTGGAG 1 cut(s) 933
HaeIII GGCC 1 cut(s) 1518
HapII CCGG 1 cut(s) 1647
HgaI GACGC 1 cut(s) 1006
HhaI GCGC 2 cut(s) 1326, 1825
Hin1II CATG 6 cut(s) 110, 521, 989, 1071, 1492, 1759
Hin6I GCGC 2 cut(s) 1324, 1823
HinP1I GCGC 2 cut(s) 1324, 1823
HindIII AAGCTT 1 cut(s) 77
HinfI GANTC 8 cut(s) 166, 313, 394, 679, 704, 1060, 1386, 1642
HpaII CCGG 1 cut(s) 1647
HphI GGTGA 1 cut(s) 1538
Hpy166II GTNNAC 4 cut(s) 715, 745, 1200, 1352
Hpy188I TCNGA 5 cut(s) 286, 399, 1120, 1641, 1713
Hpy188III TCNNGA 7 cut(s) 130, 518, 603, 729, 950, 1134, 1653
Hpy8I GTNNAC 4 cut(s) 715, 745, 1200, 1352
HpyAV CCTTC 7 cut(s) 136, 239, 482, 518, 551, 1692, 1700
HpyCH4III ACNGT 6 cut(s) 321, 664, 697, 897, 1048, 1213
HpyCH4IV ACGT 3 cut(s) 470, 1196, 1835
HpyCH4V TGCA 8 cut(s) 54, 432, 701, 1095, 1286, 1295, 1342, 1433
HpyF10VI GCNNNNNNNGC 6 cut(s) 644, 698, 1172, 1292, 1321, 1583
HpySE526I ACGT 3 cut(s) 470, 1196, 1835
Hsp92II CATG 6 cut(s) 110, 521, 989, 1071, 1492, 1759
HspAI GCGC 2 cut(s) 1324, 1823
Ksp22I TGATCA 1 cut(s) 94
LmnI GCTCC 3 cut(s) 1180, 1259, 1766
Lsp1109I GCAGC 4 cut(s) 1573, 1576, 1829, 1837
LweI GCATC 5 cut(s) 175, 608, 625, 820, 1329
MaeII ACGT 3 cut(s) 470, 1196, 1835
MfeI CAATTG 2 cut(s) 302, 1363
MflI RGATCY 5 cut(s) 20, 407, 731, 1580, 1649
MluCI AATT 7 cut(s) 250, 302, 550, 666, 1110, 1363, 1790
MlyI GAGTC 3 cut(s) 175, 307, 688
MmeI TCCRAC 1 cut(s) 1363
MseI TTAA 9 cut(s) 27, 42, 69, 570, 1050, 1215, 1467, 1877, 1885
MslI CAYNNNNRTG 2 cut(s) 105, 1668
MspA1I CMGCKG 1 cut(s) 1820
MspI CCGG 1 cut(s) 1647
MspR9I CCNGG 2 cut(s) 1515, 1647
MunI CAATTG 2 cut(s) 302, 1363
MvaI CCWGG 1 cut(s) 1515
MwoI GCNNNNNNNGC 6 cut(s) 644, 698, 1172, 1292, 1321, 1583
NciI CCSGG 1 cut(s) 1647
NheI GCTAGC 1 cut(s) 1154
NlaIII CATG 6 cut(s) 110, 521, 989, 1071, 1492, 1759
NlaIV GGNNCC 1 cut(s) 646
NspI RCATGY 3 cut(s) 110, 989, 1759
PagI TCATGA 1 cut(s) 517
PciI ACATGT 2 cut(s) 106, 1755
PfeI GAWTC 5 cut(s) 394, 704, 1060, 1386, 1642
PfoI TCCNGGA 1 cut(s) 1645
PkrI GCNGC 6 cut(s) 1073, 1588, 1591, 1819, 1822, 1827
PleI GAGTC 3 cut(s) 174, 307, 687
PpsI GAGTC 3 cut(s) 174, 307, 687
PscI ACATGT 2 cut(s) 106, 1755
Psp6I CCWGG 1 cut(s) 1513
PspGI CCWGG 1 cut(s) 1513
PspN4I GGNNCC 1 cut(s) 646
PspPI GGNCC 3 cut(s) 652, 1371, 1517
PstI CTGCAG 1 cut(s) 1435
PsuI RGATCY 5 cut(s) 20, 407, 731, 1580, 1649
RsaI GTAC 2 cut(s) 1754, 1806
RsaNI GTAC 2 cut(s) 1753, 1805
RseI CAYNNNNRTG 2 cut(s) 105, 1668
SaqAI TTAA 9 cut(s) 27, 42, 69, 570, 1050, 1215, 1467, 1877, 1885
SatI GCNGC 6 cut(s) 1072, 1587, 1590, 1818, 1821, 1826
Sau96I GGNCC 3 cut(s) 652, 1371, 1517
SchI GAGTC 3 cut(s) 175, 307, 688
ScrFI CCNGG 2 cut(s) 1515, 1647
SfaNI GCATC 5 cut(s) 175, 608, 625, 820, 1329
SfcI CTRYAG 1 cut(s) 1431
SinI GGWCC 2 cut(s) 652, 1371
SmiMI CAYNNNNRTG 2 cut(s) 105, 1668
SmlI CTYRAG 1 cut(s) 902
SmoI CTYRAG 1 cut(s) 902
SpeI ACTAGT 1 cut(s) 1744
Sse9I AATT 7 cut(s) 250, 302, 550, 666, 1110, 1363, 1790
SsiI CCGC 5 cut(s) 1072, 1374, 1454, 1577, 1820
SspI AATATT 1 cut(s) 1250
StyD4I CCNGG 2 cut(s) 1513, 1645
StyI CCWWGG 2 cut(s) 648, 674
TaaI ACNGT 6 cut(s) 321, 664, 697, 897, 1048, 1213
TaiI ACGT 3 cut(s) 473, 1199, 1838
TaqI TCGA 5 cut(s) 38, 311, 366, 453, 1144
TasI AATT 7 cut(s) 250, 302, 550, 666, 1110, 1363, 1790
TatI WGTACW 1 cut(s) 1752
TauI GCSGC 2 cut(s) 1074, 1823
TfiI GAWTC 5 cut(s) 394, 704, 1060, 1386, 1642
Tru1I TTAA 9 cut(s) 27, 42, 69, 570, 1050, 1215, 1467, 1877, 1885
Tru9I TTAA 9 cut(s) 27, 42, 69, 570, 1050, 1215, 1467, 1877, 1885
TscAI CASTG 6 cut(s) 97, 243, 582, 714, 1271, 1440
TseI GCWGC 4 cut(s) 1586, 1589, 1817, 1825
TspDTI ATGAA 7 cut(s) 288, 534, 1022, 1221, 1497, 1505, 1803
TspGWI ACGGA 3 cut(s) 360, 438, 836
TspRI CASTG 6 cut(s) 97, 243, 582, 714, 1271, 1440
VpaK11BI GGWCC 2 cut(s) 652, 1371
XagI CCTNNNNNAGG 1 cut(s) 130
XapI RAATTY 3 cut(s) 250, 550, 1790
XbaI TCTAGA 2 cut(s) 728, 1652
XceI RCATGY 3 cut(s) 110, 989, 1759
XcmI CCANNNNNNNNNTGG 1 cut(s) 1271
XmiI GTMKAC 1 cut(s) 714
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.