AT4G15885
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0020923
Physical Location & Seq
Reverse (-)
9016451 .. 9016978
528 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G15885.1

Sequence Viewer

Length: 342 bp
ATGGCTAGCAGTCAGAACACAAGCGATACATCTTCAAGGCAGTATGAAACAACGGAGCCTTCTCTTGATGAAAACATTGATGCATTGCTTGAGGAAGAAGAGACCTTAATTACAGCACACAGAAAAGAGATCGAGGATACAATGGAAATAGTTCACGAGGAAATGAAATTACTAGCGAAGGTGGATCGGCCAGGGAGCATGATTGACAACTATGTTACACAGCTGAGCTTTGTGTTGTCCCGTAAAGCAGCTGGTCTTGTAAGTCTTCAAGCCCGTCTTGCTCGGTTCCAACACCGTCTGAAAGAACAGGAGATACTTAGCCGGAAGAGAGTTCCGCGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000070 GO:0000226 GO:0000278 GO:0000280 GO:0000775 GO:0000776 GO:0000819 GO:0000902 GO:0000904 GO:0003674 GO:0003774 GO:0003777 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005694 GO:0005737 GO:0005794 GO:0005795 GO:0005856 GO:0005871 GO:0005874 GO:0005875 GO:0005886 GO:0006928 GO:0006996 GO:0007010 GO:0007017 GO:0007018 GO:0007019 GO:0007049 GO:0007059 GO:0007080 GO:0007163 GO:0008017 GO:0008092 GO:0008150 GO:0008608 GO:0009505 GO:0009531 GO:0009653 GO:0009832 GO:0009834 GO:0009888 GO:0009987 GO:0010026 GO:0010087 GO:0010089 GO:0010090 GO:0012505 GO:0015630 GO:0015631 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0022411 GO:0030154 GO:0030312 GO:0030951 GO:0030952 GO:0031109 GO:0031984 GO:0032502 GO:0032984 GO:0032989 GO:0032991 GO:0035371 GO:0042546 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043624 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044427 GO:0044430 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0048468 GO:0048856 GO:0048869 GO:0050000 GO:0050789 GO:0050794 GO:0051010 GO:0051179 GO:0051234 GO:0051261 GO:0051276 GO:0051303 GO:0051310 GO:0051315 GO:0051640 GO:0051641 GO:0051649 GO:0051656 GO:0051983 GO:0065007 GO:0071554 GO:0071669 GO:0071840 GO:0071944 GO:0090058 GO:0090558 GO:0090626 GO:0097435 GO:0098687 GO:0098791 GO:0098813 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0140014 GO:1903047 GO:1903338 GO:1990752
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Kinesin RRM_1

Protein Analysis

113

Amino Acids

13.0

Weight (kDa)

5.41

Isoelectric Point (pI)

55.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0020923)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G15885
malus_domestica MD15G1185500.v1.1
pyrus_communis pycom15g16660
rosa_samantha Rh2AG397100 Rh2CG383600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 337
AciI CCGC 1 cut(s) 335
AclWI GGATC 1 cut(s) 192
AcoI YGGCCR 1 cut(s) 188
AgsI TTSAA 2 cut(s) 36, 269
AjnI CCWGG 1 cut(s) 190
AluBI AGCT 3 cut(s) 223, 228, 251
AluI AGCT 3 cut(s) 223, 228, 251
Alw26I GTCTC 1 cut(s) 95
AlwI GGATC 1 cut(s) 192
AoxI GGCC 1 cut(s) 188
ApeKI GCWGC 1 cut(s) 248
Asp700I GAANNNNTTC 1 cut(s) 150
AspLEI GCGC 1 cut(s) 339
AsuNHI GCTAGC 1 cut(s) 5
BauI CACGAG 1 cut(s) 155
BbsI GAAGAC 1 cut(s) 257
BbvI GCAGC 1 cut(s) 260
BciT130I CCWGG 1 cut(s) 192
BciVI GTATCC 1 cut(s) 130
BcoDI GTCTC 1 cut(s) 95
BfaI CTAG 3 cut(s) 6, 173, 340
BfuI GTATCC 1 cut(s) 130
BisI GCNGC 1 cut(s) 249
BlpI GCTNAGC 1 cut(s) 224
BlsI GCNGC 1 cut(s) 250
Bme1390I CCNGG 1 cut(s) 192
BmiI GGNNCC 2 cut(s) 57, 287
BmrFI CCNGG 1 cut(s) 192
BmsI GCATC 1 cut(s) 70
BmtI GCTAGC 1 cut(s) 9
BpiI GAAGAC 1 cut(s) 257
Bpu1102I GCTNAGC 1 cut(s) 224
BpuEI CTTGAG 1 cut(s) 110
BsaI GGTCTC 1 cut(s) 95
BsaJI CCNNGG 1 cut(s) 191
Bse3DI GCAATG 1 cut(s) 83
BseBI CCWGG 1 cut(s) 192
BseDI CCNNGG 1 cut(s) 191
BseMI GCAATG 1 cut(s) 83
BseMII CTCAG 1 cut(s) 215
BseXI GCAGC 1 cut(s) 260
Bsh1236I CGCG 1 cut(s) 337
BshFI GGCC 1 cut(s) 190
BsiSI CCGG 1 cut(s) 322
BslFI GGGAC 1 cut(s) 223
BsmAI GTCTC 1 cut(s) 95
BsmFI GGGAC 1 cut(s) 223
BsnI GGCC 1 cut(s) 190
Bso31I GGTCTC 1 cut(s) 95
Bsp143I GATC 2 cut(s) 129, 184
Bsp1720I GCTNAGC 1 cut(s) 224
BspACI CCGC 1 cut(s) 335
BspANI GGCC 1 cut(s) 190
BspCNI CTCAG 1 cut(s) 216
BspFNI CGCG 1 cut(s) 337
BspLI GGNNCC 2 cut(s) 57, 287
BspOI GCTAGC 1 cut(s) 9
BspPI GGATC 1 cut(s) 192
BspTNI GGTCTC 1 cut(s) 95
BsrDI GCAATG 1 cut(s) 83
BssECI CCNNGG 1 cut(s) 191
BssMI GATC 2 cut(s) 129, 184
BssSI CACGAG 1 cut(s) 155
Bst2BI CACGAG 1 cut(s) 155
Bst2UI CCWGG 1 cut(s) 192
Bst4CI ACNGT 1 cut(s) 296
Bst6I CTCTTC 2 cut(s) 93, 320
BstC8I GCNNGC 1 cut(s) 7
BstDEI CTNAG 2 cut(s) 224, 317
BstFNI CGCG 1 cut(s) 337
BstHHI GCGC 1 cut(s) 339
BstKTI GATC 2 cut(s) 132, 187
BstMAI GTCTC 1 cut(s) 95
BstMBI GATC 2 cut(s) 129, 184
BstMWI GCNNNNNNNGC 1 cut(s) 278
BstNI CCWGG 1 cut(s) 192
BstSCI CCNGG 1 cut(s) 190
BstUI CGCG 1 cut(s) 337
BstV1I GCAGC 1 cut(s) 260
BstV2I GAAGAC 1 cut(s) 257
BsuI GTATCC 1 cut(s) 130
BsuRI GGCC 1 cut(s) 190
Cac8I GCNNGC 1 cut(s) 7
CfoI GCGC 1 cut(s) 339
CviAII CATG 1 cut(s) 199
CviJI RGCY 8 cut(s) 5, 58, 190, 223, 228, 251, 272, 321
CviKI_1 RGCY 8 cut(s) 5, 58, 190, 223, 228, 251, 272, 321
DdeI CTNAG 2 cut(s) 224, 317
DpnI GATC 2 cut(s) 131, 186
DpnII GATC 2 cut(s) 129, 184
EaeI YGGCCR 1 cut(s) 188
Eam1104I CTCTTC 2 cut(s) 93, 320
EarI CTCTTC 2 cut(s) 93, 320
Eco31I GGTCTC 1 cut(s) 95
EcoRII CCWGG 1 cut(s) 190
EcoT22I ATGCAT 1 cut(s) 85
FaeI CATG 1 cut(s) 202
FaiI YATR 3 cut(s) 45, 200, 213
FalI AAGNNNNNCTT 2 cut(s) 261, 293
FaqI GGGAC 1 cut(s) 223
FatI CATG 1 cut(s) 198
Fnu4HI GCNGC 1 cut(s) 249
Fsp4HI GCNGC 1 cut(s) 249
FspBI CTAG 3 cut(s) 6, 173, 340
GlaI GCGC 1 cut(s) 338
GluI GCNGC 1 cut(s) 249
HaeIII GGCC 1 cut(s) 190
HapII CCGG 1 cut(s) 322
HhaI GCGC 1 cut(s) 339
Hin1II CATG 1 cut(s) 202
Hin6I GCGC 1 cut(s) 337
HinP1I GCGC 1 cut(s) 337
HpaII CCGG 1 cut(s) 322
Hpy166II GTNNAC 1 cut(s) 154
Hpy188I TCNGA 2 cut(s) 15, 300
Hpy188III TCNNGA 2 cut(s) 65, 155
Hpy8I GTNNAC 1 cut(s) 154
HpyAV CCTTC 2 cut(s) 69, 172
HpyCH4III ACNGT 1 cut(s) 296
HpyCH4V TGCA 1 cut(s) 83
HpyF10VI GCNNNNNNNGC 1 cut(s) 278
HpyF3I CTNAG 2 cut(s) 224, 317
Hsp92II CATG 1 cut(s) 202
HspAI GCGC 1 cut(s) 337
Kzo9I GATC 2 cut(s) 129, 184
LmnI GCTCC 2 cut(s) 55, 195
LpnPI CCDG 5 cut(s) 177, 204, 237, 293, 335
Lsp1109I GCAGC 1 cut(s) 260
LweI GCATC 1 cut(s) 70
MaeI CTAG 3 cut(s) 6, 173, 340
MaeIII GTNAC 1 cut(s) 214
MalI GATC 2 cut(s) 131, 186
MboI GATC 2 cut(s) 129, 184
MboII GAAGA 5 cut(s) 24, 107, 110, 257, 337
MluCI AATT 2 cut(s) 108, 167
MmeI TCCRAC 1 cut(s) 313
MnlI CCTC 3 cut(s) 85, 127, 151
Mph1103I ATGCAT 1 cut(s) 85
MroXI GAANNNNTTC 1 cut(s) 150
MseI TTAA 1 cut(s) 107
MspA1I CMGCKG 2 cut(s) 223, 251
MspI CCGG 1 cut(s) 322
MspR9I CCNGG 1 cut(s) 192
MvaI CCWGG 1 cut(s) 192
MvnI CGCG 1 cut(s) 337
MwoI GCNNNNNNNGC 1 cut(s) 278
NdeII GATC 2 cut(s) 129, 184
NheI GCTAGC 1 cut(s) 5
NlaIII CATG 1 cut(s) 202
NlaIV GGNNCC 2 cut(s) 57, 287
NsiI ATGCAT 1 cut(s) 85
PdmI GAANNNNTTC 1 cut(s) 150
PkrI GCNGC 1 cut(s) 250
Psp6I CCWGG 1 cut(s) 190
PspGI CCWGG 1 cut(s) 190
PspN4I GGNNCC 2 cut(s) 57, 287
PsrI GAACNNNNNNTAC 2 cut(s) 297, 329
PvuII CAGCTG 2 cut(s) 223, 251
SaqAI TTAA 1 cut(s) 107
SatI GCNGC 1 cut(s) 249
Sau3AI GATC 2 cut(s) 129, 184
ScrFI CCNGG 1 cut(s) 192
SetI ASST 5 cut(s) 107, 183, 225, 230, 253
SfaNI GCATC 1 cut(s) 70
SmlI CTYRAG 1 cut(s) 89
SmoI CTYRAG 1 cut(s) 89
Sse9I AATT 2 cut(s) 108, 167
SsiI CCGC 1 cut(s) 335
SspMI CTAG 3 cut(s) 6, 173, 340
StyD4I CCNGG 1 cut(s) 190
TaaI ACNGT 1 cut(s) 296
TaqI TCGA 1 cut(s) 132
TasI AATT 2 cut(s) 108, 167
Tru1I TTAA 1 cut(s) 107
Tru9I TTAA 1 cut(s) 107
TseI GCWGC 1 cut(s) 248
TspDTI ATGAA 3 cut(s) 60, 84, 179
TspGWI ACGGA 1 cut(s) 68
XmnI GAANNNNTTC 1 cut(s) 150
XspI CTAG 3 cut(s) 6, 173, 340
Zsp2I ATGCAT 1 cut(s) 85
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.