Rh2CG383600
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Forward (+)
52258331 .. 52259040
710 bp
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UTR
Exon/CDS
Intron
Rh2CG383600.1

Sequence Viewer

Length: 306 bp
ATGCCAAAATCTCATTCAAGGAATTCAAATTCAGACGATGATTTAAATGCCCTGTTACAGGAGGAGGAGGATCTTGTAAGTGCTCACCGGAAACAAGTGGAGGATACAATGAACATTGTTAAAGAGGAGATGAATTTGCTGGTAGAAGCAGACCAACCAGGAAATCAGCTGGATGATTATGTTACAAGATTGAATGCCATTCTATCTCAGAAGGCTGCTGGCATCCTGCAATTACAAAATCGTTTAGCTCATTTCCAGAAGCGTTTAAAAGAACATAATGTTCTAGTATCCTCTTCTGGTTACTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

101

Amino Acids

11.46

Weight (kDa)

5.24

Isoelectric Point (pI)

53.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0020923)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G15885
malus_domestica MD15G1185500.v1.1
pyrus_communis pycom15g16660
rosa_samantha Rh2AG397100 Rh2CG383600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 78
AcsI RAATTY 3 cut(s) 22, 28, 133
AfiI CCNNNNNNNGG 1 cut(s) 58
AgsI TTSAA 3 cut(s) 18, 27, 193
AjnI CCWGG 1 cut(s) 157
AjuI GAANNNNNNNTTGG 1 cut(s) 30
AluBI AGCT 2 cut(s) 169, 248
AluI AGCT 2 cut(s) 169, 248
Alw21I GWGCWC 1 cut(s) 85
AlwI GGATC 1 cut(s) 78
ApeKI GCWGC 1 cut(s) 215
ApoI RAATTY 3 cut(s) 22, 28, 133
AsuHPI GGTGA 1 cut(s) 77
Bbv12I GWGCWC 1 cut(s) 85
BbvI GCAGC 1 cut(s) 202
BciT130I CCWGG 1 cut(s) 159
BciVI GTATCC 2 cut(s) 97, 298
BfaI CTAG 1 cut(s) 284
BfuI GTATCC 2 cut(s) 97, 298
BisI GCNGC 1 cut(s) 216
BlsI GCNGC 1 cut(s) 217
Bme1390I CCNGG 1 cut(s) 159
BmrFI CCNGG 1 cut(s) 159
BmsI GCATC 1 cut(s) 231
BsaWI WCCGGW 1 cut(s) 87
Bsc4I CCNNNNNNNGG 1 cut(s) 58
BseBI CCWGG 1 cut(s) 159
BseGI GGATG 2 cut(s) 178, 222
BseLI CCNNNNNNNGG 1 cut(s) 58
BseMII CTCAG 1 cut(s) 221
BseRI GAGGAG 3 cut(s) 77, 80, 140
BseXI GCAGC 1 cut(s) 202
BsiHKAI GWGCWC 1 cut(s) 85
BsiSI CCGG 1 cut(s) 88
BslI CCNNNNNNNGG 1 cut(s) 58
BsmI GAATGC 1 cut(s) 199
Bsp1286I GDGCHC 1 cut(s) 85
Bsp143I GATC 1 cut(s) 70
BspCNI CTCAG 1 cut(s) 220
BspPI GGATC 1 cut(s) 78
BssMI GATC 1 cut(s) 70
Bst2UI CCWGG 1 cut(s) 159
Bst6I CTCTTC 1 cut(s) 298
BstC8I GCNNGC 1 cut(s) 220
BstDEI CTNAG 1 cut(s) 207
BstENI CCTNNNNNAGG 1 cut(s) 56
BstF5I GGATG 2 cut(s) 178, 222
BstKTI GATC 1 cut(s) 73
BstMBI GATC 1 cut(s) 70
BstNI CCWGG 1 cut(s) 159
BstSCI CCNGG 1 cut(s) 157
BstV1I GCAGC 1 cut(s) 202
BstX2I RGATCY 1 cut(s) 70
BstYI RGATCY 1 cut(s) 70
BsuI GTATCC 2 cut(s) 97, 298
BtsCI GGATG 2 cut(s) 178, 222
Cac8I GCNNGC 1 cut(s) 220
CviJI RGCY 3 cut(s) 169, 215, 248
CviKI_1 RGCY 3 cut(s) 169, 215, 248
DdeI CTNAG 1 cut(s) 207
DpnI GATC 1 cut(s) 72
DpnII GATC 1 cut(s) 70
DraI TTTAAA 2 cut(s) 45, 267
Eam1104I CTCTTC 1 cut(s) 298
EarI CTCTTC 1 cut(s) 298
EcoNI CCTNNNNNAGG 1 cut(s) 56
EcoRI GAATTC 1 cut(s) 22
EcoRII CCWGG 1 cut(s) 157
FaiI YATR 2 cut(s) 180, 276
Fnu4HI GCNGC 1 cut(s) 216
FokI GGATG 2 cut(s) 185, 209
Fsp4HI GCNGC 1 cut(s) 216
FspBI CTAG 1 cut(s) 284
GluI GCNGC 1 cut(s) 216
HapII CCGG 1 cut(s) 88
HpaII CCGG 1 cut(s) 88
HphI GGTGA 1 cut(s) 77
Hpy188I TCNGA 2 cut(s) 34, 210
Hpy188III TCNNGA 1 cut(s) 256
HpyAV CCTTC 1 cut(s) 205
HpyCH4V TGCA 1 cut(s) 229
HpyF3I CTNAG 1 cut(s) 207
Kzo9I GATC 1 cut(s) 70
Lsp1109I GCAGC 1 cut(s) 202
LweI GCATC 1 cut(s) 231
MaeI CTAG 1 cut(s) 284
MaeIII GTNAC 3 cut(s) 54, 181, 299
MalI GATC 1 cut(s) 72
MboI GATC 1 cut(s) 70
MboII GAAGA 1 cut(s) 285
MflI RGATCY 1 cut(s) 70
MhlI GDGCHC 1 cut(s) 85
MluCI AATT 4 cut(s) 22, 28, 133, 230
MnlI CCTC 6 cut(s) 55, 58, 61, 94, 118, 301
MseI TTAA 3 cut(s) 44, 120, 266
MspA1I CMGCKG 1 cut(s) 169
MspI CCGG 1 cut(s) 88
MspR9I CCNGG 1 cut(s) 159
Mva1269I GAATGC 1 cut(s) 199
MvaI CCWGG 1 cut(s) 159
NdeII GATC 1 cut(s) 70
PctI GAATGC 1 cut(s) 199
PkrI GCNGC 1 cut(s) 217
Psp6I CCWGG 1 cut(s) 157
PspGI CCWGG 1 cut(s) 157
PsuI RGATCY 1 cut(s) 70
PvuII CAGCTG 1 cut(s) 169
SaqAI TTAA 3 cut(s) 44, 120, 266
SatI GCNGC 1 cut(s) 216
Sau3AI GATC 1 cut(s) 70
ScrFI CCNGG 1 cut(s) 159
SduI GDGCHC 1 cut(s) 85
SetI ASST 2 cut(s) 171, 250
SfaNI GCATC 1 cut(s) 231
SmiI ATTTAAAT 1 cut(s) 45
Sse9I AATT 4 cut(s) 22, 28, 133, 230
SspMI CTAG 1 cut(s) 284
StyD4I CCNGG 1 cut(s) 157
SwaI ATTTAAAT 1 cut(s) 45
TasI AATT 4 cut(s) 22, 28, 133, 230
Tru1I TTAA 3 cut(s) 44, 120, 266
Tru9I TTAA 3 cut(s) 44, 120, 266
TseI GCWGC 1 cut(s) 215
TspDTI ATGAA 2 cut(s) 125, 146
XagI CCTNNNNNAGG 1 cut(s) 56
XapI RAATTY 3 cut(s) 22, 28, 133
XspI CTAG 1 cut(s) 284
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.