isoform X1
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G16695 AT4G16695 AT4G16695 |
| malus_domestica | MD04G1062500.v1.1 MD06G1056600.v1.1 |
| prunus_persica | Prupe.5G067000_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr7g0203631 |
| rosa_wichuraiana | Rw7G018080 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 123 |
| AciI | CCGC | 1 cut(s) | 65 |
| AclWI | GGATC | 1 cut(s) | 67 |
| AfaI | GTAC | 2 cut(s) | 50, 143 |
| AflIII | ACRYGT | 1 cut(s) | 121 |
| AgeI | ACCGGT | 1 cut(s) | 91 |
| AlwI | GGATC | 1 cut(s) | 67 |
| AsiGI | ACCGGT | 1 cut(s) | 91 |
| AsuHPI | GGTGA | 2 cut(s) | 28, 79 |
| BmiI | GGNNCC | 1 cut(s) | 30 |
| BsaBI | GATNNNNATC | 1 cut(s) | 74 |
| BsaWI | WCCGGW | 1 cut(s) | 91 |
| Bse118I | RCCGGY | 1 cut(s) | 91 |
| Bse8I | GATNNNNATC | 1 cut(s) | 74 |
| BseJI | GATNNNNATC | 1 cut(s) | 74 |
| Bsh1236I | CGCG | 1 cut(s) | 123 |
| BshTI | ACCGGT | 1 cut(s) | 91 |
| BsiSI | CCGG | 1 cut(s) | 92 |
| BslFI | GGGAC | 1 cut(s) | 110 |
| BsmFI | GGGAC | 1 cut(s) | 110 |
| Bsp143I | GATC | 3 cut(s) | 54, 59, 75 |
| BspACI | CCGC | 1 cut(s) | 65 |
| BspFNI | CGCG | 1 cut(s) | 123 |
| BspLI | GGNNCC | 1 cut(s) | 30 |
| BspPI | GGATC | 1 cut(s) | 67 |
| BsrFI | RCCGGY | 1 cut(s) | 91 |
| BssAI | RCCGGY | 1 cut(s) | 91 |
| BssMI | GATC | 3 cut(s) | 54, 59, 75 |
| Bst4CI | ACNGT | 2 cut(s) | 16, 48 |
| BstFNI | CGCG | 1 cut(s) | 123 |
| BstKTI | GATC | 3 cut(s) | 57, 62, 78 |
| BstMBI | GATC | 3 cut(s) | 54, 59, 75 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 120 |
| BstUI | CGCG | 1 cut(s) | 123 |
| Cfr10I | RCCGGY | 1 cut(s) | 91 |
| CseI | GACGC | 1 cut(s) | 112 |
| Csp6I | GTAC | 2 cut(s) | 49, 142 |
| CspAI | ACCGGT | 1 cut(s) | 91 |
| CviAII | CATG | 1 cut(s) | 103 |
| CviJI | RGCY | 1 cut(s) | 31 |
| CviKI_1 | RGCY | 1 cut(s) | 31 |
| CviQI | GTAC | 2 cut(s) | 49, 142 |
| DpnI | GATC | 3 cut(s) | 56, 61, 77 |
| DpnII | GATC | 3 cut(s) | 54, 59, 75 |
| FaeI | CATG | 1 cut(s) | 106 |
| FaiI | YATR | 2 cut(s) | 104, 172 |
| FaqI | GGGAC | 1 cut(s) | 110 |
| FatI | CATG | 1 cut(s) | 102 |
| HapII | CCGG | 1 cut(s) | 92 |
| HgaI | GACGC | 1 cut(s) | 112 |
| Hin1II | CATG | 1 cut(s) | 106 |
| HinfI | GANTC | 1 cut(s) | 37 |
| HpaII | CCGG | 1 cut(s) | 92 |
| HphI | GGTGA | 2 cut(s) | 28, 79 |
| Hpy188I | TCNGA | 2 cut(s) | 36, 59 |
| HpyAV | CCTTC | 1 cut(s) | 139 |
| HpyCH4III | ACNGT | 2 cut(s) | 16, 48 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 120 |
| Hsp92II | CATG | 1 cut(s) | 106 |
| Kzo9I | GATC | 3 cut(s) | 54, 59, 75 |
| LmnI | GCTCC | 1 cut(s) | 28 |
| LpnPI | CCDG | 1 cut(s) | 105 |
| MaeIII | GTNAC | 2 cut(s) | 42, 98 |
| MalI | GATC | 3 cut(s) | 56, 61, 77 |
| MboI | GATC | 3 cut(s) | 54, 59, 75 |
| MboII | GAAGA | 1 cut(s) | 129 |
| MluI | ACGCGT | 1 cut(s) | 121 |
| MlyI | GAGTC | 1 cut(s) | 46 |
| MnlI | CCTC | 1 cut(s) | 42 |
| MseI | TTAA | 1 cut(s) | 9 |
| MspI | CCGG | 1 cut(s) | 92 |
| MvnI | CGCG | 1 cut(s) | 123 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 120 |
| NdeII | GATC | 3 cut(s) | 54, 59, 75 |
| NlaIII | CATG | 1 cut(s) | 106 |
| NlaIV | GGNNCC | 1 cut(s) | 30 |
| PinAI | ACCGGT | 1 cut(s) | 91 |
| PleI | GAGTC | 1 cut(s) | 45 |
| PpsI | GAGTC | 1 cut(s) | 45 |
| PspN4I | GGNNCC | 1 cut(s) | 30 |
| RsaI | GTAC | 2 cut(s) | 50, 143 |
| RsaNI | GTAC | 2 cut(s) | 49, 142 |
| SaqAI | TTAA | 1 cut(s) | 9 |
| Sau3AI | GATC | 3 cut(s) | 54, 59, 75 |
| SchI | GAGTC | 1 cut(s) | 46 |
| SgeI | CNNG | 5 cut(s) | 48, 64, 104, 115, 134 |
| SsiI | CCGC | 1 cut(s) | 65 |
| TaaI | ACNGT | 2 cut(s) | 16, 48 |
| Tru1I | TTAA | 1 cut(s) | 9 |
| Tru9I | TTAA | 1 cut(s) | 9 |