mitochondrial transcription termination factor-related mTERF-related
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G19650 AT4G19650 |
| fragaria_vesca | FvH4_3g11940 |
| malus_domestica | MD10G1236900.v1.1 |
| prunus_persica | Prupe.4G107400_v2.0.a1 Prupe.4G107400_v2.0.a1 |
| pyrus_communis | pycom10g19810 |
| rosa_chinensis | RchiOBHm_Chr5g0019521 |
| rosa_laevigata | RLG00000032452 |
| rosa_multiflora | Rmu_sc0002759.1_g000049 |
| rosa_roxburghii | Rroxscaffold_1G00058540 |
| rosa_rugosa | Rorug05G0051500 |
| rosa_samantha | Rh5AG142300 Rh5BG140700 Rh5CG152800 Rh5DG141400 |
| rosa_wichuraiana | Rw5G012590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 310 |
| AccI | GTMKAC | 1 cut(s) | 302 |
| AccII | CGCG | 1 cut(s) | 523 |
| AccIII | TCCGGA | 1 cut(s) | 887 |
| AciI | CCGC | 4 cut(s) | 521, 751, 929, 1641 |
| AclI | AACGTT | 1 cut(s) | 437 |
| AclWI | GGATC | 2 cut(s) | 511, 524 |
| AcoI | YGGCCR | 1 cut(s) | 535 |
| AcsI | RAATTY | 4 cut(s) | 283, 613, 789, 896 |
| AcuI | CTGAAG | 2 cut(s) | 46, 1704 |
| AfaI | GTAC | 2 cut(s) | 371, 755 |
| AhlI | ACTAGT | 1 cut(s) | 653 |
| AluBI | AGCT | 8 cut(s) | 212, 454, 598, 780, 869, 1087, 1156, 1354 |
| AluI | AGCT | 8 cut(s) | 212, 454, 598, 780, 869, 1087, 1156, 1354 |
| Alw26I | GTCTC | 4 cut(s) | 20, 60, 257, 791 |
| AlwI | GGATC | 2 cut(s) | 511, 524 |
| Ama87I | CYCGRG | 1 cut(s) | 1246 |
| Aor13HI | TCCGGA | 1 cut(s) | 887 |
| AoxI | GGCC | 1 cut(s) | 535 |
| ApeKI | GCWGC | 1 cut(s) | 1601 |
| ApoI | RAATTY | 4 cut(s) | 283, 613, 789, 896 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1258, 1290 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 438 |
| AspLEI | GCGC | 1 cut(s) | 786 |
| AspS9I | GGNCC | 1 cut(s) | 1688 |
| AsuC2I | CCSGG | 2 cut(s) | 1526, 1651 |
| AsuHPI | GGTGA | 3 cut(s) | 1327, 1611, 1655 |
| AvaI | CYCGRG | 1 cut(s) | 1246 |
| AvaII | GGWCC | 1 cut(s) | 1688 |
| AxyI | CCTNAGG | 1 cut(s) | 365 |
| BamHI | GGATCC | 1 cut(s) | 516 |
| BbsI | GAAGAC | 3 cut(s) | 1019, 1248, 1271 |
| BbvI | GCAGC | 1 cut(s) | 1613 |
| BccI | CCATC | 2 cut(s) | 467, 1306 |
| BceAI | ACGGC | 1 cut(s) | 522 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1051, 1085 |
| BciVI | GTATCC | 3 cut(s) | 352, 873, 1548 |
| BcnI | CCSGG | 2 cut(s) | 1526, 1651 |
| BcoDI | GTCTC | 4 cut(s) | 20, 60, 257, 791 |
| BcuI | ACTAGT | 1 cut(s) | 653 |
| BfaI | CTAG | 4 cut(s) | 266, 654, 1116, 1286 |
| BfmI | CTRYAG | 3 cut(s) | 633, 702, 1355 |
| BfuI | GTATCC | 3 cut(s) | 352, 873, 1548 |
| BglII | AGATCT | 1 cut(s) | 1164 |
| BisI | GCNGC | 1 cut(s) | 1602 |
| BlsI | GCNGC | 1 cut(s) | 1603 |
| Bme1390I | CCNGG | 2 cut(s) | 1526, 1651 |
| Bme18I | GGWCC | 1 cut(s) | 1688 |
| BmeT110I | CYCGRG | 1 cut(s) | 1246 |
| BmgT120I | GGNCC | 1 cut(s) | 1688 |
| BmiI | GGNNCC | 3 cut(s) | 518, 886, 1523 |
| BmrFI | CCNGG | 2 cut(s) | 1526, 1651 |
| BmrI | ACTGGG | 1 cut(s) | 188 |
| BmsI | GCATC | 3 cut(s) | 676, 1588, 1636 |
| BmuI | ACTGGG | 1 cut(s) | 188 |
| BpiI | GAAGAC | 3 cut(s) | 1019, 1248, 1271 |
| BpmI | CTGGAG | 1 cut(s) | 815 |
| Bpu10I | CCTNAGC | 1 cut(s) | 599 |
| BpuMI | CCSGG | 2 cut(s) | 1526, 1651 |
| BsaBI | GATNNNNATC | 2 cut(s) | 327, 574 |
| BsaJI | CCNNGG | 2 cut(s) | 345, 446 |
| BsaWI | WCCGGW | 2 cut(s) | 765, 887 |
| Bse118I | RCCGGY | 1 cut(s) | 1385 |
| Bse1I | ACTGG | 2 cut(s) | 194, 675 |
| Bse21I | CCTNAGG | 1 cut(s) | 365 |
| Bse8I | GATNNNNATC | 2 cut(s) | 327, 574 |
| BseAI | TCCGGA | 1 cut(s) | 887 |
| BseDI | CCNNGG | 2 cut(s) | 345, 446 |
| BseGI | GGATG | 4 cut(s) | 588, 740, 830, 1312 |
| BseJI | GATNNNNATC | 2 cut(s) | 327, 574 |
| BseMII | CTCAG | 3 cut(s) | 681, 1064, 1401 |
| BseNI | ACTGG | 2 cut(s) | 194, 675 |
| BseRI | GAGGAG | 1 cut(s) | 848 |
| BseXI | GCAGC | 1 cut(s) | 1613 |
| Bsh1236I | CGCG | 1 cut(s) | 523 |
| BshFI | GGCC | 1 cut(s) | 537 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1246 |
| BsiSI | CCGG | 5 cut(s) | 766, 888, 1386, 1526, 1651 |
| BsmAI | GTCTC | 4 cut(s) | 20, 60, 257, 791 |
| BsmBI | CGTCTC | 2 cut(s) | 20, 257 |
| BsnI | GGCC | 1 cut(s) | 537 |
| BsoBI | CYCGRG | 1 cut(s) | 1246 |
| Bsp13I | TCCGGA | 1 cut(s) | 887 |
| Bsp143I | GATC | 4 cut(s) | 516, 1164, 1348, 1413 |
| BspACI | CCGC | 4 cut(s) | 521, 751, 929, 1641 |
| BspANI | GGCC | 1 cut(s) | 537 |
| BspCNI | CTCAG | 3 cut(s) | 682, 1065, 1402 |
| BspEI | TCCGGA | 1 cut(s) | 887 |
| BspFNI | CGCG | 1 cut(s) | 523 |
| BspLI | GGNNCC | 3 cut(s) | 518, 886, 1523 |
| BspPI | GGATC | 2 cut(s) | 511, 524 |
| BsrFI | RCCGGY | 1 cut(s) | 1385 |
| BsrI | ACTGG | 2 cut(s) | 194, 675 |
| BssAI | RCCGGY | 1 cut(s) | 1385 |
| BssECI | CCNNGG | 2 cut(s) | 345, 446 |
| BssMI | GATC | 4 cut(s) | 516, 1164, 1348, 1413 |
| BssT1I | CCWWGG | 1 cut(s) | 345 |
| Bst4CI | ACNGT | 5 cut(s) | 132, 161, 396, 637, 1332 |
| Bst6I | CTCTTC | 2 cut(s) | 112, 1211 |
| BstC8I | GCNNGC | 3 cut(s) | 782, 1110, 1425 |
| BstDSI | CCRYGG | 1 cut(s) | 446 |
| BstF5I | GGATG | 4 cut(s) | 588, 740, 830, 1312 |
| BstFNI | CGCG | 1 cut(s) | 523 |
| BstHHI | GCGC | 1 cut(s) | 786 |
| BstKTI | GATC | 4 cut(s) | 519, 1167, 1351, 1416 |
| BstMAI | GTCTC | 4 cut(s) | 20, 60, 257, 791 |
| BstMBI | GATC | 4 cut(s) | 516, 1164, 1348, 1413 |
| BstNSI | RCATGY | 1 cut(s) | 1427 |
| BstSCI | CCNGG | 2 cut(s) | 1524, 1649 |
| BstSFI | CTRYAG | 3 cut(s) | 633, 702, 1355 |
| BstUI | CGCG | 1 cut(s) | 523 |
| BstV1I | GCAGC | 1 cut(s) | 1613 |
| BstV2I | GAAGAC | 3 cut(s) | 1019, 1248, 1271 |
| BstX2I | RGATCY | 2 cut(s) | 516, 1164 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1698 |
| BstYI | RGATCY | 2 cut(s) | 516, 1164 |
| Bsu36I | CCTNAGG | 1 cut(s) | 365 |
| BsuI | GTATCC | 3 cut(s) | 352, 873, 1548 |
| BsuRI | GGCC | 1 cut(s) | 537 |
| BtgI | CCRYGG | 1 cut(s) | 446 |
| BtgZI | GCGATG | 2 cut(s) | 107, 605 |
| BtsCI | GGATG | 4 cut(s) | 588, 740, 830, 1312 |
| Cac8I | GCNNGC | 3 cut(s) | 782, 1110, 1425 |
| CfoI | GCGC | 1 cut(s) | 786 |
| Cfr10I | RCCGGY | 1 cut(s) | 1385 |
| Cfr13I | GGNCC | 1 cut(s) | 1688 |
| Csp6I | GTAC | 2 cut(s) | 370, 754 |
| CviAII | CATG | 4 cut(s) | 481, 497, 1098, 1424 |
| CviQI | GTAC | 2 cut(s) | 370, 754 |
| DpnI | GATC | 4 cut(s) | 518, 1166, 1350, 1415 |
| DpnII | GATC | 4 cut(s) | 516, 1164, 1348, 1413 |
| DraI | TTTAAA | 2 cut(s) | 925, 1392 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 310 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 310 |
| EaeI | YGGCCR | 1 cut(s) | 535 |
| Eam1104I | CTCTTC | 2 cut(s) | 112, 1211 |
| EarI | CTCTTC | 2 cut(s) | 112, 1211 |
| Eco130I | CCWWGG | 1 cut(s) | 345 |
| Eco47I | GGWCC | 1 cut(s) | 1688 |
| Eco57I | CTGAAG | 2 cut(s) | 46, 1704 |
| Eco81I | CCTNAGG | 1 cut(s) | 365 |
| Eco88I | CYCGRG | 1 cut(s) | 1246 |
| EcoRI | GAATTC | 2 cut(s) | 283, 789 |
| EcoT14I | CCWWGG | 1 cut(s) | 345 |
| ErhI | CCWWGG | 1 cut(s) | 345 |
| Esp3I | CGTCTC | 2 cut(s) | 20, 257 |
| FaeI | CATG | 4 cut(s) | 484, 500, 1101, 1427 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 918, 950 |
| FatI | CATG | 4 cut(s) | 480, 496, 1097, 1423 |
| FauI | CCCGC | 2 cut(s) | 528, 922 |
| FauNDI | CATATG | 1 cut(s) | 1080 |
| FblI | GTMKAC | 1 cut(s) | 302 |
| Fnu4HI | GCNGC | 1 cut(s) | 1602 |
| FokI | GGATG | 4 cut(s) | 595, 747, 837, 1319 |
| Fsp4HI | GCNGC | 1 cut(s) | 1602 |
| FspBI | CTAG | 4 cut(s) | 266, 654, 1116, 1286 |
| GlaI | GCGC | 1 cut(s) | 785 |
| GluI | GCNGC | 1 cut(s) | 1602 |
| GsuI | CTGGAG | 1 cut(s) | 815 |
| HaeIII | GGCC | 1 cut(s) | 537 |
| HapII | CCGG | 5 cut(s) | 766, 888, 1386, 1526, 1651 |
| HhaI | GCGC | 1 cut(s) | 786 |
| Hin1II | CATG | 4 cut(s) | 484, 500, 1101, 1427 |
| Hin6I | GCGC | 1 cut(s) | 784 |
| HinP1I | GCGC | 1 cut(s) | 784 |
| HincII | GTYRAC | 1 cut(s) | 303 |
| HindII | GTYRAC | 1 cut(s) | 303 |
| HinfI | GANTC | 5 cut(s) | 575, 1075, 1244, 1508, 1566 |
| HpaII | CCGG | 5 cut(s) | 766, 888, 1386, 1526, 1651 |
| HphI | GGTGA | 3 cut(s) | 1327, 1611, 1655 |
| Hpy166II | GTNNAC | 2 cut(s) | 303, 1678 |
| Hpy8I | GTNNAC | 2 cut(s) | 303, 1678 |
| HpyAV | CCTTC | 4 cut(s) | 7, 875, 1312, 1679 |
| HpyCH4III | ACNGT | 5 cut(s) | 132, 161, 396, 637, 1332 |
| HpyCH4IV | ACGT | 4 cut(s) | 18, 437, 860, 1016 |
| HpyCH4V | TGCA | 3 cut(s) | 507, 1549, 1601 |
| HpySE526I | ACGT | 4 cut(s) | 18, 437, 860, 1016 |
| Hsp92II | CATG | 4 cut(s) | 484, 500, 1101, 1427 |
| HspAI | GCGC | 1 cut(s) | 784 |
| Kpn2I | TCCGGA | 1 cut(s) | 887 |
| Kzo9I | GATC | 4 cut(s) | 516, 1164, 1348, 1413 |
| LmnI | GCTCC | 3 cut(s) | 890, 1084, 1432 |
| Lsp1109I | GCAGC | 1 cut(s) | 1613 |
| LweI | GCATC | 3 cut(s) | 676, 1588, 1636 |
| MaeI | CTAG | 4 cut(s) | 266, 654, 1116, 1286 |
| MaeII | ACGT | 4 cut(s) | 18, 437, 860, 1016 |
| MaeIII | GTNAC | 6 cut(s) | 19, 236, 649, 723, 1405, 1617 |
| MalI | GATC | 4 cut(s) | 518, 1166, 1350, 1415 |
| MboI | GATC | 4 cut(s) | 516, 1164, 1348, 1413 |
| MfeI | CAATTG | 1 cut(s) | 1503 |
| MflI | RGATCY | 2 cut(s) | 516, 1164 |
| MluCI | AATT | 6 cut(s) | 77, 283, 613, 789, 896, 1503 |
| MlyI | GAGTC | 2 cut(s) | 1084, 1238 |
| MmeI | TCCRAC | 1 cut(s) | 999 |
| MnlI | CCTC | 9 cut(s) | 192, 826, 1242, 1242, 1275, 1331, 1335, 1545, 1581 |
| MroI | TCCGGA | 1 cut(s) | 887 |
| MroXI | GAANNNNTTC | 1 cut(s) | 438 |
| MseI | TTAA | 7 cut(s) | 642, 924, 1143, 1169, 1391, 1440, 1481 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1534 |
| MspI | CCGG | 5 cut(s) | 766, 888, 1386, 1526, 1651 |
| MspR9I | CCNGG | 2 cut(s) | 1526, 1651 |
| MssI | GTTTAAAC | 1 cut(s) | 1392 |
| MunI | CAATTG | 1 cut(s) | 1503 |
| MvnI | CGCG | 1 cut(s) | 523 |
| NciI | CCSGG | 2 cut(s) | 1526, 1651 |
| NdeI | CATATG | 1 cut(s) | 1080 |
| NdeII | GATC | 4 cut(s) | 516, 1164, 1348, 1413 |
| NlaIII | CATG | 4 cut(s) | 484, 500, 1101, 1427 |
| NlaIV | GGNNCC | 3 cut(s) | 518, 886, 1523 |
| NmuCI | GTSAC | 1 cut(s) | 1617 |
| NspI | RCATGY | 1 cut(s) | 1427 |
| PaeI | GCATGC | 1 cut(s) | 1427 |
| PaeR7I | CTCGAG | 1 cut(s) | 1246 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1244 |
| PdmI | GAANNNNTTC | 1 cut(s) | 438 |
| PfeI | GAWTC | 3 cut(s) | 575, 1508, 1566 |
| PkrI | GCNGC | 1 cut(s) | 1603 |
| PleI | GAGTC | 2 cut(s) | 1083, 1238 |
| PmeI | GTTTAAAC | 1 cut(s) | 1392 |
| PpsI | GAGTC | 2 cut(s) | 1083, 1238 |
| Psp1406I | AACGTT | 1 cut(s) | 437 |
| PspN4I | GGNNCC | 3 cut(s) | 518, 886, 1523 |
| PspPI | GGNCC | 1 cut(s) | 1688 |
| PspXI | VCTCGAGB | 1 cut(s) | 1246 |
| PsuI | RGATCY | 2 cut(s) | 516, 1164 |
| RsaI | GTAC | 2 cut(s) | 371, 755 |
| RsaNI | GTAC | 2 cut(s) | 370, 754 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1534 |
| SalI | GTCGAC | 1 cut(s) | 301 |
| SaqAI | TTAA | 7 cut(s) | 642, 924, 1143, 1169, 1391, 1440, 1481 |
| SatI | GCNGC | 1 cut(s) | 1602 |
| Sau3AI | GATC | 4 cut(s) | 516, 1164, 1348, 1413 |
| Sau96I | GGNCC | 1 cut(s) | 1688 |
| SchI | GAGTC | 2 cut(s) | 1084, 1238 |
| ScrFI | CCNGG | 2 cut(s) | 1526, 1651 |
| SfaNI | GCATC | 3 cut(s) | 676, 1588, 1636 |
| SfcI | CTRYAG | 3 cut(s) | 633, 702, 1355 |
| Sfr274I | CTCGAG | 1 cut(s) | 1246 |
| SinI | GGWCC | 1 cut(s) | 1688 |
| SlaI | CTCGAG | 1 cut(s) | 1246 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1534 |
| SmlI | CTYRAG | 1 cut(s) | 1246 |
| SmoI | CTYRAG | 1 cut(s) | 1246 |
| SpeI | ACTAGT | 1 cut(s) | 653 |
| SphI | GCATGC | 1 cut(s) | 1427 |
| Sse9I | AATT | 6 cut(s) | 77, 283, 613, 789, 896, 1503 |
| SsiI | CCGC | 4 cut(s) | 521, 751, 929, 1641 |
| SspI | AATATT | 1 cut(s) | 1006 |
| SspMI | CTAG | 4 cut(s) | 266, 654, 1116, 1286 |
| StyD4I | CCNGG | 2 cut(s) | 1524, 1649 |
| StyI | CCWWGG | 1 cut(s) | 345 |
| TaaI | ACNGT | 5 cut(s) | 132, 161, 396, 637, 1332 |
| TaiI | ACGT | 4 cut(s) | 21, 440, 863, 1019 |
| TaqI | TCGA | 6 cut(s) | 72, 302, 402, 879, 1247, 1336 |
| TasI | AATT | 6 cut(s) | 77, 283, 613, 789, 896, 1503 |
| TfiI | GAWTC | 3 cut(s) | 575, 1508, 1566 |
| Tru1I | TTAA | 7 cut(s) | 642, 924, 1143, 1169, 1391, 1440, 1481 |
| Tru9I | TTAA | 7 cut(s) | 642, 924, 1143, 1169, 1391, 1440, 1481 |
| TseFI | GTSAC | 1 cut(s) | 1617 |
| TseI | GCWGC | 1 cut(s) | 1601 |
| Tsp45I | GTSAC | 1 cut(s) | 1617 |
| TspDTI | ATGAA | 6 cut(s) | 17, 113, 485, 588, 608, 1086 |
| TspGWI | ACGGA | 1 cut(s) | 463 |
| VpaK11BI | GGWCC | 1 cut(s) | 1688 |
| XapI | RAATTY | 4 cut(s) | 283, 613, 789, 896 |
| XceI | RCATGY | 1 cut(s) | 1427 |
| XhoI | CTCGAG | 1 cut(s) | 1246 |
| XmiI | GTMKAC | 1 cut(s) | 302 |
| XmnI | GAANNNNTTC | 1 cut(s) | 438 |
| XspI | CTAG | 4 cut(s) | 266, 654, 1116, 1286 |