Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0021878

Physical Location & Seq

Genomic Coordinates Reverse (-)

1999077 .. 2001049

Gene Structure 1973 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G06540.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1869 bp

ATGAGTAACATTGTGCTCAACACACTTCGATTCAAACACCCGAAGCTTGCCTTGCTCCAATCCTGCTCTTCCTTTTCCGACCTCAAGATCATACATGGCTTTCTCTTACGAACCCATCTCATCTCCGACGTCTTCGTTGCCAGTCGTCTCCTCGCTCTCTGCGTTGACGACTCCACCTTCAACAAACCAACCAATCTCTTGGGATATGCATACGGAATCTTCTCTCAGATTCAAAACCCTAATCTTTTCGTCTTCAATCTACTCATTCGCTGCTTCTCCACTGGTGCAGAGCCTAGTAAGGCTTTTGGGTTCTATACCCAGATGTTGAAATCTCGGATTTGGCCAGATAACATCACGTTTCCGTTTCTGATTAAGGCGTCTAGTGAGATGGAGTGTGTTCTAGTGGGAGAGCAAACGCATTCACAGATTGTTAGATTCGGATTTCAGAATGATGTTTATGTAGAGAATTCGCTTGTTCATATGTACGCTAATTGTGGGTTCATCGCTGCTGCTGGTAGAATCTTTGGGCAAATGGGGTTTCGAGATGTTGTTTCATGGACTTCTATGGTGGCTGGGTATTGTAAATGCGGGATGGTTGAGAATGCACGAGAGATGTTCGATGAAATGCCTCACAGAAATTTGTTTACTTGGAGTATTATGATTAATGGGTATGCGAAGAACAACTGTTTTGAGAAAGCCATTGACTTGTTTGAATTCATGAAAAGGGAAGGAGTTGTCGCGAATGAGACGGTTATGGTGAGTGTGATTTCGTCTTGTGCTCATTTGGGTGCACTTGAGTTTGGAGAAAGAGCATATGAGTATGTGGTTAAGAGTCACATGACTGTGAATCTTATTCTTGGGACAGCTCTTGTGGATATGTTTTGGAGGTGTGGGGATATCGAGAAAGCAATTCATGTATTTGAGGGATTGCCTGAGACGGATAGCTTGAGCTGGAGTTCAATAATCAAAGGTCTTGCAGTGCATGGGCATGCTCACAAGGCAATGCATTACTTCTCCCAAATGATTAGTTTAGGGTTTATTCCAAGGGATGTTACATTCACAGCGGTTCTTTCAGCTTGCAGCCACGGTGGATTAGTTGAAAAAGGGTTAGAGATATATGAGAACATGAAAAAGGATCATGGGATCGAGCCTAGACTCGAGCATTATGGTTGCATTGTTGATATGCTTGGTCGTGCTGGGAAATTAGCCGAAGCGGAGAACTTTATCCTTAAAATGCATGTGAAGCCAAACGCTCCTATATTGGGAGCATTGCTTGGAGCATGTAAGATTTATAAGAACACCGAGGTTGCAGAGAGAGTAGGAAACATGTTGATAAAGGTGAAACCAGAACATAGCGGTTACTATGTCTTACTGTCAAATATATACGCGTGTGCAGGACAATGGGATAAGATAGAGAGCTTGAGAGACATGATGAAGGAGAAGCTTGTTAAGAAACCACCAGGGTGGAGCTTAATAGAGATTGATGGGAAAATAAACAAGTTCACAATGGGAGATGATCAGAAGCATCCTGAAATGGGTAAGATCAGAAGGAAGTGGGAAGAGATCTTGGGGAAGATAAGATTGATAGGGTATAAAGGGAACACAGGTGATGCGTTTTTCGATGTAGACGAGGAGGAGAAGGAGAGTTCGATTCATATGCATAGTGAGAAACTTGCAATTGCATATGGTATGATGAAGACTAAGCCTGGTACAACCATTAGGATAGTGAAGAACTTGAGGGTATGTGAAGATTGTCATACAGTAACAAAGCTTATCTCTGAGGTTTATGGTAGAGAGTTAATTGTAAGAGACCGCAACAGATTTCATCATTTTAGAAATGGAGTATGTTCCTGCAGAGATTATTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR

Protein Analysis

622

Amino Acids

70.49

Weight (kDa)

8.17

Isoelectric Point (pI)

34.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	80 - 126	1e-05	PPR repeat family
PPR_2	PF13041	181 - 214	7.5e-08	PPR repeat family
PPR_1	PF12854	181 - 209	7e-09	PPR repeat
PPR	PF01535	184 - 213	6e-09	PPR repeat
PPR_2	PF13041	213 - 260	2.5e-09	PPR repeat family
PPR	PF01535	215 - 245	1.9e-09	PPR repeat
E_motif	PF20431	431 - 493	2.6e-15	E motif
DYW_deaminase	PF14432	530 - 622	3.6e-40	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Publication-ready

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Orthologous Genes (Group: OG0021878)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G06540
pyrus_communis	pycom02g24860
rosa_rugosa	Rorug05G0571600
rosa_samantha	Rh2CG357000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1293
AatII	GACGTC	1 cut(s)	132
AccI	GTMKAC	1 cut(s)	1626
AccII	CGCG	2 cut(s)	740, 1388
AciI	CCGC	5 cut(s)	588, 1064, 1214, 1356, 1813
AclWI	GGATC	2 cut(s)	1143, 1151
AcoI	YGGCCR	1 cut(s)	341
AcsI	RAATTY	3 cut(s)	466, 637, 713
AcyI	GRCGYC	2 cut(s)	129, 377
AfaI	GTAC	2 cut(s)	485, 1711
AfiI	CCNNNNNNNGG	2 cut(s)	1262, 1535
AflIII	ACRYGT	2 cut(s)	1326, 1386
AgsI	TTSAA	8 cut(s)	34, 181, 233, 256, 328, 713, 960, 1100
AjnI	CCWGG	2 cut(s)	1459, 1705
AleI	CACNNNNGTG	1 cut(s)	1462
AluBI	AGCT	9 cut(s)	46, 866, 945, 951, 1076, 1419, 1444, 1470, 1771
AluI	AGCT	9 cut(s)	46, 866, 945, 951, 1076, 1419, 1444, 1470, 1771
Alw21I	GWGCWC	3 cut(s)	18, 781, 793
Alw26I	GTCTC	5 cut(s)	152, 740, 929, 1419, 1803
Alw44I	GTGCAC	1 cut(s)	789
AlwI	GGATC	2 cut(s)	1143, 1151
Ama87I	CYCGRG	1 cut(s)	1157
AoxI	GGCC	1 cut(s)	341
ApaLI	GTGCAC	1 cut(s)	789
ApeKI	GCWGC	4 cut(s)	270, 506, 509, 1080
ApoI	RAATTY	3 cut(s)	466, 637, 713
AseI	ATTAAT	1 cut(s)	663
AsuHPI	GGTGA	3 cut(s)	769, 1351, 1619
AvaI	CYCGRG	1 cut(s)	1157
BaeGI	GKGCMC	1 cut(s)	793
BalI	TGGCCA	1 cut(s)	343
BauI	CACGAG	1 cut(s)	606
BbsI	GAAGAC	3 cut(s)	124, 244, 1703
Bbv12I	GWGCWC	3 cut(s)	18, 781, 793
BbvI	GCAGC	4 cut(s)	257, 493, 496, 1092
BccI	CCATC	4 cut(s)	123, 382, 586, 1478
BcgI	CGANNNNNNTGC	2 cut(s)	1639, 1673
BciT130I	CCWGG	2 cut(s)	1461, 1707
BclI	TGATCA	1 cut(s)	1516
BcoDI	GTCTC	5 cut(s)	152, 740, 929, 1419, 1803
BfaI	CTAG	4 cut(s)	294, 381, 401, 1152
BfmI	CTRYAG	1 cut(s)	1852
BglII	AGATCT	1 cut(s)	1563
BisI	GCNGC	4 cut(s)	271, 507, 510, 1081
BlsI	GCNGC	4 cut(s)	272, 508, 511, 1082
Bme1390I	CCNGG	2 cut(s)	1461, 1707
BmeT110I	CYCGRG	1 cut(s)	1157
BmrFI	CCNGG	2 cut(s)	1461, 1707
BmsI	GCATC	2 cut(s)	1534, 1600
BpiI	GAAGAC	3 cut(s)	124, 244, 1703
BpmI	CTGGAG	1 cut(s)	973
BpuEI	CTTGAG	5 cut(s)	68, 815, 967, 1441, 1756
BsaHI	GRCGYC	2 cut(s)	129, 377
BsaI	GGTCTC	1 cut(s)	1803
BsaJI	CCNNGG	4 cut(s)	1043, 1084, 1302, 1460
Bsc4I	CCNNNNNNNGG	2 cut(s)	1262, 1535
Bse1I	ACTGG	2 cut(s)	141, 286
Bse3DI	GCAATG	2 cut(s)	1008, 1268
BseBI	CCWGG	2 cut(s)	1461, 1707
BseDI	CCNNGG	4 cut(s)	1043, 1084, 1302, 1460
BseGI	GGATG	3 cut(s)	597, 1054, 1525
BseLI	CCNNNNNNNGG	2 cut(s)	1262, 1535
BseMI	GCAATG	2 cut(s)	1008, 1268
BseMII	CTCAG	3 cut(s)	239, 924, 1770
BseNI	ACTGG	2 cut(s)	141, 286
BseRI	GAGGAG	3 cut(s)	140, 1646, 1649
BseSI	GKGCMC	1 cut(s)	793
BseXI	GCAGC	4 cut(s)	257, 493, 496, 1092
BseYI	CCCAGC	2 cut(s)	572, 1196
BsgI	GTGCAG	2 cut(s)	306, 1413
Bsh1236I	CGCG	2 cut(s)	740, 1388
BshFI	GGCC	1 cut(s)	343
BsiHKAI	GWGCWC	3 cut(s)	18, 781, 793
BsiHKCI	CYCGRG	1 cut(s)	1157
BslFI	GGGAC	1 cut(s)	874
BslI	CCNNNNNNNGG	2 cut(s)	1262, 1535
BsmAI	GTCTC	5 cut(s)	152, 740, 929, 1419, 1803
BsmBI	CGTCTC	3 cut(s)	152, 740, 929
BsmFI	GGGAC	1 cut(s)	874
BsmI	GAATGC	2 cut(s)	418, 607
BsnI	GGCC	1 cut(s)	343
Bso31I	GGTCTC	1 cut(s)	1803
BsoBI	CYCGRG	1 cut(s)	1157
Bsp1286I	GDGCHC	3 cut(s)	18, 781, 793
Bsp143I	GATC	6 cut(s)	87, 1135, 1143, 1516, 1542, 1563
Bsp68I	TCGCGA	1 cut(s)	740
BspACI	CCGC	5 cut(s)	588, 1064, 1214, 1356, 1813
BspANI	GGCC	1 cut(s)	343
BspCNI	CTCAG	3 cut(s)	238, 925, 1771
BspFNI	CGCG	2 cut(s)	740, 1388
BspHI	TCATGA	1 cut(s)	717
BspMAI	CTGCAG	1 cut(s)	1856
BspPI	GGATC	2 cut(s)	1143, 1151
BspQI	GCTCTTC	1 cut(s)	73
BspTNI	GGTCTC	1 cut(s)	1803
BsrDI	GCAATG	2 cut(s)	1008, 1268
BsrI	ACTGG	2 cut(s)	141, 286
BssECI	CCNNGG	4 cut(s)	1043, 1084, 1302, 1460
BssMI	GATC	6 cut(s)	87, 1135, 1143, 1516, 1542, 1563
BssNI	GRCGYC	2 cut(s)	129, 377
BssSI	CACGAG	1 cut(s)	606
BssT1I	CCWWGG	1 cut(s)	1043
Bst2BI	CACGAG	1 cut(s)	606
Bst2UI	CCWGG	2 cut(s)	1461, 1707
Bst4CI	ACNGT	6 cut(s)	686, 751, 844, 1088, 1374, 1762
Bst6I	CTCTTC	2 cut(s)	73, 1554
BstACI	GRCGYC	2 cut(s)	129, 377
BstC8I	GCNNGC	3 cut(s)	48, 990, 1078
BstDEI	CTNAG	4 cut(s)	225, 933, 1701, 1779
BstDSI	CCRYGG	1 cut(s)	1084
BstF5I	GGATG	3 cut(s)	597, 1054, 1525
BstFNI	CGCG	2 cut(s)	740, 1388
BstKTI	GATC	6 cut(s)	90, 1138, 1146, 1519, 1545, 1566
BstMAI	GTCTC	5 cut(s)	152, 740, 929, 1419, 1803
BstMBI	GATC	6 cut(s)	87, 1135, 1143, 1516, 1542, 1563
BstMWI	GCNNNNNNNGC	3 cut(s)	52, 998, 1243
BstNI	CCWGG	2 cut(s)	1461, 1707
BstNSI	RCATGY	4 cut(s)	992, 1241, 1284, 1330
BstSCI	CCNGG	2 cut(s)	1459, 1705
BstSFI	CTRYAG	1 cut(s)	1852
BstSLI	GKGCMC	1 cut(s)	793
BstUI	CGCG	2 cut(s)	740, 1388
BstV1I	GCAGC	4 cut(s)	257, 493, 496, 1092
BstV2I	GAAGAC	3 cut(s)	124, 244, 1703
BstX2I	RGATCY	1 cut(s)	1563
BstXI	CCANNNNNNTGG	2 cut(s)	199, 1464
BstYI	RGATCY	1 cut(s)	1563
BsuRI	GGCC	1 cut(s)	343
BtgI	CCRYGG	1 cut(s)	1084
BtgZI	GCGATG	1 cut(s)	487
BtsCI	GGATG	3 cut(s)	597, 1054, 1525
BtsI	GCAGTG	1 cut(s)	984
BtsIMutI	CAGTG	2 cut(s)	279, 984
BtuMI	TCGCGA	1 cut(s)	740
Cac8I	GCNNGC	3 cut(s)	48, 990, 1078
CciI	TCATGA	1 cut(s)	717
CseI	GACGC	1 cut(s)	366
Csp6I	GTAC	2 cut(s)	484, 1710
CviQI	GTAC	2 cut(s)	484, 1710
DdeI	CTNAG	4 cut(s)	225, 933, 1701, 1779
DpnI	GATC	6 cut(s)	89, 1137, 1145, 1518, 1544, 1565
DpnII	GATC	6 cut(s)	87, 1135, 1143, 1516, 1542, 1563
EaeI	YGGCCR	1 cut(s)	341
Eam1104I	CTCTTC	2 cut(s)	73, 1554
EarI	CTCTTC	2 cut(s)	73, 1554
Eco130I	CCWWGG	1 cut(s)	1043
Eco31I	GGTCTC	1 cut(s)	1803
Eco32I	GATATC	1 cut(s)	898
Eco88I	CYCGRG	1 cut(s)	1157
EcoRI	GAATTC	2 cut(s)	466, 713
EcoRII	CCWGG	2 cut(s)	1459, 1705
EcoRV	GATATC	1 cut(s)	898
EcoT14I	CCWWGG	1 cut(s)	1043
EcoT22I	ATGCAT	4 cut(s)	211, 1008, 1239, 1662
ErhI	CCWWGG	1 cut(s)	1043
Esp3I	CGTCTC	3 cut(s)	152, 740, 929
FalI	AAGNNNNNCTT	2 cut(s)	35, 67
FaqI	GGGAC	1 cut(s)	874
FauI	CCCGC	1 cut(s)	581
FauNDI	CATATG	4 cut(s)	480, 814, 1656, 1684
FbaI	TGATCA	1 cut(s)	1516
FblI	GTMKAC	1 cut(s)	1626
Fnu4HI	GCNGC	4 cut(s)	271, 507, 510, 1081
FokI	GGATG	3 cut(s)	604, 1061, 1512
Fsp4HI	GCNGC	4 cut(s)	271, 507, 510, 1081
FspBI	CTAG	4 cut(s)	294, 381, 401, 1152
GluI	GCNGC	4 cut(s)	271, 507, 510, 1081
GsaI	CCCAGC	2 cut(s)	576, 1200
GsuI	CTGGAG	1 cut(s)	973
HaeIII	GGCC	1 cut(s)	343
HgaI	GACGC	1 cut(s)	366
Hin1I	GRCGYC	2 cut(s)	129, 377
HincII	GTYRAC	1 cut(s)	166
HindII	GTYRAC	1 cut(s)	166
HindIII	AAGCTT	3 cut(s)	44, 1442, 1769
HphI	GGTGA	3 cut(s)	769, 1351, 1619
Hpy166II	GTNNAC	5 cut(s)	166, 645, 791, 1503, 1627
Hpy188III	TCNNGA	6 cut(s)	85, 542, 718, 739, 901, 1529
Hpy8I	GTNNAC	5 cut(s)	166, 645, 791, 1503, 1627
Hpy99I	CGWCG	1 cut(s)	131
HpyAV	CCTTC	5 cut(s)	187, 722, 1429, 1542, 1633
HpyCH4III	ACNGT	6 cut(s)	686, 751, 844, 1088, 1374, 1762
HpyCH4IV	ACGT	2 cut(s)	129, 356
HpyF10VI	GCNNNNNNNGC	3 cut(s)	52, 998, 1243
HpyF3I	CTNAG	4 cut(s)	225, 933, 1701, 1779
HpySE526I	ACGT	2 cut(s)	129, 356
Hsp92I	GRCGYC	2 cut(s)	129, 377
Ksp22I	TGATCA	1 cut(s)	1516
Kzo9I	GATC	6 cut(s)	87, 1135, 1143, 1516, 1542, 1563
LguI	GCTCTTC	1 cut(s)	73
LmnI	GCTCC	5 cut(s)	60, 1258, 1265, 1277, 1467
Lsp1109I	GCAGC	4 cut(s)	257, 493, 496, 1092
LweI	GCATC	2 cut(s)	1534, 1600
MaeI	CTAG	4 cut(s)	294, 381, 401, 1152
MaeII	ACGT	2 cut(s)	129, 356
MaeIII	GTNAC	5 cut(s)	5, 833, 1051, 1358, 1762
MalI	GATC	6 cut(s)	89, 1137, 1145, 1518, 1544, 1565
MboI	GATC	6 cut(s)	87, 1135, 1143, 1516, 1542, 1563
MfeI	CAATTG	1 cut(s)	1677
MflI	RGATCY	1 cut(s)	1563
MhlI	GDGCHC	3 cut(s)	18, 781, 793
MlsI	TGGCCA	1 cut(s)	343
MluCI	AATT	8 cut(s)	466, 490, 637, 713, 909, 1202, 1677, 1800
MluI	ACGCGT	1 cut(s)	1386
MluNI	TGGCCA	1 cut(s)	343
MlyI	GAGTC	3 cut(s)	164, 841, 1149
MmeI	TCCRAC	2 cut(s)	102, 150
Mox20I	TGGCCA	1 cut(s)	343
Mph1103I	ATGCAT	4 cut(s)	211, 1008, 1239, 1662
MscI	TGGCCA	1 cut(s)	343
MseI	TTAA	7 cut(s)	372, 663, 828, 1230, 1449, 1472, 1799
MslI	CAYNNNNRTG	4 cut(s)	786, 842, 987, 1462
Msp20I	TGGCCA	1 cut(s)	343
MspA1I	CMGCKG	1 cut(s)	1064
MspR9I	CCNGG	2 cut(s)	1461, 1707
MunI	CAATTG	1 cut(s)	1677
Mva1269I	GAATGC	2 cut(s)	418, 607
MvaI	CCWGG	2 cut(s)	1461, 1707
MvnI	CGCG	2 cut(s)	740, 1388
MwoI	GCNNNNNNNGC	3 cut(s)	52, 998, 1243
NdeI	CATATG	4 cut(s)	480, 814, 1656, 1684
NdeII	GATC	6 cut(s)	87, 1135, 1143, 1516, 1542, 1563
NmuCI	GTSAC	1 cut(s)	833
NruI	TCGCGA	1 cut(s)	740
NsiI	ATGCAT	4 cut(s)	211, 1008, 1239, 1662
NspI	RCATGY	4 cut(s)	992, 1241, 1284, 1330
OliI	CACNNNNGTG	1 cut(s)	1462
PaeI	GCATGC	1 cut(s)	992
PaeR7I	CTCGAG	1 cut(s)	1157
PagI	TCATGA	1 cut(s)	717
PciI	ACATGT	1 cut(s)	1326
PciSI	GCTCTTC	1 cut(s)	73
PcsI	WCGNNNNNNNCGW	2 cut(s)	159, 1626
PctI	GAATGC	2 cut(s)	418, 607
PfeI	GAWTC	7 cut(s)	30, 216, 229, 435, 519, 847, 1651
PkrI	GCNGC	4 cut(s)	272, 508, 511, 1082
PleI	GAGTC	3 cut(s)	164, 840, 1149
PpsI	GAGTC	3 cut(s)	164, 840, 1149
PscI	ACATGT	1 cut(s)	1326
PshBI	ATTAAT	1 cut(s)	663
PsiI	TTATAA	1 cut(s)	1293
Psp6I	CCWGG	2 cut(s)	1459, 1705
PspFI	CCCAGC	2 cut(s)	572, 1196
PspGI	CCWGG	2 cut(s)	1459, 1705
PspXI	VCTCGAGB	1 cut(s)	1157
PstI	CTGCAG	1 cut(s)	1856
PsuI	RGATCY	1 cut(s)	1563
RruI	TCGCGA	1 cut(s)	740
RsaI	GTAC	2 cut(s)	485, 1711
RsaNI	GTAC	2 cut(s)	484, 1710
RseI	CAYNNNNRTG	4 cut(s)	786, 842, 987, 1462
SapI	GCTCTTC	1 cut(s)	73
SaqAI	TTAA	7 cut(s)	372, 663, 828, 1230, 1449, 1472, 1799
SatI	GCNGC	4 cut(s)	271, 507, 510, 1081
Sau3AI	GATC	6 cut(s)	87, 1135, 1143, 1516, 1542, 1563
SchI	GAGTC	3 cut(s)	164, 841, 1149
ScrFI	CCNGG	2 cut(s)	1461, 1707
SduI	GDGCHC	3 cut(s)	18, 781, 793
SfaNI	GCATC	2 cut(s)	1534, 1600
SfcI	CTRYAG	1 cut(s)	1852
Sfr274I	CTCGAG	1 cut(s)	1157
SlaI	CTCGAG	1 cut(s)	1157
SmiMI	CAYNNNNRTG	4 cut(s)	786, 842, 987, 1462
SmlI	CTYRAG	6 cut(s)	83, 794, 946, 1157, 1420, 1735
SmoI	CTYRAG	6 cut(s)	83, 794, 946, 1157, 1420, 1735
SphI	GCATGC	1 cut(s)	992
Sse9I	AATT	8 cut(s)	466, 490, 637, 713, 909, 1202, 1677, 1800
SsiI	CCGC	5 cut(s)	588, 1064, 1214, 1356, 1813
SspMI	CTAG	4 cut(s)	294, 381, 401, 1152
StyD4I	CCNGG	2 cut(s)	1459, 1705
StyI	CCWWGG	1 cut(s)	1043
TaaI	ACNGT	6 cut(s)	686, 751, 844, 1088, 1374, 1762
TaiI	ACGT	2 cut(s)	132, 359
TaqI	TCGA	8 cut(s)	28, 541, 618, 900, 1146, 1158, 1620, 1649
TasI	AATT	8 cut(s)	466, 490, 637, 713, 909, 1202, 1677, 1800
TfiI	GAWTC	7 cut(s)	30, 216, 229, 435, 519, 847, 1651
Tru1I	TTAA	7 cut(s)	372, 663, 828, 1230, 1449, 1472, 1799
Tru9I	TTAA	7 cut(s)	372, 663, 828, 1230, 1449, 1472, 1799
TscAI	CASTG	2 cut(s)	286, 984
TseFI	GTSAC	1 cut(s)	833
TseI	GCWGC	4 cut(s)	270, 506, 509, 1080
Tsp45I	GTSAC	1 cut(s)	833
TspGWI	ACGGA	3 cut(s)	228, 351, 953
TspRI	CASTG	2 cut(s)	286, 984
VneI	GTGCAC	1 cut(s)	789
VspI	ATTAAT	1 cut(s)	663
XapI	RAATTY	3 cut(s)	466, 637, 713
XceI	RCATGY	4 cut(s)	992, 1241, 1284, 1330
XhoI	CTCGAG	1 cut(s)	1157
XmiI	GTMKAC	1 cut(s)	1626
XspI	CTAG	4 cut(s)	294, 381, 401, 1152
ZraI	GACGTC	1 cut(s)	130
Zsp2I	ATGCAT	4 cut(s)	211, 1008, 1239, 1662

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.