AT5G10190

Sugar (and other) transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0012873
Physical Location & Seq
Forward (+)
3198898 .. 3201365
2468 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G10190.3

Sequence Viewer

Length: 1467 bp
ATGAAGTCGGAGACTTTAACATTAGTTCTGGTGTATCTCGCCGGAATCATGGAGAGAGCCGATGAGTCTCTGCTTCCAGGAGTTTACAAAGAAGTTGGAGATGCTCTACACGTGGATCCCACAGCTCTTGGAACATTAACTCTGTTCCGCTCTATTGTTCAGTCTTCTTGTTACCCTTTAGCCGCTTACTTGTCTTCTAGACATAACCGAGCTCACGTCATCGCTCTCGGTGCTTTCCTCTGGGCCACTGCCACTTTCCTCGTCGCCGTCTCCACTACTTTCTTCCAGGTGGCAGTATCAAGAGGCTTGAACGGGATAGGGCTAGCCATTGTGACACCCGCGATTCAGTCCCTAGTCGCTGACTCAACTGATGACTATAACCGTGGGATGGCATTTGGGTGGTTAGGATTCACATCAAACATTGGTTCCATACTTGGCTATGTATGTTCCATCCTCTTTGCCTCAAAATCTTTCAATGGTGTCGCTGGATGGAGAATCGCTTTCCTTTTGGTAGCAGTCGTTAGCGTGATAGTAGGCATTTTGGTCCGTCTCTTCGCAACAGATCCTCACTACAGCGACAGAAAGATCACAAAACATGTCAAAGACAAACCTTTCTGGTCAGACATAAGAGATCTATTGAAAGAAGCTAAGATGGTGATAAAGATTCCGTCTTTCCAAATCTTTGTCGCTCAGGGAGTTTCGGGTTCTTTCCCTTGGTCAGCTTTGGCTTTTGCACCATTGTGGCTAGAACTCATTGGTTTCTCCCACAAAACAACCGCGGTTCTCGTGACTCTTTTCACCATTTCTTGCTCTCTTGGAGGTTTGTTTGGAGGATACATGGGAGATACTCTCGCCAAGAAGTTCCCAAATGGCGGTAGGATTTTCCTCTCTCAGGTAAGCTCTGGCTCGGCAATTCCTTTAGCTGCGATTTTGCTTATCGGATTACCTGATGATCCCTCCACGGCCTTTAGCCACGGTCTGGTTCTTGTCATCATGGGATTATGCATCTCATGGAACGGTGCAGCTACAAACGGTCCAATATTTGCAGAGATAGTTCCTGAGAGAGCACGAACGAGCATCTACGCGTTAGACAGATCATTCGAGTCGATTCTAGCTTCTTTTGCTCCTCCTATAGTAGGGATGCTTGCTCAGAACATCTATGGATATAAACCAATCCCGGAAGGATCCACAAGCTCGGTCAAGATTGATACAGATAGAGCGAACGCAGCATCGCTCGCTAAAGCATTATACACATCGATTGGGATCCCGATGGTGATCTGTTGCACAATCTACTCGTTCCTATATTGCACATACCCGAGGGACCGAGACAGAGCAAAAATGCAAGCCTTGATCGAGTCAGAGATGCAACAACTCAATGAAGAGGAAGATGAGATCGAAGTGAAGTGTTTTGGAGCTGAAGAACACGATGAGGCTTATTTGCTTAAGCAGCATCAGAATGAGAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MFS_1

Protein Analysis

488

Amino Acids

52.9

Weight (kDa)

6.01

Isoelectric Point (pI)

33.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 1 - 247 4.3e-18 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012873)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G10190 AT5G10190 AT5G10190
fragaria_vesca FvH4_1g21090 FvH4_1g21100
malus_domestica MD01G1027800.v1.1
prunus_persica Prupe.6G183300_v2.0.a1
pyrus_communis pycom01g05610
rosa_chinensis RchiOBHm_Chr2g0114881
rosa_laevigata RLG00000018122 RLG00000018130
rosa_multiflora Rmu_sc0002764.1_g000041
rosa_roxburghii Rroxscaffold_2G00130370
rosa_rugosa Rorug02G0191300
rosa_samantha Rh2AG249900 Rh2CG254300 Rh2DG258100
rosa_wichuraiana Rw2G019470

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 979
AccBSI CCGCTC 1 cut(s) 150
AccII CGCG 3 cut(s) 341, 779, 1085
AciI CCGC 6 cut(s) 148, 183, 339, 777, 779, 873
AclWI GGATC 8 cut(s) 110, 123, 557, 947, 1179, 1192, 1258, 1271
AcuI CTGAAG 1 cut(s) 1437
AcvI CACGTG 1 cut(s) 112
AfiI CCNNNNNNNGG 5 cut(s) 388, 872, 892, 979, 1136
AflII CTTAAG 1 cut(s) 1442
AflIII ACRYGT 3 cut(s) 109, 595, 1083
AgsI TTSAA 3 cut(s) 310, 475, 640
AjiI CACGTC 1 cut(s) 217
AjnI CCWGG 2 cut(s) 76, 285
AleI CACNNNNGTG 1 cut(s) 739
Alw21I GWGCWC 2 cut(s) 214, 1069
Alw26I GTCTC 5 cut(s) 5, 72, 274, 554, 1320
AlwI GGATC 8 cut(s) 110, 123, 557, 947, 1179, 1192, 1258, 1271
Ama87I CYCGRG 1 cut(s) 1315
AoxI GGCC 2 cut(s) 243, 963
ApeKI GCWGC 4 cut(s) 923, 1022, 1226, 1447
ArsI GACNNNNNNTTYG 2 cut(s) 1082, 1114
AspS9I GGNCC 4 cut(s) 243, 544, 1034, 1321
AsuC2I CCSGG 1 cut(s) 1178
AsuHPI GGTGA 3 cut(s) 667, 790, 1285
AsuNHI GCTAGC 1 cut(s) 322
AvaI CYCGRG 1 cut(s) 1315
AvaII GGWCC 3 cut(s) 544, 1034, 1321
BamHI GGATCC 3 cut(s) 115, 1184, 1263
BanII GRGCYC 1 cut(s) 214
BauI CACGAG 1 cut(s) 785
BbrPI CACGTG 1 cut(s) 112
BbsI GAAGAC 2 cut(s) 156, 186
Bbv12I GWGCWC 2 cut(s) 214, 1069
BbvI GCAGC 4 cut(s) 910, 1034, 1238, 1459
BccI CCATC 5 cut(s) 382, 458, 483, 646, 1264
BceAI ACGGC 2 cut(s) 251, 978
BciT130I CCWGG 2 cut(s) 78, 287
BciVI GTATCC 1 cut(s) 827
BcnI CCSGG 1 cut(s) 1178
BcoDI GTCTC 5 cut(s) 5, 72, 274, 554, 1320
BfaI CTAG 5 cut(s) 198, 323, 353, 746, 1112
BfmI CTRYAG 2 cut(s) 571, 1131
BfrI CTTAAG 1 cut(s) 1442
BfuI GTATCC 1 cut(s) 827
BglII AGATCT 1 cut(s) 631
BisI GCNGC 5 cut(s) 183, 924, 1023, 1227, 1448
BlsI GCNGC 5 cut(s) 184, 925, 1024, 1228, 1449
Bme1390I CCNGG 3 cut(s) 78, 287, 1178
Bme18I GGWCC 3 cut(s) 544, 1034, 1321
BmeT110I CYCGRG 1 cut(s) 1315
BmgBI CACGTC 1 cut(s) 217
BmgT120I GGNCC 4 cut(s) 243, 544, 1034, 1321
BmiI GGNNCC 5 cut(s) 117, 427, 1186, 1265, 1322
BmrFI CCNGG 3 cut(s) 78, 287, 1178
BmsI GCATC 7 cut(s) 91, 1014, 1086, 1131, 1238, 1353, 1459
BmtI GCTAGC 1 cut(s) 326
BpiI GAAGAC 2 cut(s) 156, 186
BplI GAGNNNNNCTC 2 cut(s) 834, 866
Bpu10I CCTNAGC 1 cut(s) 690
BpuMI CCSGG 1 cut(s) 1178
Bsa29I ATCGAT 1 cut(s) 1256
BsaAI YACGTR 1 cut(s) 112
BsaBI GATNNNNATC 3 cut(s) 412, 1262, 1274
BsaJI CCNNGG 6 cut(s) 382, 713, 777, 960, 973, 1316
Bsc4I CCNNNNNNNGG 5 cut(s) 388, 872, 892, 979, 1136
Bse8I GATNNNNATC 3 cut(s) 412, 1262, 1274
BseBI CCWGG 2 cut(s) 78, 287
BseCI ATCGAT 1 cut(s) 1256
BseDI CCNNGG 6 cut(s) 382, 713, 777, 960, 973, 1316
BseGI GGATG 4 cut(s) 393, 450, 494, 1146
BseJI GATNNNNATC 3 cut(s) 412, 1262, 1274
BseLI CCNNNNNNNGG 5 cut(s) 388, 872, 892, 979, 1136
BseMII CTCAG 4 cut(s) 704, 905, 1050, 1163
BseRI GAGGAG 1 cut(s) 1116
BseXI GCAGC 4 cut(s) 910, 1034, 1238, 1459
BsgI GTGCAG 1 cut(s) 1041
Bsh1236I CGCG 3 cut(s) 341, 779, 1085
BshFI GGCC 2 cut(s) 245, 965
BshVI ATCGAT 1 cut(s) 1256
BsiHKAI GWGCWC 2 cut(s) 214, 1069
BsiHKCI CYCGRG 1 cut(s) 1315
BsiSI CCGG 2 cut(s) 42, 1178
BslFI GGGAC 2 cut(s) 334, 1334
BslI CCNNNNNNNGG 5 cut(s) 388, 872, 892, 979, 1136
BsmAI GTCTC 5 cut(s) 5, 72, 274, 554, 1320
BsmBI CGTCTC 2 cut(s) 274, 554
BsmFI GGGAC 2 cut(s) 334, 1334
BsnI GGCC 2 cut(s) 245, 965
BsoBI CYCGRG 1 cut(s) 1315
Bsp1286I GDGCHC 2 cut(s) 214, 1069
BspACI CCGC 6 cut(s) 148, 183, 339, 777, 779, 873
BspANI GGCC 2 cut(s) 245, 965
BspCNI CTCAG 4 cut(s) 703, 904, 1051, 1162
BspDI ATCGAT 1 cut(s) 1256
BspFNI CGCG 3 cut(s) 341, 779, 1085
BspLI GGNNCC 5 cut(s) 117, 427, 1186, 1265, 1322
BspOI GCTAGC 1 cut(s) 326
BspPI GGATC 8 cut(s) 110, 123, 557, 947, 1179, 1192, 1258, 1271
BspTI CTTAAG 1 cut(s) 1442
BsrBI CCGCTC 1 cut(s) 150
BssECI CCNNGG 6 cut(s) 382, 713, 777, 960, 973, 1316
BssSI CACGAG 1 cut(s) 785
BssT1I CCWWGG 1 cut(s) 713
Bst2BI CACGAG 1 cut(s) 785
Bst2UI CCWGG 2 cut(s) 78, 287
Bst4CI ACNGT 4 cut(s) 383, 977, 1019, 1034
Bst6I CTCTTC 2 cut(s) 557, 1374
BstAFI CTTAAG 1 cut(s) 1442
BstBAI YACGTR 1 cut(s) 112
BstC8I GCNNGC 4 cut(s) 324, 1146, 1236, 1344
BstDEI CTNAG 5 cut(s) 648, 690, 891, 1059, 1149
BstDSI CCRYGG 4 cut(s) 382, 777, 960, 973
BstENI CCTNNNNNAGG 2 cut(s) 890, 1134
BstF5I GGATG 4 cut(s) 393, 450, 494, 1146
BstFNI CGCG 3 cut(s) 341, 779, 1085
BstMAI GTCTC 5 cut(s) 5, 72, 274, 554, 1320
BstMWI GCNNNNNNNGC 5 cut(s) 230, 1121, 1226, 1235, 1447
BstNI CCWGG 2 cut(s) 78, 287
BstNSI RCATGY 1 cut(s) 599
BstSCI CCNGG 3 cut(s) 76, 285, 1176
BstSFI CTRYAG 2 cut(s) 571, 1131
BstUI CGCG 3 cut(s) 341, 779, 1085
BstV1I GCAGC 4 cut(s) 910, 1034, 1238, 1459
BstV2I GAAGAC 2 cut(s) 156, 186
BstX2I RGATCY 5 cut(s) 115, 562, 631, 1184, 1263
BstYI RGATCY 5 cut(s) 115, 562, 631, 1184, 1263
Bsu15I ATCGAT 1 cut(s) 1256
BsuI GTATCC 1 cut(s) 827
BsuRI GGCC 2 cut(s) 245, 965
BsuTUI ATCGAT 1 cut(s) 1256
BtgI CCRYGG 4 cut(s) 382, 777, 960, 973
BtgZI GCGATG 2 cut(s) 205, 1215
BtrI CACGTC 1 cut(s) 217
BtsCI GGATG 4 cut(s) 393, 450, 494, 1146
BtsI GCAGTG 1 cut(s) 246
BtsIMutI CAGTG 1 cut(s) 246
Cac8I GCNNGC 4 cut(s) 324, 1146, 1236, 1344
Cfr13I GGNCC 4 cut(s) 243, 544, 1034, 1321
Cfr42I CCGCGG 1 cut(s) 780
ClaI ATCGAT 1 cut(s) 1256
CspCI CAANNNNNGTGG 2 cut(s) 109, 144
CviAII CATG 5 cut(s) 49, 596, 838, 994, 1011
DdeI CTNAG 5 cut(s) 648, 690, 891, 1059, 1149
Eam1104I CTCTTC 2 cut(s) 557, 1374
EarI CTCTTC 2 cut(s) 557, 1374
Ecl136II GAGCTC 1 cut(s) 212
Eco130I CCWWGG 1 cut(s) 713
Eco24I GRGCYC 1 cut(s) 214
Eco47I GGWCC 3 cut(s) 544, 1034, 1321
Eco53kI GAGCTC 1 cut(s) 212
Eco57I CTGAAG 1 cut(s) 1437
Eco72I CACGTG 1 cut(s) 112
Eco88I CYCGRG 1 cut(s) 1315
EcoICRI GAGCTC 1 cut(s) 212
EcoNI CCTNNNNNAGG 2 cut(s) 890, 1134
EcoRII CCWGG 2 cut(s) 76, 285
EcoT14I CCWWGG 1 cut(s) 713
EcoT22I ATGCAT 1 cut(s) 1007
EcoT38I GRGCYC 1 cut(s) 214
ErhI CCWWGG 1 cut(s) 713
Esp3I CGTCTC 2 cut(s) 274, 554
FaeI CATG 5 cut(s) 52, 599, 841, 997, 1014
FaqI GGGAC 2 cut(s) 334, 1334
FatI CATG 5 cut(s) 48, 595, 837, 993, 1010
FauI CCCGC 1 cut(s) 346
Fnu4HI GCNGC 5 cut(s) 183, 924, 1023, 1227, 1448
FokI GGATG 4 cut(s) 400, 437, 501, 1153
FriOI GRGCYC 1 cut(s) 214
Fsp4HI GCNGC 5 cut(s) 183, 924, 1023, 1227, 1448
FspBI CTAG 5 cut(s) 198, 323, 353, 746, 1112
GluI GCNGC 5 cut(s) 183, 924, 1023, 1227, 1448
HaeIII GGCC 2 cut(s) 245, 965
HapII CCGG 2 cut(s) 42, 1178
Hin1II CATG 5 cut(s) 52, 599, 841, 997, 1014
HpaII CCGG 2 cut(s) 42, 1178
HphI GGTGA 3 cut(s) 667, 790, 1285
Hpy166II GTNNAC 1 cut(s) 85
Hpy188I TCNGA 6 cut(s) 10, 622, 941, 1152, 1360, 1455
Hpy188III TCNNGA 6 cut(s) 198, 300, 787, 1058, 1201, 1267
Hpy8I GTNNAC 1 cut(s) 85
Hpy99I CGWCG 1 cut(s) 266
HpyAV CCTTC 1 cut(s) 1175
HpyCH4III ACNGT 4 cut(s) 383, 977, 1019, 1034
HpyCH4IV ACGT 2 cut(s) 111, 216
HpyCH4V TGCA 8 cut(s) 734, 1005, 1022, 1046, 1284, 1308, 1342, 1366
HpyF10VI GCNNNNNNNGC 5 cut(s) 230, 1121, 1226, 1235, 1447
HpyF3I CTNAG 5 cut(s) 648, 690, 891, 1059, 1149
HpySE526I ACGT 2 cut(s) 111, 216
Hsp92II CATG 5 cut(s) 52, 599, 841, 997, 1014
KspI CCGCGG 1 cut(s) 780
LmnI GCTCC 2 cut(s) 1129, 1412
Lsp1109I GCAGC 4 cut(s) 910, 1034, 1238, 1459
LweI GCATC 7 cut(s) 91, 1014, 1086, 1131, 1238, 1353, 1459
MaeI CTAG 5 cut(s) 198, 323, 353, 746, 1112
MaeII ACGT 2 cut(s) 111, 216
MaeIII GTNAC 3 cut(s) 170, 331, 787
MbiI CCGCTC 1 cut(s) 150
MboII GAAGA 7 cut(s) 156, 186, 274, 544, 1391, 1397, 1430
MflI RGATCY 5 cut(s) 115, 562, 631, 1184, 1263
MhlI GDGCHC 2 cut(s) 214, 1069
MluCI AATT 1 cut(s) 912
MluI ACGCGT 1 cut(s) 1083
MlyI GAGTC 5 cut(s) 74, 356, 784, 1112, 1364
MmeI TCCRAC 1 cut(s) 76
Mph1103I ATGCAT 1 cut(s) 1007
MseI TTAA 4 cut(s) 17, 137, 1443, 1465
MslI CAYNNNNRTG 3 cut(s) 397, 739, 1455
MspA1I CMGCKG 1 cut(s) 779
MspCI CTTAAG 1 cut(s) 1442
MspI CCGG 2 cut(s) 42, 1178
MspR9I CCNGG 3 cut(s) 78, 287, 1178
MvaI CCWGG 2 cut(s) 78, 287
MvnI CGCG 3 cut(s) 341, 779, 1085
MwoI GCNNNNNNNGC 5 cut(s) 230, 1121, 1226, 1235, 1447
NciI CCSGG 1 cut(s) 1178
NheI GCTAGC 1 cut(s) 322
NlaIII CATG 5 cut(s) 52, 599, 841, 997, 1014
NlaIV GGNNCC 5 cut(s) 117, 427, 1186, 1265, 1322
NmeAIII GCCGAG 1 cut(s) 887
NmuCI GTSAC 2 cut(s) 331, 787
NsiI ATGCAT 1 cut(s) 1007
NspI RCATGY 1 cut(s) 599
OliI CACNNNNGTG 1 cut(s) 739
PciI ACATGT 1 cut(s) 595
PfeI GAWTC 6 cut(s) 45, 343, 408, 495, 664, 1108
PflMI CCANNNNNTGG 1 cut(s) 979
PfoI TCCNGGA 2 cut(s) 76, 1176
PkrI GCNGC 5 cut(s) 184, 925, 1024, 1228, 1449
PleI GAGTC 5 cut(s) 73, 356, 784, 1111, 1363
PmaCI CACGTG 1 cut(s) 112
PmlI CACGTG 1 cut(s) 112
PpsI GAGTC 5 cut(s) 73, 356, 784, 1111, 1363
Ppu21I YACGTR 1 cut(s) 112
PscI ACATGT 1 cut(s) 595
Psp124BI GAGCTC 1 cut(s) 214
Psp6I CCWGG 2 cut(s) 76, 285
PspCI CACGTG 1 cut(s) 112
PspGI CCWGG 2 cut(s) 76, 285
PspN4I GGNNCC 5 cut(s) 117, 427, 1186, 1265, 1322
PspPI GGNCC 4 cut(s) 243, 544, 1034, 1321
PsuI RGATCY 5 cut(s) 115, 562, 631, 1184, 1263
RseI CAYNNNNRTG 3 cut(s) 397, 739, 1455
SacI GAGCTC 1 cut(s) 214
SacII CCGCGG 1 cut(s) 780
SaqAI TTAA 4 cut(s) 17, 137, 1443, 1465
SatI GCNGC 5 cut(s) 183, 924, 1023, 1227, 1448
Sau96I GGNCC 4 cut(s) 243, 544, 1034, 1321
SchI GAGTC 5 cut(s) 74, 356, 784, 1112, 1364
ScrFI CCNGG 3 cut(s) 78, 287, 1178
SduI GDGCHC 2 cut(s) 214, 1069
SfaNI GCATC 7 cut(s) 91, 1014, 1086, 1131, 1238, 1353, 1459
SfcI CTRYAG 2 cut(s) 571, 1131
Sfr303I CCGCGG 1 cut(s) 780
SgrBI CCGCGG 1 cut(s) 780
SinI GGWCC 3 cut(s) 544, 1034, 1321
SmiMI CAYNNNNRTG 3 cut(s) 397, 739, 1455
SmlI CTYRAG 1 cut(s) 1442
SmoI CTYRAG 1 cut(s) 1442
Sse9I AATT 1 cut(s) 912
SsiI CCGC 6 cut(s) 148, 183, 339, 777, 779, 873
SspI AATATT 1 cut(s) 1041
SspMI CTAG 5 cut(s) 198, 323, 353, 746, 1112
SstI GAGCTC 1 cut(s) 214
StyD4I CCNGG 3 cut(s) 76, 285, 1176
StyI CCWWGG 1 cut(s) 713
TaaI ACNGT 4 cut(s) 383, 977, 1019, 1034
TaiI ACGT 2 cut(s) 114, 219
TaqI TCGA 5 cut(s) 1101, 1106, 1256, 1353, 1395
TaqII GACCGA 2 cut(s) 1186, 1338
TasI AATT 1 cut(s) 912
TauI GCSGC 1 cut(s) 185
TfiI GAWTC 6 cut(s) 45, 343, 408, 495, 664, 1108
Tru1I TTAA 4 cut(s) 17, 137, 1443, 1465
Tru9I TTAA 4 cut(s) 17, 137, 1443, 1465
TscAI CASTG 1 cut(s) 253
TseFI GTSAC 2 cut(s) 331, 787
TseI GCWGC 4 cut(s) 923, 1022, 1226, 1447
Tsp45I GTSAC 2 cut(s) 331, 787
TspDTI ATGAA 2 cut(s) 17, 1392
TspGWI ACGGA 2 cut(s) 536, 657
TspRI CASTG 1 cut(s) 253
Van91I CCANNNNNTGG 1 cut(s) 979
Vha464I CTTAAG 1 cut(s) 1442
VpaK11BI GGWCC 3 cut(s) 544, 1034, 1321
XagI CCTNNNNNAGG 2 cut(s) 890, 1134
XbaI TCTAGA 1 cut(s) 197
XceI RCATGY 1 cut(s) 599
XspI CTAG 5 cut(s) 198, 323, 353, 746, 1112
Zsp2I ATGCAT 1 cut(s) 1007
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.