AT5G11360
ERF Family

Protein kinase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0019608
Physical Location & Seq
Reverse (-)
3625570 .. 3626735
1166 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G11360.1

Sequence Viewer

Length: 591 bp
ATGGGAAACATTGTCAAGCCTTTCAAGCAACAACCTTCTTCTTTTGCTTACCAGCCTCTCACCGTCCCTCTAATTCCAGAAGTGGAGGCACAAAGCGAGAATCTGAGAGTCTTCAGTTTCAAGGAATGGATGAAAGCAACGAAGAAATCCAGACAAGACAGGGTCGTAATTCGCGATGATCACTATATTCGATCATTCTACAAGGGCTACATCGATAACACCACATTTGCACCATCAAGAACTAAAACCGGTACCCCTGTTTCTGTTGTCGAATATCTTCATGGCAGTTCACAGGCTCTACAAGAGTGGGTGGACATATTTGGCGTGATCTTGCTTGAGCTTTTAGTTGGTTCACAAGATAGATCAACAGCTTTGAAGAATCAAAGCTCAGATTGGACTGGGTCTTTCTTGCCCGATAATTATAAGATTGGGGAAATAATCGACCCCCGAATAGGAAGCGATTATCCTGTGGATGCGGCCACAAAGATTGTCACACTCATCCAAAGATGCACCAATCGGGACAAGAAGAAACGACCATTGATGCAAGAAGTTTTGGATGCTCTGAATTATATTGCAGGGATTAGGTCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr

Protein Analysis

196

Amino Acids

22.29

Weight (kDa)

9.1

Isoelectric Point (pI)

46.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0019608)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G11360 AT5G11360 AT5G11360 AT5G11400 AT5G11400 AT5G11410 AT5G11410

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 423
Acc65I GGTACC 1 cut(s) 251
AccB1I GGYRCC 1 cut(s) 251
AccII CGCG 1 cut(s) 174
AciI CCGC 1 cut(s) 476
AcoI YGGCCR 1 cut(s) 477
AcuI CTGAAG 1 cut(s) 97
AfaI GTAC 1 cut(s) 253
AfiI CCNNNNNNNGG 1 cut(s) 452
AgeI ACCGGT 1 cut(s) 248
AgsI TTSAA 3 cut(s) 25, 121, 376
AluBI AGCT 3 cut(s) 340, 371, 387
AluI AGCT 3 cut(s) 340, 371, 387
AoxI GGCC 1 cut(s) 477
AsiGI ACCGGT 1 cut(s) 248
Asp700I GAANNNNTTC 1 cut(s) 276
Asp718I GGTACC 1 cut(s) 251
AspS9I GGNCC 1 cut(s) 585
AsuHPI GGTGA 1 cut(s) 52
AvaII GGWCC 1 cut(s) 585
BaeI ACNNNNGTAYC 2 cut(s) 243, 276
BanI GGYRCC 1 cut(s) 251
BbsI GAAGAC 1 cut(s) 103
BccI CCATC 1 cut(s) 241
BclI TGATCA 1 cut(s) 178
BisI GCNGC 1 cut(s) 477
BlsI GCNGC 1 cut(s) 478
Bme18I GGWCC 1 cut(s) 585
BmgT120I GGNCC 1 cut(s) 585
BmiI GGNNCC 1 cut(s) 253
BmrI ACTGGG 1 cut(s) 408
BmsI GCATC 4 cut(s) 463, 497, 531, 547
BmuI ACTGGG 1 cut(s) 408
BpiI GAAGAC 1 cut(s) 103
BpuEI CTTGAG 1 cut(s) 356
Bsa29I ATCGAT 1 cut(s) 213
BsaWI WCCGGW 1 cut(s) 248
Bsc4I CCNNNNNNNGG 1 cut(s) 452
Bse118I RCCGGY 1 cut(s) 248
Bse1I ACTGG 1 cut(s) 403
BseCI ATCGAT 1 cut(s) 213
BseGI GGATG 4 cut(s) 135, 478, 498, 562
BseLI CCNNNNNNNGG 1 cut(s) 452
BseMII CTCAG 2 cut(s) 95, 402
BseNI ACTGG 1 cut(s) 403
Bsh1236I CGCG 1 cut(s) 174
BshFI GGCC 1 cut(s) 479
BshNI GGYRCC 1 cut(s) 251
BshTI ACCGGT 1 cut(s) 248
BshVI ATCGAT 1 cut(s) 213
BsiSI CCGG 1 cut(s) 249
BslFI GGGAC 2 cut(s) 50, 533
BslI CCNNNNNNNGG 1 cut(s) 452
BsmFI GGGAC 2 cut(s) 50, 533
BsnI GGCC 1 cut(s) 479
Bsp143I GATC 4 cut(s) 178, 191, 327, 362
Bsp68I TCGCGA 1 cut(s) 174
BspACI CCGC 1 cut(s) 476
BspANI GGCC 1 cut(s) 479
BspCNI CTCAG 2 cut(s) 96, 401
BspDI ATCGAT 1 cut(s) 213
BspFNI CGCG 1 cut(s) 174
BspLI GGNNCC 1 cut(s) 253
BspT107I GGYRCC 1 cut(s) 251
BsrFI RCCGGY 1 cut(s) 248
BsrI ACTGG 1 cut(s) 403
BssAI RCCGGY 1 cut(s) 248
BssMI GATC 4 cut(s) 178, 191, 327, 362
Bst4CI ACNGT 1 cut(s) 64
BstDEI CTNAG 2 cut(s) 104, 388
BstF5I GGATG 4 cut(s) 135, 478, 498, 562
BstFNI CGCG 1 cut(s) 174
BstKTI GATC 4 cut(s) 181, 194, 330, 365
BstMBI GATC 4 cut(s) 178, 191, 327, 362
BstMWI GCNNNNNNNGC 1 cut(s) 25
BstUI CGCG 1 cut(s) 174
BstV2I GAAGAC 1 cut(s) 103
Bsu15I ATCGAT 1 cut(s) 213
BsuRI GGCC 1 cut(s) 479
BsuTUI ATCGAT 1 cut(s) 213
BtgZI GCGATG 1 cut(s) 189
BtsCI GGATG 4 cut(s) 135, 478, 498, 562
BtuMI TCGCGA 1 cut(s) 174
Cfr10I RCCGGY 1 cut(s) 248
Cfr13I GGNCC 1 cut(s) 585
ClaI ATCGAT 1 cut(s) 213
Csp6I GTAC 1 cut(s) 252
CspAI ACCGGT 1 cut(s) 248
CspCI CAANNNNNGTGG 2 cut(s) 469, 504
CviAII CATG 1 cut(s) 281
CviJI RGCY 8 cut(s) 19, 55, 207, 296, 340, 371, 387, 479
CviKI_1 RGCY 8 cut(s) 19, 55, 207, 296, 340, 371, 387, 479
CviQI GTAC 1 cut(s) 252
DdeI CTNAG 2 cut(s) 104, 388
DpnI GATC 4 cut(s) 180, 193, 329, 364
DpnII GATC 4 cut(s) 178, 191, 327, 362
EaeI YGGCCR 1 cut(s) 477
Eco47I GGWCC 1 cut(s) 585
Eco57I CTGAAG 1 cut(s) 97
EcoO109I RGGNCCY 1 cut(s) 585
FaeI CATG 1 cut(s) 284
FaiI YATR 5 cut(s) 186, 282, 317, 423, 570
FaqI GGGAC 2 cut(s) 50, 533
FatI CATG 1 cut(s) 280
FbaI TGATCA 1 cut(s) 178
Fnu4HI GCNGC 1 cut(s) 477
FokI GGATG 4 cut(s) 142, 485, 485, 569
Fsp4HI GCNGC 1 cut(s) 477
GluI GCNGC 1 cut(s) 477
HaeIII GGCC 1 cut(s) 479
HapII CCGG 1 cut(s) 249
Hin1II CATG 1 cut(s) 284
HinfI GANTC 3 cut(s) 100, 108, 379
HpaII CCGG 1 cut(s) 249
HphI GGTGA 1 cut(s) 52
Hpy166II GTNNAC 3 cut(s) 290, 313, 353
Hpy188I TCNGA 3 cut(s) 105, 391, 564
Hpy188III TCNNGA 5 cut(s) 77, 150, 173, 237, 518
Hpy8I GTNNAC 3 cut(s) 290, 313, 353
HpyAV CCTTC 1 cut(s) 45
HpyCH4III ACNGT 1 cut(s) 64
HpyCH4V TGCA 4 cut(s) 230, 510, 544, 575
HpyF10VI GCNNNNNNNGC 1 cut(s) 25
HpyF3I CTNAG 2 cut(s) 104, 388
Hsp92II CATG 1 cut(s) 284
KpnI GGTACC 1 cut(s) 255
Ksp22I TGATCA 1 cut(s) 178
Kzo9I GATC 4 cut(s) 178, 191, 327, 362
LweI GCATC 4 cut(s) 463, 497, 531, 547
MaeIII GTNAC 1 cut(s) 490
MalI GATC 4 cut(s) 180, 193, 329, 364
MboI GATC 4 cut(s) 178, 191, 327, 362
MboII GAAGA 6 cut(s) 30, 103, 154, 269, 388, 538
MluCI AATT 4 cut(s) 72, 168, 418, 565
MlyI GAGTC 1 cut(s) 117
MnlI CCTC 3 cut(s) 66, 78, 79
MroXI GAANNNNTTC 1 cut(s) 276
MspI CCGG 1 cut(s) 249
MvnI CGCG 1 cut(s) 174
MwoI GCNNNNNNNGC 1 cut(s) 25
NdeII GATC 4 cut(s) 178, 191, 327, 362
NlaIII CATG 1 cut(s) 284
NlaIV GGNNCC 1 cut(s) 253
NmuCI GTSAC 1 cut(s) 490
NruI TCGCGA 1 cut(s) 174
PcsI WCGNNNNNNNCGW 1 cut(s) 171
PdmI GAANNNNTTC 1 cut(s) 276
PfeI GAWTC 2 cut(s) 100, 379
PflFI GACNNNGTC 2 cut(s) 161, 400
PinAI ACCGGT 1 cut(s) 248
PkrI GCNGC 1 cut(s) 478
PleI GAGTC 1 cut(s) 116
PpsI GAGTC 1 cut(s) 116
PpuMI RGGWCCY 1 cut(s) 585
PsiI TTATAA 1 cut(s) 423
Psp5II RGGWCCY 1 cut(s) 585
PspN4I GGNNCC 1 cut(s) 253
PspPI GGNCC 1 cut(s) 585
PspPPI RGGWCCY 1 cut(s) 585
PsyI GACNNNGTC 2 cut(s) 161, 400
RruI TCGCGA 1 cut(s) 174
RsaI GTAC 1 cut(s) 253
RsaNI GTAC 1 cut(s) 252
SatI GCNGC 1 cut(s) 477
Sau3AI GATC 4 cut(s) 178, 191, 327, 362
Sau96I GGNCC 1 cut(s) 585
SchI GAGTC 1 cut(s) 117
SetI ASST 5 cut(s) 37, 342, 373, 389, 587
SfaNI GCATC 4 cut(s) 463, 497, 531, 547
SinI GGWCC 1 cut(s) 585
SmlI CTYRAG 1 cut(s) 335
SmoI CTYRAG 1 cut(s) 335
Sse9I AATT 4 cut(s) 72, 168, 418, 565
SsiI CCGC 1 cut(s) 476
TaaI ACNGT 1 cut(s) 64
TaqI TCGA 4 cut(s) 190, 213, 270, 441
TasI AATT 4 cut(s) 72, 168, 418, 565
TauI GCSGC 1 cut(s) 479
TfiI GAWTC 2 cut(s) 100, 379
TseFI GTSAC 1 cut(s) 490
Tsp45I GTSAC 1 cut(s) 490
TspDTI ATGAA 2 cut(s) 146, 269
Tth111I GACNNNGTC 2 cut(s) 161, 400
VpaK11BI GGWCC 1 cut(s) 585
XmnI GAANNNNTTC 1 cut(s) 276
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.