AT5G11400
ERF Family

Protein kinase superfamily

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
3636614 .. 3638059
1446 bp
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UTR
Exon/CDS
Intron
AT5G11400.1

Sequence Viewer

Length: 621 bp
ATGGGAAACTGTCTAAAGCATTTCAAACAACAACTTCCTTCAATTGCTCCCAAGCCTCTCATTATCCCTCCAATATTTTCAGAATCTGAGAGTCTTCAGATTCGCGGATTGAAGAAAGCGACAAAGAAATTCAGACAAGACAGGGTCGTAGAATGCGAGGATTACTCTGTTCGAAAATTCTACAAGGGCTACATAGATGAAACCACATTTGCACCATCAAGAGCTGGAACCGGAATCGCTGTTTCTGTCATGGAATGTGATAGTTCACGCTCTTTACAAGACTGGATGGCAGTAGTGAGGTCTCTTGGACAGTTGTCTCATCAGAATTTGGTCAATTTCTTGGGTTACTGTTGTGAAGACAACAAACCATTCTTCTTGGTATTTGAATACTCGCACAAAGGAAGTTTGGACAGTCACATTTTCGGAAAAGAAGAAGAGGCATTGCCATGGGAAATACGGGTTAAGATAGCCATTGGAACAGCTCAAGGTCTCGCGTTTCTTCACTCGATCAAGAACAGCCCCCTAAACCGAGAACTCAGGATGCATAACATTATGCTTGACGAGCAATACAATGCAAAAACTGTTCTATCTCGAACCAACCAAACGAAGCTTGGTAGATGA

Protein Analysis

206

Amino Acids

23.49

Weight (kDa)

9.07

Isoelectric Point (pI)

57.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 62 - 193 6e-16 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 95 - 193 9e-10 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0019608)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 105, 494
AciI CCGC 1 cut(s) 105
AcsI RAATTY 3 cut(s) 128, 176, 325
AcuI CTGAAG 1 cut(s) 80
AgsI TTSAA 4 cut(s) 25, 42, 112, 386
AluBI AGCT 3 cut(s) 224, 482, 610
AluI AGCT 3 cut(s) 224, 482, 610
Alw26I GTCTC 3 cut(s) 306, 321, 494
AlwNI CAGNNNCTG 1 cut(s) 86
ApoI RAATTY 3 cut(s) 128, 176, 325
AsuII TTCGAA 1 cut(s) 172
BbsI GAAGAC 2 cut(s) 86, 363
BccI CCATC 2 cut(s) 223, 280
BcoDI GTCTC 3 cut(s) 306, 321, 494
BmiI GGNNCC 1 cut(s) 229
BmsI GCATC 1 cut(s) 531
BoxI GACNNNNGTC 1 cut(s) 313
BpiI GAAGAC 2 cut(s) 86, 363
BplI GAGNNNNNCTC 2 cut(s) 149, 181
Bpu14I TTCGAA 1 cut(s) 172
BpuEI CTTGAG 1 cut(s) 468
BsaI GGTCTC 2 cut(s) 306, 494
BsaJI CCNNGG 1 cut(s) 446
BsaWI WCCGGW 1 cut(s) 230
Bse1I ACTGG 1 cut(s) 287
Bse3DI GCAATG 1 cut(s) 440
BseDI CCNNGG 1 cut(s) 446
BseGI GGATG 2 cut(s) 291, 546
BseMI GCAATG 1 cut(s) 440
BseMII CTCAG 2 cut(s) 78, 550
BseNI ACTGG 1 cut(s) 287
Bsh1236I CGCG 2 cut(s) 105, 494
BsiSI CCGG 1 cut(s) 231
BsmAI GTCTC 3 cut(s) 306, 321, 494
BsmI GAATGC 1 cut(s) 158
Bso31I GGTCTC 2 cut(s) 306, 494
Bsp119I TTCGAA 1 cut(s) 172
Bsp143I GATC 1 cut(s) 507
Bsp19I CCATGG 1 cut(s) 446
BspACI CCGC 1 cut(s) 105
BspCNI CTCAG 2 cut(s) 79, 549
BspFNI CGCG 2 cut(s) 105, 494
BspLI GGNNCC 1 cut(s) 229
BspT104I TTCGAA 1 cut(s) 172
BspTNI GGTCTC 2 cut(s) 306, 494
BsrDI GCAATG 1 cut(s) 440
BsrI ACTGG 1 cut(s) 287
BssECI CCNNGG 1 cut(s) 446
BssMI GATC 1 cut(s) 507
BssT1I CCWWGG 1 cut(s) 446
Bst4CI ACNGT 5 cut(s) 11, 312, 350, 413, 583
Bst6I CTCTTC 1 cut(s) 429
BstBI TTCGAA 1 cut(s) 172
BstDEI CTNAG 2 cut(s) 87, 536
BstDSI CCRYGG 1 cut(s) 446
BstF5I GGATG 2 cut(s) 291, 546
BstFNI CGCG 2 cut(s) 105, 494
BstKTI GATC 1 cut(s) 510
BstMAI GTCTC 3 cut(s) 306, 321, 494
BstMBI GATC 1 cut(s) 507
BstMWI GCNNNNNNNGC 1 cut(s) 562
BstPAI GACNNNNGTC 1 cut(s) 313
BstUI CGCG 2 cut(s) 105, 494
BstV2I GAAGAC 2 cut(s) 86, 363
BtgI CCRYGG 1 cut(s) 446
BtsCI GGATG 2 cut(s) 291, 546
CaiI CAGNNNCTG 1 cut(s) 86
CviAII CATG 2 cut(s) 250, 447
CviJI RGCY 7 cut(s) 55, 189, 224, 470, 482, 519, 610
CviKI_1 RGCY 7 cut(s) 55, 189, 224, 470, 482, 519, 610
DdeI CTNAG 2 cut(s) 87, 536
DpnI GATC 1 cut(s) 509
DpnII GATC 1 cut(s) 507
Eam1104I CTCTTC 1 cut(s) 429
EarI CTCTTC 1 cut(s) 429
Eco130I CCWWGG 1 cut(s) 446
Eco31I GGTCTC 2 cut(s) 306, 494
Eco57I CTGAAG 1 cut(s) 80
EcoT14I CCWWGG 1 cut(s) 446
EcoT22I ATGCAT 1 cut(s) 546
ErhI CCWWGG 1 cut(s) 446
FaeI CATG 2 cut(s) 253, 450
FaiI YATR 5 cut(s) 194, 251, 448, 546, 554
FatI CATG 2 cut(s) 249, 446
FokI GGATG 2 cut(s) 298, 553
HapII CCGG 1 cut(s) 231
Hin1II CATG 2 cut(s) 253, 450
HindIII AAGCTT 1 cut(s) 608
HinfI GANTC 4 cut(s) 83, 91, 100, 234
HpaII CCGG 1 cut(s) 231
Hpy166II GTNNAC 1 cut(s) 266
Hpy188I TCNGA 6 cut(s) 82, 88, 99, 134, 324, 425
Hpy188III TCNNGA 4 cut(s) 219, 511, 538, 591
Hpy8I GTNNAC 1 cut(s) 266
HpyAV CCTTC 1 cut(s) 48
HpyCH4III ACNGT 5 cut(s) 11, 312, 350, 413, 583
HpyCH4V TGCA 3 cut(s) 212, 544, 575
HpyF10VI GCNNNNNNNGC 1 cut(s) 562
HpyF3I CTNAG 2 cut(s) 87, 536
Hsp92II CATG 2 cut(s) 253, 450
Kzo9I GATC 1 cut(s) 507
LmnI GCTCC 1 cut(s) 52
LpnPI CCDG 5 cut(s) 127, 210, 244, 268, 523
LweI GCATC 1 cut(s) 531
MaeIII GTNAC 2 cut(s) 344, 413
MalI GATC 1 cut(s) 509
MboI GATC 1 cut(s) 507
MboII GAAGA 7 cut(s) 86, 124, 364, 368, 443, 446, 491
MfeI CAATTG 1 cut(s) 42
MluCI AATT 5 cut(s) 42, 128, 176, 325, 334
MlyI GAGTC 1 cut(s) 100
MnlI CCTC 5 cut(s) 66, 78, 151, 291, 430
Mph1103I ATGCAT 1 cut(s) 546
MseI TTAA 1 cut(s) 462
MslI CAYNNNNRTG 1 cut(s) 445
MspI CCGG 1 cut(s) 231
MunI CAATTG 1 cut(s) 42
Mva1269I GAATGC 1 cut(s) 158
MvnI CGCG 2 cut(s) 105, 494
MwoI GCNNNNNNNGC 1 cut(s) 562
NcoI CCATGG 1 cut(s) 446
NdeII GATC 1 cut(s) 507
NlaIII CATG 2 cut(s) 253, 450
NlaIV GGNNCC 1 cut(s) 229
NmuCI GTSAC 1 cut(s) 413
NsiI ATGCAT 1 cut(s) 546
NspV TTCGAA 1 cut(s) 172
PcsI WCGNNNNNNNCGW 1 cut(s) 153
PctI GAATGC 1 cut(s) 158
PfeI GAWTC 3 cut(s) 83, 100, 234
PflFI GACNNNGTC 1 cut(s) 143
PleI GAGTC 1 cut(s) 99
PpsI GAGTC 1 cut(s) 99
PshAI GACNNNNGTC 1 cut(s) 313
PspN4I GGNNCC 1 cut(s) 229
PstNI CAGNNNCTG 1 cut(s) 86
PsyI GACNNNGTC 1 cut(s) 143
RseI CAYNNNNRTG 1 cut(s) 445
SaqAI TTAA 1 cut(s) 462
Sau3AI GATC 1 cut(s) 507
SchI GAGTC 1 cut(s) 100
SetI ASST 5 cut(s) 226, 302, 484, 490, 612
SfaNI GCATC 1 cut(s) 531
SfuI TTCGAA 1 cut(s) 172
SmiMI CAYNNNNRTG 1 cut(s) 445
SmlI CTYRAG 1 cut(s) 483
SmoI CTYRAG 1 cut(s) 483
Sse9I AATT 5 cut(s) 42, 128, 176, 325, 334
SsiI CCGC 1 cut(s) 105
SspI AATATT 1 cut(s) 75
StyI CCWWGG 1 cut(s) 446
TaaI ACNGT 5 cut(s) 11, 312, 350, 413, 583
TaqI TCGA 3 cut(s) 172, 506, 592
TasI AATT 5 cut(s) 42, 128, 176, 325, 334
TfiI GAWTC 3 cut(s) 83, 100, 234
Tru1I TTAA 1 cut(s) 462
Tru9I TTAA 1 cut(s) 462
TseFI GTSAC 1 cut(s) 413
Tsp45I GTSAC 1 cut(s) 413
TspDTI ATGAA 1 cut(s) 213
Tth111I GACNNNGTC 1 cut(s) 143
XapI RAATTY 3 cut(s) 128, 176, 325
XcmI CCANNNNNNNNNTGG 1 cut(s) 608
Zsp2I ATGCAT 1 cut(s) 546
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.