RNA splicing
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G12190 |
| fragaria_vesca | FvH4_4g01940 |
| malus_domestica | MD08G1047500.v1.1 |
| prunus_persica | Prupe.1G025000_v2.0.a1 Prupe.1G400800_v2.0.a1 |
| pyrus_communis | pycom08g04000 |
| rosa_chinensis | RchiOBHm_Chr4g0388901 |
| rosa_laevigata | RLG00000010015 |
| rosa_multiflora | Rmu_sc0000697.1_g000003 Rmu_sc0005486.1_g000012 |
| rosa_roxburghii | Rroxscaffold_5G00335210 |
| rosa_rugosa | Rorug03G0320900 |
| rosa_samantha | Rh4BG018600 Rh4CG028400 Rh4DG019200 |
| rosa_wichuraiana | Rw4G001830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 255 |
| AccB1I | GGYRCC | 1 cut(s) | 255 |
| AccI | GTMKAC | 1 cut(s) | 222 |
| AccII | CGCG | 3 cut(s) | 57, 248, 284 |
| AfaI | GTAC | 4 cut(s) | 107, 125, 175, 257 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 46 |
| AgsI | TTSAA | 1 cut(s) | 241 |
| Alw21I | GWGCWC | 1 cut(s) | 63 |
| Alw26I | GTCTC | 1 cut(s) | 361 |
| Asp718I | GGTACC | 1 cut(s) | 255 |
| AspLEI | GCGC | 1 cut(s) | 131 |
| AsuHPI | GGTGA | 2 cut(s) | 61, 322 |
| AsuII | TTCGAA | 1 cut(s) | 145 |
| BanI | GGYRCC | 1 cut(s) | 255 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 98, 130 |
| BbsI | GAAGAC | 1 cut(s) | 8 |
| Bbv12I | GWGCWC | 1 cut(s) | 63 |
| BccI | CCATC | 1 cut(s) | 234 |
| BceAI | ACGGC | 2 cut(s) | 142, 203 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 135, 169 |
| BcoDI | GTCTC | 1 cut(s) | 361 |
| BmiI | GGNNCC | 1 cut(s) | 257 |
| BmsI | GCATC | 1 cut(s) | 196 |
| BpiI | GAAGAC | 1 cut(s) | 8 |
| Bpu14I | TTCGAA | 1 cut(s) | 145 |
| BsaBI | GATNNNNATC | 1 cut(s) | 146 |
| BsaWI | WCCGGW | 1 cut(s) | 43 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 46 |
| Bse8I | GATNNNNATC | 1 cut(s) | 146 |
| BseJI | GATNNNNATC | 1 cut(s) | 146 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 46 |
| Bsh1236I | CGCG | 3 cut(s) | 57, 248, 284 |
| BshNI | GGYRCC | 1 cut(s) | 255 |
| BsiHKAI | GWGCWC | 1 cut(s) | 63 |
| BsiSI | CCGG | 1 cut(s) | 44 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 46 |
| BsmAI | GTCTC | 1 cut(s) | 361 |
| Bsp119I | TTCGAA | 1 cut(s) | 145 |
| Bsp1286I | GDGCHC | 1 cut(s) | 63 |
| Bsp143I | GATC | 1 cut(s) | 327 |
| Bsp68I | TCGCGA | 1 cut(s) | 248 |
| BspFNI | CGCG | 3 cut(s) | 57, 248, 284 |
| BspLI | GGNNCC | 1 cut(s) | 257 |
| BspT104I | TTCGAA | 1 cut(s) | 145 |
| BspT107I | GGYRCC | 1 cut(s) | 255 |
| BssMI | GATC | 1 cut(s) | 327 |
| Bst6I | CTCTTC | 2 cut(s) | 93, 308 |
| BstBI | TTCGAA | 1 cut(s) | 145 |
| BstC8I | GCNNGC | 2 cut(s) | 59, 282 |
| BstFNI | CGCG | 3 cut(s) | 57, 248, 284 |
| BstHHI | GCGC | 1 cut(s) | 131 |
| BstKTI | GATC | 1 cut(s) | 330 |
| BstMAI | GTCTC | 1 cut(s) | 361 |
| BstMBI | GATC | 1 cut(s) | 327 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 126, 135, 215 |
| BstUI | CGCG | 3 cut(s) | 57, 248, 284 |
| BstV2I | GAAGAC | 1 cut(s) | 8 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 233 |
| BtuMI | TCGCGA | 1 cut(s) | 248 |
| Cac8I | GCNNGC | 2 cut(s) | 59, 282 |
| CfoI | GCGC | 1 cut(s) | 131 |
| Csp6I | GTAC | 4 cut(s) | 106, 124, 174, 256 |
| CviJI | RGCY | 1 cut(s) | 237 |
| CviKI_1 | RGCY | 1 cut(s) | 237 |
| CviQI | GTAC | 4 cut(s) | 106, 124, 174, 256 |
| DpnI | GATC | 1 cut(s) | 329 |
| DpnII | GATC | 1 cut(s) | 327 |
| Eam1104I | CTCTTC | 2 cut(s) | 93, 308 |
| EarI | CTCTTC | 2 cut(s) | 93, 308 |
| Eco32I | GATATC | 2 cut(s) | 112, 199 |
| EcoRV | GATATC | 2 cut(s) | 112, 199 |
| FaiI | YATR | 3 cut(s) | 89, 271, 351 |
| FblI | GTMKAC | 1 cut(s) | 222 |
| GlaI | GCGC | 1 cut(s) | 130 |
| HapII | CCGG | 1 cut(s) | 44 |
| HhaI | GCGC | 1 cut(s) | 131 |
| Hin6I | GCGC | 1 cut(s) | 129 |
| HinP1I | GCGC | 1 cut(s) | 129 |
| HincII | GTYRAC | 1 cut(s) | 223 |
| HindII | GTYRAC | 1 cut(s) | 223 |
| HinfI | GANTC | 6 cut(s) | 36, 52, 142, 147, 250, 354 |
| HpaII | CCGG | 1 cut(s) | 44 |
| HphI | GGTGA | 2 cut(s) | 61, 322 |
| Hpy166II | GTNNAC | 2 cut(s) | 190, 223 |
| Hpy188III | TCNNGA | 1 cut(s) | 247 |
| Hpy8I | GTNNAC | 2 cut(s) | 190, 223 |
| Hpy99I | CGWCG | 4 cut(s) | 169, 188, 224, 248 |
| HpyAV | CCTTC | 2 cut(s) | 86, 190 |
| HpyCH4IV | ACGT | 2 cut(s) | 66, 243 |
| HpyCH4V | TGCA | 1 cut(s) | 340 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 126, 135, 215 |
| HpySE526I | ACGT | 2 cut(s) | 66, 243 |
| HspAI | GCGC | 1 cut(s) | 129 |
| KpnI | GGTACC | 1 cut(s) | 259 |
| Kzo9I | GATC | 1 cut(s) | 327 |
| LpnPI | CCDG | 7 cut(s) | 46, 57, 152, 219, 290, 320, 326 |
| LweI | GCATC | 1 cut(s) | 196 |
| MaeII | ACGT | 2 cut(s) | 66, 243 |
| MaeIII | GTNAC | 2 cut(s) | 26, 71 |
| MalI | GATC | 1 cut(s) | 329 |
| MboI | GATC | 1 cut(s) | 327 |
| MboII | GAAGA | 7 cut(s) | 8, 106, 110, 298, 322, 325, 332 |
| MhlI | GDGCHC | 1 cut(s) | 63 |
| MluCI | AATT | 1 cut(s) | 132 |
| MlyI | GAGTC | 2 cut(s) | 30, 363 |
| MnlI | CCTC | 2 cut(s) | 40, 187 |
| MseI | TTAA | 1 cut(s) | 84 |
| MspI | CCGG | 1 cut(s) | 44 |
| MvnI | CGCG | 3 cut(s) | 57, 248, 284 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 126, 135, 215 |
| NdeII | GATC | 1 cut(s) | 327 |
| NlaIV | GGNNCC | 1 cut(s) | 257 |
| NruI | TCGCGA | 1 cut(s) | 248 |
| NspV | TTCGAA | 1 cut(s) | 145 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 142, 189 |
| PfeI | GAWTC | 4 cut(s) | 52, 142, 147, 250 |
| PleI | GAGTC | 2 cut(s) | 30, 362 |
| PpsI | GAGTC | 2 cut(s) | 30, 362 |
| PspN4I | GGNNCC | 1 cut(s) | 257 |
| RruI | TCGCGA | 1 cut(s) | 248 |
| RsaI | GTAC | 4 cut(s) | 107, 125, 175, 257 |
| RsaNI | GTAC | 4 cut(s) | 106, 124, 174, 256 |
| SalI | GTCGAC | 1 cut(s) | 221 |
| SaqAI | TTAA | 1 cut(s) | 84 |
| Sau3AI | GATC | 1 cut(s) | 327 |
| SchI | GAGTC | 2 cut(s) | 30, 363 |
| SduI | GDGCHC | 1 cut(s) | 63 |
| SetI | ASST | 6 cut(s) | 51, 69, 78, 175, 246, 261 |
| SfaNI | GCATC | 1 cut(s) | 196 |
| SfuI | TTCGAA | 1 cut(s) | 145 |
| Sse9I | AATT | 1 cut(s) | 132 |
| TaiI | ACGT | 2 cut(s) | 69, 246 |
| TaqI | TCGA | 2 cut(s) | 145, 222 |
| TasI | AATT | 1 cut(s) | 132 |
| TfiI | GAWTC | 4 cut(s) | 52, 142, 147, 250 |
| Tru1I | TTAA | 1 cut(s) | 84 |
| Tru9I | TTAA | 1 cut(s) | 84 |
| XmiI | GTMKAC | 1 cut(s) | 222 |