Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0023599

Physical Location & Seq

Genomic Coordinates Forward (+)

4522149 .. 4522935

Gene Structure 787 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G14010.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 486 bp

ATGGCGGAACCACCACCGTCTTACCTTCATTTCGTAGGTCCTGCAAAAACTCGATCATCAAGCAAACGCCACTCTTTCTCCTCCTCTGCACATCCAGCTTCCCACCGTCTCTTTCCATGTCAGTACTGTCCTCGAAAGTTCTACACATCTCAAGCTCTCGGCGGTCACCAAAACGCTCACAAACGCGAACGCGCCGCTGCTCGTCGTAACCTCGGCGTCCTCGCTAACTCTCCACCCATCCTCGACGACAACAACACGTTTCTTCGTCCTTACCCTTGCTTTTACCAAAACCCATTTCAAGGATCTACTTCTGGAAACGAACCGCTTCAGGAACAGCCGACGATGATGACGATGGATGGCTACGATCCGTTTCATCCGTATCCGTATGTGTACCCTTTTGCATTATCCGGTAACAACAACGACGGAGGAAACGGCGTTATGGAAGAAGACGAGCCTCTCGATCTAGACCTTTCTCTCCGTTTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0009909 GO:0010022 GO:0010073 GO:0010468 GO:0010556 GO:0010582 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048367 GO:0048507 GO:0048580 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051239 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000026 GO:2000112 GO:2000241 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

161

Amino Acids

18.05

Weight (kDa)

6.64

Isoelectric Point (pI)

63.64

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0023599)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G14010
malus_domestica	MD09G1005900.v1.1
prunus_persica	Prupe.3G311100_v2.0.a1

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	484
AccII	CGCG	2 cut(s)	186, 192
AciI	CCGC	4 cut(s)	5, 162, 195, 323
AclWI	GGATC	2 cut(s)	310, 359
AcuI	CTGAAG	1 cut(s)	311
AcyI	GRCGYC	1 cut(s)	216
AfaI	GTAC	2 cut(s)	125, 392
AfiI	CCNNNNNNNGG	1 cut(s)	299
AflIII	ACRYGT	1 cut(s)	255
AgsI	TTSAA	1 cut(s)	299
AjuI	GAANNNNNNNTTGG	2 cut(s)	279, 311
AluBI	AGCT	2 cut(s)	98, 155
AluI	AGCT	2 cut(s)	98, 155
Alw26I	GTCTC	1 cut(s)	113
AlwI	GGATC	2 cut(s)	310, 359
ApeKI	GCWGC	1 cut(s)	197
Asp700I	GAANNNNTTC	1 cut(s)	324
AspLEI	GCGC	1 cut(s)	194
AspS9I	GGNCC	1 cut(s)	38
AsuHPI	GGTGA	1 cut(s)	158
AvaII	GGWCC	1 cut(s)	38
BbsI	GAAGAC	1 cut(s)	453
BbvI	GCAGC	1 cut(s)	184
BccI	CCATC	3 cut(s)	245, 346, 350
BceAI	ACGGC	1 cut(s)	448
BciVI	GTATCC	1 cut(s)	390
BcoDI	GTCTC	1 cut(s)	113
BfaI	CTAG	1 cut(s)	464
BfuI	GTATCC	1 cut(s)	390
BisI	GCNGC	2 cut(s)	195, 198
BlsI	GCNGC	2 cut(s)	196, 199
BmcAI	AGTACT	1 cut(s)	125
Bme18I	GGWCC	1 cut(s)	38
BmgT120I	GGNCC	1 cut(s)	38
BmiI	GGNNCC	1 cut(s)	9
BpiI	GAAGAC	1 cut(s)	453
BpuEI	CTTGAG	1 cut(s)	135
BsaHI	GRCGYC	1 cut(s)	216
BsaJI	CCNNGG	1 cut(s)	211
BsaWI	WCCGGW	1 cut(s)	407
BsaXI	ACNNNNNCTCC	2 cut(s)	62, 92
Bsc4I	CCNNNNNNNGG	1 cut(s)	299
BseDI	CCNNGG	1 cut(s)	211
BseGI	GGATG	4 cut(s)	91, 237, 361, 373
BseLI	CCNNNNNNNGG	1 cut(s)	299
BseRI	GAGGAG	2 cut(s)	70, 73
BseXI	GCAGC	1 cut(s)	184
BsgI	GTGCAG	1 cut(s)	72
Bsh1236I	CGCG	2 cut(s)	186, 192
BsiSI	CCGG	1 cut(s)	408
BslI	CCNNNNNNNGG	1 cut(s)	299
BsmAI	GTCTC	1 cut(s)	113
BsmBI	CGTCTC	1 cut(s)	113
Bsp143I	GATC	4 cut(s)	53, 302, 364, 460
BspACI	CCGC	4 cut(s)	5, 162, 195, 323
BspFNI	CGCG	2 cut(s)	186, 192
BspLI	GGNNCC	1 cut(s)	9
BspPI	GGATC	2 cut(s)	310, 359
BssECI	CCNNGG	1 cut(s)	211
BssMI	GATC	4 cut(s)	53, 302, 364, 460
BssNI	GRCGYC	1 cut(s)	216
Bst4CI	ACNGT	3 cut(s)	18, 107, 128
BstACI	GRCGYC	1 cut(s)	216
BstEII	GGTNACC	1 cut(s)	164
BstF5I	GGATG	4 cut(s)	91, 237, 361, 373
BstFNI	CGCG	2 cut(s)	186, 192
BstHHI	GCGC	1 cut(s)	194
BstKTI	GATC	4 cut(s)	56, 305, 367, 463
BstMAI	GTCTC	1 cut(s)	113
BstMBI	GATC	4 cut(s)	53, 302, 364, 460
BstMWI	GCNNNNNNNGC	1 cut(s)	95
BstPI	GGTNACC	1 cut(s)	164
BstUI	CGCG	2 cut(s)	186, 192
BstV1I	GCAGC	1 cut(s)	184
BstV2I	GAAGAC	1 cut(s)	453
BstX2I	RGATCY	1 cut(s)	302
BstYI	RGATCY	1 cut(s)	302
BsuI	GTATCC	1 cut(s)	390
BtsCI	GGATG	4 cut(s)	91, 237, 361, 373
CfoI	GCGC	1 cut(s)	194
Cfr13I	GGNCC	1 cut(s)	38
CseI	GACGC	1 cut(s)	205
Csp6I	GTAC	2 cut(s)	124, 391
CviAII	CATG	1 cut(s)	117
CviJI	RGCY	5 cut(s)	98, 155, 337, 360, 454
CviKI_1	RGCY	5 cut(s)	98, 155, 337, 360, 454
CviQI	GTAC	2 cut(s)	124, 391
DpnI	GATC	4 cut(s)	55, 304, 366, 462
DpnII	GATC	4 cut(s)	53, 302, 364, 460
EciI	GGCGGA	1 cut(s)	20
Eco47I	GGWCC	1 cut(s)	38
Eco57I	CTGAAG	1 cut(s)	311
Eco91I	GGTNACC	1 cut(s)	164
EcoO109I	RGGNCCY	1 cut(s)	38
EcoO65I	GGTNACC	1 cut(s)	164
Esp3I	CGTCTC	1 cut(s)	113
FaeI	CATG	1 cut(s)	120
FaiI	YATR	4 cut(s)	118, 387, 440, 484
FatI	CATG	1 cut(s)	116
Fnu4HI	GCNGC	2 cut(s)	195, 198
FokI	GGATG	4 cut(s)	78, 224, 360, 368
Fsp4HI	GCNGC	2 cut(s)	195, 198
FspBI	CTAG	1 cut(s)	464
GlaI	GCGC	1 cut(s)	193
GluI	GCNGC	2 cut(s)	195, 198
HapII	CCGG	1 cut(s)	408
HgaI	GACGC	1 cut(s)	205
HhaI	GCGC	1 cut(s)	194
Hin1I	GRCGYC	1 cut(s)	216
Hin1II	CATG	1 cut(s)	120
Hin6I	GCGC	1 cut(s)	192
HinP1I	GCGC	1 cut(s)	192
HpaII	CCGG	1 cut(s)	408
HphI	GGTGA	1 cut(s)	158
Hpy166II	GTNNAC	1 cut(s)	391
Hpy188III	TCNNGA	4 cut(s)	312, 329, 458, 464
Hpy8I	GTNNAC	1 cut(s)	391
Hpy99I	CGWCG	4 cut(s)	207, 248, 343, 425
HpyAV	CCTTC	1 cut(s)	35
HpyCH4III	ACNGT	3 cut(s)	18, 107, 128
HpyCH4IV	ACGT	1 cut(s)	257
HpyCH4V	TGCA	3 cut(s)	44, 89, 401
HpyF10VI	GCNNNNNNNGC	1 cut(s)	95
HpySE526I	ACGT	1 cut(s)	257
Hsp92I	GRCGYC	1 cut(s)	216
Hsp92II	CATG	1 cut(s)	120
HspAI	GCGC	1 cut(s)	192
Kzo9I	GATC	4 cut(s)	53, 302, 364, 460
LpnPI	CCDG	5 cut(s)	54, 108, 297, 314, 421
Lsp1109I	GCAGC	1 cut(s)	184
MaeI	CTAG	1 cut(s)	464
MaeII	ACGT	1 cut(s)	257
MaeIII	GTNAC	3 cut(s)	164, 206, 410
MalI	GATC	4 cut(s)	55, 304, 366, 462
MboI	GATC	4 cut(s)	53, 302, 364, 460
MboII	GAAGA	3 cut(s)	254, 455, 458
MflI	RGATCY	1 cut(s)	302
MnlI	CCTC	8 cut(s)	91, 94, 141, 221, 230, 251, 419, 465
MroXI	GAANNNNTTC	1 cut(s)	324
MspA1I	CMGCKG	1 cut(s)	197
MspI	CCGG	1 cut(s)	408
MvnI	CGCG	2 cut(s)	186, 192
MwoI	GCNNNNNNNGC	1 cut(s)	95
NdeII	GATC	4 cut(s)	53, 302, 364, 460
NlaIII	CATG	1 cut(s)	120
NlaIV	GGNNCC	1 cut(s)	9
NmeAIII	GCCGAG	2 cut(s)	138, 192
NmuCI	GTSAC	1 cut(s)	164
PcsI	WCGNNNNNNNCGW	2 cut(s)	347, 456
PdmI	GAANNNNTTC	1 cut(s)	324
PkrI	GCNGC	2 cut(s)	196, 199
PpuMI	RGGWCCY	1 cut(s)	38
PsiI	TTATAA	1 cut(s)	484
Psp5II	RGGWCCY	1 cut(s)	38
PspEI	GGTNACC	1 cut(s)	164
PspN4I	GGNNCC	1 cut(s)	9
PspPI	GGNCC	1 cut(s)	38
PspPPI	RGGWCCY	1 cut(s)	38
PsuI	RGATCY	1 cut(s)	302
RsaI	GTAC	2 cut(s)	125, 392
RsaNI	GTAC	2 cut(s)	124, 391
SatI	GCNGC	2 cut(s)	195, 198
Sau3AI	GATC	4 cut(s)	53, 302, 364, 460
Sau96I	GGNCC	1 cut(s)	38
ScaI	AGTACT	1 cut(s)	125
SetI	ASST	7 cut(s)	27, 40, 100, 157, 213, 260, 471
SinI	GGWCC	1 cut(s)	38
SmlI	CTYRAG	1 cut(s)	150
SmoI	CTYRAG	1 cut(s)	150
SsiI	CCGC	4 cut(s)	5, 162, 195, 323
SspMI	CTAG	1 cut(s)	464
TaaI	ACNGT	3 cut(s)	18, 107, 128
TaiI	ACGT	1 cut(s)	260
TaqI	TCGA	4 cut(s)	52, 133, 243, 459
TatI	WGTACW	1 cut(s)	123
TauI	GCSGC	1 cut(s)	197
TseFI	GTSAC	1 cut(s)	164
TseI	GCWGC	1 cut(s)	197
Tsp45I	GTSAC	1 cut(s)	164
TspDTI	ATGAA	2 cut(s)	17, 362
TspGWI	ACGGA	5 cut(s)	357, 366, 372, 438, 467
VpaK11BI	GGWCC	1 cut(s)	38
XbaI	TCTAGA	1 cut(s)	463
XmnI	GAANNNNTTC	1 cut(s)	324
XspI	CTAG	1 cut(s)	464
ZrmI	AGTACT	1 cut(s)	125

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.