AT5G20940

Lysosomal beta glucosidase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0011666
Physical Location & Seq
Reverse (-)
7103927 .. 7106834
2908 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G20940.1

Sequence Viewer

Length: 1881 bp
ATGGGGAGTTCAAGTTACTTGCTACAAACGTTAGGCCTTCTGCTGCTCTGCTGTACCGTGGCAGCTAATAAAGTACCACTCGCAAACGCCAAGTATAAGGACCCAAAAGAGCCACTGGGAGTCAGGATCAAGAACCTGATGAGCCATATGACCCTTGAAGAGAAAATCGGACAGATGGTTCAGGTGGAACGTGTCAATGCCACAACCGAAGTCATGCAAAAGTACTTCGTCGGGAGTGTGTTTAGCGGAGGAGGGAGTGTGCCGAAGCCATATATCGGTCCTGAAGCTTGGGTGAACATGGTGAATGAGGTCCAAAAGAAAGCTCTTTCAACCCGCTTAGGTATTCCCATAATTTACGGGATCGATGCTGTTCATGGTCACAACACCGTGTACAACGCCACCATTTTCCCGCATAACGTAGGCCTCGGAGTCACCAGGGATCCTGGTCTTGTGAAGAGAATTGGTGAAGCAACTGCGCTTGAAGTTAGAGCAACAGGAATCCAATATGTCTTTGCTCCATGCATTGCAGTGTGTAGGGACCCTAGATGGGGAAGATGCTATGAGAGCTATAGTGAGGATCACAAAATAGTTCAACAGATGACTGAGATCATACCTGGTTTGCAAGGTGACCTTCCCACCGGTCAAAAGGGTGTTCCTTTCGTCGCTGGGAAGACCAAAGTCGCAGCCTGTGCTAAACACTTCGTTGGAGATGGAGGTACATTGAGAGGGATGAACGCGAACAACACGGTTATTAATTCAAATGGATTGCTGGGGATTCACATGCCAGCTTATCACGATGCGGTAAACAAGGGCGTTGCAACAGTTATGGTATCCTACTCGTCCATAAACGGGTTGAAAATGCATGCTAATAAGAAACTTATCACGGGTTTCCTCAAGAACAAACTCAAGTTCAGGGGCATTGTCATCTCCGACTATTTAGGTGTTGATCAGATCAACACACCTCTTGGTGCTAATTATTCACACTCTGTGTATGCTGCTACCACTGCGGGACTCGATATGTTCATGGGCTCATCAAACTTGACCAAATTAATCGACGAGCTAACCAGTCAGGTGAAGCGAAAATTCATCCCGATGAGCAGAATCGACGATGCTGTAAAGAGAATCTTAAGAGTCAAATTCACAATGGGGCTCTTTGAGAATCCCATTGCTGATCATAGCTTGGCCAAGAAGCTCGGTAGTAAGGAACACAGGGAACTGGCAAGGGAAGCAGTGAGGAAATCTCTCGTGTTGTTGAAGAATGGTGAAAACGCAGATAAGCCGTTGCTTCCTCTGCCAAAGAAAGCCAATAAGATCCTTGTCGCAGGAACACATGCTGATAACTTGGGATACCAATGTGGTGGCTGGACAATCACATGGCAAGGCCTTAATGGCAACAATCTCACCATTGGAACAACGATCCTCGCCGCAGTGAAGAAGACGGTGGATCCGAAGACGCAAGTTATCTACAATCAAAACCCCGACACCAATTTCGTCAAGGCCGGTGACTTCGATTACGCAATCGTGGCCGTCGGAGAGAAACCGTACGCGGAGGGATTCGGAGACAGTACGAACTTAACCATATCGGAACCAGGTCCGAGCACGATCGGGAACGTGTGCGCATCGGTGAAATGTGTGGTGGTGGTTGTATCGGGACGTCCGGTGGTGATGCAGATTTCGAACATCGATGCTCTAGTGGCGGCGTGGCTTCCGGGAACGGAAGGTCAAGGAGTGGCTGATGTTTTGTTCGGAGATTATGGATTCACCGGGAAATTGGCTCGGACGTGGTTTAAGACAGTGGATCAGTTGCCGATGAACGTTGGTGACCCGCATTACGACCCGTTGTACCCGTTTGGATTCGGGTTGATCACTAAACCAAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110
Pfam Domains
Protein Families
Glyco_hydro_3 Glyco_hydro_3_C

Protein Analysis

626

Amino Acids

67.65

Weight (kDa)

9.21

Isoelectric Point (pI)

23.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_3 PF00933 51 - 378 5.6e-70 Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C PF01915 415 - 621 7.8e-40 Glycosyl hydrolase family 3 C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011666)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G20940 AT5G20950 AT5G20950 AT5G20950
fragaria_vesca FvH4_3g26961
malus_domestica MD03G1161800.v1.1 MD11G1178000.v1.1
prunus_persica Prupe.6G150800_v2.0.a1 Prupe.6G150800_v2.0.a1
pyrus_communis pycom11g15210
rosa_chinensis RchiOBHm_Chr5g0049481
rosa_laevigata RLG00000034621
rosa_multiflora Rmu_sc0015493.1_g000005
rosa_roxburghii Rroxscaffold_1G00032210
rosa_rugosa Rorug05G0248700
rosa_samantha Rh5AG325200 Rh5BG336300 Rh5DG348500
rosa_wichuraiana Rw5G030700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1657
Acc16I TGCGCA 1 cut(s) 1618
AccII CGCG 2 cut(s) 737, 1547
AciI CCGC 9 cut(s) 246, 334, 410, 800, 1007, 1425, 1547, 1697, 1826
AclI AACGTT 2 cut(s) 29, 1815
AcoI YGGCCR 2 cut(s) 1182, 1524
AcsI RAATTY 2 cut(s) 1082, 1136
AcuI CTGAAG 1 cut(s) 303
AcyI GRCGYC 1 cut(s) 1654
AdeI CACNNNGTG 1 cut(s) 988
AfaI GTAC 8 cut(s) 55, 75, 224, 392, 718, 1544, 1567, 1844
AfiI CCNNNNNNNGG 4 cut(s) 275, 547, 548, 849
AflII CTTAAG 1 cut(s) 1126
AflIII ACRYGT 2 cut(s) 190, 1611
AgeI ACCGGT 1 cut(s) 638
AgsI TTSAA 8 cut(s) 12, 158, 330, 482, 593, 759, 856, 1255
AjiI CACGTC 1 cut(s) 1782
AjnI CCWGG 4 cut(s) 434, 442, 613, 1588
AloI GAACNNNNNNTCC 2 cut(s) 162, 194
AluBI AGCT 8 cut(s) 65, 287, 323, 567, 788, 1060, 1179, 1192
AluI AGCT 8 cut(s) 65, 287, 323, 567, 788, 1060, 1179, 1192
Alw21I GWGCWC 1 cut(s) 1601
Alw26I GTCTC 1 cut(s) 1554
AoxI GGCC 6 cut(s) 34, 421, 1182, 1381, 1497, 1524
ApeKI GCWGC 4 cut(s) 43, 62, 683, 995
ApoI RAATTY 2 cut(s) 1082, 1136
ArsI GACNNNNNNTTYG 2 cut(s) 1472, 1504
AseI ATTAAT 2 cut(s) 753, 1049
AsiGI ACCGGT 1 cut(s) 638
AspLEI GCGC 2 cut(s) 478, 1619
AspS9I GGNCC 5 cut(s) 100, 278, 310, 538, 1592
AsuC2I CCSGG 2 cut(s) 1710, 1765
AsuII TTCGAA 1 cut(s) 1676
AvaII GGWCC 5 cut(s) 100, 278, 310, 538, 1592
BaeI ACNNNNGTAYC 2 cut(s) 1339, 1372
BalI TGGCCA 1 cut(s) 1184
BamHI GGATCC 2 cut(s) 439, 1444
BanII GRGCYC 2 cut(s) 1031, 1152
BauI CACGAG 1 cut(s) 1244
BbsI GAAGAC 3 cut(s) 677, 1442, 1457
Bbv12I GWGCWC 1 cut(s) 1601
BbvI GCAGC 4 cut(s) 30, 74, 695, 982
BccI CCATC 3 cut(s) 169, 540, 704
BceAI ACGGC 2 cut(s) 1264, 1511
BciT130I CCWGG 4 cut(s) 436, 444, 615, 1590
BciVI GTATCC 2 cut(s) 841, 1340
BclI TGATCA 3 cut(s) 946, 1171, 1863
BcnI CCSGG 2 cut(s) 1710, 1765
BcoDI GTCTC 1 cut(s) 1554
BfaI CTAG 2 cut(s) 543, 1691
BfmI CTRYAG 1 cut(s) 568
BfrI CTTAAG 1 cut(s) 1126
BfuI GTATCC 2 cut(s) 841, 1340
BglI GCCNNNNNGGC 1 cut(s) 1389
BisI GCNGC 6 cut(s) 44, 63, 684, 996, 1425, 1698
BlsI GCNGC 6 cut(s) 45, 64, 685, 997, 1426, 1699
BmcAI AGTACT 1 cut(s) 224
Bme1390I CCNGG 6 cut(s) 436, 444, 615, 1590, 1710, 1765
Bme18I GGWCC 5 cut(s) 100, 278, 310, 538, 1592
BmgBI CACGTC 1 cut(s) 1782
BmgT120I GGNCC 5 cut(s) 100, 278, 310, 538, 1592
BmiI GGNNCC 6 cut(s) 102, 441, 539, 540, 1446, 1587
BmrFI CCNGG 6 cut(s) 436, 444, 615, 1590, 1710, 1765
BmrI ACTGGG 1 cut(s) 125
BmsI GCATC 7 cut(s) 355, 545, 787, 1099, 1628, 1656, 1675
BmuI ACTGGG 1 cut(s) 125
BoxI GACNNNNGTC 1 cut(s) 677
BpiI GAAGAC 3 cut(s) 677, 1442, 1457
BplI GAGNNNNNCTC 2 cut(s) 1225, 1257
Bpu10I CCTNAGC 1 cut(s) 337
Bpu14I TTCGAA 1 cut(s) 1676
BpuEI CTTGAG 2 cut(s) 878, 890
BpuMI CCSGG 2 cut(s) 1710, 1765
Bsa29I ATCGAT 2 cut(s) 363, 1683
BsaHI GRCGYC 1 cut(s) 1654
BsaJI CCNNGG 3 cut(s) 57, 424, 435
BsaWI WCCGGW 2 cut(s) 638, 1657
BsaXI ACNNNNNCTCC 3 cut(s) 28, 243, 273
Bsc4I CCNNNNNNNGG 4 cut(s) 275, 547, 548, 849
Bse118I RCCGGY 2 cut(s) 638, 1499
Bse1I ACTGG 3 cut(s) 120, 1065, 1221
Bse3DI GCAATG 2 cut(s) 522, 1164
BseBI CCWGG 4 cut(s) 436, 444, 615, 1590
BseCI ATCGAT 2 cut(s) 363, 1683
BseDI CCNNGG 3 cut(s) 57, 424, 435
BseGI GGATG 2 cut(s) 735, 1086
BseLI CCNNNNNNNGG 4 cut(s) 275, 547, 548, 849
BseMI GCAATG 2 cut(s) 522, 1164
BseMII CTCAG 1 cut(s) 594
BseNI ACTGG 3 cut(s) 120, 1065, 1221
BseRI GAGGAG 1 cut(s) 264
BseXI GCAGC 4 cut(s) 30, 74, 695, 982
BseYI CCCAGC 2 cut(s) 665, 769
Bsh1236I CGCG 2 cut(s) 737, 1547
Bsh1285I CGRYCG 1 cut(s) 1605
BshFI GGCC 6 cut(s) 36, 423, 1184, 1383, 1499, 1526
BshTI ACCGGT 1 cut(s) 638
BshVI ATCGAT 2 cut(s) 363, 1683
BsiEI CGRYCG 1 cut(s) 1605
BsiHKAI GWGCWC 1 cut(s) 1601
BsiSI CCGG 5 cut(s) 639, 1500, 1658, 1709, 1764
BsiWI CGTACG 1 cut(s) 1542
BslFI GGGAC 3 cut(s) 551, 1023, 1665
BslI CCNNNNNNNGG 4 cut(s) 275, 547, 548, 849
BsmAI GTCTC 1 cut(s) 1554
BsmFI GGGAC 3 cut(s) 551, 1023, 1665
BsnI GGCC 6 cut(s) 36, 423, 1184, 1383, 1499, 1526
Bsp119I TTCGAA 1 cut(s) 1676
Bsp1286I GDGCHC 3 cut(s) 1031, 1152, 1601
Bsp1407I TGTACA 1 cut(s) 390
BspACI CCGC 9 cut(s) 246, 334, 410, 800, 1007, 1425, 1547, 1697, 1826
BspANI GGCC 6 cut(s) 36, 423, 1184, 1383, 1499, 1526
BspCNI CTCAG 1 cut(s) 595
BspDI ATCGAT 2 cut(s) 363, 1683
BspFNI CGCG 2 cut(s) 737, 1547
BspLI GGNNCC 6 cut(s) 102, 441, 539, 540, 1446, 1587
BspT104I TTCGAA 1 cut(s) 1676
BspTI CTTAAG 1 cut(s) 1126
BsrDI GCAATG 2 cut(s) 522, 1164
BsrFI RCCGGY 2 cut(s) 638, 1499
BsrGI TGTACA 1 cut(s) 390
BsrI ACTGG 3 cut(s) 120, 1065, 1221
BssAI RCCGGY 2 cut(s) 638, 1499
BssECI CCNNGG 3 cut(s) 57, 424, 435
BssNI GRCGYC 1 cut(s) 1654
BssSI CACGAG 1 cut(s) 1244
Bst2BI CACGAG 1 cut(s) 1244
Bst2UI CCWGG 4 cut(s) 436, 444, 615, 1590
Bst4CI ACNGT 8 cut(s) 58, 388, 748, 823, 1441, 1542, 1565, 1795
Bst6I CTCTTC 2 cut(s) 153, 449
BstACI GRCGYC 1 cut(s) 1654
BstAFI CTTAAG 1 cut(s) 1126
BstAPI GCANNNNNTGC 1 cut(s) 689
BstAUI TGTACA 1 cut(s) 390
BstBI TTCGAA 1 cut(s) 1676
BstC8I GCNNGC 2 cut(s) 786, 864
BstDEI CTNAG 2 cut(s) 337, 603
BstDSI CCRYGG 1 cut(s) 57
BstEII GGTNACC 2 cut(s) 626, 1820
BstF5I GGATG 2 cut(s) 735, 1086
BstFNI CGCG 2 cut(s) 737, 1547
BstHHI GCGC 2 cut(s) 478, 1619
BstMAI GTCTC 1 cut(s) 1554
BstMCI CGRYCG 1 cut(s) 1605
BstMWI GCNNNNNNNGC 8 cut(s) 564, 689, 1004, 1226, 1291, 1389, 1523, 1694
BstNI CCWGG 4 cut(s) 436, 444, 615, 1590
BstNSI RCATGY 3 cut(s) 784, 866, 1334
BstPAI GACNNNNGTC 1 cut(s) 677
BstPI GGTNACC 2 cut(s) 626, 1820
BstSCI CCNGG 6 cut(s) 434, 442, 613, 1588, 1708, 1763
BstSFI CTRYAG 1 cut(s) 568
BstUI CGCG 2 cut(s) 737, 1547
BstV1I GCAGC 4 cut(s) 30, 74, 695, 982
BstV2I GAAGAC 3 cut(s) 677, 1442, 1457
BstX2I RGATCY 3 cut(s) 439, 1311, 1444
BstXI CCANNNNNNTGG 1 cut(s) 1358
BstYI RGATCY 3 cut(s) 439, 1311, 1444
Bsu15I ATCGAT 2 cut(s) 363, 1683
BsuI GTATCC 2 cut(s) 841, 1340
BsuRI GGCC 6 cut(s) 36, 423, 1184, 1383, 1499, 1526
BsuTUI ATCGAT 2 cut(s) 363, 1683
BtgI CCRYGG 1 cut(s) 57
BtrI CACGTC 1 cut(s) 1782
BtsCI GGATG 2 cut(s) 735, 1086
BtsI GCAGTG 4 cut(s) 534, 1002, 1236, 1434
BtsIMutI CAGTG 6 cut(s) 113, 534, 1002, 1236, 1434, 1800
Cac8I GCNNGC 2 cut(s) 786, 864
CfoI GCGC 2 cut(s) 478, 1619
Cfr10I RCCGGY 2 cut(s) 638, 1499
Cfr13I GGNCC 5 cut(s) 100, 278, 310, 538, 1592
ClaI ATCGAT 2 cut(s) 363, 1683
CseI GACGC 1 cut(s) 1462
CsiI ACCWGGT 2 cut(s) 613, 1588
Csp6I GTAC 8 cut(s) 54, 74, 223, 391, 717, 1543, 1566, 1843
CspAI ACCGGT 1 cut(s) 638
CviAII CATG 9 cut(s) 214, 298, 374, 519, 781, 863, 1024, 1331, 1374
CviQI GTAC 8 cut(s) 54, 74, 223, 391, 717, 1543, 1566, 1843
DdeI CTNAG 2 cut(s) 337, 603
DraIII CACNNNGTG 1 cut(s) 988
EaeI YGGCCR 2 cut(s) 1182, 1524
Eam1104I CTCTTC 2 cut(s) 153, 449
EarI CTCTTC 2 cut(s) 153, 449
Eco147I AGGCCT 3 cut(s) 36, 423, 1383
Eco24I GRGCYC 2 cut(s) 1031, 1152
Eco47I GGWCC 5 cut(s) 100, 278, 310, 538, 1592
Eco57I CTGAAG 1 cut(s) 303
Eco91I GGTNACC 2 cut(s) 626, 1820
EcoO109I RGGNCCY 2 cut(s) 100, 538
EcoO65I GGTNACC 2 cut(s) 626, 1820
EcoRII CCWGG 4 cut(s) 434, 442, 613, 1588
EcoT22I ATGCAT 2 cut(s) 524, 864
EcoT38I GRGCYC 2 cut(s) 1031, 1152
FaeI CATG 9 cut(s) 217, 301, 377, 522, 784, 866, 1027, 1334, 1377
FalI AAGNNNNNCTT 4 cut(s) 615, 647, 1109, 1141
FaqI GGGAC 3 cut(s) 551, 1023, 1665
FatI CATG 9 cut(s) 213, 297, 373, 518, 780, 862, 1023, 1330, 1373
FauI CCCGC 4 cut(s) 341, 417, 1000, 1833
FauNDI CATATG 1 cut(s) 147
FbaI TGATCA 3 cut(s) 946, 1171, 1863
Fnu4HI GCNGC 6 cut(s) 44, 63, 684, 996, 1425, 1698
FokI GGATG 2 cut(s) 742, 1073
FriOI GRGCYC 2 cut(s) 1031, 1152
Fsp4HI GCNGC 6 cut(s) 44, 63, 684, 996, 1425, 1698
FspAI RTGCGCAY 1 cut(s) 1618
FspBI CTAG 2 cut(s) 543, 1691
FspI TGCGCA 1 cut(s) 1618
GlaI GCGC 2 cut(s) 477, 1618
GluI GCNGC 6 cut(s) 44, 63, 684, 996, 1425, 1698
GsaI CCCAGC 2 cut(s) 669, 773
HaeIII GGCC 6 cut(s) 36, 423, 1184, 1383, 1499, 1526
HapII CCGG 5 cut(s) 639, 1500, 1658, 1709, 1764
HgaI GACGC 1 cut(s) 1462
HhaI GCGC 2 cut(s) 478, 1619
Hin1I GRCGYC 1 cut(s) 1654
Hin1II CATG 9 cut(s) 217, 301, 377, 522, 784, 866, 1027, 1334, 1377
Hin6I GCGC 2 cut(s) 476, 1617
HinP1I GCGC 2 cut(s) 476, 1617
HindIII AAGCTT 1 cut(s) 285
HpaII CCGG 5 cut(s) 639, 1500, 1658, 1709, 1764
Hpy166II GTNNAC 3 cut(s) 295, 391, 805
Hpy188III TCNNGA 9 cut(s) 124, 130, 232, 281, 794, 895, 1090, 1606, 1650
Hpy8I GTNNAC 3 cut(s) 295, 391, 805
Hpy99I CGWCG 5 cut(s) 233, 665, 1058, 1109, 1532
HpyAV CCTTC 3 cut(s) 47, 641, 1712
HpyCH4III ACNGT 8 cut(s) 58, 388, 748, 823, 1441, 1542, 1565, 1795
HpyCH4IV ACGT 7 cut(s) 29, 190, 417, 1611, 1654, 1781, 1815
HpyCH4V TGCA 7 cut(s) 217, 522, 527, 622, 818, 862, 1669
HpyF10VI GCNNNNNNNGC 8 cut(s) 564, 689, 1004, 1226, 1291, 1389, 1523, 1694
HpyF3I CTNAG 2 cut(s) 337, 603
HpySE526I ACGT 7 cut(s) 29, 190, 417, 1611, 1654, 1781, 1815
Hsp92I GRCGYC 1 cut(s) 1654
Hsp92II CATG 9 cut(s) 217, 301, 377, 522, 784, 866, 1027, 1334, 1377
HspAI GCGC 2 cut(s) 476, 1617
KflI GGGWCCC 1 cut(s) 538
Ksp22I TGATCA 3 cut(s) 946, 1171, 1863
LmnI GCTCC 1 cut(s) 520
Lsp1109I GCAGC 4 cut(s) 30, 74, 695, 982
LweI GCATC 7 cut(s) 355, 545, 787, 1099, 1628, 1656, 1675
MabI ACCWGGT 2 cut(s) 613, 1588
MaeI CTAG 2 cut(s) 543, 1691
MaeII ACGT 7 cut(s) 29, 190, 417, 1611, 1654, 1781, 1815
MaeIII GTNAC 6 cut(s) 14, 377, 430, 626, 1502, 1820
MboII GAAGA 8 cut(s) 170, 466, 564, 682, 1267, 1444, 1447, 1462
MflI RGATCY 3 cut(s) 439, 1311, 1444
MhlI GDGCHC 3 cut(s) 1031, 1152, 1601
MlsI TGGCCA 1 cut(s) 1184
MluNI TGGCCA 1 cut(s) 1184
MlyI GAGTC 4 cut(s) 129, 438, 1005, 1140
MmeI TCCRAC 3 cut(s) 685, 954, 1510
Mox20I TGGCCA 1 cut(s) 1184
Mph1103I ATGCAT 2 cut(s) 524, 864
MscI TGGCCA 1 cut(s) 1184
MseI TTAA 7 cut(s) 753, 1049, 1127, 1386, 1574, 1788, 1879
MslI CAYNNNNRTG 2 cut(s) 527, 1091
Msp20I TGGCCA 1 cut(s) 1184
MspCI CTTAAG 1 cut(s) 1126
MspI CCGG 5 cut(s) 639, 1500, 1658, 1709, 1764
MspR9I CCNGG 6 cut(s) 436, 444, 615, 1590, 1710, 1765
MvaI CCWGG 4 cut(s) 436, 444, 615, 1590
MvnI CGCG 2 cut(s) 737, 1547
MwoI GCNNNNNNNGC 8 cut(s) 564, 689, 1004, 1226, 1291, 1389, 1523, 1694
NciI CCSGG 2 cut(s) 1710, 1765
NdeI CATATG 1 cut(s) 147
NlaIII CATG 9 cut(s) 217, 301, 377, 522, 784, 866, 1027, 1334, 1377
NlaIV GGNNCC 6 cut(s) 102, 441, 539, 540, 1446, 1587
NmuCI GTSAC 5 cut(s) 377, 430, 626, 1502, 1820
NsbI TGCGCA 1 cut(s) 1618
NsiI ATGCAT 2 cut(s) 524, 864
NspI RCATGY 3 cut(s) 784, 866, 1334
NspV TTCGAA 1 cut(s) 1676
PaeI GCATGC 1 cut(s) 866
PceI AGGCCT 3 cut(s) 36, 423, 1383
PcsI WCGNNNNNNNCGW 1 cut(s) 1445
PfeI GAWTC 8 cut(s) 498, 775, 1101, 1122, 1159, 1554, 1758, 1854
Pfl23II CGTACG 1 cut(s) 1542
PfoI TCCNGGA 1 cut(s) 1708
PinAI ACCGGT 1 cut(s) 638
PkrI GCNGC 6 cut(s) 45, 64, 685, 997, 1426, 1699
Ple19I CGATCG 1 cut(s) 1605
PleI GAGTC 4 cut(s) 128, 437, 1005, 1139
PpsI GAGTC 4 cut(s) 128, 437, 1005, 1139
PpuMI RGGWCCY 2 cut(s) 100, 538
PshAI GACNNNNGTC 1 cut(s) 677
PshBI ATTAAT 2 cut(s) 753, 1049
Psp1406I AACGTT 2 cut(s) 29, 1815
Psp5II RGGWCCY 2 cut(s) 100, 538
Psp6I CCWGG 4 cut(s) 434, 442, 613, 1588
PspEI GGTNACC 2 cut(s) 626, 1820
PspFI CCCAGC 2 cut(s) 665, 769
PspGI CCWGG 4 cut(s) 434, 442, 613, 1588
PspLI CGTACG 1 cut(s) 1542
PspN4I GGNNCC 6 cut(s) 102, 441, 539, 540, 1446, 1587
PspPI GGNCC 5 cut(s) 100, 278, 310, 538, 1592
PspPPI RGGWCCY 2 cut(s) 100, 538
PsuI RGATCY 3 cut(s) 439, 1311, 1444
PvuI CGATCG 1 cut(s) 1605
RsaI GTAC 8 cut(s) 55, 75, 224, 392, 718, 1544, 1567, 1844
RsaNI GTAC 8 cut(s) 54, 74, 223, 391, 717, 1543, 1566, 1843
RseI CAYNNNNRTG 2 cut(s) 527, 1091
SaqAI TTAA 7 cut(s) 753, 1049, 1127, 1386, 1574, 1788, 1879
SatI GCNGC 6 cut(s) 44, 63, 684, 996, 1425, 1698
Sau96I GGNCC 5 cut(s) 100, 278, 310, 538, 1592
ScaI AGTACT 1 cut(s) 224
SchI GAGTC 4 cut(s) 129, 438, 1005, 1140
ScrFI CCNGG 6 cut(s) 436, 444, 615, 1590, 1710, 1765
SduI GDGCHC 3 cut(s) 1031, 1152, 1601
SexAI ACCWGGT 2 cut(s) 613, 1588
SfaNI GCATC 7 cut(s) 355, 545, 787, 1099, 1628, 1656, 1675
SfcI CTRYAG 1 cut(s) 568
SfuI TTCGAA 1 cut(s) 1676
SinI GGWCC 5 cut(s) 100, 278, 310, 538, 1592
SmiMI CAYNNNNRTG 2 cut(s) 527, 1091
SmlI CTYRAG 3 cut(s) 893, 905, 1126
SmoI CTYRAG 3 cut(s) 893, 905, 1126
SphI GCATGC 1 cut(s) 866
SseBI AGGCCT 3 cut(s) 36, 423, 1383
SsiI CCGC 9 cut(s) 246, 334, 410, 800, 1007, 1425, 1547, 1697, 1826
SspMI CTAG 2 cut(s) 543, 1691
StuI AGGCCT 3 cut(s) 36, 423, 1383
StyD4I CCNGG 6 cut(s) 434, 442, 613, 1588, 1708, 1763
TaaI ACNGT 8 cut(s) 58, 388, 748, 823, 1441, 1542, 1565, 1795
TaiI ACGT 7 cut(s) 32, 193, 420, 1614, 1657, 1784, 1818
TaqI TCGA 7 cut(s) 363, 1014, 1053, 1104, 1509, 1676, 1683
TaqII GACCGA 1 cut(s) 266
TatI WGTACW 2 cut(s) 222, 390
TauI GCSGC 2 cut(s) 1427, 1700
TfiI GAWTC 8 cut(s) 498, 775, 1101, 1122, 1159, 1554, 1758, 1854
Tru1I TTAA 7 cut(s) 753, 1049, 1127, 1386, 1574, 1788, 1879
Tru9I TTAA 7 cut(s) 753, 1049, 1127, 1386, 1574, 1788, 1879
TscAI CASTG 6 cut(s) 120, 534, 1009, 1236, 1434, 1800
TseFI GTSAC 5 cut(s) 377, 430, 626, 1502, 1820
TseI GCWGC 4 cut(s) 43, 62, 683, 995
Tsp45I GTSAC 5 cut(s) 377, 430, 626, 1502, 1820
TspDTI ATGAA 5 cut(s) 362, 746, 1012, 1075, 1826
TspGWI ACGGA 1 cut(s) 1730
TspRI CASTG 6 cut(s) 120, 534, 1009, 1236, 1434, 1800
Vha464I CTTAAG 1 cut(s) 1126
VpaK11BI GGWCC 5 cut(s) 100, 278, 310, 538, 1592
VspI ATTAAT 2 cut(s) 753, 1049
XapI RAATTY 2 cut(s) 1082, 1136
XceI RCATGY 3 cut(s) 784, 866, 1334
XspI CTAG 2 cut(s) 543, 1691
ZraI GACGTC 1 cut(s) 1655
ZrmI AGTACT 1 cut(s) 224
Zsp2I ATGCAT 2 cut(s) 524, 864
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.