Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0022011

Physical Location & Seq

Genomic Coordinates Reverse (-)

21414935 .. 21417616

Gene Structure 2682 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G52850.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2682 bp

ATGACGAGCAAAGTAGTAGCAGCAGCAGCTTCTGCATTTCTCTCTCGCACTAACGAATTGGGTAATCTTCAAAAATCATGTATTCGGATTCTCTCCTTCTGCGAATCGAATTCATCACGTATTGGTTTACACATCCACTGCCCAGTAATAAAGTTTGGTCTTTTAGAGAATCTCGACTTATGCAACAATCTTTTGAGTCTTTACTTAAAAACCGATGGTATATGGAATGCACGTAAACTGTTCGATGAAATGTCTCACAGAACTGTTTTCGCATGGACAGTTATGATCTCTGCTTTTACCAAGAGCCAAGAGTTTGCATCAGCGCTTTCGTTGTTTGAGGAAATGATGGCTTCGGGAACACACCCGAACGAATTCACTTTTTCCTCGGTGGTAAGATCTTGTGCTGGTTTAAGAGATATTAGTTACGGAGGTCGAGTTCATGGCTCTGTTATAAAGACTGGGTTTGAGGGAAACTCAGTTGTTGGAAGCAGCTTGAGTGATTTGTATTCTAAGTGTGGGCAGTTTAAGGAAGCTTGTGAGCTATTTAGTTCTCTTCAGAACGCGGATACTATCTCGTGGACGATGATGATATCTTCTTTAGTGGGAGCTCGTAAATGGAGAGAAGCGTTGCAGTTTTACTCTGAGATGGTTAAAGCTGGTGTTCCTCCTAACGAGTTCACATTTGTTAAGCTTTTAGGTGCCTCTTCCTTTCTCGGTTTGGAGTTTGGTAAAACGATTCATAGCAACATAATTGTCAGGGGAATTCCGCTGAATGTGGTATTGAAGACATCTCTCGTTGATTTCTACTCGCAGTTTTCTAAAATGGAGGATGCTGTGAGGGTGTTGAATTCGAGTGGAGAACAAGACGTGTTTCTTTGGACGTCTGTGGTATCAGGGTTTGTAAGGAACTTGAGAGCCAAGGAAGCTGTTGGCACGTTTCTTGAGATGCGAAGTTTGGGTTTGCAACCAAATAACTTCACATACTCTGCAATCTTGAGCTTGTGTTCTGCTGTTCGTTCGCTGGATTTTGGGAAACAGATTCACTCACAGACAATTAAGGTTGGCTTCGAGGATAGCACTGATGTTGGAAATGCACTTGTAGATATGTATATGAAGTGCTCGGCATCAGAAGTAGAAGCTTCGAGAGTCTTTGGAGCAATGGTTTCACCAAACGTCGTCTCTTGGACAACGTTAATCTTAGGTCTTGTTGATCACGGGTTCGTGCAAGATTGTTTTGGACTGCTGATGGAGATGGTAAAACGAGAGGTAGAACCCAATGTTGTTACCCTATCCGGTGTTCTCCGAGCCTGTAGCAAATTGAGACATGTAAGGCGGGTATTAGAGATTCATGCATATCTACTCAGAAGACACGTAGATGGTGAAATGGTAGTAGGGAATTCACTTGTCGATGCATATGCCAGCTCGAGGAAGGTGGATTATGCCTGGAATGTGATTAGGTCGATGAAAAGGAGGGATAATATCACATACACGAGCTTGGTAACAAGGTTTAATGAGTTGGGCAAGCATGAAATGGCACTGAGTGTCATCAATTATATGTATGGTGATGGAATCAGAATGGATCAGTTAAGCTTACCCGGGTTTATCTCAGCTTCAGCCAACTTGGGCGCTCTTGAAACTGGGAAACATCTTCATTGTTACTCCGTGAAATCCGGGTTTTCTGGTGCGGCTTCGGTTTTAAATAGTCTCGTTGACATGTATAGTAAATGTGGTAGCTTGGAAGATGCAAAGAAAGTTTTTGAAGAAATAGCTACGCCTGATGTGGTTTCTTGGAACGGGTTGGTATCTGGTTTGGCATCAAACGGTTTTATTTCATCTGCTCTATCTGCATTTGAGGAGATGAGGATGAAAGAAACCGAGCCCGATTCAGTAACGTTCCTGATATTGCTCTCTGCTTGTAGTAATGGAAGATTGACTGACTTGGGCCTTGAGTATTTCCAAGTAATGAAAAAGATTTATAACATTGAGCCACAGGTAGAGCACTATGTTCATCTAGTTGGTATCTTAGGTCGTGCTGGACGGCTAGAGGAAGCAACAGGAGTTGTAGAGACAATGCATTTAAAACCAAATGCTATGATCTTCAAAACGTTGTTGAGAGCTTGTAGATACCGTGGAAATCTGTCTTTAGGAGAAGATATGGCTAACAAAGGCTTAGCACTTGCACCATCTGATCCAGCCTTGTACATTCTTTTGGCTGACCTATACGACGAATCTGGAAAACCAGAGTTAGCTCAAAAGACTCGAAATTTGATGACTGAGAAGCGCTTGAGTAAAAAGCTAGGCAAGAGCACTGTGGAGGTTCAAGGAAAAGTTCACAGCTTTGTCAGTGAGGATGTTACTAGAGTGGATAAAACGAATGGGATTTACGCAGAGATAGAATCGATAAAGGAAGAGATCAAAAGGTTTGGTTCACCATACAGAGGTAATGAAAACGCAAGCTTTCACAGTGCAAAACAAGCTGTTGTGTATGGTTTTATCTATGCGTCACCAGAAGCCCCGGTTCATGTTGTTAAGAACAAAATTCTGTGTAAGGACTGCCATGAGTTCGTGTCCATCTTGACTCGGTTAGTCGATAAGAAAATAACTGTAAGAGATGGGAATCAGGTTCATATCTTTAAGAATGGCGAATGTTCTTGCAAAAGGGAAGAAACATCATTTGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

893

Amino Acids

98.84

Weight (kDa)

8.12

Isoelectric Point (pI)

39.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	88 - 135	1.4e-10	PPR repeat family
PPR_2	PF13041	189 - 232	1.2e-10	PPR repeat family
PPR_2	PF13041	289 - 335	1e-08	PPR repeat family
PPR_2	PF13041	390 - 439	3e-11	PPR repeat family
PPR_2	PF13041	592 - 641	1.4e-10	PPR repeat family
DYW_deaminase	PF14432	821 - 886	3.9e-18	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Publication-ready

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Orthologous Genes (Group: OG0022011)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52850
malus_domestica	MD07G1280500.v1.1
prunus_persica	Prupe.2G302700_v2.0.a1
pyrus_communis	pycom07g25510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	452, 1977
AatII	GACGTC	1 cut(s)	884
AccB1I	GGYRCC	1 cut(s)	698
AccII	CGCG	1 cut(s)	563
AciI	CCGC	4 cut(s)	563, 767, 1333, 1685
AclI	AACGTT	3 cut(s)	1190, 1892, 2105
AclWI	GGATC	2 cut(s)	1587, 2183
AcsI	RAATTY	7 cut(s)	109, 371, 762, 847, 1396, 2263, 2538
AcuI	CTGAAG	2 cut(s)	539, 1596
AcyI	GRCGYC	1 cut(s)	881
AdeI	CACNNNGTG	1 cut(s)	1541
AfaI	GTAC	1 cut(s)	2201
AfeI	AGCGCT	2 cut(s)	324, 2282
AfiI	CCNNNNNNNGG	2 cut(s)	1425, 2438
AflIII	ACRYGT	4 cut(s)	867, 1324, 1369, 1713
AgsI	TTSAA	7 cut(s)	71, 784, 847, 1634, 1760, 2101, 2321
AjiI	CACGTC	1 cut(s)	868
AjnI	CCWGG	1 cut(s)	1442
AloI	GAACNNNNNNTCC	2 cut(s)	420, 452
Alw21I	GWGCWC	4 cut(s)	610, 1121, 2001, 2309
Alw26I	GTCTC	5 cut(s)	258, 1183, 1315, 1709, 2060
AlwI	GGATC	2 cut(s)	1587, 2183
AlwNI	CAGNNNCTG	1 cut(s)	32
Ama87I	CYCGRG	2 cut(s)	1423, 1595
Aor51HI	AGCGCT	2 cut(s)	324, 2282
AoxI	GGCC	1 cut(s)	1942
ApeKI	GCWGC	4 cut(s)	20, 23, 26, 489
ApoI	RAATTY	7 cut(s)	109, 371, 762, 847, 1396, 2263, 2538
ArsI	GACNNNNNNTTYG	2 cut(s)	2248, 2280
Asp700I	GAANNNNTTC	1 cut(s)	371
AspLEI	GCGC	3 cut(s)	325, 1628, 2283
AspS9I	GGNCC	1 cut(s)	1942
AsuC2I	CCSGG	4 cut(s)	1596, 1597, 1672, 2516
AsuHPI	GGTGA	5 cut(s)	1158, 1391, 1574, 2421, 2496
AvaI	CYCGRG	2 cut(s)	1423, 1595
BanI	GGYRCC	1 cut(s)	698
BanII	GRGCYC	2 cut(s)	610, 1881
BauI	CACGAG	2 cut(s)	574, 1489
BbsI	GAAGAC	2 cut(s)	791, 1372
Bbv12I	GWGCWC	4 cut(s)	610, 1121, 2001, 2309
BbvI	GCAGC	4 cut(s)	32, 35, 38, 501
BceAI	ACGGC	1 cut(s)	2054
BcgI	CGANNNNNNTGC	2 cut(s)	1397, 1431
BciT130I	CCWGG	1 cut(s)	1444
BciVI	GTATCC	1 cut(s)	559
BclI	TGATCA	1 cut(s)	1210
BcnI	CCSGG	4 cut(s)	1596, 1597, 1672, 2516
BcoDI	GTCTC	5 cut(s)	258, 1183, 1315, 1709, 2060
BfaI	CTAG	4 cut(s)	2012, 2042, 2297, 2358
BfmI	CTRYAG	1 cut(s)	1309
BfoI	RGCGCY	3 cut(s)	326, 1629, 2284
BfuI	GTATCC	1 cut(s)	559
BglII	AGATCT	1 cut(s)	395
BisI	GCNGC	5 cut(s)	21, 24, 27, 490, 1686
BlpI	GCTNAGC	1 cut(s)	2170
BlsI	GCNGC	5 cut(s)	22, 25, 28, 491, 1687
Bme1390I	CCNGG	5 cut(s)	1444, 1596, 1597, 1672, 2516
BmeT110I	CYCGRG	2 cut(s)	1423, 1595
BmgBI	CACGTC	1 cut(s)	868
BmgT120I	GGNCC	1 cut(s)	1942
BmiI	GGNNCC	1 cut(s)	700
BmrFI	CCNGG	5 cut(s)	1444, 1596, 1597, 1672, 2516
BmrI	ACTGGG	3 cut(s)	137, 468, 1647
BmsI	GCATC	7 cut(s)	326, 820, 936, 1133, 1399, 1732, 1823
BmuI	ACTGGG	3 cut(s)	137, 468, 1647
BpiI	GAAGAC	2 cut(s)	791, 1372
BplI	GAGNNNNNCTC	2 cut(s)	458, 490
Bpu1102I	GCTNAGC	1 cut(s)	2170
BpuEI	CTTGAG	6 cut(s)	514, 931, 962, 1015, 1967, 2305
BpuMI	CCSGG	4 cut(s)	1596, 1597, 1672, 2516
Bsa29I	ATCGAT	1 cut(s)	2399
BsaAI	YACGTR	3 cut(s)	119, 233, 1372
BsaBI	GATNNNNATC	1 cut(s)	2616
BsaHI	GRCGYC	1 cut(s)	881
BsaJI	CCNNGG	5 cut(s)	384, 918, 1595, 2128, 2514
BsaWI	WCCGGW	1 cut(s)	1292
BsaXI	ACNNNNNCTCC	4 cut(s)	420, 450, 1146, 1176
Bsc4I	CCNNNNNNNGG	2 cut(s)	1425, 2438
Bse1I	ACTGG	3 cut(s)	143, 463, 1642
Bse3DI	GCAATG	1 cut(s)	1164
Bse8I	GATNNNNATC	1 cut(s)	2616
BseBI	CCWGG	1 cut(s)	1444
BseCI	ATCGAT	1 cut(s)	2399
BseDI	CCNNGG	5 cut(s)	384, 918, 1595, 2128, 2514
BseGI	GGATG	4 cut(s)	132, 835, 1869, 2356
BseJI	GATNNNNATC	1 cut(s)	2616
BseLI	CCNNNNNNNGG	2 cut(s)	1425, 2438
BseMI	GCAATG	1 cut(s)	1164
BseMII	CTCAG	6 cut(s)	489, 633, 1375, 1529, 1620, 2265
BseNI	ACTGG	3 cut(s)	143, 463, 1642
BseRI	GAGGAG	1 cut(s)	1868
BseXI	GCAGC	4 cut(s)	32, 35, 38, 501
Bsh1236I	CGCG	1 cut(s)	563
BshFI	GGCC	1 cut(s)	1944
BshNI	GGYRCC	1 cut(s)	698
BshVI	ATCGAT	1 cut(s)	2399
BsiHKAI	GWGCWC	4 cut(s)	610, 1121, 2001, 2309
BsiHKCI	CYCGRG	2 cut(s)	1423, 1595
BsiSI	CCGG	4 cut(s)	1293, 1596, 1671, 2516
BslI	CCNNNNNNNGG	2 cut(s)	1425, 2438
BsmAI	GTCTC	5 cut(s)	258, 1183, 1315, 1709, 2060
BsmBI	CGTCTC	1 cut(s)	1183
BsmI	GAATGC	1 cut(s)	232
BsnI	GGCC	1 cut(s)	1944
BsoBI	CYCGRG	2 cut(s)	1423, 1595
Bsp1286I	GDGCHC	5 cut(s)	610, 1121, 1881, 2001, 2309
Bsp1407I	TGTACA	1 cut(s)	2199
Bsp143I	GATC	7 cut(s)	285, 395, 1210, 1579, 2094, 2188, 2412
Bsp1720I	GCTNAGC	1 cut(s)	2170
BspACI	CCGC	4 cut(s)	563, 767, 1333, 1685
BspANI	GGCC	1 cut(s)	1944
BspCNI	CTCAG	6 cut(s)	488, 634, 1374, 1530, 1619, 2266
BspDI	ATCGAT	1 cut(s)	2399
BspFNI	CGCG	1 cut(s)	563
BspLI	GGNNCC	1 cut(s)	700
BspPI	GGATC	2 cut(s)	1587, 2183
BspT107I	GGYRCC	1 cut(s)	698
BsrDI	GCAATG	1 cut(s)	1164
BsrGI	TGTACA	1 cut(s)	2199
BsrI	ACTGG	3 cut(s)	143, 463, 1642
BssECI	CCNNGG	5 cut(s)	384, 918, 1595, 2128, 2514
BssMI	GATC	7 cut(s)	285, 395, 1210, 1579, 2094, 2188, 2412
BssNI	GRCGYC	1 cut(s)	881
BssSI	CACGAG	2 cut(s)	574, 1489
BssT1I	CCWWGG	1 cut(s)	918
Bst2BI	CACGAG	2 cut(s)	574, 1489
Bst2UI	CCWGG	1 cut(s)	1444
Bst4CI	ACNGT	8 cut(s)	240, 265, 280, 1823, 2129, 2311, 2465, 2605
Bst6I	CTCTTC	3 cut(s)	558, 709, 2403
BstACI	GRCGYC	1 cut(s)	881
BstAPI	GCANNNNNTGC	1 cut(s)	32
BstAUI	TGTACA	1 cut(s)	2199
BstBAI	YACGTR	3 cut(s)	119, 233, 1372
BstC8I	GCNNGC	3 cut(s)	1420, 1523, 2455
BstDSI	CCRYGG	1 cut(s)	2128
BstF5I	GGATG	4 cut(s)	132, 835, 1869, 2356
BstFNI	CGCG	1 cut(s)	563
BstH2I	RGCGCY	3 cut(s)	326, 1629, 2284
BstHHI	GCGC	3 cut(s)	325, 1628, 2283
BstKTI	GATC	7 cut(s)	288, 398, 1213, 1582, 2097, 2191, 2415
BstMAI	GTCTC	5 cut(s)	258, 1183, 1315, 1709, 2060
BstMBI	GATC	7 cut(s)	285, 395, 1210, 1579, 2094, 2188, 2412
BstMWI	GCNNNNNNNGC	5 cut(s)	26, 32, 923, 1844, 2474
BstNI	CCWGG	1 cut(s)	1444
BstNSI	RCATGY	2 cut(s)	1328, 1717
BstSCI	CCNGG	5 cut(s)	1442, 1594, 1595, 1670, 2514
BstSFI	CTRYAG	1 cut(s)	1309
BstUI	CGCG	1 cut(s)	563
BstV1I	GCAGC	4 cut(s)	32, 35, 38, 501
BstV2I	GAAGAC	2 cut(s)	791, 1372
BstX2I	RGATCY	1 cut(s)	395
BstYI	RGATCY	1 cut(s)	395
Bsu15I	ATCGAT	1 cut(s)	2399
BsuI	GTATCC	1 cut(s)	559
BsuRI	GGCC	1 cut(s)	1944
BsuTUI	ATCGAT	1 cut(s)	2399
BtgI	CCRYGG	1 cut(s)	2128
BtrI	CACGTC	1 cut(s)	868
BtsCI	GGATG	4 cut(s)	132, 835, 1869, 2356
BtsI	GCAGTG	1 cut(s)	136
BtsIMutI	CAGTG	6 cut(s)	136, 1077, 1535, 2307, 2350, 2470
Cac8I	GCNNGC	3 cut(s)	1420, 1523, 2455
CaiI	CAGNNNCTG	1 cut(s)	32
CfoI	GCGC	3 cut(s)	325, 1628, 2283
Cfr13I	GGNCC	1 cut(s)	1942
Cfr9I	CCCGGG	1 cut(s)	1595
ClaI	ATCGAT	1 cut(s)	2399
CseI	GACGC	1 cut(s)	2490
Csp6I	GTAC	1 cut(s)	2200
CviAII	CATG	9 cut(s)	78, 273, 440, 1325, 1349, 1526, 1714, 2522, 2558
CviQI	GTAC	1 cut(s)	2200
DpnI	GATC	7 cut(s)	287, 397, 1212, 1581, 2096, 2190, 2414
DpnII	GATC	7 cut(s)	285, 395, 1210, 1579, 2094, 2188, 2412
DraI	TTTAAA	2 cut(s)	1698, 2079
DraIII	CACNNNGTG	1 cut(s)	1541
Eam1104I	CTCTTC	3 cut(s)	558, 709, 2403
EarI	CTCTTC	3 cut(s)	558, 709, 2403
Ecl136II	GAGCTC	1 cut(s)	608
Eco130I	CCWWGG	1 cut(s)	918
Eco24I	GRGCYC	2 cut(s)	610, 1881
Eco32I	GATATC	1 cut(s)	591
Eco47III	AGCGCT	2 cut(s)	324, 2282
Eco53kI	GAGCTC	1 cut(s)	608
Eco57I	CTGAAG	2 cut(s)	539, 1596
Eco88I	CYCGRG	2 cut(s)	1423, 1595
EcoICRI	GAGCTC	1 cut(s)	608
EcoRI	GAATTC	5 cut(s)	109, 371, 762, 847, 1396
EcoRII	CCWGG	1 cut(s)	1442
EcoRV	GATATC	1 cut(s)	591
EcoT14I	CCWWGG	1 cut(s)	918
EcoT22I	ATGCAT	3 cut(s)	1354, 1414, 2076
EcoT38I	GRGCYC	2 cut(s)	610, 1881
ErhI	CCWWGG	1 cut(s)	918
Esp3I	CGTCTC	1 cut(s)	1183
FaeI	CATG	9 cut(s)	81, 276, 443, 1328, 1352, 1529, 1717, 2525, 2561
FalI	AAGNNNNNCTT	2 cut(s)	1049, 1081
FatI	CATG	9 cut(s)	77, 272, 439, 1324, 1348, 1525, 1713, 2521, 2557
FauI	CCCGC	1 cut(s)	1326
FauNDI	CATATG	1 cut(s)	1414
FbaI	TGATCA	1 cut(s)	1210
Fnu4HI	GCNGC	5 cut(s)	21, 24, 27, 490, 1686
FokI	GGATG	4 cut(s)	119, 842, 1876, 2363
FriOI	GRGCYC	2 cut(s)	610, 1881
Fsp4HI	GCNGC	5 cut(s)	21, 24, 27, 490, 1686
FspBI	CTAG	4 cut(s)	2012, 2042, 2297, 2358
GlaI	GCGC	3 cut(s)	324, 1627, 2282
GluI	GCNGC	5 cut(s)	21, 24, 27, 490, 1686
HaeII	RGCGCY	3 cut(s)	326, 1629, 2284
HaeIII	GGCC	1 cut(s)	1944
HapII	CCGG	4 cut(s)	1293, 1596, 1671, 2516
HgaI	GACGC	1 cut(s)	2490
HhaI	GCGC	3 cut(s)	325, 1628, 2283
Hin1I	GRCGYC	1 cut(s)	881
Hin1II	CATG	9 cut(s)	81, 276, 443, 1328, 1352, 1529, 1717, 2525, 2561
Hin6I	GCGC	3 cut(s)	323, 1626, 2281
HinP1I	GCGC	3 cut(s)	323, 1626, 2281
HincII	GTYRAC	1 cut(s)	1711
HindII	GTYRAC	1 cut(s)	1711
HindIII	AAGCTT	5 cut(s)	531, 689, 1137, 1588, 2455
HpaII	CCGG	4 cut(s)	1293, 1596, 1671, 2516
HphI	GGTGA	5 cut(s)	1158, 1391, 1574, 2421, 2496
Hpy166II	GTNNAC	7 cut(s)	128, 236, 579, 678, 1711, 2332, 2429
Hpy188I	TCNGA	8 cut(s)	87, 558, 643, 1129, 1304, 1364, 1574, 2188
Hpy188III	TCNNGA	9 cut(s)	173, 354, 941, 994, 1143, 1631, 1897, 2232, 2575
Hpy8I	GTNNAC	7 cut(s)	128, 236, 579, 678, 1711, 2332, 2429
Hpy99I	CGWCG	2 cut(s)	1178, 2228
HpyAV	CCTTC	2 cut(s)	106, 1423
HpyCH4III	ACNGT	8 cut(s)	240, 265, 280, 1823, 2129, 2311, 2465, 2605
HpyF10VI	GCNNNNNNNGC	5 cut(s)	26, 32, 923, 1844, 2474
Hsp92I	GRCGYC	1 cut(s)	881
Hsp92II	CATG	9 cut(s)	81, 276, 443, 1328, 1352, 1529, 1717, 2525, 2561
HspAI	GCGC	3 cut(s)	323, 1626, 2281
Ksp22I	TGATCA	1 cut(s)	1210
Kzo9I	GATC	7 cut(s)	285, 395, 1210, 1579, 2094, 2188, 2412
LmnI	GCTCC	2 cut(s)	605, 1154
Lsp1109I	GCAGC	4 cut(s)	32, 35, 38, 501
LweI	GCATC	7 cut(s)	326, 820, 936, 1133, 1399, 1732, 1823
MaeI	CTAG	4 cut(s)	2012, 2042, 2297, 2358
MaeIII	GTNAC	7 cut(s)	422, 1282, 1498, 1655, 1888, 2353, 2502
MalI	GATC	7 cut(s)	287, 397, 1212, 1581, 2096, 2190, 2414
MboI	GATC	7 cut(s)	285, 395, 1210, 1579, 2094, 2188, 2412
MflI	RGATCY	1 cut(s)	395
MhlI	GDGCHC	5 cut(s)	610, 1121, 1881, 2001, 2309
MlyI	GAGTC	4 cut(s)	205, 1155, 2251, 2572
MmeI	TCCRAC	2 cut(s)	463, 1066
Mph1103I	ATGCAT	3 cut(s)	1354, 1414, 2076
MroXI	GAANNNNTTC	1 cut(s)	371
MslI	CAYNNNNRTG	1 cut(s)	1374
MspA1I	CMGCKG	1 cut(s)	769
MspI	CCGG	4 cut(s)	1293, 1596, 1671, 2516
MspR9I	CCNGG	5 cut(s)	1444, 1596, 1597, 1672, 2516
Mva1269I	GAATGC	1 cut(s)	232
MvaI	CCWGG	1 cut(s)	1444
MvnI	CGCG	1 cut(s)	563
MwoI	GCNNNNNNNGC	5 cut(s)	26, 32, 923, 1844, 2474
NciI	CCSGG	4 cut(s)	1596, 1597, 1672, 2516
NdeI	CATATG	1 cut(s)	1414
NdeII	GATC	7 cut(s)	285, 395, 1210, 1579, 2094, 2188, 2412
NlaIII	CATG	9 cut(s)	81, 276, 443, 1328, 1352, 1529, 1717, 2525, 2561
NlaIV	GGNNCC	1 cut(s)	700
NmeAIII	GCCGAG	1 cut(s)	1100
NmuCI	GTSAC	1 cut(s)	2502
NsiI	ATGCAT	3 cut(s)	1354, 1414, 2076
NspI	RCATGY	2 cut(s)	1328, 1717
PaeR7I	CTCGAG	1 cut(s)	1423
PciI	ACATGT	2 cut(s)	1324, 1713
PctI	GAATGC	1 cut(s)	232
PdmI	GAANNNNTTC	1 cut(s)	371
PkrI	GCNGC	5 cut(s)	22, 25, 28, 491, 1687
PleI	GAGTC	4 cut(s)	204, 1154, 2251, 2572
PpsI	GAGTC	4 cut(s)	204, 1154, 2251, 2572
Ppu21I	YACGTR	3 cut(s)	119, 233, 1372
PscI	ACATGT	2 cut(s)	1324, 1713
PsiI	TTATAA	2 cut(s)	452, 1977
Psp124BI	GAGCTC	1 cut(s)	610
Psp1406I	AACGTT	3 cut(s)	1190, 1892, 2105
Psp6I	CCWGG	1 cut(s)	1442
PspGI	CCWGG	1 cut(s)	1442
PspN4I	GGNNCC	1 cut(s)	700
PspPI	GGNCC	1 cut(s)	1942
PspXI	VCTCGAGB	1 cut(s)	1423
PstNI	CAGNNNCTG	1 cut(s)	32
PsuI	RGATCY	1 cut(s)	395
RsaI	GTAC	1 cut(s)	2201
RsaNI	GTAC	1 cut(s)	2200
RseI	CAYNNNNRTG	1 cut(s)	1374
SacI	GAGCTC	1 cut(s)	610
SatI	GCNGC	5 cut(s)	21, 24, 27, 490, 1686
Sau3AI	GATC	7 cut(s)	285, 395, 1210, 1579, 2094, 2188, 2412
Sau96I	GGNCC	1 cut(s)	1942
SchI	GAGTC	4 cut(s)	205, 1155, 2251, 2572
ScrFI	CCNGG	5 cut(s)	1444, 1596, 1597, 1672, 2516
SduI	GDGCHC	5 cut(s)	610, 1121, 1881, 2001, 2309
SfaNI	GCATC	7 cut(s)	326, 820, 936, 1133, 1399, 1732, 1823
SfcI	CTRYAG	1 cut(s)	1309
Sfr274I	CTCGAG	1 cut(s)	1423
SlaI	CTCGAG	1 cut(s)	1423
SmaI	CCCGGG	1 cut(s)	1597
SmiMI	CAYNNNNRTG	1 cut(s)	1374
SmlI	CTYRAG	7 cut(s)	493, 910, 941, 994, 1423, 1946, 2284
SmoI	CTYRAG	7 cut(s)	493, 910, 941, 994, 1423, 1946, 2284
SsiI	CCGC	4 cut(s)	563, 767, 1333, 1685
SspMI	CTAG	4 cut(s)	2012, 2042, 2297, 2358
SstI	GAGCTC	1 cut(s)	610
StyD4I	CCNGG	5 cut(s)	1442, 1594, 1595, 1670, 2514
StyI	CCWWGG	1 cut(s)	918
TaaI	ACNGT	8 cut(s)	240, 265, 280, 1823, 2129, 2311, 2465, 2605
TatI	WGTACW	1 cut(s)	2199
TauI	GCSGC	1 cut(s)	1688
TscAI	CASTG	6 cut(s)	143, 1084, 1542, 2314, 2350, 2470
TseFI	GTSAC	1 cut(s)	2502
TseI	GCWGC	4 cut(s)	20, 23, 26, 489
Tsp45I	GTSAC	1 cut(s)	2502
TspGWI	ACGGA	2 cut(s)	441, 1651
TspMI	CCCGGG	1 cut(s)	1595
TspRI	CASTG	6 cut(s)	143, 1084, 1542, 2314, 2350, 2470
XapI	RAATTY	7 cut(s)	109, 371, 762, 847, 1396, 2263, 2538
XceI	RCATGY	2 cut(s)	1328, 1717
XhoI	CTCGAG	1 cut(s)	1423
XmaI	CCCGGG	1 cut(s)	1595
XmnI	GAANNNNTTC	1 cut(s)	371
XspI	CTAG	4 cut(s)	2012, 2042, 2297, 2358
ZraI	GACGTC	1 cut(s)	882
Zsp2I	ATGCAT	3 cut(s)	1354, 1414, 2076

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.