Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0022011

Physical Location & Seq

Genomic Coordinates Reverse (-)

25793163 .. 25795863

Gene Structure 2701 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g25510.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2637 bp

ATGTCTATAGCAAAAGTCACCAGGTTCGTTGTCAACACAAATGAAGTTAACTGTTTCAAAGAAACTTGCCTCCGGGTTCTTTCAGCATGCAACTCACAGTCCCTGCCAGAGGGCATCTGTGTGCACAGCCCAATTACCAAACTGGGTCTTGACGATGACCTCTACTTAACCAACAACCTGCTGTCTCTCTATGCAAAATGCTCTGGAGTTGAGGCTGCACGCCACTTGTTCGATGAAATGCCTCGCAGAGATGTTGTATCATGGACCGGGATGCTGTCCGCGTATGTCAGGAACGGACACTATCATGACTCGCTTGAATTCTTTGATTCGATGATTGTTTCCGGTCAGTGCCCCAATGAGTTTACACTCTCAAGTGTGTTAAAATCGTGCTCGTTGTTGGGAGAGTTGGATTATGGGACTCGAATCCATACGTTTGTGATCGAGCTTGGATTCGAGCCAAATCAATTTCTTGGTAGTAGTATGATTGATCTGTATGCCAAGTGTGGTTTAACCGAAGAGGCTTGTAAGATATTTAGGGATATGGAGAGTGGTGATACTGTTTCTTGGACTGCAATCATCTCTTCATTGGTCCAAGCTCAGAAATGGAGACAGGCTCTAGGCTACTACATGGATATGATATATGCTGCTAGGGTTCATCCAAATGAGTTCACTTTCGTAAAACTTTTCGCTGCATCCTGCTCTCTTGGTTTGAACTATGGGAAATTACTACATACCCATTTGATAAGATTCGGAATGAGGCTGAATCTGGTCTTGAAGACAGCCATGGTCAATATGTACTCGAAATGCCAGAAGATGGAAGATGCTATCAAGGTGTTGAATCAAACATCTGAATATGATGTGTTGTTGTGGACCTCTGTTATTTCTGGCTTCGCTCAAAGTTTGAGAGTCACGGACGCTGTTGCTGCATTGCACGAGATGGAGCTCTCTGGAATTGTACCGAATAATTTTACATACTCTAGTATGCTGAAAGCTTGCTCAGCGGTTTTGTTACTGGAATTAGGAAAGCAGATCCATTCACGGGTGCTCAAGGCTGGATTGGAGGATGATACTTGTGCCGGCGGTGCAGTAGTTGATATGTACTTGAAATGTTCTGACCTCATAGAAGATGGTTTGAGAGCGTTTAGGGAGATAACATTGCCGAGTGTCATCACTTGGACTTCATTGATTGCCGGTTTTGCTGAACACGGTTTTGAACAAGATTCTTTTCAGTATTTTCTGGAGATGCGAACAGTAGGAGTCGAGCCAAATTCCTTTACTTTCTCTAGCATTCTTCGTGCCTGCAGTACCGTTAAATCTCTTAGTCAGACACGAAAGATCCATGGACGTATAGTCAAAACCAAAGCTGGCAGTGATATAGCTGTTGGGAATGCACTTGTGGATGCTTATGCTGCGCTGGGGATGGTGGATGATGCGTGGCATGTGATTAACTCCATGATCCATCGAGATGCTATCACATATACAGGTTTAGCCACACGAATGAATCAGCTAGGTAATTATGAAATTGCACTGGATGTCATCACCCGTATGCAGACTGATGACGTTATGATGGATGGGTTTAGCCTTGCAAGCTTCTTATCTGCATCAGCTGGCTTGGCATCAATGGAAACTGGGAAGCAACTTCATTGCTATTCTATCAAAGCTGGTTTAGGCAGTGGGATATCAGTTTTGAATGCCTTGGTGGACTTATATGGGAAATGTGGGTGCAGAGATGATGCACACAAAGCTTTCAGTGAGATTTCTGAGCCAGATATAGTGTCATGGAACTGCTTGATTTCTGGATTGGCATCGAGTGGATATATTTCATCCGCTCTCTCCTCCTTTGACAACATGAGGTTGGCAGGATTTAAACCTGATTCCATTACATTCCTGTTGGTGCTTTTCACTTGCAGCCATGGCGGTTTGGTTGAACTAGGTCTTGAGCATTTTCAGTCAATGAGAGAAAAGTATGATATAGTTCCACAACTGGATCACTATTCCTGTTTAGTTGATCTCCTTGGCAGAGCAGGGCGACTAGAGGATGCCATGGAAGCGATCATGACCATGCCCTTTAAGCCAGATGCCTTAATTTACAAGACACTATTGGCTGCCTGCAAGTTACATAAAAACATTTCCCTCGGGGAATATACAGCGAGGCGAGGGATGGAACTTGACCTGTCTGATCCAGCTTTTTACGTGCTGCTTGCAAGTATGTATGATGATTCTGGTCAGCCGGATTTAGCCAAAAGTACAAGACAAGCAATGAGGGAGAGGGGATTGAAGAAGAATGTCGGGCAGTGCTGGATGGAAATAAGGAACAGGGTTCATCTCTTCGATGCAGGAGATCGATCACATCCACAGATAAATGAAATCCAAGAGAAGGTAGAATCTCTTATTACAGAGTTGAAGAAGAGAGGATACTCGTATCAAGATTACGAAGATTCATCATATCACATTGAGAAGTTAGCCGTTGCATTCGGTCTTCTCAAAACACCGCGTAACGCCTCCATACGCGTGTCTAAGAATGTGCGCATATGCGGCGAATGCCACAGCTTTATAACGCTTGTAACTCAAGTTGTTGGTCGGGAGATCATTGTGAGGGACGGGAACCGGTTGCATATCTTCAACAAGGCCTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2

Protein Analysis

879

Amino Acids

97.54

Weight (kDa)

6.05

Isoelectric Point (pI)

35.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	83 - 130	5.2e-09	PPR repeat family
PPR_2	PF13041	286 - 333	7e-10	PPR repeat family
PPR_2	PF13041	387 - 435	5.1e-09	PPR repeat family
PPR_3	PF13812	387 - 434	9.3e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	589 - 633	1.3e-09	PPR repeat family
E_motif	PF20431	707 - 769	9.1e-06	E motif
Eplus_motif	PF20430	774 - 801	1.1e-06	E+ motif
DYW_deaminase	PF14432	816 - 876	1e-20	DYW family of nucleic acid deaminases

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0022011)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52850
malus_domestica	MD07G1280500.v1.1
prunus_persica	Prupe.2G302700_v2.0.a1
pyrus_communis	pycom07g25510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2555
Acc16I	TGCGCA	1 cut(s)	2528
Acc36I	ACCTGC	1 cut(s)	186
AccB7I	CCANNNNNTGG	1 cut(s)	814
AccBSI	CCGCTC	1 cut(s)	1829
AccII	CGCG	3 cut(s)	281, 2494, 2511
AciI	CCGC	7 cut(s)	279, 1001, 1080, 1827, 1917, 2492, 2535
AclWI	GGATC	5 cut(s)	1024, 1330, 1450, 1995, 2174
AcsI	RAATTY	2 cut(s)	317, 1267
AfaI	GTAC	5 cut(s)	797, 957, 1100, 1306, 2248
AfiI	CCNNNNNNNGG	4 cut(s)	109, 814, 1039, 2377
AflIII	ACRYGT	1 cut(s)	2509
AgeI	ACCGGT	1 cut(s)	2607
AhdI	GACNNNNNGTC	1 cut(s)	1349
AjnI	CCWGG	1 cut(s)	20
Alw21I	GWGCWC	4 cut(s)	126, 392, 945, 1047
Alw26I	GTCTC	2 cut(s)	189, 601
Alw44I	GTGCAC	1 cut(s)	122
AlwI	GGATC	5 cut(s)	1024, 1330, 1450, 1995, 2174
AlwNI	CAGNNNCTG	1 cut(s)	103
Ama87I	CYCGRG	1 cut(s)	2135
AoxI	GGCC	1 cut(s)	2628
ApaLI	GTGCAC	1 cut(s)	122
ApeKI	GCWGC	8 cut(s)	215, 644, 689, 923, 1409, 1908, 2105, 2197
ApoI	RAATTY	2 cut(s)	317, 1267
AsiGI	ACCGGT	1 cut(s)	2607
AspLEI	GCGC	2 cut(s)	1414, 2529
AspS9I	GGNCC	3 cut(s)	264, 589, 870
AsuC2I	CCSGG	2 cut(s)	74, 268
AsuHPI	GGTGA	3 cut(s)	10, 563, 1531
AvaI	CYCGRG	1 cut(s)	2135
AvaII	GGWCC	3 cut(s)	264, 589, 870
BaeGI	GKGCMC	2 cut(s)	126, 353
BanII	GRGCYC	1 cut(s)	945
BarI	GAAGNNNNNNTAC	2 cut(s)	2399, 2431
BauI	CACGAG	1 cut(s)	932
BbsI	GAAGAC	2 cut(s)	782, 2471
Bbv12I	GWGCWC	4 cut(s)	126, 392, 945, 1047
BbvI	GCAGC	8 cut(s)	202, 631, 676, 910, 1396, 1920, 2092, 2184
BccI	CCATC	9 cut(s)	808, 931, 1121, 1414, 1467, 1561, 1565, 2155, 2296
BceAI	ACGGC	1 cut(s)	2450
BciT130I	CCWGG	1 cut(s)	22
BciVI	GTATCC	1 cut(s)	2408
BcnI	CCSGG	2 cut(s)	74, 268
BcoDI	GTCTC	2 cut(s)	189, 601
BfaI	CTAG	7 cut(s)	617, 648, 978, 1284, 1508, 1931, 2033
BfmI	CTRYAG	2 cut(s)	6, 1300
BfuAI	ACCTGC	1 cut(s)	186
BfuI	GTATCC	1 cut(s)	2408
BisI	GCNGC	9 cut(s)	216, 645, 690, 924, 1410, 1909, 2106, 2198, 2536
BlpI	GCTNAGC	1 cut(s)	997
BlsI	GCNGC	9 cut(s)	217, 646, 691, 925, 1411, 1910, 2107, 2199, 2537
Bme1390I	CCNGG	3 cut(s)	22, 74, 268
Bme18I	GGWCC	3 cut(s)	264, 589, 870
BmeRI	GACNNNNNGTC	1 cut(s)	1349
BmeT110I	CYCGRG	1 cut(s)	2135
BmgT120I	GGNCC	3 cut(s)	264, 589, 870
BmiI	GGNNCC	1 cut(s)	2606
BmrFI	CCNGG	3 cut(s)	22, 74, 268
BmrI	ACTGGG	2 cut(s)	152, 1638
BmuI	ACTGGG	2 cut(s)	152, 1638
BpiI	GAAGAC	2 cut(s)	782, 2471
BplI	GAGNNNNNCTC	2 cut(s)	598, 630
BpmI	CTGGAG	2 cut(s)	225, 1259
Bpu1102I	GCTNAGC	1 cut(s)	997
BpuEI	CTTGAG	4 cut(s)	355, 1031, 1958, 2553
BpuMI	CCSGG	2 cut(s)	74, 268
Bsa29I	ATCGAT	1 cut(s)	2344
BsaAI	YACGTR	1 cut(s)	2194
BsaBI	GATNNNNATC	1 cut(s)	1804
BsaJI	CCNNGG	7 cut(s)	783, 1339, 1695, 1912, 2014, 2043, 2134
BsaWI	WCCGGW	2 cut(s)	341, 2607
Bsc4I	CCNNNNNNNGG	4 cut(s)	109, 814, 1039, 2377
Bse118I	RCCGGY	3 cut(s)	1076, 1190, 2607
Bse1I	ACTGG	5 cut(s)	147, 1017, 1533, 1633, 1989
Bse3DI	GCAATG	4 cut(s)	926, 1154, 1642, 2265
Bse8I	GATNNNNATC	1 cut(s)	1804
BseBI	CCWGG	1 cut(s)	22
BseCI	ATCGAT	1 cut(s)	2344
BseDI	CCNNGG	7 cut(s)	783, 1339, 1695, 1912, 2014, 2043, 2134
BseJI	GATNNNNATC	1 cut(s)	1804
BseLI	CCNNNNNNNGG	4 cut(s)	109, 814, 1039, 2377
BseMI	GCAATG	4 cut(s)	926, 1154, 1642, 2265
BseMII	CTCAG	3 cut(s)	611, 1011, 1752
BseNI	ACTGG	5 cut(s)	147, 1017, 1533, 1633, 1989
BseRI	GAGGAG	1 cut(s)	1825
BseSI	GKGCMC	2 cut(s)	126, 353
BseXI	GCAGC	8 cut(s)	202, 631, 676, 910, 1396, 1920, 2092, 2184
BseYI	CCCAGC	1 cut(s)	1414
BsgI	GTGCAG	3 cut(s)	201, 1104, 1744
Bsh1236I	CGCG	3 cut(s)	281, 2494, 2511
BshFI	GGCC	1 cut(s)	2630
BshTI	ACCGGT	1 cut(s)	2607
BshVI	ATCGAT	1 cut(s)	2344
BsiHKAI	GWGCWC	4 cut(s)	126, 392, 945, 1047
BsiHKCI	CYCGRG	1 cut(s)	2135
BsiSI	CCGG	7 cut(s)	73, 267, 342, 1077, 1191, 2231, 2608
BslFI	GGGAC	3 cut(s)	85, 430, 2612
BslI	CCNNNNNNNGG	4 cut(s)	109, 814, 1039, 2377
BsmAI	GTCTC	2 cut(s)	189, 601
BsmFI	GGGAC	3 cut(s)	85, 430, 2612
BsmI	GAATGC	5 cut(s)	1287, 1393, 1696, 2471, 2546
BsnI	GGCC	1 cut(s)	2630
BsoBI	CYCGRG	1 cut(s)	2135
Bsp1286I	GDGCHC	5 cut(s)	126, 353, 392, 945, 1047
Bsp1720I	GCTNAGC	1 cut(s)	997
Bsp19I	CCATGG	4 cut(s)	783, 1339, 1912, 2043
BspACI	CCGC	7 cut(s)	279, 1001, 1080, 1827, 1917, 2492, 2535
BspANI	GGCC	1 cut(s)	2630
BspCNI	CTCAG	3 cut(s)	610, 1010, 1753
BspDI	ATCGAT	1 cut(s)	2344
BspFNI	CGCG	3 cut(s)	281, 2494, 2511
BspHI	TCATGA	2 cut(s)	304, 2055
BspLI	GGNNCC	1 cut(s)	2606
BspMAI	CTGCAG	1 cut(s)	1304
BspMI	ACCTGC	1 cut(s)	186
BspPI	GGATC	5 cut(s)	1024, 1330, 1450, 1995, 2174
BsrBI	CCGCTC	1 cut(s)	1829
BsrDI	GCAATG	4 cut(s)	926, 1154, 1642, 2265
BsrFI	RCCGGY	3 cut(s)	1076, 1190, 2607
BsrI	ACTGG	5 cut(s)	147, 1017, 1533, 1633, 1989
BssAI	RCCGGY	3 cut(s)	1076, 1190, 2607
BssECI	CCNNGG	7 cut(s)	783, 1339, 1695, 1912, 2014, 2043, 2134
BssSI	CACGAG	1 cut(s)	932
BssT1I	CCWWGG	6 cut(s)	783, 1339, 1695, 1912, 2014, 2043
Bst2BI	CACGAG	1 cut(s)	932
Bst2UI	CCWGG	1 cut(s)	22
Bst4CI	ACNGT	6 cut(s)	53, 99, 559, 1208, 1252, 1309
Bst6I	CTCTTC	4 cut(s)	510, 586, 2333, 2402
BstBAI	YACGTR	1 cut(s)	2194
BstDEI	CTNAG	5 cut(s)	597, 997, 1319, 1761, 2517
BstDSI	CCRYGG	4 cut(s)	783, 1339, 1912, 2043
BstENI	CCTNNNNNAGG	1 cut(s)	107
BstFNI	CGCG	3 cut(s)	281, 2494, 2511
BstHHI	GCGC	2 cut(s)	1414, 2529
BstMAI	GTCTC	2 cut(s)	189, 601
BstNI	CCWGG	1 cut(s)	22
BstNSI	RCATGY	2 cut(s)	90, 1442
BstSCI	CCNGG	3 cut(s)	20, 72, 266
BstSFI	CTRYAG	2 cut(s)	6, 1300
BstSLI	GKGCMC	2 cut(s)	126, 353
BstUI	CGCG	3 cut(s)	281, 2494, 2511
BstV1I	GCAGC	8 cut(s)	202, 631, 676, 910, 1396, 1920, 2092, 2184
BstV2I	GAAGAC	2 cut(s)	782, 2471
BstX2I	RGATCY	2 cut(s)	1029, 1335
BstYI	RGATCY	2 cut(s)	1029, 1335
Bsu15I	ATCGAT	1 cut(s)	2344
BsuI	GTATCC	1 cut(s)	2408
BsuRI	GGCC	1 cut(s)	2630
BsuTUI	ATCGAT	1 cut(s)	2344
BtgI	CCRYGG	4 cut(s)	783, 1339, 1912, 2043
BtsI	GCAGTG	3 cut(s)	1375, 1678, 2300
BtsIMutI	CAGTG	6 cut(s)	353, 1375, 1526, 1678, 1756, 2300
BveI	ACCTGC	1 cut(s)	186
CaiI	CAGNNNCTG	1 cut(s)	103
CciI	TCATGA	2 cut(s)	304, 2055
CfoI	GCGC	2 cut(s)	1414, 2529
Cfr10I	RCCGGY	3 cut(s)	1076, 1190, 2607
Cfr13I	GGNCC	3 cut(s)	264, 589, 870
ClaI	ATCGAT	1 cut(s)	2344
CseI	GACGC	1 cut(s)	923
CsiI	ACCWGGT	1 cut(s)	20
Csp6I	GTAC	5 cut(s)	796, 956, 1099, 1305, 2247
CspAI	ACCGGT	1 cut(s)	2607
CviQI	GTAC	5 cut(s)	796, 956, 1099, 1305, 2247
DdeI	CTNAG	5 cut(s)	597, 997, 1319, 1761, 2517
DraI	TTTAAA	1 cut(s)	1867
DriI	GACNNNNNGTC	1 cut(s)	1349
Eam1104I	CTCTTC	4 cut(s)	510, 586, 2333, 2402
Eam1105I	GACNNNNNGTC	1 cut(s)	1349
EarI	CTCTTC	4 cut(s)	510, 586, 2333, 2402
Ecl136II	GAGCTC	1 cut(s)	943
Eco130I	CCWWGG	6 cut(s)	783, 1339, 1695, 1912, 2014, 2043
Eco147I	AGGCCT	1 cut(s)	2630
Eco24I	GRGCYC	1 cut(s)	945
Eco32I	GATATC	1 cut(s)	1680
Eco47I	GGWCC	3 cut(s)	264, 589, 870
Eco53kI	GAGCTC	1 cut(s)	943
Eco88I	CYCGRG	1 cut(s)	2135
EcoICRI	GAGCTC	1 cut(s)	943
EcoNI	CCTNNNNNAGG	1 cut(s)	107
EcoRI	GAATTC	1 cut(s)	317
EcoRII	CCWGG	1 cut(s)	20
EcoRV	GATATC	1 cut(s)	1680
EcoT14I	CCWWGG	6 cut(s)	783, 1339, 1695, 1912, 2014, 2043
EcoT38I	GRGCYC	1 cut(s)	945
ErhI	CCWWGG	6 cut(s)	783, 1339, 1695, 1912, 2014, 2043
FaqI	GGGAC	3 cut(s)	85, 430, 2612
FauNDI	CATATG	1 cut(s)	2531
Fnu4HI	GCNGC	9 cut(s)	216, 645, 690, 924, 1410, 1909, 2106, 2198, 2536
FriOI	GRGCYC	1 cut(s)	945
Fsp4HI	GCNGC	9 cut(s)	216, 645, 690, 924, 1410, 1909, 2106, 2198, 2536
FspAI	RTGCGCAY	1 cut(s)	2528
FspBI	CTAG	7 cut(s)	617, 648, 978, 1284, 1508, 1931, 2033
FspI	TGCGCA	1 cut(s)	2528
GlaI	GCGC	2 cut(s)	1413, 2528
GluI	GCNGC	9 cut(s)	216, 645, 690, 924, 1410, 1909, 2106, 2198, 2536
GsaI	CCCAGC	1 cut(s)	1418
GsuI	CTGGAG	2 cut(s)	225, 1259
HaeIII	GGCC	1 cut(s)	2630
HapII	CCGG	7 cut(s)	73, 267, 342, 1077, 1191, 2231, 2608
HgaI	GACGC	1 cut(s)	923
HhaI	GCGC	2 cut(s)	1414, 2529
Hin6I	GCGC	2 cut(s)	1412, 2527
HinP1I	GCGC	2 cut(s)	1412, 2527
HincII	GTYRAC	2 cut(s)	34, 49
HindII	GTYRAC	2 cut(s)	34, 49
HindIII	AAGCTT	3 cut(s)	990, 1588, 1743
HpaI	GTTAAC	1 cut(s)	49
HpaII	CCGG	7 cut(s)	73, 267, 342, 1077, 1191, 2231, 2608
HphI	GGTGA	3 cut(s)	10, 563, 1531
Hpy166II	GTNNAC	7 cut(s)	34, 49, 124, 363, 669, 870, 1702
Hpy188I	TCNGA	7 cut(s)	600, 752, 850, 1114, 1326, 1762, 2179
Hpy8I	GTNNAC	7 cut(s)	34, 49, 124, 363, 669, 870, 1702
HpyAV	CCTTC	1 cut(s)	2371
HpyCH4III	ACNGT	6 cut(s)	53, 99, 559, 1208, 1252, 1309
HpyCH4IV	ACGT	4 cut(s)	431, 1345, 1560, 2193
HpyF3I	CTNAG	5 cut(s)	597, 997, 1319, 1761, 2517
HpySE526I	ACGT	4 cut(s)	431, 1345, 1560, 2193
HspAI	GCGC	2 cut(s)	1412, 2527
KroI	GCCGGC	1 cut(s)	1076
KroNI	GCCGGC	1 cut(s)	1078
KspAI	GTTAAC	1 cut(s)	49
LmnI	GCTCC	1 cut(s)	940
Lsp1109I	GCAGC	8 cut(s)	202, 631, 676, 910, 1396, 1920, 2092, 2184
MabI	ACCWGGT	1 cut(s)	20
MaeI	CTAG	7 cut(s)	617, 648, 978, 1284, 1508, 1931, 2033
MaeII	ACGT	4 cut(s)	431, 1345, 1560, 2193
MaeIII	GTNAC	6 cut(s)	16, 907, 1008, 2115, 2495, 2563
MbiI	CCGCTC	1 cut(s)	1829
MflI	RGATCY	2 cut(s)	1029, 1335
MhlI	GDGCHC	5 cut(s)	126, 353, 392, 945, 1047
MluI	ACGCGT	1 cut(s)	2509
MlyI	GAGTC	4 cut(s)	302, 412, 915, 1266
MmeI	TCCRAC	1 cut(s)	387
MroNI	GCCGGC	1 cut(s)	1076
MseI	TTAA	9 cut(s)	48, 167, 380, 509, 1311, 1446, 1866, 2070, 2084
MslI	CAYNNNNRTG	9 cut(s)	119, 303, 632, 660, 1464, 1496, 1544, 2060, 2510
MspA1I	CMGCKG	2 cut(s)	1001, 1607
MspI	CCGG	7 cut(s)	73, 267, 342, 1077, 1191, 2231, 2608
MspR9I	CCNGG	3 cut(s)	22, 74, 268
Mva1269I	GAATGC	5 cut(s)	1287, 1393, 1696, 2471, 2546
MvaI	CCWGG	1 cut(s)	22
MvnI	CGCG	3 cut(s)	281, 2494, 2511
NaeI	GCCGGC	1 cut(s)	1078
NciI	CCSGG	2 cut(s)	74, 268
NcoI	CCATGG	4 cut(s)	783, 1339, 1912, 2043
NdeI	CATATG	1 cut(s)	2531
NgoMIV	GCCGGC	1 cut(s)	1076
NlaIV	GGNNCC	1 cut(s)	2606
NmeAIII	GCCGAG	1 cut(s)	1185
NmuCI	GTSAC	2 cut(s)	16, 907
NsbI	TGCGCA	1 cut(s)	2528
NspI	RCATGY	2 cut(s)	90, 1442
PaeI	GCATGC	1 cut(s)	90
PagI	TCATGA	2 cut(s)	304, 2055
PceI	AGGCCT	1 cut(s)	2630
PctI	GAATGC	5 cut(s)	1287, 1393, 1696, 2471, 2546
PdiI	GCCGGC	1 cut(s)	1078
PflMI	CCANNNNNTGG	1 cut(s)	814
PinAI	ACCGGT	1 cut(s)	2607
PkrI	GCNGC	9 cut(s)	217, 646, 691, 925, 1411, 1910, 2107, 2199, 2537
PleI	GAGTC	4 cut(s)	302, 412, 914, 1265
PpsI	GAGTC	4 cut(s)	302, 412, 914, 1265
Ppu21I	YACGTR	1 cut(s)	2194
PsiI	TTATAA	1 cut(s)	2555
Psp124BI	GAGCTC	1 cut(s)	945
Psp6I	CCWGG	1 cut(s)	20
PspFI	CCCAGC	1 cut(s)	1414
PspGI	CCWGG	1 cut(s)	20
PspN4I	GGNNCC	1 cut(s)	2606
PspPI	GGNCC	3 cut(s)	264, 589, 870
PstI	CTGCAG	1 cut(s)	1304
PstNI	CAGNNNCTG	1 cut(s)	103
PsuI	RGATCY	2 cut(s)	1029, 1335
PvuII	CAGCTG	1 cut(s)	1607
RsaI	GTAC	5 cut(s)	797, 957, 1100, 1306, 2248
RsaNI	GTAC	5 cut(s)	796, 956, 1099, 1305, 2247
RseI	CAYNNNNRTG	9 cut(s)	119, 303, 632, 660, 1464, 1496, 1544, 2060, 2510
SacI	GAGCTC	1 cut(s)	945
SaqAI	TTAA	9 cut(s)	48, 167, 380, 509, 1311, 1446, 1866, 2070, 2084
SatI	GCNGC	9 cut(s)	216, 645, 690, 924, 1410, 1909, 2106, 2198, 2536
Sau96I	GGNCC	3 cut(s)	264, 589, 870
SchI	GAGTC	4 cut(s)	302, 412, 915, 1266
ScrFI	CCNGG	3 cut(s)	22, 74, 268
SduI	GDGCHC	5 cut(s)	126, 353, 392, 945, 1047
SexAI	ACCWGGT	1 cut(s)	20
SfcI	CTRYAG	2 cut(s)	6, 1300
SinI	GGWCC	3 cut(s)	264, 589, 870
SmiMI	CAYNNNNRTG	9 cut(s)	119, 303, 632, 660, 1464, 1496, 1544, 2060, 2510
SmlI	CTYRAG	4 cut(s)	370, 1046, 1937, 2568
SmoI	CTYRAG	4 cut(s)	370, 1046, 1937, 2568
SphI	GCATGC	1 cut(s)	90
SseBI	AGGCCT	1 cut(s)	2630
SsiI	CCGC	7 cut(s)	279, 1001, 1080, 1827, 1917, 2492, 2535
SspMI	CTAG	7 cut(s)	617, 648, 978, 1284, 1508, 1931, 2033
SstI	GAGCTC	1 cut(s)	945
StuI	AGGCCT	1 cut(s)	2630
StyD4I	CCNGG	3 cut(s)	20, 72, 266
StyI	CCWWGG	6 cut(s)	783, 1339, 1695, 1912, 2014, 2043
TaaI	ACNGT	6 cut(s)	53, 99, 559, 1208, 1252, 1309
TaiI	ACGT	4 cut(s)	434, 1348, 1563, 2196
TaqII	GACCGA	1 cut(s)	2465
TatI	WGTACW	3 cut(s)	795, 1098, 2246
TauI	GCSGC	1 cut(s)	2538
Tru1I	TTAA	9 cut(s)	48, 167, 380, 509, 1311, 1446, 1866, 2070, 2084
Tru9I	TTAA	9 cut(s)	48, 167, 380, 509, 1311, 1446, 1866, 2070, 2084
TscAI	CASTG	6 cut(s)	353, 1375, 1533, 1678, 1756, 2300
TseFI	GTSAC	2 cut(s)	16, 907
TseI	GCWGC	8 cut(s)	215, 644, 689, 923, 1409, 1908, 2105, 2197
Tsp45I	GTSAC	2 cut(s)	16, 907
TspGWI	ACGGA	2 cut(s)	309, 926
TspRI	CASTG	6 cut(s)	353, 1375, 1533, 1678, 1756, 2300
Van91I	CCANNNNNTGG	1 cut(s)	814
VneI	GTGCAC	1 cut(s)	122
VpaK11BI	GGWCC	3 cut(s)	264, 589, 870
XagI	CCTNNNNNAGG	1 cut(s)	107
XapI	RAATTY	2 cut(s)	317, 1267
XceI	RCATGY	2 cut(s)	90, 1442
XspI	CTAG	7 cut(s)	617, 648, 978, 1284, 1508, 1931, 2033

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.