ATCG01020

50S ribosomal protein L32

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
Pt
Physical Location & Seq
Forward (+)
113449 .. 113607
159 bp
Loading structure...
UTR
Exon/CDS
Intron
ATCG01020.1

Sequence Viewer

Length: 159 bp
ATGGCAGTTCCAAAAAAACGTACTTCTATCTCGAAAAAGCGTATTCGTAAAAAAATTTGGAAAAGGAAGGGATATTGGACATCGTTGAAAGCTTTTTCATTAGGGAAATCACTTTCTACAGGTAATTCAAAAAGTTTTTTTGTACAGCAAAATAAATAA
Functional Annotation

Protein Analysis

52

Amino Acids

6.06

Weight (kDa)

12.0

Isoelectric Point (pI)

26.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0020878)

Species Orthologous Gene IDs
arabidopsis_thaliana ATCG01020
rosa_chinensis RchiOBHm_Chr4g0421191 RchiOBHm_CPg0502841
rosa_wichuraiana Rw4G018810 Rw4G020390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 54
AfaI GTAC 2 cut(s) 22, 144
AgsI TTSAA 2 cut(s) 88, 129
AluBI AGCT 1 cut(s) 92
AluI AGCT 1 cut(s) 92
ApoI RAATTY 1 cut(s) 54
BfmI CTRYAG 1 cut(s) 117
Bsp1407I TGTACA 1 cut(s) 142
BsrGI TGTACA 1 cut(s) 142
BstAUI TGTACA 1 cut(s) 142
BstSFI CTRYAG 1 cut(s) 117
Csp6I GTAC 2 cut(s) 21, 143
CviJI RGCY 1 cut(s) 92
CviKI_1 RGCY 1 cut(s) 92
CviQI GTAC 2 cut(s) 21, 143
FspEI CC 9 cut(s) 24, 43, 49, 53, 54, 61, 87, 88, 105
HindIII AAGCTT 1 cut(s) 90
Hpy188III TCNNGA 1 cut(s) 31
HpyAV CCTTC 1 cut(s) 61
HpyCH4IV ACGT 1 cut(s) 19
HpySE526I ACGT 1 cut(s) 19
LpnPI CCDG 1 cut(s) 105
MaeII ACGT 1 cut(s) 19
MluCI AATT 2 cut(s) 54, 124
RsaI GTAC 2 cut(s) 22, 144
RsaNI GTAC 2 cut(s) 21, 143
SetI ASST 3 cut(s) 22, 94, 124
SfcI CTRYAG 1 cut(s) 117
SgeI CNNG 2 cut(s) 43, 132
Sse9I AATT 2 cut(s) 54, 124
TaiI ACGT 1 cut(s) 22
TaqI TCGA 1 cut(s) 32
TasI AATT 2 cut(s) 54, 124
TatI WGTACW 1 cut(s) 142
TspDTI ATGAA 1 cut(s) 87
XapI RAATTY 1 cut(s) 54
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.