RCHIOBHM_CPG0502841

50S ribosomal protein L32

Basic Information

Type: gene
Biological Identity
rosa_chinensis
Pt
Physical Location & Seq
Reverse (-)
154133 .. 154999
867 bp
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UTR
Exon/CDS
Intron
PRQ15744

Sequence Viewer

Length: 159 bp
ATGGCAGTGCCAAAAAAGCGCACCTCTAGTTCAAAAAAACGTATTCGTAAAAATATTTGGAAAAGGAAAGGGTATTGGGCAGCATTGAAAGCTTTTTCGTTAGCGAAATCTCTTTCTACCGGTAGCTCAAAAAGTTTTTTTTGTGTGACAAATAAATAA
Functional Annotation

Protein Analysis

52

Amino Acids

5.91

Weight (kDa)

11.66

Isoelectric Point (pI)

41.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0020878)

Species Orthologous Gene IDs
arabidopsis_thaliana ATCG01020
rosa_chinensis RchiOBHm_Chr4g0421191 RchiOBHm_CPg0502841
rosa_wichuraiana Rw4G018810 Rw4G020390

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgeI ACCGGT 1 cut(s) 119
AgsI TTSAA 2 cut(s) 33, 88
AluBI AGCT 2 cut(s) 92, 126
AluI AGCT 2 cut(s) 92, 126
ApeKI GCWGC 1 cut(s) 80
AsiGI ACCGGT 1 cut(s) 119
AspLEI GCGC 1 cut(s) 21
BbvI GCAGC 1 cut(s) 92
BfaI CTAG 1 cut(s) 27
BisI GCNGC 1 cut(s) 81
BlsI GCNGC 1 cut(s) 82
BsaWI WCCGGW 1 cut(s) 119
Bse118I RCCGGY 1 cut(s) 119
BseXI GCAGC 1 cut(s) 92
BshTI ACCGGT 1 cut(s) 119
BsiSI CCGG 1 cut(s) 120
BsrFI RCCGGY 1 cut(s) 119
BssAI RCCGGY 1 cut(s) 119
BstHHI GCGC 1 cut(s) 21
BstMWI GCNNNNNNNGC 2 cut(s) 16, 89
BstV1I GCAGC 1 cut(s) 92
BtsI GCAGTG 1 cut(s) 12
BtsIMutI CAGTG 1 cut(s) 12
CfoI GCGC 1 cut(s) 21
Cfr10I RCCGGY 1 cut(s) 119
CspAI ACCGGT 1 cut(s) 119
CviJI RGCY 2 cut(s) 92, 126
CviKI_1 RGCY 2 cut(s) 92, 126
Fnu4HI GCNGC 1 cut(s) 81
Fsp4HI GCNGC 1 cut(s) 81
FspBI CTAG 1 cut(s) 27
GlaI GCGC 1 cut(s) 20
GluI GCNGC 1 cut(s) 81
HapII CCGG 1 cut(s) 120
HhaI GCGC 1 cut(s) 21
Hin6I GCGC 1 cut(s) 19
HinP1I GCGC 1 cut(s) 19
HindIII AAGCTT 1 cut(s) 90
HpaII CCGG 1 cut(s) 120
HpyCH4IV ACGT 1 cut(s) 40
HpyF10VI GCNNNNNNNGC 2 cut(s) 16, 89
HpySE526I ACGT 1 cut(s) 40
HspAI GCGC 1 cut(s) 19
LpnPI CCDG 1 cut(s) 133
Lsp1109I GCAGC 1 cut(s) 92
MaeI CTAG 1 cut(s) 27
MaeII ACGT 1 cut(s) 40
MaeIII GTNAC 1 cut(s) 145
MnlI CCTC 1 cut(s) 34
MspI CCGG 1 cut(s) 120
MwoI GCNNNNNNNGC 2 cut(s) 16, 89
NmuCI GTSAC 1 cut(s) 145
PinAI ACCGGT 1 cut(s) 119
PkrI GCNGC 1 cut(s) 82
SatI GCNGC 1 cut(s) 81
SetI ASST 4 cut(s) 26, 43, 94, 128
SgeI CNNG 2 cut(s) 39, 132
SspI AATATT 1 cut(s) 55
SspMI CTAG 1 cut(s) 27
TaiI ACGT 1 cut(s) 43
TscAI CASTG 1 cut(s) 12
TseFI GTSAC 1 cut(s) 145
TseI GCWGC 1 cut(s) 80
Tsp45I GTSAC 1 cut(s) 145
TspRI CASTG 1 cut(s) 12
XspI CTAG 1 cut(s) 27
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.