disease resistance
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g18120 |
| rosa_samantha | Rh2AG203800 Rh2AG204100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 131 |
| AfaI | GTAC | 2 cut(s) | 21, 180 |
| AgsI | TTSAA | 2 cut(s) | 157, 256 |
| AluBI | AGCT | 4 cut(s) | 91, 99, 219, 244 |
| AluI | AGCT | 4 cut(s) | 91, 99, 219, 244 |
| Alw26I | GTCTC | 1 cut(s) | 218 |
| ApoI | RAATTY | 1 cut(s) | 131 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 90 |
| AspA2I | CCTAGG | 1 cut(s) | 160 |
| AvrII | CCTAGG | 1 cut(s) | 160 |
| BciVI | GTATCC | 1 cut(s) | 25 |
| BcoDI | GTCTC | 1 cut(s) | 218 |
| BfaI | CTAG | 2 cut(s) | 161, 216 |
| BfuI | GTATCC | 1 cut(s) | 25 |
| BlnI | CCTAGG | 1 cut(s) | 160 |
| BmiI | GGNNCC | 1 cut(s) | 236 |
| BsaJI | CCNNGG | 1 cut(s) | 160 |
| BseDI | CCNNGG | 1 cut(s) | 160 |
| BseRI | GAGGAG | 2 cut(s) | 20, 161 |
| BsmAI | GTCTC | 1 cut(s) | 218 |
| BsmBI | CGTCTC | 1 cut(s) | 218 |
| BspLI | GGNNCC | 1 cut(s) | 236 |
| BssECI | CCNNGG | 1 cut(s) | 160 |
| BssT1I | CCWWGG | 1 cut(s) | 160 |
| Bst6I | CTCTTC | 1 cut(s) | 30 |
| BstDEI | CTNAG | 2 cut(s) | 63, 249 |
| BstMAI | GTCTC | 1 cut(s) | 218 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 241 |
| BsuI | GTATCC | 1 cut(s) | 25 |
| Csp6I | GTAC | 2 cut(s) | 20, 179 |
| CviAII | CATG | 1 cut(s) | 125 |
| CviJI | RGCY | 5 cut(s) | 91, 99, 219, 235, 244 |
| CviKI_1 | RGCY | 5 cut(s) | 91, 99, 219, 235, 244 |
| CviQI | GTAC | 2 cut(s) | 20, 179 |
| DdeI | CTNAG | 2 cut(s) | 63, 249 |
| Eam1104I | CTCTTC | 1 cut(s) | 30 |
| EarI | CTCTTC | 1 cut(s) | 30 |
| Eco130I | CCWWGG | 1 cut(s) | 160 |
| EcoT14I | CCWWGG | 1 cut(s) | 160 |
| ErhI | CCWWGG | 1 cut(s) | 160 |
| Esp3I | CGTCTC | 1 cut(s) | 218 |
| FaeI | CATG | 1 cut(s) | 128 |
| FaiI | YATR | 4 cut(s) | 47, 114, 126, 265 |
| FatI | CATG | 1 cut(s) | 124 |
| FspBI | CTAG | 2 cut(s) | 161, 216 |
| Hin1II | CATG | 1 cut(s) | 128 |
| HindIII | AAGCTT | 2 cut(s) | 89, 97 |
| Hpy188I | TCNGA | 1 cut(s) | 78 |
| HpyAV | CCTTC | 1 cut(s) | 250 |
| HpyCH4IV | ACGT | 1 cut(s) | 227 |
| HpyCH4V | TGCA | 1 cut(s) | 116 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 241 |
| HpyF3I | CTNAG | 2 cut(s) | 63, 249 |
| HpySE526I | ACGT | 1 cut(s) | 227 |
| Hsp92II | CATG | 1 cut(s) | 128 |
| LmnI | GCTCC | 1 cut(s) | 240 |
| LpnPI | CCDG | 1 cut(s) | 102 |
| MaeI | CTAG | 2 cut(s) | 161, 216 |
| MaeII | ACGT | 1 cut(s) | 227 |
| MaeIII | GTNAC | 1 cut(s) | 205 |
| MboII | GAAGA | 2 cut(s) | 38, 47 |
| MluCI | AATT | 1 cut(s) | 131 |
| MnlI | CCTC | 2 cut(s) | 139, 142 |
| MroXI | GAANNNNTTC | 1 cut(s) | 90 |
| MseI | TTAA | 1 cut(s) | 230 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 241 |
| NlaIII | CATG | 1 cut(s) | 128 |
| NlaIV | GGNNCC | 1 cut(s) | 236 |
| PdmI | GAANNNNTTC | 1 cut(s) | 90 |
| PspN4I | GGNNCC | 1 cut(s) | 236 |
| RsaI | GTAC | 2 cut(s) | 21, 180 |
| RsaNI | GTAC | 2 cut(s) | 20, 179 |
| SaqAI | TTAA | 1 cut(s) | 230 |
| SgeI | CNNG | 9 cut(s) | 35, 108, 112, 129, 137, 173, 195, 228, 232 |
| Sse9I | AATT | 1 cut(s) | 131 |
| SspMI | CTAG | 2 cut(s) | 161, 216 |
| StyI | CCWWGG | 1 cut(s) | 160 |
| TaiI | ACGT | 1 cut(s) | 230 |
| TaqI | TCGA | 1 cut(s) | 195 |
| TasI | AATT | 1 cut(s) | 131 |
| Tru1I | TTAA | 1 cut(s) | 230 |
| Tru9I | TTAA | 1 cut(s) | 230 |
| TspDTI | ATGAA | 2 cut(s) | 48, 126 |
| TspGWI | ACGGA | 2 cut(s) | 7, 227 |
| XapI | RAATTY | 1 cut(s) | 131 |
| XmaJI | CCTAGG | 1 cut(s) | 160 |
| XmnI | GAANNNNTTC | 1 cut(s) | 90 |
| XspI | CTAG | 2 cut(s) | 161, 216 |