FvH4_2g12620

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0015537
Physical Location & Seq
Forward (+)
11082038 .. 11090772
8735 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g12620.t3

Sequence Viewer

Length: 1782 bp
ATGGGGTGCTTTAAACCTATCAGCTTCTTCTGCTCTGTTTTCTTCTTCGCCATACTTGCCTGCATTTTGTTGTTGCAGTCTGAGGTTGAAGCTAAAGAGCTATACTATGATTTTGTTCTCAAAGAAGCCAATTTCACAAAGTTATGCAGCACAAAGAGTGCAATGGTTGTAAACGGAAGTTTTCCGGGGCCGGTGATTACGGCTCGCAAAGGGGATACTGTCTATGTCAATGTGCACAATGAAGGAACATATGGTGTCACCATTCACTGGCATGGGATAAAGCAACCAAGAAATCCATGGTTTGATGGACCCGAATATATTACACAATGCCCTATTCAGCCTGGAACCAATTTCACGTATACGGTGCTTCTCTCTTCAGAAGAAGGCACATTGTTTTGGCATGCCCATAGCGATTGGACTCGAGCCACGGTTCATGGAGCCTTCGTCATTTTGCCCGCAGAAAACACAACCTATCCATTTCCAGAGCCAGACCACGAAGCAGTTCTTGTTTTCGCGTCATGGTATAAAGAAGATGTGCCAACATTGATGGACGAGGCTCTCAAATATGGTGGATTAACAACATTGTCCGACTCTTATGCTATCAATGGTCAGCCAGGAGATTTTTACGAATGTTCCAACGAAACAACGTTTCGATTAGCGGTTGATCATGGGAGTACCTATCTTCTCCGTTTAGTGAATTCGGTACAAAACACAGACATGTTCTTCGCCATAGCTGATCATAATCTCACACTTGTGGGCGTGGACGGCAACTATGTCAAACCTTTTGTTACCAACTACCTAATGATCACCCCAGGAGAAACAATGGACATTTTGGTCACAGCGACCCAACCTCTCGGCCATTACTACATGCTTATAAGTCCTTACTTCGATGGACAAGCTGACGACTTCGACAAAAGCGTCACCAGCGCCATATTTCAGTACAACGGCAACTACACTCCTCCTACATCACCCATCTACCCAGACCATATTCCTGGCTTCTATGACGTTGACGCTGCACGCAACTTCGACAGACAGTTGAAGAGTTTGGCCTCTCTGGAGCACCCTGCAAATGTTCCTCAGCATATCACTACCAGGATGTTTATTACCCTCTCCATTGGCATGCTGCGATGTCCGAATGACTCGTGTGATGGACCTGATGGAAATCGACTTGCGTCTGCCTTGAACAACATCAGCTTTGCCAACCCTGCCATTGATGTGCTGCAAGCATACTACAGGAACATGAGTAGATATTTCCAAGCAGATTTCCCAGACAGGCCACCTACTCTATTCAACTTCACCGCAGATGAGTTGATGACTGACAACATTACGTTGAGTGACCAAGGAACCAAGGTGAAGATGTTGAATTACAACGAGACAGTGGAAATAATATTCCAAGGGACAAATGTGATGAACTCAGGAGAGAATCATCCTGTGCATTTGCATGGATTCAAGTTTTTTGTGGTTGGAGCTGGCGTCGGGAATTTCGACAATGAGACTGATCCCTTAACTTACAATTTGATTGATCCACCAGAACTTAATACCTTCCCAGTTCCTAAGGATGGATGGGCCGTCATCAGATTCGTAGCAGACAACCCAGGGGTGTGGTTCATGCACTGCCATTTCGATCGGCATATGAGTTGGGGCATGGATACCGCTTTCATAGTGAGGAATGGAGACACGGAGGAGACGAGTGTTCGCCCTCCACCGGAATACATGCCTTCTTGTGGCGAAAATTCCATATACAGTGGTGATGAGCAGTCGATGTTTAAGTTGGAGGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

594

Amino Acids

66.67

Weight (kDa)

4.72

Isoelectric Point (pI)

37.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 41 - 153 2.2e-39 Multicopper oxidase
Cu-oxidase PF00394 167 - 317 1e-37 Multicopper oxidase
Cu-oxidase_2 PF07731 421 - 537 1.2e-27 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015537)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g12620 FvH4_2g12620 FvH4_2g12620
malus_domestica MD00G1014900.v1.1
prunus_persica Prupe.8G047000_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0273241
rosa_laevigata RLG00000013628
rosa_multiflora Rmu_sc0000239.1_g000030
rosa_roxburghii Rroxscaffold_7G00195530 Rroxscaffold_7G00195540
rosa_rugosa Rorug06G0073700
rosa_samantha Rh6AG189200 Rh6BG192400 Rh6DG183200
rosa_wichuraiana Rw6G016400 Rw6G016460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 875
AasI GACNNNNNNGTC 2 cut(s) 833, 917
AccB7I CCANNNNNTGG 1 cut(s) 267
AccI GTMKAC 1 cut(s) 359
AccII CGCG 1 cut(s) 515
AciI CCGC 4 cut(s) 456, 659, 1299, 1653
AclI AACGTT 1 cut(s) 647
AclWI GGATC 2 cut(s) 1493, 1517
AcoI YGGCCR 1 cut(s) 856
AcsI RAATTY 3 cut(s) 697, 1480, 1732
AcuI CTGAAG 1 cut(s) 360
AcyI GRCGYC 1 cut(s) 1473
AfaI GTAC 3 cut(s) 676, 705, 941
AfiI CCNNNNNNNGG 4 cut(s) 267, 1559, 1705, 1724
AflIII ACRYGT 1 cut(s) 717
AgsI TTSAA 6 cut(s) 89, 1039, 1183, 1291, 1363, 1450
AjnI CCWGG 6 cut(s) 340, 613, 811, 991, 1091, 1594
AleI CACNNNNGTG 1 cut(s) 752
AluBI AGCT 7 cut(s) 24, 92, 100, 734, 899, 1194, 1469
AluI AGCT 7 cut(s) 24, 92, 100, 734, 899, 1194, 1469
Alw21I GWGCWC 2 cut(s) 237, 1062
Alw26I GTCTC 4 cut(s) 1367, 1487, 1668, 1679
Alw44I GTGCAC 1 cut(s) 233
AlwI GGATC 2 cut(s) 1493, 1517
Ama87I CYCGRG 1 cut(s) 420
AoxI GGCC 5 cut(s) 188, 856, 1047, 1274, 1566
ApaLI GTGCAC 1 cut(s) 233
ApeKI GCWGC 4 cut(s) 147, 1013, 1123, 1219
ApoI RAATTY 3 cut(s) 697, 1480, 1732
ArsI GACNNNNNNTTYG 2 cut(s) 707, 739
Asp700I GAANNNNTTC 1 cut(s) 501
AspLEI GCGC 1 cut(s) 929
AspS9I GGNCC 4 cut(s) 188, 308, 1151, 1566
AsuC2I CCSGG 1 cut(s) 186
AsuHPI GGTGA 8 cut(s) 205, 250, 799, 913, 960, 1288, 1363, 1760
AvaI CYCGRG 1 cut(s) 420
AvaII GGWCC 2 cut(s) 308, 1151
AxyI CCTNAGG 1 cut(s) 1554
BaeGI GKGCMC 1 cut(s) 237
BauI CACGAG 1 cut(s) 1141
Bbv12I GWGCWC 2 cut(s) 237, 1062
BbvCI CCTCAGC 1 cut(s) 1077
BbvI GCAGC 4 cut(s) 159, 1000, 1110, 1206
BccI CCATC 8 cut(s) 299, 541, 884, 980, 1142, 1151, 1553, 1557
BceAI ACGGC 4 cut(s) 216, 781, 961, 1553
BcgI CGANNNNNNTGC 2 cut(s) 578, 612
BciT130I CCWGG 6 cut(s) 342, 615, 813, 993, 1093, 1596
BciVI GTATCC 2 cut(s) 208, 1642
BclI TGATCA 3 cut(s) 664, 736, 804
BcnI CCSGG 1 cut(s) 186
BcoDI GTCTC 4 cut(s) 1367, 1487, 1668, 1679
BfmI CTRYAG 1 cut(s) 1231
BfoI RGCGCY 1 cut(s) 930
BfuI GTATCC 2 cut(s) 208, 1642
BisI GCNGC 4 cut(s) 148, 1014, 1124, 1220
BlsI GCNGC 4 cut(s) 149, 1015, 1125, 1221
Bme1390I CCNGG 7 cut(s) 186, 342, 615, 813, 993, 1093, 1596
Bme18I GGWCC 2 cut(s) 308, 1151
BmeT110I CYCGRG 1 cut(s) 420
BmgT120I GGNCC 4 cut(s) 188, 308, 1151, 1566
BmiI GGNNCC 5 cut(s) 189, 310, 346, 439, 1345
BmrFI CCNGG 7 cut(s) 186, 342, 615, 813, 993, 1093, 1596
BmrI ACTGGG 1 cut(s) 1541
BmuI ACTGGG 1 cut(s) 1541
BoxI GACNNNNGTC 1 cut(s) 1171
BpmI CTGGAG 1 cut(s) 1076
Bpu10I CCTNAGC 1 cut(s) 1077
BpuMI CCSGG 1 cut(s) 186
BsaAI YACGTR 1 cut(s) 357
BsaBI GATNNNNATC 2 cut(s) 741, 1161
BsaHI GRCGYC 1 cut(s) 1473
BsaJI CCNNGG 9 cut(s) 185, 296, 426, 811, 1339, 1347, 1393, 1594, 1595
BsaWI WCCGGW 1 cut(s) 1705
BsaXI ACNNNNNCTCC 4 cut(s) 429, 459, 1458, 1488
Bsc4I CCNNNNNNNGG 4 cut(s) 267, 1559, 1705, 1724
Bse118I RCCGGY 1 cut(s) 190
Bse1I ACTGG 2 cut(s) 272, 1547
Bse21I CCTNAGG 1 cut(s) 1554
Bse3DI GCAATG 1 cut(s) 168
Bse8I GATNNNNATC 2 cut(s) 741, 1161
BseBI CCWGG 6 cut(s) 342, 615, 813, 993, 1093, 1596
BseDI CCNNGG 9 cut(s) 185, 296, 426, 811, 1339, 1347, 1393, 1594, 1595
BseGI GGATG 4 cut(s) 1101, 1426, 1564, 1568
BseJI GATNNNNATC 2 cut(s) 741, 1161
BseLI CCNNNNNNNGG 4 cut(s) 267, 1559, 1705, 1724
BseMI GCAATG 1 cut(s) 168
BseMII CTCAG 3 cut(s) 72, 1091, 1428
BseNI ACTGG 2 cut(s) 272, 1547
BseRI GAGGAG 2 cut(s) 948, 1697
BseSI GKGCMC 1 cut(s) 237
BseXI GCAGC 4 cut(s) 159, 1000, 1110, 1206
BsgI GTGCAG 1 cut(s) 999
Bsh1236I CGCG 1 cut(s) 515
Bsh1285I CGRYCG 1 cut(s) 1627
BshFI GGCC 5 cut(s) 190, 858, 1049, 1276, 1568
BsiEI CGRYCG 1 cut(s) 1627
BsiHKAI GWGCWC 2 cut(s) 237, 1062
BsiHKCI CYCGRG 1 cut(s) 420
BsiSI CCGG 3 cut(s) 185, 191, 1706
BslFI GGGAC 1 cut(s) 1411
BslI CCNNNNNNNGG 4 cut(s) 267, 1559, 1705, 1724
BsmAI GTCTC 4 cut(s) 1367, 1487, 1668, 1679
BsmBI CGTCTC 1 cut(s) 1679
BsmFI GGGAC 1 cut(s) 1411
BsnI GGCC 5 cut(s) 190, 858, 1049, 1276, 1568
BsoBI CYCGRG 1 cut(s) 420
Bsp1286I GDGCHC 2 cut(s) 237, 1062
Bsp143I GATC 6 cut(s) 664, 736, 804, 1498, 1522, 1624
Bsp19I CCATGG 1 cut(s) 296
BspACI CCGC 4 cut(s) 456, 659, 1299, 1653
BspANI GGCC 5 cut(s) 190, 858, 1049, 1276, 1568
BspCNI CTCAG 3 cut(s) 73, 1090, 1427
BspFNI CGCG 1 cut(s) 515
BspLI GGNNCC 5 cut(s) 189, 310, 346, 439, 1345
BspPI GGATC 2 cut(s) 1493, 1517
BsrDI GCAATG 1 cut(s) 168
BsrFI RCCGGY 1 cut(s) 190
BsrI ACTGG 2 cut(s) 272, 1547
BssAI RCCGGY 1 cut(s) 190
BssECI CCNNGG 9 cut(s) 185, 296, 426, 811, 1339, 1347, 1393, 1594, 1595
BssMI GATC 6 cut(s) 664, 736, 804, 1498, 1522, 1624
BssNAI GTATAC 1 cut(s) 360
BssNI GRCGYC 1 cut(s) 1473
BssSI CACGAG 1 cut(s) 1141
BssT1I CCWWGG 4 cut(s) 296, 1339, 1347, 1393
Bst1107I GTATAC 1 cut(s) 360
Bst2BI CACGAG 1 cut(s) 1141
Bst2UI CCWGG 6 cut(s) 342, 615, 813, 993, 1093, 1596
Bst4CI ACNGT 6 cut(s) 220, 364, 430, 1035, 1378, 1745
Bst6I CTCTTC 2 cut(s) 379, 1034
BstACI GRCGYC 1 cut(s) 1473
BstBAI YACGTR 1 cut(s) 357
BstC8I GCNNGC 8 cut(s) 61, 205, 402, 456, 1018, 1121, 1224, 1471
BstDEI CTNAG 4 cut(s) 81, 1077, 1414, 1554
BstDSI CCRYGG 2 cut(s) 296, 426
BstF5I GGATG 4 cut(s) 1101, 1426, 1564, 1568
BstFNI CGCG 1 cut(s) 515
BstH2I RGCGCY 1 cut(s) 930
BstHHI GCGC 1 cut(s) 929
BstKTI GATC 6 cut(s) 667, 739, 807, 1501, 1525, 1627
BstMAI GTCTC 4 cut(s) 1367, 1487, 1668, 1679
BstMBI GATC 6 cut(s) 664, 736, 804, 1498, 1522, 1624
BstMCI CGRYCG 1 cut(s) 1627
BstMWI GCNNNNNNNGC 5 cut(s) 30, 56, 765, 924, 1205
BstNI CCWGG 6 cut(s) 342, 615, 813, 993, 1093, 1596
BstNSI RCATGY 5 cut(s) 404, 721, 871, 1123, 1717
BstPAI GACNNNNGTC 1 cut(s) 1171
BstSCI CCNGG 7 cut(s) 184, 340, 613, 811, 991, 1091, 1594
BstSFI CTRYAG 1 cut(s) 1231
BstSLI GKGCMC 1 cut(s) 237
BstUI CGCG 1 cut(s) 515
BstV1I GCAGC 4 cut(s) 159, 1000, 1110, 1206
BstXI CCANNNNNNTGG 2 cut(s) 992, 1602
BstZ17I GTATAC 1 cut(s) 360
Bsu36I CCTNAGG 1 cut(s) 1554
BsuI GTATCC 2 cut(s) 208, 1642
BsuRI GGCC 5 cut(s) 190, 858, 1049, 1276, 1568
BtgI CCRYGG 2 cut(s) 296, 426
BtgZI GCGATG 1 cut(s) 1141
BtsCI GGATG 4 cut(s) 1101, 1426, 1564, 1568
BtsI GCAGTG 1 cut(s) 1612
BtsIMutI CAGTG 4 cut(s) 265, 1383, 1612, 1750
Cac8I GCNNGC 8 cut(s) 61, 205, 402, 456, 1018, 1121, 1224, 1471
CfoI GCGC 1 cut(s) 929
Cfr10I RCCGGY 1 cut(s) 190
Cfr13I GGNCC 4 cut(s) 188, 308, 1151, 1566
CseI GACGC 5 cut(s) 504, 907, 1019, 1161, 1462
Csp6I GTAC 3 cut(s) 675, 704, 940
CspCI CAANNNNNGTGG 2 cut(s) 550, 585
CviQI GTAC 3 cut(s) 675, 704, 940
DdeI CTNAG 4 cut(s) 81, 1077, 1414, 1554
DpnI GATC 6 cut(s) 666, 738, 806, 1500, 1524, 1626
DpnII GATC 6 cut(s) 664, 736, 804, 1498, 1522, 1624
DraI TTTAAA 1 cut(s) 13
DrdI GACNNNNNNGTC 2 cut(s) 833, 917
DseDI GACNNNNNNGTC 2 cut(s) 833, 917
EaeI YGGCCR 1 cut(s) 856
Eam1104I CTCTTC 2 cut(s) 379, 1034
EarI CTCTTC 2 cut(s) 379, 1034
Eco130I CCWWGG 4 cut(s) 296, 1339, 1347, 1393
Eco47I GGWCC 2 cut(s) 308, 1151
Eco57I CTGAAG 1 cut(s) 360
Eco81I CCTNAGG 1 cut(s) 1554
Eco88I CYCGRG 1 cut(s) 420
EcoRI GAATTC 1 cut(s) 697
EcoRII CCWGG 6 cut(s) 340, 613, 811, 991, 1091, 1594
EcoT14I CCWWGG 4 cut(s) 296, 1339, 1347, 1393
ErhI CCWWGG 4 cut(s) 296, 1339, 1347, 1393
Esp3I CGTCTC 1 cut(s) 1679
FalI AAGNNNNNCTT 2 cut(s) 489, 521
FaqI GGGAC 1 cut(s) 1411
FauI CCCGC 1 cut(s) 463
FauNDI CATATG 2 cut(s) 250, 1632
FbaI TGATCA 3 cut(s) 664, 736, 804
FblI GTMKAC 1 cut(s) 359
Fnu4HI GCNGC 4 cut(s) 148, 1014, 1124, 1220
FokI GGATG 4 cut(s) 1108, 1413, 1571, 1575
Fsp4HI GCNGC 4 cut(s) 148, 1014, 1124, 1220
GlaI GCGC 1 cut(s) 928
GluI GCNGC 4 cut(s) 148, 1014, 1124, 1220
GsuI CTGGAG 1 cut(s) 1076
HaeII RGCGCY 1 cut(s) 930
HaeIII GGCC 5 cut(s) 190, 858, 1049, 1276, 1568
HapII CCGG 3 cut(s) 185, 191, 1706
HgaI GACGC 5 cut(s) 504, 907, 1019, 1161, 1462
HhaI GCGC 1 cut(s) 929
Hin1I GRCGYC 1 cut(s) 1473
Hin6I GCGC 1 cut(s) 927
HinP1I GCGC 1 cut(s) 927
HincII GTYRAC 1 cut(s) 1009
HindII GTYRAC 1 cut(s) 1009
HinfI GANTC 6 cut(s) 418, 590, 1139, 1423, 1446, 1578
HpaII CCGG 3 cut(s) 185, 191, 1706
HphI GGTGA 8 cut(s) 205, 250, 799, 913, 960, 1288, 1363, 1760
Hpy166II GTNNAC 5 cut(s) 172, 235, 360, 763, 1009
Hpy188I TCNGA 5 cut(s) 82, 379, 589, 1134, 1577
Hpy188III TCNNGA 4 cut(s) 482, 1055, 1416, 1477
Hpy8I GTNNAC 5 cut(s) 172, 235, 360, 763, 1009
Hpy99I CGWCG 1 cut(s) 1478
HpyAV CCTTC 5 cut(s) 236, 377, 451, 1552, 1728
HpyCH4III ACNGT 6 cut(s) 220, 364, 430, 1035, 1378, 1745
HpyCH4IV ACGT 4 cut(s) 356, 647, 1005, 1328
HpyF10VI GCNNNNNNNGC 5 cut(s) 30, 56, 765, 924, 1205
HpyF3I CTNAG 4 cut(s) 81, 1077, 1414, 1554
HpySE526I ACGT 4 cut(s) 356, 647, 1005, 1328
Hsp92I GRCGYC 1 cut(s) 1473
HspAI GCGC 1 cut(s) 927
Ksp22I TGATCA 3 cut(s) 664, 736, 804
Kzo9I GATC 6 cut(s) 664, 736, 804, 1498, 1522, 1624
LmnI GCTCC 3 cut(s) 437, 1057, 1466
Lsp1109I GCAGC 4 cut(s) 159, 1000, 1110, 1206
MaeII ACGT 4 cut(s) 356, 647, 1005, 1328
MaeIII GTNAC 5 cut(s) 256, 787, 835, 919, 1334
MalI GATC 6 cut(s) 666, 738, 806, 1500, 1524, 1626
MboI GATC 6 cut(s) 664, 736, 804, 1498, 1522, 1624
MhlI GDGCHC 2 cut(s) 237, 1062
MluCI AATT 7 cut(s) 130, 349, 697, 1363, 1480, 1513, 1732
MlyI GAGTC 3 cut(s) 412, 584, 1133
MmeI TCCRAC 4 cut(s) 612, 660, 1444, 1752
MroXI GAANNNNTTC 1 cut(s) 501
MseI TTAA 5 cut(s) 12, 575, 1505, 1536, 1767
MslI CAYNNNNRTG 6 cut(s) 270, 716, 752, 1118, 1214, 1440
MspI CCGG 3 cut(s) 185, 191, 1706
MspR9I CCNGG 7 cut(s) 186, 342, 615, 813, 993, 1093, 1596
MvaI CCWGG 6 cut(s) 342, 615, 813, 993, 1093, 1596
MvnI CGCG 1 cut(s) 515
MwoI GCNNNNNNNGC 5 cut(s) 30, 56, 765, 924, 1205
NciI CCSGG 1 cut(s) 186
NcoI CCATGG 1 cut(s) 296
NdeI CATATG 2 cut(s) 250, 1632
NdeII GATC 6 cut(s) 664, 736, 804, 1498, 1522, 1624
NlaIV GGNNCC 5 cut(s) 189, 310, 346, 439, 1345
NmeAIII GCCGAG 1 cut(s) 834
NmuCI GTSAC 4 cut(s) 256, 835, 919, 1334
NspI RCATGY 5 cut(s) 404, 721, 871, 1123, 1717
OliI CACNNNNGTG 1 cut(s) 752
PaeI GCATGC 2 cut(s) 404, 1123
PaeR7I CTCGAG 1 cut(s) 420
PasI CCCWGGG 1 cut(s) 1595
PciI ACATGT 1 cut(s) 717
PcsI WCGNNNNNNNCGW 3 cut(s) 915, 1482, 1685
PdmI GAANNNNTTC 1 cut(s) 501
PfeI GAWTC 3 cut(s) 1423, 1446, 1578
PflMI CCANNNNNTGG 1 cut(s) 267
PkrI GCNGC 4 cut(s) 149, 1015, 1125, 1221
Ple19I CGATCG 1 cut(s) 1627
PleI GAGTC 3 cut(s) 412, 584, 1133
PpsI GAGTC 3 cut(s) 412, 584, 1133
Ppu21I YACGTR 1 cut(s) 357
PscI ACATGT 1 cut(s) 717
PshAI GACNNNNGTC 1 cut(s) 1171
PsiI TTATAA 1 cut(s) 875
Psp1406I AACGTT 1 cut(s) 647
Psp6I CCWGG 6 cut(s) 340, 613, 811, 991, 1091, 1594
PspGI CCWGG 6 cut(s) 340, 613, 811, 991, 1091, 1594
PspN4I GGNNCC 5 cut(s) 189, 310, 346, 439, 1345
PspPI GGNCC 4 cut(s) 188, 308, 1151, 1566
PspXI VCTCGAGB 1 cut(s) 420
PvuI CGATCG 1 cut(s) 1627
RsaI GTAC 3 cut(s) 676, 705, 941
RsaNI GTAC 3 cut(s) 675, 704, 940
RseI CAYNNNNRTG 6 cut(s) 270, 716, 752, 1118, 1214, 1440
SaqAI TTAA 5 cut(s) 12, 575, 1505, 1536, 1767
SatI GCNGC 4 cut(s) 148, 1014, 1124, 1220
Sau3AI GATC 6 cut(s) 664, 736, 804, 1498, 1522, 1624
Sau96I GGNCC 4 cut(s) 188, 308, 1151, 1566
SchI GAGTC 3 cut(s) 412, 584, 1133
ScrFI CCNGG 7 cut(s) 186, 342, 615, 813, 993, 1093, 1596
SduI GDGCHC 2 cut(s) 237, 1062
SfcI CTRYAG 1 cut(s) 1231
Sfr274I CTCGAG 1 cut(s) 420
SinI GGWCC 2 cut(s) 308, 1151
SlaI CTCGAG 1 cut(s) 420
SmiMI CAYNNNNRTG 6 cut(s) 270, 716, 752, 1118, 1214, 1440
SmlI CTYRAG 1 cut(s) 420
SmoI CTYRAG 1 cut(s) 420
SphI GCATGC 2 cut(s) 404, 1123
Sse9I AATT 7 cut(s) 130, 349, 697, 1363, 1480, 1513, 1732
SsiI CCGC 4 cut(s) 456, 659, 1299, 1653
SspI AATATT 1 cut(s) 1389
StyD4I CCNGG 7 cut(s) 184, 340, 613, 811, 991, 1091, 1594
StyI CCWWGG 4 cut(s) 296, 1339, 1347, 1393
TaaI ACNGT 6 cut(s) 220, 364, 430, 1035, 1378, 1745
TaiI ACGT 4 cut(s) 359, 650, 1008, 1331
TaqI TCGA 9 cut(s) 421, 652, 888, 909, 1026, 1165, 1485, 1623, 1760
TasI AATT 7 cut(s) 130, 349, 697, 1363, 1480, 1513, 1732
TatI WGTACW 1 cut(s) 939
TfiI GAWTC 3 cut(s) 1423, 1446, 1578
Tru1I TTAA 5 cut(s) 12, 575, 1505, 1536, 1767
Tru9I TTAA 5 cut(s) 12, 575, 1505, 1536, 1767
TscAI CASTG 4 cut(s) 272, 1383, 1619, 1750
TseFI GTSAC 4 cut(s) 256, 835, 919, 1334
TseI GCWGC 4 cut(s) 147, 1013, 1123, 1219
Tsp45I GTSAC 4 cut(s) 256, 835, 919, 1334
TspDTI ATGAA 5 cut(s) 255, 422, 1424, 1597, 1648
TspGWI ACGGA 3 cut(s) 189, 677, 1694
TspRI CASTG 4 cut(s) 272, 1383, 1619, 1750
Van91I CCANNNNNTGG 1 cut(s) 267
VneI GTGCAC 1 cut(s) 233
VpaK11BI GGWCC 2 cut(s) 308, 1151
XapI RAATTY 3 cut(s) 697, 1480, 1732
XceI RCATGY 5 cut(s) 404, 721, 871, 1123, 1717
XcmI CCANNNNNNNNNTGG 1 cut(s) 294
XhoI CTCGAG 1 cut(s) 420
XmiI GTMKAC 1 cut(s) 359
XmnI GAANNNNTTC 1 cut(s) 501
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.