MD00G1014900.v1.1

Lignin degradation and detoxification of lignin-derived products

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
OG0015537
Physical Location & Seq
Forward (+)
2149360 .. 2151994
2635 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1014900.v1.1.491

Sequence Viewer

Length: 1785 bp
ATGGAGTGCTTATTCAAAACAACGGGCTTCTTCTTCTTAGCTCTTATGTCTACTTTGCTCCTCCAAACTCAGGTGTTTTCCTGCTTGGCTCAAGGAAACGTTCATTCCTATGACTTTGTTCTCAAGGACACCAACTTTACAAAGTTATGTAGCACAAAGAGTGCATTTACTGTGAACGACAGTTTTCCGGGGCCGGTGATCCGAGCTCAAAAGGGAGATACGGTCTATGTGAATGTTTACAATCAAGGAAGATATGGTGTCACTATGCACTGGCATGGGATAAAGCAGCCTAGAAATCCATGGTTCGATGGACCTGAGTATATCACACAATGCCCTATTCAACCTGGAACAAATTTCACATACCAAATCCTACTTTCATCCGAAGAAGGTACATTGTTTTGGCATGCTCATAGTGATTGGTCTCGGGCCACTGTACATGGAGCATTTCTCATCTTGCCAGCAAATGGAACCAGTTATCCATTTCCAAAACCAGATGAAGAACAGGTTATTGTATTTGCATCCTGGTATAAAGATGATGTAATGACATTGCTGGATGAGACCCTCGAATCTGGCGGACTAACAACGTCATCAGATTCTTATGTAATCAACGGCGAACCAGGAGATTTTTACTCATGCTCCAAAGAAACGACATATCGAATGTCTGTTGATTATGGAAAAACCTATCTTCTCCGAATAGTCAATTCGGTGCAAAACATAGACATGTTCTTCGCCATTGCGGATCACAATCTCATACTCGTGGGTATGGATGGTTCTTATGTCAAACCTATAGTTTCCAGTTACATAATGATCACCCCAGGACAAACAATGGATGTTTTAGTCGCAGCAAACAAATCTCTTGGGCATTACTACATGTTTGCCAGTCCTTATTATGATGGAGAGGCTGATGACTTTGACAAAAGTATTGCTAGCGCCATATTCCAATACAACGGCAACTACACTCCTCCTTCATCGCCCATCTATCCAACCAACATTCCCGGTTTTTATGACATTGGTTCTGCGAGCAACTTTGTGAAACAATTCAGGAGTTTGGCATCTGCAGAGCACTCGATTGACGTTCCACTGAATGTCACCACCCGAATGTTCGTAACAGTTTCCATAGGCATGTTGCATTGTCCTAACAGATCATGTGCTGGGCCCGAGGGAAATAGGATTTCTTCTGGGTTGAACAACATCAGTTTTGCCAACCCTGCTGTTGATGTTTTGCAAGCATACTACAGGAACATCAGTGGATATTACGACGCAAGTTTCCCAGACGAACCGCCCAATCTATTCAACTTCACTGCAGAAGAAATGAAAGCAGACAATTATAGTATTACTGATCGGGGTACCAAGGTGAAGATGCTGGATTATAATGCCACAGTCGAAATAACATTTCAAGGAACCAATGTTATGGACTCAGCAGAGAATCATCCAGTTCATTTGCATGGATTCAGGTTTTATGTCATTGGATCTGGTCTGGGAAATTTCGATAATGTTACTGATCCATTAACATACAACTTGATTGATCCACCTGAAGTTAATACCTTCTCAGTTCCTAAGGATGGTTGGGCCACCATTAGATTCATAGCTAACAATCCAGGAGTTTGGTTCATGCACTGCCATTTTGATCGACATATGAGTTGGGGCATGGGAACTGTTTTCATAGTTAAGAATGGAGGAAGTGATGAGACAAGTATGCGCCCACCCCCTGATAACTTGCCTACTTGTGTCAAAAATTCACTATTTAAAACTTCCCACCAGTCAATTTTACGGTTGGGAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cu-oxidase Cu-oxidase_2 Cu-oxidase_3

Protein Analysis

595

Amino Acids

66.35

Weight (kDa)

5.23

Isoelectric Point (pI)

37.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cu-oxidase_3 PF07732 42 - 154 1.7e-38 Multicopper oxidase
Cu-oxidase PF00394 167 - 318 1.3e-35 Multicopper oxidase
Cu-oxidase_2 PF07731 423 - 558 2.9e-40 Multicopper oxidase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015537)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g12620 FvH4_2g12620 FvH4_2g12620
malus_domestica MD00G1014900.v1.1
prunus_persica Prupe.8G047000_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0273241
rosa_laevigata RLG00000013628
rosa_multiflora Rmu_sc0000239.1_g000030
rosa_roxburghii Rroxscaffold_7G00195530 Rroxscaffold_7G00195540
rosa_rugosa Rorug06G0073700
rosa_samantha Rh6AG189200 Rh6BG192400 Rh6DG183200
rosa_wichuraiana Rw6G016400 Rw6G016460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1371
Acc65I GGTACC 1 cut(s) 1346
AccB1I GGYRCC 1 cut(s) 1346
AccB7I CCANNNNNTGG 1 cut(s) 464
AccI GTMKAC 1 cut(s) 50
AciI CCGC 3 cut(s) 573, 737, 1280
AclI AACGTT 1 cut(s) 99
AclWI GGATC 5 cut(s) 193, 747, 1477, 1496, 1520
AcsI RAATTY 3 cut(s) 352, 1483, 1735
AcuI CTGAAG 1 cut(s) 1554
AfaI GTAC 3 cut(s) 391, 435, 1348
AfiI CCNNNNNNNGG 3 cut(s) 70, 464, 1562
AflIII ACRYGT 2 cut(s) 720, 870
AgsI TTSAA 5 cut(s) 16, 341, 1186, 1294, 1397
AjnI CCWGG 5 cut(s) 343, 521, 616, 814, 1597
AloI GAACNNNNNNTCC 2 cut(s) 460, 492
AluBI AGCT 3 cut(s) 41, 206, 1589
AluI AGCT 3 cut(s) 41, 206, 1589
Alw21I GWGCWC 2 cut(s) 208, 1065
Alw26I GTCTC 3 cut(s) 426, 551, 1682
AlwI GGATC 5 cut(s) 193, 747, 1477, 1496, 1520
Ama87I CYCGRG 2 cut(s) 423, 1157
AoxI GGCC 4 cut(s) 191, 426, 1154, 1569
ApaI GGGCCC 1 cut(s) 1158
ApeKI GCWGC 2 cut(s) 286, 842
ApoI RAATTY 3 cut(s) 352, 1483, 1735
ArsI GACNNNNNNTTYG 2 cut(s) 710, 742
Asp700I GAANNNNTTC 1 cut(s) 1037
Asp718I GGTACC 1 cut(s) 1346
AspLEI GCGC 2 cut(s) 932, 1701
AspS9I GGNCC 6 cut(s) 191, 311, 426, 1154, 1155, 1569
AsuC2I CCSGG 2 cut(s) 189, 996
AsuHPI GGTGA 4 cut(s) 208, 802, 1081, 1366
AsuNHI GCTAGC 1 cut(s) 926
AvaI CYCGRG 2 cut(s) 423, 1157
AvaII GGWCC 1 cut(s) 311
AxyI CCTNAGG 1 cut(s) 1557
BaeGI GKGCMC 1 cut(s) 1158
BaeI ACNNNNGTAYC 2 cut(s) 1338, 1371
BanI GGYRCC 1 cut(s) 1346
BanII GRGCYC 2 cut(s) 208, 1158
BauI CACGAG 1 cut(s) 755
Bbv12I GWGCWC 2 cut(s) 208, 1065
BbvI GCAGC 2 cut(s) 298, 854
BccI CCATC 5 cut(s) 302, 761, 887, 983, 1556
BceAI ACGGC 2 cut(s) 625, 964
BcgI CGANNNNNNTGC 2 cut(s) 1047, 1081
BciT130I CCWGG 5 cut(s) 345, 523, 618, 816, 1599
BclI TGATCA 1 cut(s) 807
BcnI CCSGG 2 cut(s) 189, 996
BcoDI GTCTC 3 cut(s) 426, 551, 1682
BfaI CTAG 2 cut(s) 291, 927
BfmI CTRYAG 4 cut(s) 786, 1056, 1234, 1302
BfoI RGCGCY 1 cut(s) 933
BisI GCNGC 2 cut(s) 287, 843
BlsI GCNGC 2 cut(s) 288, 844
Bme1390I CCNGG 7 cut(s) 189, 345, 523, 618, 816, 996, 1599
Bme18I GGWCC 1 cut(s) 311
BmeT110I CYCGRG 2 cut(s) 423, 1157
BmgT120I GGNCC 6 cut(s) 191, 311, 426, 1154, 1155, 1569
BmiI GGNNCC 5 cut(s) 192, 469, 1156, 1348, 1402
BmrFI CCNGG 7 cut(s) 189, 345, 523, 618, 816, 996, 1599
BmsI GCATC 3 cut(s) 527, 1061, 1350
BmtI GCTAGC 1 cut(s) 930
BplI GAGNNNNNCTC 2 cut(s) 432, 464
BpuEI CTTGAG 2 cut(s) 75, 107
BpuMI CCSGG 2 cut(s) 189, 996
BsaBI GATNNNNATC 1 cut(s) 744
BsaI GGTCTC 2 cut(s) 426, 551
BsaJI CCNNGG 5 cut(s) 188, 299, 814, 1158, 1350
BsaXI ACNNNNNCTCC 4 cut(s) 207, 237, 620, 650
Bsc4I CCNNNNNNNGG 3 cut(s) 70, 464, 1562
Bse118I RCCGGY 1 cut(s) 193
Bse1I ACTGG 6 cut(s) 275, 471, 795, 879, 1433, 1759
Bse21I CCTNAGG 1 cut(s) 1557
Bse3DI GCAATG 2 cut(s) 545, 732
Bse8I GATNNNNATC 1 cut(s) 744
BseBI CCWGG 5 cut(s) 345, 523, 618, 816, 1599
BseDI CCNNGG 5 cut(s) 188, 299, 814, 1158, 1350
BseGI GGATG 7 cut(s) 377, 518, 559, 772, 835, 1429, 1567
BseJI GATNNNNATC 1 cut(s) 744
BseLI CCNNNNNNNGG 3 cut(s) 70, 464, 1562
BseMI GCAATG 2 cut(s) 545, 732
BseMII CTCAG 4 cut(s) 83, 306, 1431, 1563
BseNI ACTGG 6 cut(s) 275, 471, 795, 879, 1433, 1759
BseRI GAGGAG 2 cut(s) 50, 951
BseSI GKGCMC 1 cut(s) 1158
BseXI GCAGC 2 cut(s) 298, 854
BseYI CCCAGC 1 cut(s) 1151
BshFI GGCC 4 cut(s) 193, 428, 1156, 1571
BshNI GGYRCC 1 cut(s) 1346
BsiHKAI GWGCWC 2 cut(s) 208, 1065
BsiHKCI CYCGRG 2 cut(s) 423, 1157
BsiSI CCGG 3 cut(s) 188, 194, 996
BslI CCNNNNNNNGG 3 cut(s) 70, 464, 1562
BsmAI GTCTC 3 cut(s) 426, 551, 1682
BsnI GGCC 4 cut(s) 193, 428, 1156, 1571
Bso31I GGTCTC 2 cut(s) 426, 551
BsoBI CYCGRG 2 cut(s) 423, 1157
Bsp120I GGGCCC 1 cut(s) 1154
Bsp1286I GDGCHC 3 cut(s) 208, 1065, 1158
Bsp1407I TGTACA 1 cut(s) 433
Bsp143I GATC 9 cut(s) 198, 739, 807, 1142, 1339, 1469, 1501, 1525, 1627
Bsp19I CCATGG 1 cut(s) 299
BspACI CCGC 3 cut(s) 573, 737, 1280
BspANI GGCC 4 cut(s) 193, 428, 1156, 1571
BspCNI CTCAG 4 cut(s) 82, 307, 1430, 1562
BspLI GGNNCC 5 cut(s) 192, 469, 1156, 1348, 1402
BspMAI CTGCAG 2 cut(s) 1060, 1306
BspOI GCTAGC 1 cut(s) 930
BspPI GGATC 5 cut(s) 193, 747, 1477, 1496, 1520
BspT107I GGYRCC 1 cut(s) 1346
BspTNI GGTCTC 2 cut(s) 426, 551
BsrDI GCAATG 2 cut(s) 545, 732
BsrFI RCCGGY 1 cut(s) 193
BsrGI TGTACA 1 cut(s) 433
BsrI ACTGG 6 cut(s) 275, 471, 795, 879, 1433, 1759
BssAI RCCGGY 1 cut(s) 193
BssECI CCNNGG 5 cut(s) 188, 299, 814, 1158, 1350
BssMI GATC 9 cut(s) 198, 739, 807, 1142, 1339, 1469, 1501, 1525, 1627
BssSI CACGAG 1 cut(s) 755
BssT1I CCWWGG 2 cut(s) 299, 1350
Bst2BI CACGAG 1 cut(s) 755
Bst2UI CCWGG 5 cut(s) 345, 523, 618, 816, 1599
Bst4CI ACNGT 8 cut(s) 172, 182, 223, 433, 1111, 1381, 1657, 1773
BstAUI TGTACA 1 cut(s) 433
BstC8I GCNNGC 5 cut(s) 405, 459, 928, 1021, 1227
BstDEI CTNAG 6 cut(s) 37, 69, 315, 1417, 1549, 1557
BstDSI CCRYGG 1 cut(s) 299
BstF5I GGATG 7 cut(s) 377, 518, 559, 772, 835, 1429, 1567
BstH2I RGCGCY 1 cut(s) 933
BstHHI GCGC 2 cut(s) 932, 1701
BstKTI GATC 9 cut(s) 201, 742, 810, 1145, 1342, 1472, 1504, 1528, 1630
BstMAI GTCTC 3 cut(s) 426, 551, 1682
BstMBI GATC 9 cut(s) 198, 739, 807, 1142, 1339, 1469, 1501, 1525, 1627
BstMWI GCNNNNNNNGC 1 cut(s) 1208
BstNI CCWGG 5 cut(s) 345, 523, 618, 816, 1599
BstNSI RCATGY 4 cut(s) 407, 724, 874, 1126
BstSCI CCNGG 7 cut(s) 187, 343, 521, 616, 814, 994, 1597
BstSFI CTRYAG 4 cut(s) 786, 1056, 1234, 1302
BstSLI GKGCMC 1 cut(s) 1158
BstV1I GCAGC 2 cut(s) 298, 854
BstX2I RGATCY 1 cut(s) 1469
BstXI CCANNNNNNTGG 2 cut(s) 1411, 1605
BstYI RGATCY 1 cut(s) 1469
Bsu36I CCTNAGG 1 cut(s) 1557
BsuRI GGCC 4 cut(s) 193, 428, 1156, 1571
BtgI CCRYGG 1 cut(s) 299
BtgZI GCGATG 1 cut(s) 954
BtsCI GGATG 7 cut(s) 377, 518, 559, 772, 835, 1429, 1567
BtsI GCAGTG 2 cut(s) 1299, 1615
BtsIMutI CAGTG 6 cut(s) 268, 429, 1079, 1252, 1299, 1615
Cac8I GCNNGC 5 cut(s) 405, 459, 928, 1021, 1227
CfoI GCGC 2 cut(s) 932, 1701
Cfr10I RCCGGY 1 cut(s) 193
Cfr13I GGNCC 6 cut(s) 191, 311, 426, 1154, 1155, 1569
CseI GACGC 1 cut(s) 1268
Csp6I GTAC 3 cut(s) 390, 434, 1347
CviQI GTAC 3 cut(s) 390, 434, 1347
DdeI CTNAG 6 cut(s) 37, 69, 315, 1417, 1549, 1557
DpnI GATC 9 cut(s) 200, 741, 809, 1144, 1341, 1471, 1503, 1527, 1629
DpnII GATC 9 cut(s) 198, 739, 807, 1142, 1339, 1469, 1501, 1525, 1627
DraI TTTAAA 1 cut(s) 1747
EciI GGCGGA 1 cut(s) 588
Ecl136II GAGCTC 1 cut(s) 206
Eco130I CCWWGG 2 cut(s) 299, 1350
Eco24I GRGCYC 2 cut(s) 208, 1158
Eco31I GGTCTC 2 cut(s) 426, 551
Eco47I GGWCC 1 cut(s) 311
Eco53kI GAGCTC 1 cut(s) 206
Eco57I CTGAAG 1 cut(s) 1554
Eco81I CCTNAGG 1 cut(s) 1557
Eco88I CYCGRG 2 cut(s) 423, 1157
EcoICRI GAGCTC 1 cut(s) 206
EcoRII CCWGG 5 cut(s) 343, 521, 616, 814, 1597
EcoT14I CCWWGG 2 cut(s) 299, 1350
EcoT38I GRGCYC 2 cut(s) 208, 1158
ErhI CCWWGG 2 cut(s) 299, 1350
FauNDI CATATG 1 cut(s) 1635
FbaI TGATCA 1 cut(s) 807
FblI GTMKAC 1 cut(s) 50
Fnu4HI GCNGC 2 cut(s) 287, 843
FokI GGATG 7 cut(s) 364, 505, 566, 779, 842, 1416, 1574
FriOI GRGCYC 2 cut(s) 208, 1158
Fsp4HI GCNGC 2 cut(s) 287, 843
FspBI CTAG 2 cut(s) 291, 927
GlaI GCGC 2 cut(s) 931, 1700
GluI GCNGC 2 cut(s) 287, 843
GsaI CCCAGC 1 cut(s) 1155
HaeII RGCGCY 1 cut(s) 933
HaeIII GGCC 4 cut(s) 193, 428, 1156, 1571
HapII CCGG 3 cut(s) 188, 194, 996
HgaI GACGC 1 cut(s) 1268
HhaI GCGC 2 cut(s) 932, 1701
Hin6I GCGC 2 cut(s) 930, 1699
HinP1I GCGC 2 cut(s) 930, 1699
HinfI GANTC 6 cut(s) 566, 593, 1415, 1426, 1449, 1581
HpaII CCGG 3 cut(s) 188, 194, 996
HphI GGTGA 4 cut(s) 208, 802, 1081, 1366
Hpy166II GTNNAC 3 cut(s) 51, 175, 238
Hpy188I TCNGA 4 cut(s) 203, 382, 592, 692
Hpy188III TCNNGA 1 cut(s) 1042
Hpy8I GTNNAC 3 cut(s) 51, 175, 238
Hpy99I CGWCG 1 cut(s) 1262
HpyAV CCTTC 3 cut(s) 380, 975, 1555
HpyCH4III ACNGT 8 cut(s) 172, 182, 223, 433, 1111, 1381, 1657, 1773
HpyCH4IV ACGT 3 cut(s) 99, 584, 1074
HpyF10VI GCNNNNNNNGC 1 cut(s) 1208
HpyF3I CTNAG 6 cut(s) 37, 69, 315, 1417, 1549, 1557
HpySE526I ACGT 3 cut(s) 99, 584, 1074
HspAI GCGC 2 cut(s) 930, 1699
KpnI GGTACC 1 cut(s) 1350
Ksp22I TGATCA 1 cut(s) 807
Kzo9I GATC 9 cut(s) 198, 739, 807, 1142, 1339, 1469, 1501, 1525, 1627
LmnI GCTCC 3 cut(s) 63, 440, 641
Lsp1109I GCAGC 2 cut(s) 298, 854
LweI GCATC 3 cut(s) 527, 1061, 1350
MaeI CTAG 2 cut(s) 291, 927
MaeII ACGT 3 cut(s) 99, 584, 1074
MaeIII GTNAC 5 cut(s) 259, 797, 1087, 1105, 1495
MalI GATC 9 cut(s) 200, 741, 809, 1144, 1341, 1471, 1503, 1527, 1629
MboI GATC 9 cut(s) 198, 739, 807, 1142, 1339, 1469, 1501, 1525, 1627
MflI RGATCY 1 cut(s) 1469
MhlI GDGCHC 3 cut(s) 208, 1065, 1158
MluCI AATT 7 cut(s) 352, 700, 1037, 1324, 1483, 1735, 1764
MlyI GAGTC 1 cut(s) 1409
MmeI TCCRAC 1 cut(s) 1007
MnlI CCTC 6 cut(s) 71, 572, 892, 972, 1153, 1670
MroXI GAANNNNTTC 1 cut(s) 1037
MseI TTAA 4 cut(s) 1508, 1539, 1668, 1746
MslI CAYNNNNRTG 7 cut(s) 108, 273, 719, 755, 1097, 1121, 1443
MspI CCGG 3 cut(s) 188, 194, 996
MspR9I CCNGG 7 cut(s) 189, 345, 523, 618, 816, 996, 1599
MvaI CCWGG 5 cut(s) 345, 523, 618, 816, 1599
MwoI GCNNNNNNNGC 1 cut(s) 1208
NciI CCSGG 2 cut(s) 189, 996
NcoI CCATGG 1 cut(s) 299
NdeI CATATG 1 cut(s) 1635
NdeII GATC 9 cut(s) 198, 739, 807, 1142, 1339, 1469, 1501, 1525, 1627
NheI GCTAGC 1 cut(s) 926
NlaIV GGNNCC 5 cut(s) 192, 469, 1156, 1348, 1402
NmuCI GTSAC 2 cut(s) 259, 1087
NspI RCATGY 4 cut(s) 407, 724, 874, 1126
PaeI GCATGC 1 cut(s) 407
PciI ACATGT 2 cut(s) 720, 870
PdmI GAANNNNTTC 1 cut(s) 1037
PfeI GAWTC 5 cut(s) 566, 593, 1426, 1449, 1581
PflMI CCANNNNNTGG 1 cut(s) 464
PfoI TCCNGGA 1 cut(s) 1597
PkrI GCNGC 2 cut(s) 288, 844
PleI GAGTC 1 cut(s) 1409
PpsI GAGTC 1 cut(s) 1409
PscI ACATGT 2 cut(s) 720, 870
PsiI TTATAA 1 cut(s) 1371
Psp124BI GAGCTC 1 cut(s) 208
Psp1406I AACGTT 1 cut(s) 99
Psp6I CCWGG 5 cut(s) 343, 521, 616, 814, 1597
PspFI CCCAGC 1 cut(s) 1151
PspGI CCWGG 5 cut(s) 343, 521, 616, 814, 1597
PspN4I GGNNCC 5 cut(s) 192, 469, 1156, 1348, 1402
PspOMI GGGCCC 1 cut(s) 1154
PspPI GGNCC 6 cut(s) 191, 311, 426, 1154, 1155, 1569
PsrI GAACNNNNNNTAC 2 cut(s) 754, 786
PstI CTGCAG 2 cut(s) 1060, 1306
PsuI RGATCY 1 cut(s) 1469
RsaI GTAC 3 cut(s) 391, 435, 1348
RsaNI GTAC 3 cut(s) 390, 434, 1347
RseI CAYNNNNRTG 7 cut(s) 108, 273, 719, 755, 1097, 1121, 1443
SacI GAGCTC 1 cut(s) 208
SaqAI TTAA 4 cut(s) 1508, 1539, 1668, 1746
SatI GCNGC 2 cut(s) 287, 843
Sau3AI GATC 9 cut(s) 198, 739, 807, 1142, 1339, 1469, 1501, 1525, 1627
Sau96I GGNCC 6 cut(s) 191, 311, 426, 1154, 1155, 1569
SchI GAGTC 1 cut(s) 1409
ScrFI CCNGG 7 cut(s) 189, 345, 523, 618, 816, 996, 1599
SduI GDGCHC 3 cut(s) 208, 1065, 1158
SfaNI GCATC 3 cut(s) 527, 1061, 1350
SfcI CTRYAG 4 cut(s) 786, 1056, 1234, 1302
SinI GGWCC 1 cut(s) 311
SmiMI CAYNNNNRTG 7 cut(s) 108, 273, 719, 755, 1097, 1121, 1443
SmlI CTYRAG 2 cut(s) 90, 122
SmoI CTYRAG 2 cut(s) 90, 122
SphI GCATGC 1 cut(s) 407
Sse9I AATT 7 cut(s) 352, 700, 1037, 1324, 1483, 1735, 1764
SsiI CCGC 3 cut(s) 573, 737, 1280
SspMI CTAG 2 cut(s) 291, 927
SstI GAGCTC 1 cut(s) 208
StyD4I CCNGG 7 cut(s) 187, 343, 521, 616, 814, 994, 1597
StyI CCWWGG 2 cut(s) 299, 1350
TaaI ACNGT 8 cut(s) 172, 182, 223, 433, 1111, 1381, 1657, 1773
TaiI ACGT 3 cut(s) 102, 587, 1077
TaqI TCGA 7 cut(s) 306, 564, 655, 1067, 1383, 1488, 1630
TasI AATT 7 cut(s) 352, 700, 1037, 1324, 1483, 1735, 1764
TatI WGTACW 1 cut(s) 433
TfiI GAWTC 5 cut(s) 566, 593, 1426, 1449, 1581
Tru1I TTAA 4 cut(s) 1508, 1539, 1668, 1746
Tru9I TTAA 4 cut(s) 1508, 1539, 1668, 1746
TscAI CASTG 6 cut(s) 275, 436, 1086, 1252, 1306, 1622
TseFI GTSAC 2 cut(s) 259, 1087
TseI GCWGC 2 cut(s) 286, 842
Tsp45I GTSAC 2 cut(s) 259, 1087
TspDTI ATGAA 9 cut(s) 92, 366, 510, 957, 1328, 1427, 1573, 1600, 1651
TspRI CASTG 6 cut(s) 275, 436, 1086, 1252, 1306, 1622
Van91I CCANNNNNTGG 1 cut(s) 464
VpaK11BI GGWCC 1 cut(s) 311
XapI RAATTY 3 cut(s) 352, 1483, 1735
XceI RCATGY 4 cut(s) 407, 724, 874, 1126
XmiI GTMKAC 1 cut(s) 50
XmnI GAANNNNTTC 1 cut(s) 1037
XspI CTAG 2 cut(s) 291, 927
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.