No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g02421 |
| rosa_chinensis | RchiOBHm_Chr4g0404691 |
| rosa_laevigata | RLG00000008909 RLG00000008915 |
| rosa_roxburghii | Rroxscaffold_5G00348890 |
| rosa_samantha | Rh4AG124400 Rh4BG118700 Rh4CG132700 Rh4DG117800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 12 |
| AcsI | RAATTY | 1 cut(s) | 71 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 23, 24 |
| AgsI | TTSAA | 1 cut(s) | 114 |
| AluBI | AGCT | 1 cut(s) | 253 |
| AluI | AGCT | 1 cut(s) | 253 |
| Alw21I | GWGCWC | 1 cut(s) | 232 |
| AlwI | GGATC | 1 cut(s) | 12 |
| Ama87I | CYCGRG | 1 cut(s) | 17 |
| ApeKI | GCWGC | 1 cut(s) | 250 |
| ApoI | RAATTY | 1 cut(s) | 71 |
| AspLEI | GCGC | 1 cut(s) | 170 |
| AspS9I | GGNCC | 1 cut(s) | 182 |
| AsuII | TTCGAA | 1 cut(s) | 75 |
| AvaI | CYCGRG | 1 cut(s) | 17 |
| AvaII | GGWCC | 1 cut(s) | 182 |
| AxyI | CCTNAGG | 1 cut(s) | 186 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 45, 78 |
| Bbv12I | GWGCWC | 1 cut(s) | 232 |
| BbvI | GCAGC | 1 cut(s) | 262 |
| BfoI | RGCGCY | 1 cut(s) | 171 |
| BisI | GCNGC | 1 cut(s) | 251 |
| BlpI | GCTNAGC | 2 cut(s) | 41, 231 |
| BlsI | GCNGC | 1 cut(s) | 252 |
| Bme18I | GGWCC | 1 cut(s) | 182 |
| BmeT110I | CYCGRG | 1 cut(s) | 17 |
| BmgT120I | GGNCC | 1 cut(s) | 182 |
| BmsI | GCATC | 1 cut(s) | 244 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 41, 231 |
| Bpu14I | TTCGAA | 1 cut(s) | 75 |
| BpuEI | CTTGAG | 2 cut(s) | 228, 239 |
| BsaJI | CCNNGG | 1 cut(s) | 18 |
| BsaXI | ACNNNNNCTCC | 3 cut(s) | 206, 236, 251 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 23, 24 |
| Bse21I | CCTNAGG | 1 cut(s) | 186 |
| BseDI | CCNNGG | 1 cut(s) | 18 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 23, 24 |
| BseMII | CTCAG | 2 cut(s) | 32, 245 |
| BseXI | GCAGC | 1 cut(s) | 262 |
| BsgI | GTGCAG | 1 cut(s) | 269 |
| BsiHKAI | GWGCWC | 1 cut(s) | 232 |
| BsiHKCI | CYCGRG | 1 cut(s) | 17 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 23, 24 |
| BsmI | GAATGC | 1 cut(s) | 160 |
| BsoBI | CYCGRG | 1 cut(s) | 17 |
| Bsp119I | TTCGAA | 1 cut(s) | 75 |
| Bsp1286I | GDGCHC | 1 cut(s) | 232 |
| Bsp143I | GATC | 2 cut(s) | 4, 94 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 41, 231 |
| BspCNI | CTCAG | 2 cut(s) | 33, 244 |
| BspPI | GGATC | 1 cut(s) | 12 |
| BspT104I | TTCGAA | 1 cut(s) | 75 |
| BssECI | CCNNGG | 1 cut(s) | 18 |
| BssMI | GATC | 2 cut(s) | 4, 94 |
| Bst6I | CTCTTC | 1 cut(s) | 138 |
| BstBI | TTCGAA | 1 cut(s) | 75 |
| BstC8I | GCNNGC | 2 cut(s) | 90, 158 |
| BstDEI | CTNAG | 3 cut(s) | 41, 186, 231 |
| BstH2I | RGCGCY | 1 cut(s) | 171 |
| BstHHI | GCGC | 1 cut(s) | 170 |
| BstKTI | GATC | 2 cut(s) | 7, 97 |
| BstMBI | GATC | 2 cut(s) | 4, 94 |
| BstV1I | GCAGC | 1 cut(s) | 262 |
| Bsu36I | CCTNAGG | 1 cut(s) | 186 |
| Cac8I | GCNNGC | 2 cut(s) | 90, 158 |
| CfoI | GCGC | 1 cut(s) | 170 |
| Cfr13I | GGNCC | 1 cut(s) | 182 |
| CviJI | RGCY | 2 cut(s) | 16, 253 |
| CviKI_1 | RGCY | 2 cut(s) | 16, 253 |
| DdeI | CTNAG | 3 cut(s) | 41, 186, 231 |
| DpnI | GATC | 2 cut(s) | 6, 96 |
| DpnII | GATC | 2 cut(s) | 4, 94 |
| Eam1104I | CTCTTC | 1 cut(s) | 138 |
| EarI | CTCTTC | 1 cut(s) | 138 |
| Eco47I | GGWCC | 1 cut(s) | 182 |
| Eco81I | CCTNAGG | 1 cut(s) | 186 |
| Eco88I | CYCGRG | 1 cut(s) | 17 |
| EcoRI | GAATTC | 1 cut(s) | 71 |
| FaiI | YATR | 1 cut(s) | 225 |
| Fnu4HI | GCNGC | 1 cut(s) | 251 |
| Fsp4HI | GCNGC | 1 cut(s) | 251 |
| GlaI | GCGC | 1 cut(s) | 169 |
| GluI | GCNGC | 1 cut(s) | 251 |
| HaeII | RGCGCY | 1 cut(s) | 171 |
| HhaI | GCGC | 1 cut(s) | 170 |
| Hin6I | GCGC | 1 cut(s) | 168 |
| HinP1I | GCGC | 1 cut(s) | 168 |
| HincII | GTYRAC | 1 cut(s) | 208 |
| HindII | GTYRAC | 1 cut(s) | 208 |
| HinfI | GANTC | 2 cut(s) | 241, 260 |
| Hpy166II | GTNNAC | 1 cut(s) | 208 |
| Hpy188I | TCNGA | 2 cut(s) | 9, 240 |
| Hpy8I | GTNNAC | 1 cut(s) | 208 |
| HpyCH4V | TGCA | 2 cut(s) | 88, 250 |
| HpyF3I | CTNAG | 3 cut(s) | 41, 186, 231 |
| HspAI | GCGC | 1 cut(s) | 168 |
| Kzo9I | GATC | 2 cut(s) | 4, 94 |
| LmnI | GCTCC | 1 cut(s) | 214 |
| LpnPI | CCDG | 1 cut(s) | 150 |
| Lsp1109I | GCAGC | 1 cut(s) | 262 |
| LweI | GCATC | 1 cut(s) | 244 |
| MaeIII | GTNAC | 1 cut(s) | 131 |
| MalI | GATC | 2 cut(s) | 6, 96 |
| MboI | GATC | 2 cut(s) | 4, 94 |
| MboII | GAAGA | 2 cut(s) | 155, 203 |
| MhlI | GDGCHC | 1 cut(s) | 232 |
| MluCI | AATT | 2 cut(s) | 71, 118 |
| MlyI | GAGTC | 2 cut(s) | 235, 269 |
| MnlI | CCTC | 2 cut(s) | 13, 146 |
| Mva1269I | GAATGC | 1 cut(s) | 160 |
| NdeII | GATC | 2 cut(s) | 4, 94 |
| NspV | TTCGAA | 1 cut(s) | 75 |
| PctI | GAATGC | 1 cut(s) | 160 |
| PkrI | GCNGC | 1 cut(s) | 252 |
| PleI | GAGTC | 2 cut(s) | 235, 268 |
| PpsI | GAGTC | 2 cut(s) | 235, 268 |
| PspPI | GGNCC | 1 cut(s) | 182 |
| SatI | GCNGC | 1 cut(s) | 251 |
| Sau3AI | GATC | 2 cut(s) | 4, 94 |
| Sau96I | GGNCC | 1 cut(s) | 182 |
| SchI | GAGTC | 2 cut(s) | 235, 269 |
| SduI | GDGCHC | 1 cut(s) | 232 |
| SetI | ASST | 2 cut(s) | 24, 255 |
| SfaNI | GCATC | 1 cut(s) | 244 |
| SfuI | TTCGAA | 1 cut(s) | 75 |
| SinI | GGWCC | 1 cut(s) | 182 |
| SmlI | CTYRAG | 2 cut(s) | 243, 254 |
| SmoI | CTYRAG | 2 cut(s) | 243, 254 |
| Sse9I | AATT | 2 cut(s) | 71, 118 |
| TaqI | TCGA | 1 cut(s) | 75 |
| TaqII | GACCGA | 1 cut(s) | 170 |
| TasI | AATT | 2 cut(s) | 71, 118 |
| TseI | GCWGC | 1 cut(s) | 250 |
| VpaK11BI | GGWCC | 1 cut(s) | 182 |
| XapI | RAATTY | 1 cut(s) | 71 |