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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g02421 |
| rosa_chinensis | RchiOBHm_Chr4g0404691 |
| rosa_laevigata | RLG00000008909 RLG00000008915 |
| rosa_roxburghii | Rroxscaffold_5G00348890 |
| rosa_samantha | Rh4AG124400 Rh4BG118700 Rh4CG132700 Rh4DG117800 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 68 |
| AflII | CTTAAG | 1 cut(s) | 101 |
| AgsI | TTSAA | 1 cut(s) | 166 |
| AluBI | AGCT | 1 cut(s) | 169 |
| AluI | AGCT | 1 cut(s) | 169 |
| AspLEI | GCGC | 2 cut(s) | 86, 146 |
| BfoI | RGCGCY | 2 cut(s) | 87, 147 |
| BfrI | CTTAAG | 1 cut(s) | 101 |
| BlpI | GCTNAGC | 1 cut(s) | 147 |
| BmsI | GCATC | 1 cut(s) | 160 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 147 |
| BpuEI | CTTGAG | 1 cut(s) | 155 |
| BsaXI | ACNNNNNCTCC | 3 cut(s) | 122, 152, 167 |
| Bse1I | ACTGG | 1 cut(s) | 85 |
| BseGI | GGATG | 1 cut(s) | 29 |
| BseMII | CTCAG | 1 cut(s) | 161 |
| BseNI | ACTGG | 1 cut(s) | 85 |
| Bsp143I | GATC | 1 cut(s) | 10 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 147 |
| BspACI | CCGC | 1 cut(s) | 68 |
| BspCNI | CTCAG | 1 cut(s) | 160 |
| BspTI | CTTAAG | 1 cut(s) | 101 |
| BsrI | ACTGG | 1 cut(s) | 85 |
| BssMI | GATC | 1 cut(s) | 10 |
| BstAFI | CTTAAG | 1 cut(s) | 101 |
| BstC8I | GCNNGC | 1 cut(s) | 6 |
| BstDEI | CTNAG | 1 cut(s) | 147 |
| BstF5I | GGATG | 1 cut(s) | 29 |
| BstH2I | RGCGCY | 2 cut(s) | 87, 147 |
| BstHHI | GCGC | 2 cut(s) | 86, 146 |
| BstKTI | GATC | 1 cut(s) | 13 |
| BstMBI | GATC | 1 cut(s) | 10 |
| BtsCI | GGATG | 1 cut(s) | 29 |
| BtsIMutI | CAGTG | 1 cut(s) | 78 |
| Cac8I | GCNNGC | 1 cut(s) | 6 |
| CfoI | GCGC | 2 cut(s) | 86, 146 |
| CviAII | CATG | 1 cut(s) | 17 |
| CviJI | RGCY | 1 cut(s) | 169 |
| CviKI_1 | RGCY | 1 cut(s) | 169 |
| DdeI | CTNAG | 1 cut(s) | 147 |
| DpnI | GATC | 1 cut(s) | 12 |
| DpnII | GATC | 1 cut(s) | 10 |
| FaeI | CATG | 1 cut(s) | 20 |
| FaiI | YATR | 2 cut(s) | 18, 141 |
| FatI | CATG | 1 cut(s) | 16 |
| FokI | GGATG | 1 cut(s) | 36 |
| GlaI | GCGC | 2 cut(s) | 85, 145 |
| HaeII | RGCGCY | 2 cut(s) | 87, 147 |
| HhaI | GCGC | 2 cut(s) | 86, 146 |
| Hin1II | CATG | 1 cut(s) | 20 |
| Hin6I | GCGC | 2 cut(s) | 84, 144 |
| HinP1I | GCGC | 2 cut(s) | 84, 144 |
| HincII | GTYRAC | 1 cut(s) | 124 |
| HindII | GTYRAC | 1 cut(s) | 124 |
| HinfI | GANTC | 2 cut(s) | 157, 176 |
| Hpy166II | GTNNAC | 1 cut(s) | 124 |
| Hpy188I | TCNGA | 1 cut(s) | 156 |
| Hpy8I | GTNNAC | 1 cut(s) | 124 |
| HpyF3I | CTNAG | 1 cut(s) | 147 |
| Hsp92II | CATG | 1 cut(s) | 20 |
| HspAI | GCGC | 2 cut(s) | 84, 144 |
| Kzo9I | GATC | 1 cut(s) | 10 |
| LmnI | GCTCC | 1 cut(s) | 130 |
| LpnPI | CCDG | 2 cut(s) | 42, 66 |
| LweI | GCATC | 1 cut(s) | 160 |
| MaeIII | GTNAC | 1 cut(s) | 47 |
| MalI | GATC | 1 cut(s) | 12 |
| MboI | GATC | 1 cut(s) | 10 |
| MboII | GAAGA | 1 cut(s) | 119 |
| MfeI | CAATTG | 1 cut(s) | 161 |
| MluCI | AATT | 2 cut(s) | 34, 161 |
| MlyI | GAGTC | 2 cut(s) | 151, 185 |
| MnlI | CCTC | 1 cut(s) | 100 |
| MseI | TTAA | 1 cut(s) | 102 |
| MspCI | CTTAAG | 1 cut(s) | 101 |
| MunI | CAATTG | 1 cut(s) | 161 |
| NdeII | GATC | 1 cut(s) | 10 |
| NlaIII | CATG | 1 cut(s) | 20 |
| PleI | GAGTC | 2 cut(s) | 151, 184 |
| PpsI | GAGTC | 2 cut(s) | 151, 184 |
| SaqAI | TTAA | 1 cut(s) | 102 |
| Sau3AI | GATC | 1 cut(s) | 10 |
| SchI | GAGTC | 2 cut(s) | 151, 185 |
| SetI | ASST | 1 cut(s) | 171 |
| SfaNI | GCATC | 1 cut(s) | 160 |
| SgeI | CNNG | 7 cut(s) | 17, 29, 64, 69, 93, 139, 146 |
| SmlI | CTYRAG | 2 cut(s) | 101, 170 |
| SmoI | CTYRAG | 2 cut(s) | 101, 170 |
| Sse9I | AATT | 2 cut(s) | 34, 161 |
| SsiI | CCGC | 1 cut(s) | 68 |
| TaqI | TCGA | 1 cut(s) | 29 |
| TasI | AATT | 2 cut(s) | 34, 161 |
| Tru1I | TTAA | 1 cut(s) | 102 |
| Tru9I | TTAA | 1 cut(s) | 102 |
| TscAI | CASTG | 1 cut(s) | 85 |
| TspRI | CASTG | 1 cut(s) | 85 |
| Vha464I | CTTAAG | 1 cut(s) | 101 |