FvH4_3g15480

Potassium transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0014692
Physical Location & Seq
Reverse (-)
9672252 .. 9678211
5960 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g15480.t2

Sequence Viewer

Length: 2217 bp
ATGGCAAGGCAAATGGACCCAGAATCTGCTTCTGCTTCCGGCGGTTCACGCATGAATTTCTATGCGGCCACTCTCTGCCTTGCTTATCAGAGTCTTGGTATTGTTTATGGGGATCTTAGTATATCACCAATATATGCCTACAAAAGTACATTCTCGGGTGGTTTGCAGCTTTATGAGGAGGATATTGAGATTCTTGGGGTACTTTCCATGGTTTTGTGGACTTTGACTCTCATTCCTCTCTGCAAATACATGATATTTGTGTTAGCAGCAGATGACCATGGCGAAGGTGGATCGTTTGCTTTGTATTCATTACTCTGCCGGCATTCAAGGATGGGCTTTTTGAACACCATCAATCCTTCTCAAGAGCATATATCTTCTTGCAGATCTGAAATGTCCAAGGATACCAGAACGAGCTTACTCATAAAACAGTTTTTTGAGAAGCACAAGAATTCTCGAGTAGTATTGGTGCTTGTAGTTTTCTTAGGGACCGGCATGATAATTGGTGATGGTATCCTCACTCCAACCATGTCTGTTCTTTCTGCAGTCTATGGAATTAAAGTCAAAGTCCCAGAGTTACATGAGAATTATACTGTGCTCATAGCTTGCATCATCTTGGTTAGCCTCTTTGCTGTTCAGCATTATGGGACACACAGAGTTGGGTTTCTTTTTGCTCCAATCATGACAGCATGGTTGCTATGCATCAGTGGGGTGGGCATTTACAATATATTTCGTTGGAACCCTGGTGTTATATGTGCTCTGTCACCACACTATATTTATAAGTTCTTTAAAAAAACTGGAAGAGTTGGGTTTAGTTCGCTTGGAGGCATTGTTCTTTGTCTCACAGGTACAGAAGCAATGTTTGCTGATCTTGGCCATTTTTCCAAACTGTCTATTAGGGTTGCATTTACAGGCTTTATTTATCCTTGCTTAGTTCTGGCATACATGGGAGAGGCTGCTTTTCTCTCCAAGCACAAAATGGATCTCCACAGAAGCTTTTACATGGCCATCCCTGAGGTCATTTTTTGGCCGGTATTCATTATTGCTACTCTTGCTTCTGTGGTGGCAAGTCAAGCAATAATTTCAGCTACCTTCTCAATAGTCAGTCAGTGTAGGGGACTGCGATGCTTCCCTCGTGTGAAGATAAAACATACATCAAATCAGATATTTGGGCAGATATACATTCCCGAGGTGAACTGGATTTTGATGGTATTGTGTCTGGCTGTCATCATTGGATTTCGAGACACTGATATGATAGGCAATGCATATGGGCTTGCTGCAGTGTCAGTAATGTTCATCACGACCTGCTTGATGTTTTTGATTATTAGTACTGTTTGGAAGCAAAACATCCTTGTGGCATCCCTGTTCGTCATCATCTTTGGATCTCTCGAGCTACTCTATATCTCTGCATGCCTCAGTAAAGTACATAAAGGAGGCTGGGTTCCCCTTTGTTCCGCTTTTATAATCATGTCTTTGATGTCTATATGGAATTATGGGACTGTAAAGAAAGATGCATTTGAGCTGGAGAACAAGGTGCCCTTGGATAGGCTTCTGAGCTCTGGGCCAAGCATAGGTATTGCAAGAGTACCTGGAATCTGCCTAGTCTATTCTAACATTCCCTCTGGTCTCCCTCCAATGTTTGCACATTTCGTCACGAACTTCCCAACATTTCATCAAACTCTCATATTTGTGACCCTTCAGTCTTTCATGGTTCCAAAAGTTCCAGTGAATGAGCGTTTTGTTGTTAGCCGGGTTGGCCTGCCAGAAATGCTTATCTTTCGGTGTTTAGTGAGGTATGGATACAAGGATGCAAGAGATTGCTACAAATTTGAAATCCAACTGATTGAAGAGGTGGCAGAGTTCCTGAAACAGGAGGCTCATAGCAAAGAGATGGCAGTCAGAGAGCCATCACCGAACCATATGTTTGGTGCTCTGGGAGACGACGAGGTTAGTATTGCCAGTTCTGAGCAGTGGAGAAACGAGATTAAGGTTGGCAGTGTCGAGTGTCAAGAGGTGACCAAGCTCAAGGAGTGTAGGGAAGCTGGTGTGGCTTACATGATTGGAAATAATTATATTGTGGCGCGTCCCATATCGCCTTTCCTGAAGAAGTTTGCAATCTCTGTCTACAATTTTCTGAGACGGAACTGCAGGCGTCCAGCAAACGCCCTTGGGATTCCTCATCCCACACTGCTCGAAGTGGGAATGCTCTATCGGGTGTAA

Protein Analysis

739

Amino Acids

82.33

Weight (kDa)

8.81

Isoelectric Point (pI)

44.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
K_trans PF02705 11 - 502 6.9e-164 K+ potassium transporter integral membrane domain
K_trans_C PF22776 513 - 720 7e-25 K+ potassium transporter C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014692)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g15480 FvH4_3g15480
malus_domestica MD05G1223100.v1.1 MD10G1204500.v1.1
prunus_persica Prupe.4G137300_v2.0.a1
pyrus_communis pycom05g20550 pycom10g17520
rosa_chinensis RchiOBHm_Chr5g0025981
rosa_laevigata RLG00000032888
rosa_multiflora Rmu_sc0003020.1_g000014
rosa_roxburghii Rroxscaffold_1G00053270
rosa_rugosa Rorug05G0090100
rosa_samantha Rh5AG181800 Rh5BG179900 Rh5CG198400 Rh5DG180900
rosa_wichuraiana Rw5G016540

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 777, 1460
AasI GACNNNNNNGTC 1 cut(s) 1696
Acc36I ACCTGC 1 cut(s) 1310
AccB1I GGYRCC 1 cut(s) 1531
AccI GTMKAC 1 cut(s) 2121
AccII CGCG 1 cut(s) 2080
AciI CCGC 3 cut(s) 42, 65, 1452
AclWI GGATC 4 cut(s) 120, 298, 987, 1387
AcoI YGGCCR 4 cut(s) 66, 871, 1002, 1025
AcsI RAATTY 3 cut(s) 55, 448, 1823
AcuI CTGAAG 2 cut(s) 1679, 2120
AcyI GRCGYC 1 cut(s) 2149
AfaI GTAC 6 cut(s) 148, 201, 847, 1327, 1422, 1584
AfiI CCNNNNNNNGG 3 cut(s) 1542, 1568, 1867
AgsI TTSAA 4 cut(s) 327, 343, 1829, 1844
AjnI CCWGG 2 cut(s) 739, 1585
AloI GAACNNNNNNTCC 4 cut(s) 813, 845, 1422, 1454
Alw21I GWGCWC 4 cut(s) 597, 757, 1556, 1930
Alw26I GTCTC 5 cut(s) 842, 1233, 1628, 1929, 2128
AlwI GGATC 4 cut(s) 120, 298, 987, 1387
AlwNI CAGNNNCTG 1 cut(s) 26
Ama87I CYCGRG 4 cut(s) 154, 453, 1184, 1385
AoxI GGCC 6 cut(s) 66, 871, 1002, 1025, 1559, 1753
ApeKI GCWGC 4 cut(s) 166, 266, 953, 1274
ApoI RAATTY 3 cut(s) 55, 448, 1823
AspLEI GCGC 1 cut(s) 2080
AspS9I GGNCC 3 cut(s) 16, 486, 1559
AsuC2I CCSGG 1 cut(s) 1748
AsuHPI GGTGA 6 cut(s) 117, 515, 753, 1201, 1899, 2023
AvaI CYCGRG 4 cut(s) 154, 453, 1184, 1385
AvaII GGWCC 2 cut(s) 16, 486
AxyI CCTNAGG 1 cut(s) 1011
BaeGI GKGCMC 1 cut(s) 1536
BalI TGGCCA 2 cut(s) 873, 1004
BanI GGYRCC 1 cut(s) 1531
BanII GRGCYC 1 cut(s) 1556
BauI CACGAG 1 cut(s) 1131
Bbv12I GWGCWC 4 cut(s) 597, 757, 1556, 1930
BbvI GCAGC 4 cut(s) 178, 278, 940, 1261
BccI CCATC 7 cut(s) 325, 356, 500, 1013, 1198, 1882, 1912
BciT130I CCWGG 2 cut(s) 741, 1587
BciVI GTATCC 3 cut(s) 394, 521, 1790
BcnI CCSGG 1 cut(s) 1748
BcoDI GTCTC 5 cut(s) 842, 1233, 1628, 1929, 2128
BfaI CTAG 1 cut(s) 1598
BfmI CTRYAG 3 cut(s) 540, 1275, 2143
BfuAI ACCTGC 1 cut(s) 1310
BfuI GTATCC 3 cut(s) 394, 521, 1790
BglI GCCNNNNNGGC 1 cut(s) 1752
BglII AGATCT 1 cut(s) 383
BisI GCNGC 5 cut(s) 66, 167, 267, 954, 1275
BlsI GCNGC 5 cut(s) 67, 168, 268, 955, 1276
BmcAI AGTACT 1 cut(s) 1327
Bme1390I CCNGG 3 cut(s) 741, 1587, 1748
Bme18I GGWCC 2 cut(s) 16, 486
BmeT110I CYCGRG 4 cut(s) 154, 453, 1184, 1385
BmgT120I GGNCC 3 cut(s) 16, 486, 1559
BmiI GGNNCC 6 cut(s) 18, 487, 737, 1440, 1533, 1710
BmrFI CCNGG 3 cut(s) 741, 1587, 1748
BmsI GCATC 6 cut(s) 615, 708, 1112, 1364, 1498, 1795
BpmI CTGGAG 1 cut(s) 1541
BpuEI CTTGAG 2 cut(s) 345, 2006
BpuMI CCSGG 1 cut(s) 1748
BsaHI GRCGYC 1 cut(s) 2149
BsaI GGTCTC 1 cut(s) 1628
BsaJI CCNNGG 7 cut(s) 207, 277, 396, 739, 1185, 1536, 2164
BsaXI ACNNNNNCTCC 4 cut(s) 813, 843, 1422, 1452
Bsc4I CCNNNNNNNGG 3 cut(s) 1542, 1568, 1867
Bse118I RCCGGY 3 cut(s) 318, 488, 1027
Bse1I ACTGG 4 cut(s) 799, 1199, 1721, 1956
Bse21I CCTNAGG 1 cut(s) 1011
Bse3DI GCAATG 2 cut(s) 861, 1264
BseBI CCWGG 2 cut(s) 741, 1587
BseDI CCNNGG 7 cut(s) 207, 277, 396, 739, 1185, 1536, 2164
BseGI GGATG 6 cut(s) 336, 1005, 1344, 1355, 1810, 2176
BseLI CCNNNNNNNGG 3 cut(s) 1542, 1568, 1867
BseMI GCAATG 2 cut(s) 861, 1264
BseMII CTCAG 5 cut(s) 1002, 1426, 1541, 1953, 2123
BseNI ACTGG 4 cut(s) 799, 1199, 1721, 1956
BseRI GAGGAG 1 cut(s) 191
BseSI GKGCMC 1 cut(s) 1536
BseXI GCAGC 4 cut(s) 178, 278, 940, 1261
BseYI CCCAGC 1 cut(s) 1434
Bsh1236I CGCG 1 cut(s) 2080
BshFI GGCC 6 cut(s) 68, 873, 1004, 1027, 1561, 1755
BshNI GGYRCC 1 cut(s) 1531
BsiHKAI GWGCWC 4 cut(s) 597, 757, 1556, 1930
BsiHKCI CYCGRG 4 cut(s) 154, 453, 1184, 1385
BsiSI CCGG 5 cut(s) 39, 319, 489, 1028, 1747
BslFI GGGAC 6 cut(s) 499, 551, 658, 1128, 1507, 2067
BslI CCNNNNNNNGG 3 cut(s) 1542, 1568, 1867
BsmAI GTCTC 5 cut(s) 842, 1233, 1628, 1929, 2128
BsmBI CGTCTC 2 cut(s) 1929, 2128
BsmFI GGGAC 6 cut(s) 499, 551, 658, 1128, 1507, 2067
BsmI GAATGC 2 cut(s) 322, 2205
BsnI GGCC 6 cut(s) 68, 873, 1004, 1027, 1561, 1755
Bso31I GGTCTC 1 cut(s) 1628
BsoBI CYCGRG 4 cut(s) 154, 453, 1184, 1385
Bsp1286I GDGCHC 5 cut(s) 597, 757, 1536, 1556, 1930
Bsp143I GATC 6 cut(s) 112, 290, 383, 865, 979, 1379
Bsp19I CCATGG 2 cut(s) 207, 277
BspACI CCGC 3 cut(s) 42, 65, 1452
BspANI GGCC 6 cut(s) 68, 873, 1004, 1027, 1561, 1755
BspCNI CTCAG 5 cut(s) 1003, 1425, 1542, 1954, 2124
BspFNI CGCG 1 cut(s) 2080
BspHI TCATGA 1 cut(s) 678
BspLI GGNNCC 6 cut(s) 18, 487, 737, 1440, 1533, 1710
BspMAI CTGCAG 3 cut(s) 544, 1279, 2147
BspMI ACCTGC 1 cut(s) 1310
BspPI GGATC 4 cut(s) 120, 298, 987, 1387
BspT107I GGYRCC 1 cut(s) 1531
BspTNI GGTCTC 1 cut(s) 1628
BsrDI GCAATG 2 cut(s) 861, 1264
BsrFI RCCGGY 3 cut(s) 318, 488, 1027
BsrI ACTGG 4 cut(s) 799, 1199, 1721, 1956
BssAI RCCGGY 3 cut(s) 318, 488, 1027
BssECI CCNNGG 7 cut(s) 207, 277, 396, 739, 1185, 1536, 2164
BssMI GATC 6 cut(s) 112, 290, 383, 865, 979, 1379
BssNI GRCGYC 1 cut(s) 2149
BssSI CACGAG 1 cut(s) 1131
BssT1I CCWWGG 5 cut(s) 207, 277, 396, 1536, 2164
Bst2BI CACGAG 1 cut(s) 1131
Bst2UI CCWGG 2 cut(s) 741, 1587
Bst4CI ACNGT 5 cut(s) 429, 592, 888, 1330, 1498
Bst6I CTCTTC 2 cut(s) 793, 1839
BstACI GRCGYC 1 cut(s) 2149
BstAPI GCANNNNNTGC 1 cut(s) 860
BstC8I GCNNGC 6 cut(s) 320, 604, 1272, 1408, 1757, 2147
BstDEI CTNAG 8 cut(s) 116, 481, 928, 1011, 1412, 1550, 1962, 2132
BstDSI CCRYGG 2 cut(s) 207, 277
BstEII GGTNACC 1 cut(s) 2011
BstENI CCTNNNNNAGG 2 cut(s) 1540, 1865
BstF5I GGATG 6 cut(s) 336, 1005, 1344, 1355, 1810, 2176
BstFNI CGCG 1 cut(s) 2080
BstHHI GCGC 1 cut(s) 2080
BstKTI GATC 6 cut(s) 115, 293, 386, 868, 982, 1382
BstMAI GTCTC 5 cut(s) 842, 1233, 1628, 1929, 2128
BstMBI GATC 6 cut(s) 112, 290, 383, 865, 979, 1379
BstMWI GCNNNNNNNGC 7 cut(s) 48, 860, 1049, 1070, 1752, 1765, 2045
BstNI CCWGG 2 cut(s) 741, 1587
BstNSI RCATGY 1 cut(s) 1410
BstPI GGTNACC 1 cut(s) 2011
BstSCI CCNGG 3 cut(s) 739, 1585, 1746
BstSFI CTRYAG 3 cut(s) 540, 1275, 2143
BstSLI GKGCMC 1 cut(s) 1536
BstUI CGCG 1 cut(s) 2080
BstV1I GCAGC 4 cut(s) 178, 278, 940, 1261
BstX2I RGATCY 4 cut(s) 112, 383, 979, 1379
BstXI CCANNNNNNTGG 1 cut(s) 1922
BstYI RGATCY 4 cut(s) 112, 383, 979, 1379
Bsu36I CCTNAGG 1 cut(s) 1011
BsuI GTATCC 3 cut(s) 394, 521, 1790
BsuRI GGCC 6 cut(s) 68, 873, 1004, 1027, 1561, 1755
BtgI CCRYGG 2 cut(s) 207, 277
BtgZI GCGATG 1 cut(s) 1135
BtsCI GGATG 6 cut(s) 336, 1005, 1344, 1355, 1810, 2176
BtsI GCAGTG 4 cut(s) 1284, 1973, 1999, 2183
BtsIMutI CAGTG 8 cut(s) 709, 1112, 1242, 1284, 1728, 1973, 1999, 2183
BveI ACCTGC 1 cut(s) 1310
Cac8I GCNNGC 6 cut(s) 320, 604, 1272, 1408, 1757, 2147
CaiI CAGNNNCTG 1 cut(s) 26
CciI TCATGA 1 cut(s) 678
CfoI GCGC 1 cut(s) 2080
Cfr10I RCCGGY 3 cut(s) 318, 488, 1027
Cfr13I GGNCC 3 cut(s) 16, 486, 1559
CseI GACGC 2 cut(s) 2069, 2138
Csp6I GTAC 6 cut(s) 147, 200, 846, 1326, 1421, 1583
CviQI GTAC 6 cut(s) 147, 200, 846, 1326, 1421, 1583
DdeI CTNAG 8 cut(s) 116, 481, 928, 1011, 1412, 1550, 1962, 2132
DpnI GATC 6 cut(s) 114, 292, 385, 867, 981, 1381
DpnII GATC 6 cut(s) 112, 290, 383, 865, 979, 1379
DraI TTTAAA 1 cut(s) 787
DrdI GACNNNNNNGTC 1 cut(s) 1696
DseDI GACNNNNNNGTC 1 cut(s) 1696
EaeI YGGCCR 4 cut(s) 66, 871, 1002, 1025
Eam1104I CTCTTC 2 cut(s) 793, 1839
EarI CTCTTC 2 cut(s) 793, 1839
Ecl136II GAGCTC 1 cut(s) 1554
Eco130I CCWWGG 5 cut(s) 207, 277, 396, 1536, 2164
Eco24I GRGCYC 1 cut(s) 1556
Eco31I GGTCTC 1 cut(s) 1628
Eco47I GGWCC 2 cut(s) 16, 486
Eco53kI GAGCTC 1 cut(s) 1554
Eco57I CTGAAG 2 cut(s) 1679, 2120
Eco81I CCTNAGG 1 cut(s) 1011
Eco88I CYCGRG 4 cut(s) 154, 453, 1184, 1385
Eco91I GGTNACC 1 cut(s) 2011
EcoICRI GAGCTC 1 cut(s) 1554
EcoNI CCTNNNNNAGG 2 cut(s) 1540, 1865
EcoO65I GGTNACC 1 cut(s) 2011
EcoRI GAATTC 1 cut(s) 448
EcoRII CCWGG 2 cut(s) 739, 1585
EcoT14I CCWWGG 5 cut(s) 207, 277, 396, 1536, 2164
EcoT22I ATGCAT 3 cut(s) 701, 1264, 1513
EcoT38I GRGCYC 1 cut(s) 1556
ErhI CCWWGG 5 cut(s) 207, 277, 396, 1536, 2164
Esp3I CGTCTC 2 cut(s) 1929, 2128
FalI AAGNNNNNCTT 2 cut(s) 1520, 1552
FaqI GGGAC 6 cut(s) 499, 551, 658, 1128, 1507, 2067
FauNDI CATATG 2 cut(s) 1264, 1917
FblI GTMKAC 1 cut(s) 2121
Fnu4HI GCNGC 5 cut(s) 66, 167, 267, 954, 1275
FokI GGATG 6 cut(s) 343, 992, 1331, 1342, 1817, 2163
FriOI GRGCYC 1 cut(s) 1556
Fsp4HI GCNGC 5 cut(s) 66, 167, 267, 954, 1275
FspBI CTAG 1 cut(s) 1598
GlaI GCGC 1 cut(s) 2079
GluI GCNGC 5 cut(s) 66, 167, 267, 954, 1275
GsaI CCCAGC 1 cut(s) 1438
GsuI CTGGAG 1 cut(s) 1541
HaeIII GGCC 6 cut(s) 68, 873, 1004, 1027, 1561, 1755
HapII CCGG 5 cut(s) 39, 319, 489, 1028, 1747
HgaI GACGC 2 cut(s) 2069, 2138
HhaI GCGC 1 cut(s) 2080
Hin1I GRCGYC 1 cut(s) 2149
Hin6I GCGC 1 cut(s) 2078
HinP1I GCGC 1 cut(s) 2078
HindIII AAGCTT 1 cut(s) 991
HinfI GANTC 6 cut(s) 23, 91, 190, 226, 1590, 2170
HpaII CCGG 5 cut(s) 39, 319, 489, 1028, 1747
HphI GGTGA 6 cut(s) 117, 515, 753, 1201, 1899, 2023
Hpy166II GTNNAC 4 cut(s) 47, 219, 1192, 2122
Hpy188I TCNGA 7 cut(s) 90, 388, 1161, 1551, 1898, 1963, 2133
Hpy8I GTNNAC 4 cut(s) 47, 219, 1192, 2122
Hpy99I CGWCG 1 cut(s) 1943
HpyAV CCTTC 4 cut(s) 278, 366, 1099, 1703
HpyCH4III ACNGT 5 cut(s) 429, 592, 888, 1330, 1498
HpyF10VI GCNNNNNNNGC 7 cut(s) 48, 860, 1049, 1070, 1752, 1765, 2045
HpyF3I CTNAG 8 cut(s) 116, 481, 928, 1011, 1412, 1550, 1962, 2132
Hsp92I GRCGYC 1 cut(s) 2149
HspAI GCGC 1 cut(s) 2078
KroI GCCGGC 1 cut(s) 318
KroNI GCCGGC 1 cut(s) 320
Kzo9I GATC 6 cut(s) 112, 290, 383, 865, 979, 1379
LmnI GCTCC 1 cut(s) 676
Lsp1109I GCAGC 4 cut(s) 178, 278, 940, 1261
LweI GCATC 6 cut(s) 615, 708, 1112, 1364, 1498, 1795
MaeI CTAG 1 cut(s) 1598
MaeIII GTNAC 5 cut(s) 573, 759, 1648, 1687, 2011
MalI GATC 6 cut(s) 114, 292, 385, 867, 981, 1381
MboI GATC 6 cut(s) 112, 290, 383, 865, 979, 1379
MboII GAAGA 5 cut(s) 366, 810, 1150, 1856, 2113
MflI RGATCY 4 cut(s) 112, 383, 979, 1379
MhlI GDGCHC 5 cut(s) 597, 757, 1536, 1556, 1930
MlsI TGGCCA 2 cut(s) 873, 1004
MluNI TGGCCA 2 cut(s) 873, 1004
MlyI GAGTC 2 cut(s) 100, 220
MmeI TCCRAC 3 cut(s) 545, 713, 1858
Mox20I TGGCCA 2 cut(s) 873, 1004
Mph1103I ATGCAT 3 cut(s) 701, 1264, 1513
MroNI GCCGGC 1 cut(s) 318
MscI TGGCCA 2 cut(s) 873, 1004
MseI TTAA 3 cut(s) 555, 786, 1983
MslI CAYNNNNRTG 3 cut(s) 1247, 1349, 1685
Msp20I TGGCCA 2 cut(s) 873, 1004
MspI CCGG 5 cut(s) 39, 319, 489, 1028, 1747
MspR9I CCNGG 3 cut(s) 741, 1587, 1748
Mva1269I GAATGC 2 cut(s) 322, 2205
MvaI CCWGG 2 cut(s) 741, 1587
MvnI CGCG 1 cut(s) 2080
MwoI GCNNNNNNNGC 7 cut(s) 48, 860, 1049, 1070, 1752, 1765, 2045
NaeI GCCGGC 1 cut(s) 320
NciI CCSGG 1 cut(s) 1748
NcoI CCATGG 2 cut(s) 207, 277
NdeI CATATG 2 cut(s) 1264, 1917
NdeII GATC 6 cut(s) 112, 290, 383, 865, 979, 1379
NgoMIV GCCGGC 1 cut(s) 318
NlaIV GGNNCC 6 cut(s) 18, 487, 737, 1440, 1533, 1710
NmuCI GTSAC 4 cut(s) 759, 1648, 1687, 2011
NsiI ATGCAT 3 cut(s) 701, 1264, 1513
NspI RCATGY 1 cut(s) 1410
PaeI GCATGC 1 cut(s) 1410
PaeR7I CTCGAG 2 cut(s) 453, 1385
PagI TCATGA 1 cut(s) 678
PctI GAATGC 2 cut(s) 322, 2205
PdiI GCCGGC 1 cut(s) 320
PfeI GAWTC 4 cut(s) 23, 190, 1590, 2170
PkrI GCNGC 5 cut(s) 67, 168, 268, 955, 1276
PleI GAGTC 2 cut(s) 99, 220
PpsI GAGTC 2 cut(s) 99, 220
PsiI TTATAA 2 cut(s) 777, 1460
Psp124BI GAGCTC 1 cut(s) 1556
Psp6I CCWGG 2 cut(s) 739, 1585
PspEI GGTNACC 1 cut(s) 2011
PspFI CCCAGC 1 cut(s) 1434
PspGI CCWGG 2 cut(s) 739, 1585
PspN4I GGNNCC 6 cut(s) 18, 487, 737, 1440, 1533, 1710
PspPI GGNCC 3 cut(s) 16, 486, 1559
PsrI GAACNNNNNNTAC 2 cut(s) 1942, 1974
PstI CTGCAG 3 cut(s) 544, 1279, 2147
PstNI CAGNNNCTG 1 cut(s) 26
PsuI RGATCY 4 cut(s) 112, 383, 979, 1379
RsaI GTAC 6 cut(s) 148, 201, 847, 1327, 1422, 1584
RsaNI GTAC 6 cut(s) 147, 200, 846, 1326, 1421, 1583
RseI CAYNNNNRTG 3 cut(s) 1247, 1349, 1685
SacI GAGCTC 1 cut(s) 1556
SaqAI TTAA 3 cut(s) 555, 786, 1983
SatI GCNGC 5 cut(s) 66, 167, 267, 954, 1275
Sau3AI GATC 6 cut(s) 112, 290, 383, 865, 979, 1379
Sau96I GGNCC 3 cut(s) 16, 486, 1559
ScaI AGTACT 1 cut(s) 1327
SchI GAGTC 2 cut(s) 100, 220
ScrFI CCNGG 3 cut(s) 741, 1587, 1748
SduI GDGCHC 5 cut(s) 597, 757, 1536, 1556, 1930
SfaNI GCATC 6 cut(s) 615, 708, 1112, 1364, 1498, 1795
SfcI CTRYAG 3 cut(s) 540, 1275, 2143
Sfr274I CTCGAG 2 cut(s) 453, 1385
SinI GGWCC 2 cut(s) 16, 486
SlaI CTCGAG 2 cut(s) 453, 1385
SmiMI CAYNNNNRTG 3 cut(s) 1247, 1349, 1685
SmlI CTYRAG 4 cut(s) 360, 453, 1385, 2021
SmoI CTYRAG 4 cut(s) 360, 453, 1385, 2021
SphI GCATGC 1 cut(s) 1410
SsiI CCGC 3 cut(s) 42, 65, 1452
SspMI CTAG 1 cut(s) 1598
SstI GAGCTC 1 cut(s) 1556
StyD4I CCNGG 3 cut(s) 739, 1585, 1746
StyI CCWWGG 5 cut(s) 207, 277, 396, 1536, 2164
TaaI ACNGT 5 cut(s) 429, 592, 888, 1330, 1498
TaqI TCGA 5 cut(s) 454, 1237, 1386, 1998, 2190
TatI WGTACW 3 cut(s) 146, 1325, 1420
TauI GCSGC 1 cut(s) 68
TfiI GAWTC 4 cut(s) 23, 190, 1590, 2170
Tru1I TTAA 3 cut(s) 555, 786, 1983
Tru9I TTAA 3 cut(s) 555, 786, 1983
TscAI CASTG 8 cut(s) 709, 1112, 1249, 1284, 1728, 1973, 1999, 2190
TseFI GTSAC 4 cut(s) 759, 1648, 1687, 2011
TseI GCWGC 4 cut(s) 166, 266, 953, 1274
Tsp45I GTSAC 4 cut(s) 759, 1648, 1687, 2011
TspDTI ATGAA 6 cut(s) 68, 297, 1024, 1282, 1658, 1693
TspGWI ACGGA 1 cut(s) 2152
TspRI CASTG 8 cut(s) 709, 1112, 1249, 1284, 1728, 1973, 1999, 2190
VpaK11BI GGWCC 2 cut(s) 16, 486
XagI CCTNNNNNAGG 2 cut(s) 1540, 1865
XapI RAATTY 3 cut(s) 55, 448, 1823
XceI RCATGY 1 cut(s) 1410
XcmI CCANNNNNNNNNTGG 2 cut(s) 284, 973
XhoI CTCGAG 2 cut(s) 453, 1385
XmiI GTMKAC 1 cut(s) 2121
XspI CTAG 1 cut(s) 1598
ZrmI AGTACT 1 cut(s) 1327
Zsp2I ATGCAT 3 cut(s) 701, 1264, 1513
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.