FvH4_3g36930
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Reverse (-)
31609336 .. 31613511
4176 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g36930.t1

Sequence Viewer

Length: 1299 bp
ATGTCCGCTGAGCTTAGTGGCACAAGTTGGTTTAATCTGACAGCTGTTCAGCTTGGTCTTGTGGTTAGTGGTTCCCTCTACGGAGCTCTTTTTGGTTCTCTCCTTGTCTACCCAATTGCTGATTTCCTTGGAAGGAGGAGAGAACTCATCATAGCTGCTACACTTTATCTCCTTGGGGGTCTGATCACTGGATGTGCTCCAGGCCTTGGTGTTCTATTAGTAGGCCGTGTTTTATATGGCATCGGCATCGGCATGGCCATGCATGGGGCTCCACTCTATATTGCTGAAACATGTCCATCTCAAATTCGCGGAACTCTAGTGTCATTGAAGGAGCTCTTCATAGTTTTGGGGATCCTGTTGGGTTATTTAGTAGGAAGCTTTCAGATTGATGCAATTGGGGGGTGGCGTTACATGTATGGAATAAGTGCACCCATTGCTTTACTTATGGGAATAGGCATGTGGATTCTCCCACCATCTCCTCGATGGTTGCTTCTCAGGCCAGCTCAAGGTAAAGGGTCTGTGAAAGAATACAAAGAAAAAGCTGTTCTTGCCTTGAGCAAGTTGAGAGGCCGGCCTCCTGGTGACAGAGTGTCTGAAAAACAAATAGAAGAGACTTTTGTTACTTTGAAGTCATCCTATGCAGATGAGGAATCAGAGGGGAGTTTGATGGAGATCTTTCAAGGCCCAAGTTTGAAGGCCTTCATAATTGCTGGGGGTTTAGTCCTTTTTCAACAAATAACAGGGCAACCAAGTGTCCTATATTACGCAGGTCCAATTCTTCAGAGTGCAGGATTCTCCGCTGCTGCTGATGCTACCAAAGTATCGGTTATAATTGGGTTGTTCAAGTTCGTGATGACAGGGGTAGCTGTCCTGAAAGTTGATGATCTAGGAAGAAGACCTTTGCTGATACTAGGAGTCAGTGGTCTTGCTCTTTCCTTGTTTCTCCTCTCTGCTTACTACAAATTTCTTGGGGGGTTCCCACTAGTTGCTGTAGCTTCTCTTCTTCTCTATGTTGGTTGCTACCAGATATCTTTTGGTCCTATAAGTTGGCTTATGGTGTCTGAAATATTCCCGCTTCGCACAAGAGGAAAAGGGATTAGTCTTGCAGTTCTTACTAACTTCGGTTCAAATGCCCTTGTTACATTTGCATTCTCACCATTGAAGGAGGCACTAGGAGCAGACAACCTTTTCCTCCTTTTTGGGGCTATCGCCTTGATATCTCTTCTGTTTGTTGTGCTAATCGTCCCAGAAACCAAAGGTTTGAGTTTGGAAGAAATAGAATCCAAACTCTTGAAATAG

Protein Analysis

433

Amino Acids

46.1

Weight (kDa)

9.05

Isoelectric Point (pI)

37.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 11 - 379 9.7e-30 Major Facilitator Superfamily
Sugar_tr PF00083 14 - 428 9.9e-94 Sugar (and other) transporter
MFS_1 PF07690 293 - 420 6.7e-06 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010727)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 830
Acc36I ACCTGC 1 cut(s) 758
AccB7I CCANNNNNTGG 1 cut(s) 206
AccI GTMKAC 1 cut(s) 108
AccII CGCG 1 cut(s) 309
AciI CCGC 4 cut(s) 6, 309, 798, 1073
AclWI GGATC 2 cut(s) 346, 359
AcoI YGGCCR 1 cut(s) 255
AcsI RAATTY 2 cut(s) 303, 962
AcuI CTGAAG 1 cut(s) 764
AfiI CCNNNNNNNGG 4 cut(s) 206, 264, 506, 1201
AflIII ACRYGT 2 cut(s) 290, 411
AgsI TTSAA 9 cut(s) 328, 628, 680, 694, 731, 844, 1128, 1162, 1294
AhdI GACNNNNNGTC 1 cut(s) 589
AhlI ACTAGT 1 cut(s) 982
AjnI CCWGG 2 cut(s) 199, 577
Alw21I GWGCWC 4 cut(s) 88, 199, 336, 430
Alw26I GTCTC 1 cut(s) 605
Alw44I GTGCAC 1 cut(s) 426
AlwI GGATC 2 cut(s) 346, 359
AoxI GGCC 8 cut(s) 202, 223, 255, 497, 568, 572, 682, 696
ApaLI GTGCAC 1 cut(s) 426
ApeKI GCWGC 3 cut(s) 155, 800, 803
ApoI RAATTY 2 cut(s) 303, 962
Asp700I GAANNNNTTC 1 cut(s) 698
AspS9I GGNCC 3 cut(s) 683, 770, 1037
AsuHPI GGTGA 2 cut(s) 593, 1146
AvaII GGWCC 2 cut(s) 770, 1037
BaeGI GKGCMC 1 cut(s) 430
BaeI ACNNNNGTAYC 2 cut(s) 804, 837
BalI TGGCCA 1 cut(s) 257
BamHI GGATCC 1 cut(s) 351
BanII GRGCYC 3 cut(s) 88, 271, 336
BarI GAAGNNNNNNTAC 2 cut(s) 984, 1016
BbsI GAAGAC 1 cut(s) 901
Bbv12I GWGCWC 4 cut(s) 88, 199, 336, 430
BbvI GCAGC 3 cut(s) 142, 787, 790
BccI CCATC 4 cut(s) 304, 477, 481, 661
BceAI ACGGC 1 cut(s) 210
BcgI CGANNNNNNTGC 2 cut(s) 229, 263
BciT130I CCWGG 2 cut(s) 201, 579
BclI TGATCA 1 cut(s) 183
BcoDI GTCTC 1 cut(s) 605
BcuI ACTAGT 1 cut(s) 982
BfaI CTAG 5 cut(s) 317, 887, 911, 983, 1172
BfmI CTRYAG 1 cut(s) 990
BfuAI ACCTGC 1 cut(s) 758
BglII AGATCT 1 cut(s) 672
BisI GCNGC 3 cut(s) 156, 801, 804
BlpI GCTNAGC 1 cut(s) 9
BlsI GCNGC 3 cut(s) 157, 802, 805
Bme1390I CCNGG 2 cut(s) 201, 579
Bme18I GGWCC 2 cut(s) 770, 1037
BmeRI GACNNNNNGTC 1 cut(s) 589
BmgT120I GGNCC 3 cut(s) 683, 770, 1037
BmiI GGNNCC 4 cut(s) 73, 270, 353, 977
BmrFI CCNGG 2 cut(s) 201, 579
BmsI GCATC 4 cut(s) 249, 255, 379, 799
BpiI GAAGAC 1 cut(s) 901
BpmI CTGGAG 1 cut(s) 183
Bpu1102I GCTNAGC 1 cut(s) 9
BpuEI CTTGAG 2 cut(s) 489, 574
BsaBI GATNNNNATC 1 cut(s) 671
BsaJI CCNNGG 3 cut(s) 127, 172, 205
BsaXI ACNNNNNCTCC 2 cut(s) 153, 183
Bsc4I CCNNNNNNNGG 4 cut(s) 206, 264, 506, 1201
Bse118I RCCGGY 1 cut(s) 570
Bse1I ACTGG 1 cut(s) 193
Bse3DI GCAATG 1 cut(s) 432
Bse8I GATNNNNATC 1 cut(s) 671
BseBI CCWGG 2 cut(s) 201, 579
BseDI CCNNGG 3 cut(s) 127, 172, 205
BseGI GGATG 2 cut(s) 197, 632
BseJI GATNNNNATC 1 cut(s) 671
BseLI CCNNNNNNNGG 4 cut(s) 206, 264, 506, 1201
BseMI GCAATG 1 cut(s) 432
BseMII CTCAG 1 cut(s) 508
BseNI ACTGG 1 cut(s) 193
BseRI GAGGAG 3 cut(s) 151, 468, 935
BseSI GKGCMC 1 cut(s) 430
BseXI GCAGC 3 cut(s) 142, 787, 790
BseYI CCCAGC 1 cut(s) 710
BsgI GTGCAG 1 cut(s) 807
Bsh1236I CGCG 1 cut(s) 309
BshFI GGCC 8 cut(s) 204, 225, 257, 499, 570, 574, 684, 698
BsiHKAI GWGCWC 4 cut(s) 88, 199, 336, 430
BsiSI CCGG 1 cut(s) 571
BslFI GGGAC 1 cut(s) 1229
BslI CCNNNNNNNGG 4 cut(s) 206, 264, 506, 1201
BsmAI GTCTC 1 cut(s) 605
BsmFI GGGAC 1 cut(s) 1229
BsmI GAATGC 1 cut(s) 1148
BsnI GGCC 8 cut(s) 204, 225, 257, 499, 570, 574, 684, 698
Bsp1286I GDGCHC 5 cut(s) 88, 199, 271, 336, 430
Bsp143I GATC 4 cut(s) 183, 351, 672, 883
Bsp1720I GCTNAGC 1 cut(s) 9
BspACI CCGC 4 cut(s) 6, 309, 798, 1073
BspANI GGCC 8 cut(s) 204, 225, 257, 499, 570, 574, 684, 698
BspCNI CTCAG 1 cut(s) 507
BspFNI CGCG 1 cut(s) 309
BspLI GGNNCC 4 cut(s) 73, 270, 353, 977
BspMI ACCTGC 1 cut(s) 758
BspPI GGATC 2 cut(s) 346, 359
BspQI GCTCTTC 1 cut(s) 341
BsrDI GCAATG 1 cut(s) 432
BsrFI RCCGGY 1 cut(s) 570
BsrI ACTGG 1 cut(s) 193
BssAI RCCGGY 1 cut(s) 570
BssECI CCNNGG 3 cut(s) 127, 172, 205
BssMI GATC 4 cut(s) 183, 351, 672, 883
BssT1I CCWWGG 3 cut(s) 127, 172, 205
Bst2UI CCWGG 2 cut(s) 201, 579
Bst6I CTCTTC 4 cut(s) 341, 603, 1005, 1227
BstAPI GCANNNNNTGC 1 cut(s) 434
BstC8I GCNNGC 2 cut(s) 501, 572
BstDEI CTNAG 3 cut(s) 9, 14, 494
BstF5I GGATG 2 cut(s) 197, 632
BstFNI CGCG 1 cut(s) 309
BstKTI GATC 4 cut(s) 186, 354, 675, 886
BstMAI GTCTC 1 cut(s) 605
BstMBI GATC 4 cut(s) 183, 351, 672, 883
BstMWI GCNNNNNNNGC 5 cut(s) 434, 496, 548, 809, 1175
BstNI CCWGG 2 cut(s) 201, 579
BstNSI RCATGY 3 cut(s) 294, 415, 460
BstSCI CCNGG 2 cut(s) 199, 577
BstSFI CTRYAG 1 cut(s) 990
BstSLI GKGCMC 1 cut(s) 430
BstUI CGCG 1 cut(s) 309
BstV1I GCAGC 3 cut(s) 142, 787, 790
BstV2I GAAGAC 1 cut(s) 901
BstX2I RGATCY 2 cut(s) 351, 672
BstYI RGATCY 2 cut(s) 351, 672
BsuRI GGCC 8 cut(s) 204, 225, 257, 499, 570, 574, 684, 698
BtsCI GGATG 2 cut(s) 197, 632
BtsIMutI CAGTG 2 cut(s) 186, 925
BveI ACCTGC 1 cut(s) 758
Cac8I GCNNGC 2 cut(s) 501, 572
Cfr10I RCCGGY 1 cut(s) 570
Cfr13I GGNCC 3 cut(s) 683, 770, 1037
CviAII CATG 6 cut(s) 253, 259, 263, 291, 412, 457
DdeI CTNAG 3 cut(s) 9, 14, 494
DpnI GATC 4 cut(s) 185, 353, 674, 885
DpnII GATC 4 cut(s) 183, 351, 672, 883
DriI GACNNNNNGTC 1 cut(s) 589
EaeI YGGCCR 1 cut(s) 255
Eam1104I CTCTTC 4 cut(s) 341, 603, 1005, 1227
Eam1105I GACNNNNNGTC 1 cut(s) 589
EarI CTCTTC 4 cut(s) 341, 603, 1005, 1227
Ecl136II GAGCTC 2 cut(s) 86, 334
Eco130I CCWWGG 3 cut(s) 127, 172, 205
Eco147I AGGCCT 2 cut(s) 204, 698
Eco24I GRGCYC 3 cut(s) 88, 271, 336
Eco32I GATATC 2 cut(s) 1029, 1218
Eco47I GGWCC 2 cut(s) 770, 1037
Eco53kI GAGCTC 2 cut(s) 86, 334
Eco57I CTGAAG 1 cut(s) 764
EcoICRI GAGCTC 2 cut(s) 86, 334
EcoRII CCWGG 2 cut(s) 199, 577
EcoRV GATATC 2 cut(s) 1029, 1218
EcoT14I CCWWGG 3 cut(s) 127, 172, 205
EcoT22I ATGCAT 1 cut(s) 264
EcoT38I GRGCYC 3 cut(s) 88, 271, 336
ErhI CCWWGG 3 cut(s) 127, 172, 205
FaeI CATG 6 cut(s) 256, 262, 266, 294, 415, 460
FalI AAGNNNNNCTT 6 cut(s) 320, 352, 531, 563, 883, 915
FaqI GGGAC 1 cut(s) 1229
FatI CATG 6 cut(s) 252, 258, 262, 290, 411, 456
FauI CCCGC 1 cut(s) 1080
FbaI TGATCA 1 cut(s) 183
FblI GTMKAC 1 cut(s) 108
Fnu4HI GCNGC 3 cut(s) 156, 801, 804
FokI GGATG 2 cut(s) 204, 619
FriOI GRGCYC 3 cut(s) 88, 271, 336
FseI GGCCGGCC 1 cut(s) 574
Fsp4HI GCNGC 3 cut(s) 156, 801, 804
FspBI CTAG 5 cut(s) 317, 887, 911, 983, 1172
GluI GCNGC 3 cut(s) 156, 801, 804
GsaI CCCAGC 1 cut(s) 714
GsuI CTGGAG 1 cut(s) 183
HaeIII GGCC 8 cut(s) 204, 225, 257, 499, 570, 574, 684, 698
HapII CCGG 1 cut(s) 571
Hin1II CATG 6 cut(s) 256, 262, 266, 294, 415, 460
HindIII AAGCTT 1 cut(s) 376
HinfI GANTC 5 cut(s) 463, 650, 792, 915, 1280
HpaII CCGG 1 cut(s) 571
HphI GGTGA 2 cut(s) 593, 1146
Hpy166II GTNNAC 2 cut(s) 109, 428
Hpy188I TCNGA 7 cut(s) 39, 183, 384, 595, 655, 783, 1063
Hpy188III TCNNGA 3 cut(s) 850, 871, 1291
Hpy8I GTNNAC 2 cut(s) 109, 428
HpyAV CCTTC 5 cut(s) 126, 322, 688, 709, 1156
HpyCH4V TGCA 7 cut(s) 262, 392, 428, 641, 788, 1106, 1148
HpyF10VI GCNNNNNNNGC 5 cut(s) 434, 496, 548, 809, 1175
HpyF3I CTNAG 3 cut(s) 9, 14, 494
Hsp92II CATG 6 cut(s) 256, 262, 266, 294, 415, 460
KroI GCCGGC 1 cut(s) 570
KroNI GCCGGC 1 cut(s) 572
Ksp22I TGATCA 1 cut(s) 183
Kzo9I GATC 4 cut(s) 183, 351, 672, 883
LguI GCTCTTC 1 cut(s) 341
LmnI GCTCC 5 cut(s) 83, 202, 274, 331, 1175
Lsp1109I GCAGC 3 cut(s) 142, 787, 790
LweI GCATC 4 cut(s) 249, 255, 379, 799
MaeI CTAG 5 cut(s) 317, 887, 911, 983, 1172
MaeIII GTNAC 4 cut(s) 407, 581, 619, 1138
MalI GATC 4 cut(s) 185, 353, 674, 885
MboI GATC 4 cut(s) 183, 351, 672, 883
MboII GAAGA 9 cut(s) 328, 620, 770, 903, 906, 992, 995, 1214, 1283
MfeI CAATTG 2 cut(s) 114, 393
MflI RGATCY 2 cut(s) 351, 672
MhlI GDGCHC 5 cut(s) 88, 199, 271, 336, 430
MlsI TGGCCA 1 cut(s) 257
MluCI AATT 7 cut(s) 114, 303, 393, 705, 774, 831, 962
MluNI TGGCCA 1 cut(s) 257
MlyI GAGTC 1 cut(s) 924
Mox20I TGGCCA 1 cut(s) 257
Mph1103I ATGCAT 1 cut(s) 264
MroNI GCCGGC 1 cut(s) 570
MroXI GAANNNNTTC 1 cut(s) 698
MscI TGGCCA 1 cut(s) 257
MseI TTAA 1 cut(s) 33
MslI CAYNNNNRTG 2 cut(s) 251, 257
Msp20I TGGCCA 1 cut(s) 257
MspA1I CMGCKG 3 cut(s) 8, 44, 800
MspI CCGG 1 cut(s) 571
MspR9I CCNGG 2 cut(s) 201, 579
MunI CAATTG 2 cut(s) 114, 393
Mva1269I GAATGC 1 cut(s) 1148
MvaI CCWGG 2 cut(s) 201, 579
MvnI CGCG 1 cut(s) 309
MwoI GCNNNNNNNGC 5 cut(s) 434, 496, 548, 809, 1175
NaeI GCCGGC 1 cut(s) 572
NdeII GATC 4 cut(s) 183, 351, 672, 883
NgoMIV GCCGGC 1 cut(s) 570
NlaIII CATG 6 cut(s) 256, 262, 266, 294, 415, 460
NlaIV GGNNCC 4 cut(s) 73, 270, 353, 977
NmuCI GTSAC 1 cut(s) 581
NsiI ATGCAT 1 cut(s) 264
NspI RCATGY 3 cut(s) 294, 415, 460
PceI AGGCCT 2 cut(s) 204, 698
PciI ACATGT 2 cut(s) 290, 411
PciSI GCTCTTC 1 cut(s) 341
PctI GAATGC 1 cut(s) 1148
PdiI GCCGGC 1 cut(s) 572
PdmI GAANNNNTTC 1 cut(s) 698
PfeI GAWTC 4 cut(s) 463, 650, 792, 1280
PflMI CCANNNNNTGG 1 cut(s) 206
PkrI GCNGC 3 cut(s) 157, 802, 805
PleI GAGTC 1 cut(s) 923
PpsI GAGTC 1 cut(s) 923
PscI ACATGT 2 cut(s) 290, 411
PsiI TTATAA 1 cut(s) 830
Psp124BI GAGCTC 2 cut(s) 88, 336
Psp6I CCWGG 2 cut(s) 199, 577
PspFI CCCAGC 1 cut(s) 710
PspGI CCWGG 2 cut(s) 199, 577
PspN4I GGNNCC 4 cut(s) 73, 270, 353, 977
PspPI GGNCC 3 cut(s) 683, 770, 1037
PsuI RGATCY 2 cut(s) 351, 672
PvuII CAGCTG 1 cut(s) 44
RigI GGCCGGCC 1 cut(s) 574
RseI CAYNNNNRTG 2 cut(s) 251, 257
SacI GAGCTC 2 cut(s) 88, 336
SapI GCTCTTC 1 cut(s) 341
SaqAI TTAA 1 cut(s) 33
SatI GCNGC 3 cut(s) 156, 801, 804
Sau3AI GATC 4 cut(s) 183, 351, 672, 883
Sau96I GGNCC 3 cut(s) 683, 770, 1037
SchI GAGTC 1 cut(s) 924
ScrFI CCNGG 2 cut(s) 201, 579
SduI GDGCHC 5 cut(s) 88, 199, 271, 336, 430
SfaNI GCATC 4 cut(s) 249, 255, 379, 799
SfcI CTRYAG 1 cut(s) 990
SinI GGWCC 2 cut(s) 770, 1037
SmiMI CAYNNNNRTG 2 cut(s) 251, 257
SmlI CTYRAG 2 cut(s) 504, 553
SmoI CTYRAG 2 cut(s) 504, 553
SpeI ACTAGT 1 cut(s) 982
Sse9I AATT 7 cut(s) 114, 303, 393, 705, 774, 831, 962
SseBI AGGCCT 2 cut(s) 204, 698
SsiI CCGC 4 cut(s) 6, 309, 798, 1073
SspI AATATT 1 cut(s) 1068
SspMI CTAG 5 cut(s) 317, 887, 911, 983, 1172
SstI GAGCTC 2 cut(s) 88, 336
StuI AGGCCT 2 cut(s) 204, 698
StyD4I CCNGG 2 cut(s) 199, 577
StyI CCWWGG 3 cut(s) 127, 172, 205
TaqI TCGA 1 cut(s) 481
TasI AATT 7 cut(s) 114, 303, 393, 705, 774, 831, 962
TfiI GAWTC 4 cut(s) 463, 650, 792, 1280
Tru1I TTAA 1 cut(s) 33
Tru9I TTAA 1 cut(s) 33
TscAI CASTG 2 cut(s) 193, 925
TseFI GTSAC 1 cut(s) 581
TseI GCWGC 3 cut(s) 155, 800, 803
Tsp45I GTSAC 1 cut(s) 581
TspDTI ATGAA 2 cut(s) 328, 691
TspGWI ACGGA 1 cut(s) 96
TspRI CASTG 2 cut(s) 193, 925
Van91I CCANNNNNTGG 1 cut(s) 206
VneI GTGCAC 1 cut(s) 426
VpaK11BI GGWCC 2 cut(s) 770, 1037
XapI RAATTY 2 cut(s) 303, 962
XceI RCATGY 3 cut(s) 294, 415, 460
XcmI CCANNNNNNNNNTGG 2 cut(s) 480, 1031
XmiI GTMKAC 1 cut(s) 108
XmnI GAANNNNTTC 1 cut(s) 698
XspI CTAG 5 cut(s) 317, 887, 911, 983, 1172
Zsp2I ATGCAT 1 cut(s) 264
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.